View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19145_high_1 (Length: 1127)

Name: NF19145_high_1
Description: NF19145
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19145_high_1
NF19145_high_1
[»] chr8 (31 HSPs)
chr8 (16-705)||(34724239-34724918)
chr8 (695-1116)||(34723420-34723827)
chr8 (736-898)||(15884556-15884718)
chr8 (736-899)||(43027252-43027416)
chr8 (736-865)||(8141049-8141179)
chr8 (730-899)||(14666070-14666240)
chr8 (736-899)||(2467117-2467281)
chr8 (736-899)||(6100419-6100583)
chr8 (736-899)||(8997543-8997707)
chr8 (736-855)||(38922457-38922577)
chr8 (740-893)||(18373961-18374115)
chr8 (38-187)||(34728912-34729063)
chr8 (731-899)||(45521111-45521279)
chr8 (741-899)||(43032853-43033012)
chr8 (736-866)||(44893310-44893441)
chr8 (736-866)||(583761-583890)
chr8 (736-865)||(10927553-10927683)
chr8 (736-865)||(24837189-24837319)
chr8 (740-899)||(17981392-17981552)
chr8 (736-898)||(7673657-7673816)
chr8 (736-821)||(17845680-17845764)
chr8 (736-840)||(34613836-34613941)
chr8 (815-899)||(2964103-2964187)
chr8 (736-899)||(16893884-16894046)
chr8 (740-866)||(44031467-44031599)
chr8 (736-866)||(13085471-13085602)
chr8 (740-866)||(33401831-33401958)
chr8 (736-861)||(1013014-1013140)
chr8 (815-865)||(13357989-13358039)
chr8 (834-899)||(22212514-22212579)
chr8 (486-531)||(35300941-35300986)
[»] chr4 (46 HSPs)
chr4 (736-864)||(24166398-24166527)
chr4 (736-899)||(38165975-38166139)
chr4 (736-865)||(1446774-1446904)
chr4 (736-865)||(29895735-29895865)
chr4 (736-861)||(53599008-53599134)
chr4 (736-893)||(1940782-1940937)
chr4 (736-899)||(47078406-47078570)
chr4 (751-866)||(15839967-15840082)
chr4 (736-901)||(27248376-27248540)
chr4 (736-866)||(48317307-48317438)
chr4 (736-865)||(43458561-43458691)
chr4 (739-863)||(29588687-29588812)
chr4 (740-899)||(5472847-5473007)
chr4 (768-899)||(42722576-42722708)
chr4 (758-865)||(49260698-49260806)
chr4 (736-866)||(3574478-3574609)
chr4 (769-899)||(7246645-7246776)
chr4 (736-898)||(13073486-13073649)
chr4 (768-899)||(21192622-21192752)
chr4 (736-866)||(41162914-41163045)
chr4 (749-899)||(47682381-47682531)
chr4 (737-866)||(49952178-49952308)
chr4 (757-866)||(55005338-55005448)
chr4 (815-899)||(17080071-17080155)
chr4 (736-899)||(55920982-55921146)
chr4 (736-898)||(33647669-33647832)
chr4 (747-866)||(36262799-36262917)
chr4 (751-865)||(295566-295680)
chr4 (752-865)||(20354601-20354715)
chr4 (798-866)||(20532441-20532510)
chr4 (751-898)||(40780861-40781009)
chr4 (771-893)||(3159474-3159597)
chr4 (736-866)||(12703577-12703708)
chr4 (822-901)||(14567274-14567353)
chr4 (752-865)||(20128273-20128387)
chr4 (736-861)||(38075381-38075507)
chr4 (736-785)||(19651559-19651608)
chr4 (741-861)||(20421727-20421847)
chr4 (815-887)||(8424582-8424654)
chr4 (736-899)||(8888970-8889134)
chr4 (815-899)||(14124044-14124128)
