View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1913_high_85 (Length: 223)
Name: NF1913_high_85
Description: NF1913
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1913_high_85 |
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Alignment Details
Target: chr3 (Bit Score: 203; Significance: 1e-111; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 1 - 211
Target Start/End: Original strand, 52797537 - 52797747
Alignment:
| Q |
1 |
tataatttgggttcatatcacatcgcatatgcatatgtcgtcataggatcattcaagcctaacctcgtccaactcgatgctgccaaaatttcttggtcat |
100 |
Q |
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| T |
52797537 |
tataatttgggttcatatcacatcgcatatgcatatgacgtcataggatcattcaagcctaacctcgtccaactcgatgctgccaaaatttcttggtcat |
52797636 |
T |
|
| Q |
101 |
cgtcccagacaattgcactgagcccccaagtaccatccggcgataaattcccatcactgttagctttaaatatcccatttctcagtttttgctatttttc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
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| T |
52797637 |
cgtcccagacaattgcactgagcccccaagtaccatccggcgataaattcccatcactgttagcgttaaatatcccatttctcagtttttgctatttttc |
52797736 |
T |
|
| Q |
201 |
atgctgatatt |
211 |
Q |
| |
|
||||||||||| |
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| T |
52797737 |
atgctgatatt |
52797747 |
T |
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