View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1913_low_74 (Length: 242)
Name: NF1913_low_74
Description: NF1913
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1913_low_74 |
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Alignment Details
Target: chr7 (Bit Score: 168; Significance: 4e-90; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 7706831 - 7707062
Alignment:
| Q |
1 |
cataaattaaattaactaatgtatttggacattttcctaataaactttctaagtttcttgacagaaaatccaaa-----ctccattacgctttgttgagt |
95 |
Q |
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| T |
7706831 |
cataaattaaattaactaatgtatttggacatttttctaataaactttctatgtttcttgacagaaaatccaaattaaactccattactctttgttgagt |
7706930 |
T |
|
| Q |
96 |
ttcacccttcaggactgcgtattatatgtgcagttgcaagagtagttaaatttagctagaggacttccaataaattaaatgaattccacgaggtatttga |
195 |
Q |
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||||||||||| || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7706931 |
ttcacccttcatgattgcgtattatttgtgcagttgcaagagtagttaaatttagctagaggacttccaataaattaaatgaattccacgaggtatttgg |
7707030 |
T |
|
| Q |
196 |
acggccaaataatgtcttaagggatttggtca |
227 |
Q |
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| | |||||| |||||||||||||||||||| |
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| T |
7707031 |
aagaccaaatgttgtcttaagggatttggtca |
7707062 |
T |
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