chr4 (815-899)||(30317261-30317345)
chr4 (769-863)||(48015108-48015203)
chr4 (834-901)||(54946296-54946363)
chr4 (812-866)||(50485968-50486022)
chr4 (736-773)||(4736545-4736582)
[»] chr6 (21 HSPs)
chr6 (736-899)||(14107357-14107521)
chr6 (736-899)||(21898595-21898759)
chr6 (736-865)||(2271336-2271464)
chr6 (736-865)||(29333172-29333301)
chr6 (736-899)||(5253222-5253386)
chr6 (736-901)||(8938658-8938824)
chr6 (758-899)||(12606399-12606541)
chr6 (739-899)||(3601034-3601195)
chr6 (815-899)||(9633624-9633708)
chr6 (801-893)||(13391299-13391391)
chr6 (815-899)||(30788852-30788936)
chr6 (739-865)||(13036037-13036164)
chr6 (736-865)||(19230592-19230720)
chr6 (736-888)||(29444775-29444928)
chr6 (736-899)||(8611973-8612137)
chr6 (735-899)||(19089444-19089609)
chr6 (736-784)||(5759575-5759623)
chr6 (736-899)||(6606096-6606260)
chr6 (736-899)||(8932608-8932772)
chr6 (736-899)||(8944074-8944238)
chr6 (812-899)||(5029841-5029928)
[»] chr1 (37 HSPs)
chr1 (736-865)||(5855466-5855596)
chr1 (736-899)||(10422732-10422896)
chr1 (752-865)||(14254302-14254416)
chr1 (736-889)||(40288487-40288641)
chr1 (751-899)||(9659179-9659327)
chr1 (736-899)||(17642004-17642168)
chr1 (736-899)||(11397889-11398052)
chr1 (736-865)||(49078058-49078188)
chr1 (736-899)||(26660082-26660245)
chr1 (740-899)||(32150922-32151082)
chr1 (740-899)||(43959821-43959981)
chr1 (736-865)||(2980965-2981095)
chr1 (736-865)||(17092511-17092641)
chr1 (800-901)||(50371832-50371934)
chr1 (743-899)||(16956417-16956574)
chr1 (731-899)||(18915806-18915975)
chr1 (736-865)||(46929772-46929901)
chr1 (736-864)||(48798105-48798234)
chr1 (736-899)||(8763935-8764099)
chr1 (800-892)||(21849212-21849304)
chr1 (736-899)||(33004015-33004179)
chr1 (737-899)||(41663856-41664019)
chr1 (752-865)||(30927761-30927875)
chr1 (736-865)||(33418149-33418279)
chr1 (739-865)||(47312933-47313059)
chr1 (739-901)||(2567223-2567386)
chr1 (736-890)||(15465909-15466064)
chr1 (800-899)||(44969673-44969772)
chr1 (817-899)||(37339846-37339928)
chr1 (814-899)||(10172971-10173056)
chr1 (753-861)||(10336477-10336586)
chr1 (736-899)||(26325756-26325920)
chr1 (824-899)||(4581682-4581757)
chr1 (800-865)||(13262091-13262157)
chr1 (740-901)||(14357703-14357865)
chr1 (736-860)||(34877934-34878059)
chr1 (755-899)||(45361882-45362027)
[»] chr7 (38 HSPs)
chr7 (731-862)||(4195238-4195370)
chr7 (738-899)||(34659174-34659336)
chr7 (736-899)||(48804629-48804793)
chr7 (736-893)||(5039423-5039581)
chr7 (736-899)||(43346778-43346942)
chr7 (736-899)||(43861971-43862135)
chr7 (739-893)||(1797409-1797564)
chr7 (736-893)||(16802069-16802227)
chr7 (736-865)||(17748415-17748545)
chr7 (739-899)||(5069814-5069975)
chr7 (736-899)||(22993366-22993530)
chr7 (736-866)||(4228786-4228914)
chr7 (736-893)||(13095804-13095962)
chr7 (815-901)||(38578864-38578950)
chr7 (736-865)||(47341822-47341952)
