View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF19141_high_15 (Length: 336)
Name: NF19141_high_15
Description: NF19141
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19141_high_15 |
 |  |
|
| [»] chr2 (4 HSPs) |
 |  |
|
Alignment Details
Target: chr2 (Bit Score: 255; Significance: 1e-142; HSPs: 4)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 18 - 336
Target Start/End: Original strand, 11994996 - 11995305
Alignment:
| Q |
18 |
aaagaagtgcggacctgaacaacgttctgcaccttcacccaacaacagcttttcgagtgaagagaaatttggatttggatggaaaatggtggcaattgga |
117 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
11994996 |
aaagaagtgcggacctgaacaacgttctccaccttcacccaacaacagcttttcgagtgaagagaaatttggatttggatggaaaccagtggcaattgga |
11995095 |
T |
 |
| Q |
118 |
tatggatgtggatttgtgattggaataggcctcggatattgcatgtttttaattggaaagtctagatggcttgtgatgatatttggtggtcagcctaaaa |
217 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11995096 |
tatggatgtggatttgtgattggaataggcctcggatattgtatgtttttaattggaaagcctagatggcttgtgatgatatttggtggtcagcctaaaa |
11995195 |
T |
 |
| Q |
218 |
gaagagtgaaaaggagagcaagagtgagtaggaaccatggtgcaaccatgaatcagaatcaaatggtggcaatgtcgtagtcttattgttgtttgtggtt |
317 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||| |
|
|
| T |
11995196 |
gaagagtgaaaaggagaacaagagtgagtaggaaccatggtgcaaccatgaatcagaatca---------aatgtcttagtcttattgttgtttgtggtt |
11995286 |
T |
 |
| Q |
318 |
attttctctattgtgtgtt |
336 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
11995287 |
attttctctattgtgtgtt |
11995305 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 18 - 336
Target Start/End: Complemental strand, 12247934 - 12247623
Alignment:
| Q |
18 |
aaagaagtgcggacctgaacaacgttctgcaccttcacccaacaacagcttttcgagtgaagagaaatttggatttggatggaaaatggtggcaattgga |
117 |
Q |
| |
|
||||||||| |||||||||||| |||| |||||||| ||||||||||||| ||| || | |||||||||||||||||||||| ||||||||||||| |
|
|
| T |
12247934 |
aaagaagtgtggacctgaacaatattctcaaccttcacttaacaacagcttttggagcgacgcgaaatttggatttggatggaaaccggtggcaattgga |
12247835 |
T |
 |
| Q |
118 |
tatggatgtggatttgtgattggaataggcctcggatattgcatgtttttaattggaaagtctagatggcttgtgatgatatttggtggtcagcctaaaa |
217 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12247834 |
tatggatgtggatttgtgattggaataggcctcggatattgtatgtttttaattggaaagcctagatggcttgtgatgatatttggtggtcagcctaaaa |
12247735 |
T |
 |
| Q |
218 |
gaagagtgaaaaggagagcaagagtgagtaggaaccatggtgcaaccatgaatcagaatcaaatggtggcaatgtcgtagtcttattgttgtttgtggtt |
317 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
12247734 |
gaagagtgaaaaggagaacaagagtgagtaggaaccatggtgcaaccatgaatcagaatcaaatggtggcaatgtcgtagtctt-------gttgtggtt |
12247642 |
T |
 |
| Q |
318 |
attttctctattgtgtgtt |
336 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
12247641 |
attttctctattgtgtgtt |
12247623 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 113 - 229
Target Start/End: Original strand, 32682381 - 32682497
Alignment:
| Q |
113 |
ttggatatggatgtggatttgtgattggaataggcctcggatattgcatgtttttaattggaaagtctagatggcttgtgatgatatttggtggtcagcc |
212 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| | ||||| | |||||||||||||||||| |||||||||||||||||||| |||||||||| || |
|
|
| T |
32682381 |
