View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19142_high_3 (Length: 430)
Name: NF19142_high_3
Description: NF19142
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19142_high_3 |
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Alignment Details
Target: chr7 (Bit Score: 313; Significance: 1e-176; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 313; E-Value: 1e-176
Query Start/End: Original strand, 1 - 418
Target Start/End: Complemental strand, 47125134 - 47124717
Alignment:
| Q |
1 |
acaatgaatataggtaaaaattatggcattgatctttaaagatctttaaagcaaatgtgctnnnnnnnnnnnnnnnnnnnnnnntcattaaggaagacca |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
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| T |
47125134 |
acaatgaatataggtaaaaattatggcattgatctttaaagatctttaaagcaaatgtgctaaaagaagtaaagaaaaaataaatcattaaggaagacca |
47125035 |
T |
|
| Q |
101 |
cattgaacaagagttcacttttttaggctcacacctttgataccaaattgaactactagaggaatatgaagtagcgtgttcattaatcttgttcaataaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47125034 |
cattgaacaagagttcacttttttaggctcacacctttgataccaaattgaactactagaggaatatgaagtagcgtgttcattaatcttgttcaataaa |
47124935 |
T |
|
| Q |
201 |
aaatgtgaaattgattataaggttgtttatccctatgtatatataaatatctaaatgcaactaaacagtnnnnnnnnttaatctaaccgttgtctagcta |
300 |
Q |
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|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
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| T |
47124934 |
aaatgtgaaattgattataaggttgtttatccctatgtatatataaatatctaaatgcaactaaacagtaaaaaaaattaatctaaccgttgtctagcta |
47124835 |
T |
|
| Q |
301 |
acttaaccaacccataataatattgtctgaatgaaggacatggctgcaaaattttaaaataaaagatttagtggacacctttagagaagtcaattcccgc |
400 |
Q |
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|
|||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
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| T |
47124834 |
acttaaccaacccataataatattgtctcaatgaaggacatagctgcaaaattttaaaataaaagatttagtggacacctttaaagaagtcaattcccgc |
47124735 |
T |
|
| Q |
401 |
aagccttgctcaacaaaa |
418 |
Q |
| |
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|||||||||||||||||| |
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| T |
47124734 |
aagccttgctcaacaaaa |
47124717 |
T |
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