chr7 (736-901)||(22573759-22573924)
chr7 (736-899)||(10047875-10048039)
chr7 (752-861)||(42210299-42210409)
chr7 (736-863)||(43925458-43925586)
chr7 (739-790)||(11607080-11607131)
chr7 (800-902)||(27028289-27028392)
chr7 (755-832)||(45853586-45853664)
chr7 (816-865)||(3353451-3353500)
chr7 (736-892)||(21530694-21530851)
chr7 (815-899)||(4705983-4706067)
chr7 (751-866)||(14535252-14535368)
chr7 (768-899)||(21190779-21190911)
chr7 (736-839)||(22268088-22268192)
chr7 (799-878)||(23658188-23658268)
chr7 (832-892)||(28396166-28396226)
chr7 (756-899)||(36619253-36619397)
chr7 (768-899)||(37514899-37515031)
chr7 (819-899)||(41945503-41945583)
chr7 (736-866)||(45960035-45960165)
chr7 (800-865)||(30827302-30827368)
chr7 (845-899)||(34127644-34127698)
chr7 (464-529)||(11680588-11680653)
chr7 (735-863)||(42032041-42032170)
[»] chr3 (45 HSPs)
chr3 (736-899)||(13893869-13894033)
chr3 (736-899)||(7328787-7328950)
chr3 (736-899)||(15320129-15320293)
chr3 (736-865)||(33251605-33251735)
chr3 (736-899)||(29127862-29128026)
chr3 (736-899)||(54261169-54261333)
chr3 (736-865)||(45877397-45877527)
chr3 (736-893)||(55069685-55069843)
chr3 (815-899)||(26361967-26362051)
chr3 (740-899)||(28572211-28572371)
chr3 (739-865)||(6462358-6462485)
chr3 (736-866)||(10855327-10855458)
chr3 (758-893)||(15795500-15795635)
chr3 (736-899)||(47749105-47749268)
chr3 (736-866)||(51682987-51683118)
chr3 (736-865)||(3755513-3755643)
chr3 (736-858)||(10040500-10040622)
chr3 (736-866)||(39849015-39849145)
chr3 (736-899)||(7310703-7310867)
chr3 (815-898)||(3507534-3507617)
chr3 (736-866)||(42412807-42412938)
chr3 (736-865)||(26207835-26207965)
chr3 (736-864)||(29135856-29135985)
chr3 (815-899)||(8164576-8164660)
chr3 (736-867)||(28242221-28242353)
chr3 (736-899)||(41630512-41630676)
chr3 (741-852)||(49082772-49082884)
chr3 (736-902)||(29762152-29762319)
chr3 (844-899)||(47164158-47164213)
chr3 (736-865)||(25294903-25295033)
chr3 (736-837)||(50682420-50682522)
chr3 (800-888)||(30767258-30767347)
chr3 (737-861)||(41219537-41219661)
chr3 (800-891)||(26043819-26043911)
chr3 (832-892)||(43330739-43330799)
chr3 (815-866)||(7648763-7648814)
chr3 (844-899)||(36043674-36043729)
chr3 (740-889)||(22405553-22405703)
chr3 (812-862)||(34460547-34460597)
chr3 (815-893)||(35923629-35923707)
chr3 (736-865)||(49198294-49198424)
chr3 (768-861)||(52364838-52364932)
chr3 (814-899)||(15084945-15085030)
chr3 (755-899)||(47219106-47219251)
chr3 (816-893)||(50405609-50405686)
[»] chr2 (50 HSPs)
chr2 (736-899)||(7747217-7747381)
chr2 (736-865)||(22593078-22593207)
chr2 (736-899)||(10026615-10026779)
chr2 (736-899)||(18902529-18902693)
chr2 (736-899)||(38005345-38005509)
chr2 (739-893)||(21286390-21286545)
chr2 (736-866)||(29653571-29653701)
chr2 (740-893)||(7787003-7787157)
chr2 (736-864)||(13026445-13026574)
chr2 (739-887)||(45263678-45263827)