ttggatatggatgtggatttgtgattggaataggcattggatactttatgtttttaattggaaagcctagatggcttgtgatgataattggtggtcatcc |
32682480 |
T |
 |
| Q |
213 |
taaaagaagagtgaaaa |
229 |
Q |
| |
|
||| ||||||||||||| |
|
|
| T |
32682481 |
taagagaagagtgaaaa |
32682497 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 75 - 197
Target Start/End: Original strand, 9423384 - 9423506
Alignment:
| Q |
75 |
tgaagagaaatttggatttggatggaaaatggtggcaattggatatggatgtggatttgtgattggaataggcctcggatattgcatgtttttaattgga |
174 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||||||||||||||||| | ||| |||||| |||||| |||| ||| ||| | ||||||||| |
|
|
| T |
9423384 |
tgaagagaaatttggatttggatggaaatcagtggcaattggatatggatgtggaatggtgcttggaaaaggccttggatgttgtatgctgttaattgga |
9423483 |
T |
 |
| Q |
175 |
aagtctagatggcttgtgatgat |
197 |
Q |
| |
|
||| ||||||||| ||||||||| |
|
|
| T |
9423484 |
aagcctagatggcctgtgatgat |
9423506 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 159; Significance: 1e-84; HSPs: 8)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 28 - 278
Target Start/End: Complemental strand, 42117217 - 42116967
Alignment:
| Q |
28 |
ggacctgaacaacgttctgcaccttcacccaacaacagcttttcgagtgaagagaaatttggatttggatggaaaatggtggcaattggatatggatgtg |
127 |
Q |
| |
|
||||||||||| | |||| || |||| ||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
42117217 |
ggacctgaacatcattctccaatttcagccaacaacagcttttgcagtgaagagaaatttggatttggatggaaagcagtggcaattggatatggatgtg |
42117118 |
T |
 |
| Q |
128 |
gatttgtgattggaataggcctcggatattgcatgtttttaattggaaagtctagatggcttgtgatgatatttggtggtcagcctaaaagaagagtgaa |
227 |
Q |
| |
|
|||||||||||||||||||| | ||||||| |||||||||||||||||| |||||||| |||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
42117117 |
gatttgtgattggaataggcattggatattttatgtttttaattggaaagcctagatggattgtgatgatatttggtggtcagcctaagagaagagtgaa |
42117018 |
T |
 |
| Q |
228 |
aaggagagcaagagtgagtaggaaccatggtgcaaccatgaatcagaatca |
278 |
Q |
| |
|
||| ||| ||||| |||| |||||||||||| ||||||||||||||||||| |
|
|
| T |
42117017 |
aagaagaacaagaatgagaaggaaccatggtacaaccatgaatcagaatca |
42116967 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 59 - 333
Target Start/End: Complemental strand, 42128332 - 42128062
Alignment:
| Q |
59 |
acaacagcttttcgagtgaagagaaatttggatttggatggaaaatggtggcaattggatatggatgtggatttgtgattggaataggcctcggatattg |
158 |
Q |
| |
|
|||||| || || |||||||||||||||| |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||| | ||||||| |
|
|
| T |
42128332 |
acaacaactcttggagtgaagagaaatttagatttggatggaaaccagtggcgattggatatggatgtggatttgtgattggaataggcattggatatta |
42128233 |
T |
 |
| Q |
159 |
catgtttttaattggaaagtctagatggcttgtgatgatatttggtggtcagcctaaaagaagagtgaaaaggagagcaagagtgagtaggaaccatggt |
258 |
Q |
| |
|
||||||||||||| |||||||||||||||||| ||||||||||||||||||||||| |||||||||| ||||||| |||||||||| ||| |||||| |
|
|
| T |
42128232 |
tatgtttttaattgaaaagtctagatggcttgttatgatatttggtggtcagcctaagagaagagtgacaaggagaacaagagtgaggagggcacatggt |
42128133 |
T |
 |
| Q |
259 |
gcaaccatgaatcagaatcaaatggtggcaatgtcgtagtcttattgttgtttgtggttattttctctattgtgt |
333 |
Q |
| |
|
||||||||||||||||||| |||||| |||||| |||| |||||| || | ||||||||||||||||||| |
|
|
| T |
42128132 |
tcaaccatgaatcagaatcagatggtgcaaatgtcatagttttattg----ttctagttattttctctattgtgt |
