View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19141_high_29 (Length: 221)
Name: NF19141_high_29
Description: NF19141
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19141_high_29 |
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Alignment Details
Target: chr4 (Bit Score: 197; Significance: 1e-107; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 334231 - 334019
Alignment:
| Q |
1 |
aatacatcatataatcatataaattataaattttaaaacctacaaactaaagcagcattttgtattatccaacattttgacacttcaaccaatagtacat |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
334231 |
aatacatcatataatcatataaattataaattttaaaacctacaaactcaagtagcattttgtattatccaacattttgacacttcaaccaatagtacat |
334132 |
T |
|
| Q |
101 |
atgattcccagagagacataggtcattcgcaaataaatgaaaatgagtctaactgat-aaaatcaagccctttaaatacataccaaggatttctccattg |
199 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
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| T |
334131 |
atgattcccagagagacataggtcattcgcaaataaatgaaaatgagtctaactgataaaaatcaagccctttaaatacataccaaggatttctccattg |
334032 |
T |
|
| Q |
200 |
ctgctatctgtgc |
212 |
Q |
| |
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||||||||||||| |
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| T |
334031 |
ctgctatctgtgc |
334019 |
T |
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