chr2 (736-899)||(331444-331608)
chr2 (752-899)||(25540403-25540551)
chr2 (736-890)||(42770659-42770814)
chr2 (736-899)||(44945537-44945700)
chr2 (736-901)||(2550811-2550977)
chr2 (736-865)||(29422158-29422288)
chr2 (734-901)||(6358148-6358316)
chr2 (736-899)||(8410074-8410238)
chr2 (768-899)||(10823035-10823167)
chr2 (753-899)||(41220595-41220742)
chr2 (779-865)||(35946725-35946811)
chr2 (736-893)||(39201513-39201671)
chr2 (734-899)||(44139425-44139591)
chr2 (739-899)||(37560119-37560280)
chr2 (800-899)||(12455317-12455417)
chr2 (736-899)||(12864167-12864331)
chr2 (735-902)||(38962705-38962873)
chr2 (736-866)||(21180346-21180477)
chr2 (816-901)||(9360745-9360830)
chr2 (800-893)||(24179576-24179669)
chr2 (736-899)||(2528340-2528504)
chr2 (736-899)||(14169608-14169772)
chr2 (736-866)||(15079426-15079557)
chr2 (755-901)||(16034899-16035046)
chr2 (751-865)||(25549686-25549801)
chr2 (736-898)||(20612534-20612699)
chr2 (800-865)||(34130335-34130400)
chr2 (815-899)||(27725963-27726047)
chr2 (736-898)||(10046477-10046639)
chr2 (740-811)||(20963198-20963268)
chr2 (736-826)||(29697467-29697558)
chr2 (731-849)||(40968964-40969083)
chr2 (734-899)||(3811690-3811856)
chr2 (751-865)||(16813198-16813312)
chr2 (751-865)||(16852477-16852591)
chr2 (801-864)||(28525489-28525554)
chr2 (736-861)||(34356149-34356275)
chr2 (751-864)||(39806919-39807033)
chr2 (812-893)||(10669612-10669693)
chr2 (736-785)||(23500795-23500844)
[»] chr5 (45 HSPs)
chr5 (736-865)||(9168286-9168414)
chr5 (736-863)||(38897754-38897881)
chr5 (736-899)||(1538375-1538539)
chr5 (736-899)||(5731919-5732083)
chr5 (735-865)||(19572667-19572798)
chr5 (751-901)||(25417180-25417331)
chr5 (736-865)||(37263185-37263314)
chr5 (736-865)||(41163493-41163622)
chr5 (736-899)||(9812816-9812980)
chr5 (736-899)||(42086271-42086435)
chr5 (769-899)||(12081885-12082016)
chr5 (736-893)||(3653919-3654075)
chr5 (736-899)||(5079275-5079438)
chr5 (736-899)||(12704958-12705122)
chr5 (736-875)||(26077085-26077225)
chr5 (736-866)||(7866525-7866656)
chr5 (777-899)||(40117400-40117523)
chr5 (816-893)||(6764462-6764539)
chr5 (735-899)||(8513462-8513627)
chr5 (736-839)||(16755005-16755109)
chr5 (746-790)||(28862779-28862823)
chr5 (752-811)||(18327730-18327789)
chr5 (736-861)||(20682654-20682781)
chr5 (806-893)||(24463891-24463978)
chr5 (756-901)||(11845798-11845944)
chr5 (800-901)||(14588614-14588716)
chr5 (736-861)||(18136317-18136443)
chr5 (736-865)||(20525782-20525912)
chr5 (736-857)||(28857072-28857194)
chr5 (736-852)||(35403558-35403675)
chr5 (815-899)||(9805028-9805112)
chr5 (731-866)||(35561850-35561986)
chr5 (815-899)||(41801001-41801085)
chr5 (736-899)||(2485141-2485304)
chr5 (798-898)||(21487623-21487721)
chr5 (815-878)||(30995145-30995208)
chr5 (736-790)||(1826801-1826855)
chr5 (736-865)||(30349523-30349653)
chr5 (815-893)||(39099784-39099862)