42128062 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 28 - 309
Target Start/End: Complemental strand, 42122965 - 42122687
Alignment:
| Q |
28 |
ggacctgaacaacgttctgcaccttcacccaacaacagcttttcgagtgaagagaaatttggatttggatggaaaatggtggcaattggatatggatgtg |
127 |
Q |
| |
|
||||||||||||| |||| |||||||| |||| ||| | || |||||||||||||||| |||||||||||||| ||||| |||||||||||||||| |
|
|
| T |
42122965 |
ggacctgaacaacattctccaccttcagccaagaac---tcttggagtgaagagaaatttagatttggatggaaaccagtggcgattggatatggatgtg |
42122869 |
T |
 |
| Q |
128 |
gatttgtgattggaataggcctcggatattgcatgtttttaattggaaagtctagatggcttgtgatgatatttggtggtcagcctaaaagaagagtgaa |
227 |
Q |
| |
|
||||||||||||||||| || | ||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||| |||||| |||||||||| |
|
|
| T |
42122868 |
gatttgtgattggaatatgcattggatattatatgtttttaattggaaagcctagatggcttgtcatgatatttggtggtccgcctaagagaagagtgac |
42122769 |
T |
 |
| Q |
228 |
aaggagagcaagagtgagtaggaaccatggtgcaaccatgaatcagaatcaaatggtggcaatgtcgtagtcttattgttgt |
309 |
Q |
| |
|
||||||| |||||||||| ||| |||||| ||||||||||||||||||| |||||| |||||| |||| |||||||||| |
|
|
| T |
42122768 |
aaggagaacaagagtgaggagggcacatggttcaaccatgaatcagaatcagatggtgcaaatgtcatagttttattgttgt |
42122687 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 18 - 274
Target Start/End: Original strand, 34233388 - 34233641
Alignment:
| Q |
18 |
aaagaagtgcggacctgaacaacgttctgcaccttcacccaacaacagcttttcgagtgaagagaaatttggatttggatggaaaatggtggcaattgga |
117 |
Q |
| |
|
|||||| || ||||| ||||||| |||| |||||||| |||||||| |||| |||||||||||||||||| |||||||||||| ||||||||||| |
|
|
| T |
34233388 |
aaagaaatgtggaccggaacaacattctccaccttcagccaacaac---ttttggagtgaagagaaatttggctttggatggaaaccagtggcaattggt |
34233484 |
T |
 |
| Q |
118 |
tatggatgtggatttgtgattggaataggcctcggatattgcatgtttttaattggaaagtctagatggcttgtgatgatatttggtggtcagcctaaaa |
217 |
Q |
| |
|
|||||||||||||||||| ||||||||||||| ||||||| |||||||||||||||||| |||||||| |||||||||||||||||||||| ||||| | |
|
|
| T |
34233485 |
tatggatgtggatttgtgtttggaataggccttggatattatatgtttttaattggaaagcctagatggtttgtgatgatatttggtggtcatcctaaga |
34233584 |
T |
 |
| Q |
218 |
gaagagtgaaaaggagagcaagagtgagtaggaaccatggtgcaaccatgaatcaga |
274 |
Q |
| |
|
|||||||||| |||||| || |||||| || ||| ||||| ||||||||||||||| |
|
|
| T |
34233585 |
gaagagtgaataggagaacataagtgaggagaaacaatggtccaaccatgaatcaga |
34233641 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 18 - 274
Target Start/End: Original strand, 34241161 - 34241414
Alignment:
| Q |
18 |
aaagaagtgcggacctgaacaacgttctgcaccttcacccaacaacagcttttcgagtgaagagaaatttggatttggatggaaaatggtggcaattgga |
117 |
Q |
| |
|
|||||| || ||||| ||||||| |||| |||||||| |||||||| |||| |||||||||||||||||| |||||||||||| ||||||||||| |
|
|
| T |
34241161 |
aaagaaatgtggaccggaacaacattctccaccttcagccaacaac---ttttggagtgaagagaaatttggctttggatggaaaccagtggcaattggt |
34241257 |
T |
 |
| Q |
118 |
tatggatgtggatttgtgattggaataggcctcggatattgcatgtttttaattggaaagtctagatggcttgtgatgatatttggtggtcagcctaaaa |
217 |
Q |
| |
|
|||||||||||||||||| ||||||||||||| ||||||| |||||||||||||||||| |||||||| |||||||||||||||||||||| ||||| | |
|
|
| T |
34241258 |
tatggatgtggatttgtgtttggaataggccttggatattatatgtttttaattggaaagcctagatggtttgtgatgatatttggtggtcatcctaaga |
34241357 |
T |
 |
