View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1913_high_67 (Length: 244)
Name: NF1913_high_67
Description: NF1913
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1913_high_67 |
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Alignment Details
Target: chr5 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 19789915 - 19789689
Alignment:
| Q |
1 |
catttcaacatactttgggtttcctttcgattcagaagtcttattttaaatcttttgcacttgcagactggtctttcagtttatgctcatcaagggcaag |
100 |
Q |
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| T |
19789915 |
catttcaacatactt-gggtttcctttctattcagaagtcttattttaaaccttttgcacttgcagactggtctttcagtttatgctcatcaagggcaag |
19789817 |
T |
|
| Q |
101 |
tgagtccaaaggatattgaattctgtcgaaatcgtagtcctgacacaacaaaattagaccttgagacacccaccatcagcagtttttcagccaagtcatt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
19789816 |
tgagtccaaaggatattgaattctgtcgaaatcgtagtcctgacacaacaaaattagaccttgagacacccaccatcagcagtttttcagccaagtcatt |
19789717 |
T |
|
| Q |
201 |
gtgtatttttcatgttctcaattggcaa |
228 |
Q |
| |
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|||||||||||||||||||||||||||| |
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| T |
19789716 |
gtgtatttttcatgttctcaattggcaa |
19789689 |
T |
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