View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19144_high_7 (Length: 307)
Name: NF19144_high_7
Description: NF19144
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19144_high_7 |
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Alignment Details
Target: chr2 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 19 - 291
Target Start/End: Original strand, 13447404 - 13447677
Alignment:
| Q |
19 |
tcctgacccaccaccgacagacgcctcaacgacgacaccaatggatcaccaacacgacaagagatccatcgaaaa-aatacaacagtgttggtgcacaga |
117 |
Q |
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| T |
13447404 |
tcctgacccaccaccgacagacgcctcaacgacgacaccaatggatcatcaacacgacaagagatccatcgaaaaaaatacaacagtgttggtgcacaga |
13447503 |
T |
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| Q |
118 |
ttgtagatgattgaaaaccagacatgaaagaaatgcattcgaaccaaacttggtatgtatagcgaatgaaacaaattaggggctaatcttcggtcnnnnn |
217 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
13447504 |
ttgtagatgattgaaaaccagacatgaaagaaatgcattcgaaccaaacttggtatgtatagcgaatgaaacaaattaggggctaatcttcggtcaaaag |
13447603 |
T |
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| Q |
218 |
nnnnnnnnnnngacaggatcccacaaaatctagagatttaaagtacagaaaccagctttacaggattcttccat |
291 |
Q |
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||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
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| T |
13447604 |
aaaaagaaacagacaggatcccacaaaatctagagatttaaagtacaggaaccagctttacaggattcttccat |
13447677 |
T |
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