| Q |
218 |
gaagagtgaaaaggagagcaagagtgagtaggaaccatggtgcaaccatgaatcaga |
274 |
Q |
| |
|
|||||||||| |||||| || |||||| || ||| ||||| ||||||||||||||| |
|
|
| T |
34241358 |
gaagagtgaataggagaacataagtgaggagaaacaatggtccaaccatgaatcaga |
34241414 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 73 - 271
Target Start/End: Original strand, 41714170 - 41714368
Alignment:
| Q |
73 |
agtgaagagaaatttggatttggatggaaaatggtggcaattggatatggatgtggatttgtgattggaataggcctcggatattgcatgtttttaattg |
172 |
Q |
| |
|
|||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| | || |||| ||||||||| || | |
|
|
| T |
41714170 |
agtgcagagaaatttggatttggatggaaagcagtggcaattggatatggatgtggatttgtgattggaataggcattgggtattacatgtttttgatcg |
41714269 |
T |
 |
| Q |
173 |
gaaagtctagatggcttgtgatgatatttggtggtcagcctaaaagaagagtgaaaaggagagcaagagtgagtaggaaccatggtgcaaccatgaatc |
271 |
Q |
| |
|
||||| ||||||||||||| ||||||||||||||||||||||| |||| ||||| | ||||| ||||| |||| |||| | ||||| |||||||||||| |
|
|
| T |
41714270 |
gaaagcctagatggcttgtcatgatatttggtggtcagcctaagagaatagtgacagggagaacaagaatgaggaggaccaatggttcaaccatgaatc |
41714368 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 72 - 270
Target Start/End: Original strand, 41618304 - 41618502
Alignment:
| Q |
72 |
gagtgaagagaaatttggatttggatggaaaatggtggcaattggatatggatgtggatttgtgattggaataggcctcggatattgcatgtttttaatt |
171 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||| |||||||||||||||||| | || |||||||||||||| |||| || |||| |||||| |
|
|
| T |
41618304 |
gagtgaagagaaatttggatttggatggaaaccagtggctattggatatggatgtggaatggttattggaataggccttggatgttttgtgttgttaatt |
41618403 |
T |
 |
| Q |
172 |
ggaaagtctagatggcttgtgatgatatttggtggtcagcctaaaagaagagtgaaaaggagagcaagagtgagtaggaaccatggtgcaaccatgaat |
270 |
Q |
| |
|
|||||| ||||||||||||||||||| |||| ||||| ||||| |||||||| |||||| |||||||||| || | ||||| ||||||||||| |
|
|
| T |
41618404 |
ggaaagcctagatggcttgtgatgatggttggaggtcaacctaagcaaagagtgacaaggagcacaagagtgaggagaactcatggctcaaccatgaat |
41618502 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 72 - 215
Target Start/End: Original strand, 41572665 - 41572808
Alignment:
| Q |
72 |
gagtgaagagaaatttggatttggatggaaaatggtggcaattggatatggatgtggatttgtgattggaataggcctcggatattgcatgtttttaatt |
171 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||| |||||||||||||||||| | || |||||||||||||| |||| || |||| |||| |
|
|
| T |
41572665 |
gagtgaagagaaatttggatttggatggaaaccagtggctattggatatggatgtggaatggttattggaataggccttggatgttttgtgttgttaacc |
41572764 |
T |
 |
| Q |
172 |
ggaaagtctagatggcttgtgatgatatttggtggtcagcctaa |
215 |
Q |
| |
|
|||||| ||||||||||||||||||| |||| ||||| ||||| |
|
|
| T |
41572765 |
ggaaagcctagatggcttgtgatgatggttggaggtcaacctaa |
41572808 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 135; Significance: 3e-70; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 28 - 278
Target Start/End: Original strand, 25523639 - 25523889
Alignment:
| Q |
28 |
ggacctgaacaacgttctgcaccttcacccaacaacagcttttcgagtgaagagaaatttggatttggatggaaaatggtggcaattggatatggatgtg |
127 |
Q |
| |
|
|||| |||||||| |||| |||||||||||||||| | ||||| ||||||||||||||||||||||||||||| | ||||| ||||||||||||||||| |
|
|
| T |
25523639 |
ggacttgaacaacattctccaccttcacccaacaaaaacttttggagtgaagagaaatttggatttggatggataccggtggtaattggatatggatgtg |
25523738 |
T |
 |
| Q |
128 |
gatttgtgattggaataggcctcggatattgcatgtttttaattggaaagtctagatggcttgtgatgatatttggtggtcagcctaaaagaagagtgaa |
227 |
Q |
| |
|
||||| |||||||||||||| | |||||||| ||||||||| |||||||| ||||||||||||||||||||||||| ||||||||||| |||| ||||| |
|
|
| T |
25523739 |
gatttctgattggaataggcattggatattgtatgtttttagttggaaagcctagatggcttgtgatgatatttggcggtcagcctaagagaaaggtgaa |
25523838 |
T |
 |
| Q |
228 |
aaggagagcaagagtgagtaggaaccatggtgcaaccatgaatcagaatca |
278 |
Q |
| |
|
|| || ||||| |||| ||||| |||||| || |||||||||||||||| |
|
|
| T |
25523839 |
aaaaaggacaagaatgaggaggaatcatggtacagccatgaatcagaatca |
25523889 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 134; Significance: 1e-69; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 18 - 306
Target Start/End: Complemental strand, 11117638 - 11117347
Alignment:
| Q |
18 |
aaagaagtgcggacctgaacaacgttctgcaccttcacccaacaacag---cttttcgagtgaagagaaatttggatttggatggaaaatggtggcaatt |
114 |
Q |
| |
|
|||||| || ||||||||||||| |||| |||||||| |||||||| || || || |||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
11117638 |
aaagaaatgtggacctgaacaacattctccaccttcagccaacaactcttcctcttggaatgaagagaaatttggatttggatggaaagcagtggcaatt |
11117539 |
T |
 |
| Q |
115 |
ggatatggatgtggatttgtgattggaataggcctcggatattgcatgtttttaattggaaagtctagatggcttgtgatgatatttggtggtcagccta |
214 |
Q |
| |
|
||||||| |||||||||||||||||||||| || | ||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||||||||| |
|
|
| T |
11117538 |
ggatatgcatgtggatttgtgattggaataagcattggatattatatgtttttaattggaaagcctagatggcttgtcatgatatttggtggtcagccta |
11117439 |
T |
 |
| Q |
215 |
aaagaagagtgaaaaggagagcaagagtgagtaggaaccatggtgcaaccatgaatcagaatcaaatggtggcaatgtcgtagtcttattgt |
306 |
Q |
| |
|
| |||||||||| ||||||| |||||||||| || |||||| ||| ||||||||||||||| |||||| |||||| |||| ||||||| |
|
|
| T |
11117438 |
agagaagagtgacaaggagaacaagagtgaggagcgcacatggttcaaacatgaatcagaatcagatggtgcaaatgtcatagttttattgt |
11117347 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 121; Significance: 6e-62; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 28 - 278
Target Start/End: Complemental strand, 8522588 - 8522341
Alignment:
| Q |
28 |
ggacctgaacaacgttctgcaccttcacccaacaacagcttttcgagtgaagagaaatttggatttggatggaaaatggtggcaattggatatggatgtg |
127 |
Q |
| |
|
||||||||||||| ||||||||||||| |||||||| |||| ||||||||||| |||| ||||||||||||| |||||||||||||| ||||||| |
|
|
| T |
8522588 |
ggacctgaacaacattctgcaccttcagccaacaac---ttttgcagtgaagagaagtttgaatttggatggaaaccagtggcaattggatacggatgtg |
8522492 |
T |
 |
| Q |
128 |
gatttgtgattggaataggcctcggatattgcatgtttttaattggaaagtctagatggcttgtgatgatatttggtggtcagcctaaaagaagagtgaa |
227 |
Q |
| |
|
|||||||||||||||||||| | ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| || |||||||| |
|
|
| T |
8522491 |
gatttgtgattggaataggcattggatattatatgtttttaattggaaagcctagatggcttgtcatgatatttggtggtcagcctaagaggagagtgaa |
8522392 |
T |
 |
| Q |
228 |
aaggagagcaagagtgagtaggaaccatggtgcaaccatgaatcagaatca |
278 |
Q |
| |
|
||| || ||||| ||| |||||||| || ||| || |||||||||||| |
|
|
| T |
8522391 |
aagaaggacaagaatgacgaggaaccaaagttcaatcacgaatcagaatca |
8522341 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University