chr5 (815-865)||(42291538-42291588)
chr5 (736-889)||(18294493-18294646)
chr5 (736-785)||(23383592-23383641)
chr5 (812-861)||(24875366-24875415)
chr5 (805-866)||(25452939-25453000)
chr5 (765-865)||(35638066-35638167)
[»] scaffold0006 (1 HSPs)
scaffold0006 (736-893)||(68463-68618)
[»] scaffold0029 (1 HSPs)
scaffold0029 (736-892)||(40990-41147)
[»] scaffold0004 (1 HSPs)
scaffold0004 (742-866)||(95013-95136)
[»] scaffold0011 (2 HSPs)
scaffold0011 (739-898)||(186467-186626)
scaffold0011 (844-899)||(224372-224427)
[»] scaffold0209 (1 HSPs)
scaffold0209 (736-866)||(12521-12650)
[»] scaffold0086 (1 HSPs)
scaffold0086 (736-865)||(26129-26259)
[»] scaffold0170 (1 HSPs)
scaffold0170 (801-865)||(9856-9921)
[»] scaffold0316 (1 HSPs)
scaffold0316 (800-899)||(1613-1713)
[»] scaffold0291 (1 HSPs)
scaffold0291 (815-899)||(6881-6965)
[»] scaffold0010 (1 HSPs)
scaffold0010 (815-899)||(155710-155794)
[»] scaffold0005 (1 HSPs)
scaffold0005 (822-901)||(250022-250101)
[»] scaffold0384 (1 HSPs)
scaffold0384 (736-865)||(5919-6048)
[»] scaffold0002 (1 HSPs)
scaffold0002 (751-899)||(319383-319532)
[»] scaffold0009 (1 HSPs)
scaffold0009 (812-899)||(42831-42918)
[»] scaffold0016 (1 HSPs)
scaffold0016 (736-785)||(8824-8873)


Alignment Details
Target: chr8 (Bit Score: 501; Significance: 0; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 501; E-Value: 0
Query Start/End: Original strand, 16 - 705
Target Start/End: Complemental strand, 34724918 - 34724239
Alignment:
Q  16 tatataatggatttaaacatctgtgtaaaatagttttacactaacatccaatgaaaacctattgttttgtcaatcacctcactattgtaaggatgttttg 115  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34724918 tatataatggatttaaatatctgtgtaaaatagttttacactaacatccaatgaaaacctattgttttgtcaatcacctcactattgtaaggatgttttg 34724819  T
Q  116 agattagtagagtatgatatggataaatggtggtttctcatctgatatcagagtacatgctcattgaactctttataaatgacccttataaatctctcga 215  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  34724818 agattagtagagtatgatatggataaatggtggtttctcatctgatatcagagtacatgctcattgaactctttataaatgacccttataaatctcttga 34724719  T
Q  216 gggagagttatgccaccaattatgattctacggacccaacttgagggattagtttttatagtaatgcatagaagatacatagtttacat-----nnnnnn 310  Q
    ||||||||||||||||||||||||||||| |              ||||||||||||||||||||||||||||||||||||||||||||               
T  34724718 gggagagttatgccaccaattatgattctgc--------------ggattagtttttatagtaatgcatagaagatacatagtttacatataaaaaaaaa 34724633  T
Q  311 nngtccaatttacttcacggctatcaaataaatctctcggtcaagtccaaacatcagacacatgtgcaaagttaaaggttgaagcaggctattcaaggac 410  Q
      ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  34724632 aagtccaatttacttcacggctatcaaataaatctctcggtcaagtccaaacatcagacacatgtgcaaagttaaaggttgaagcagtctattcaaggac 34724533  T
Q  411 gaagtatcaaggaagaagtatagctacttagcaccttcgtagttactaaaaggtatagttgaaaacagagta-aggaatgcatctaaaaatttgtaggcg 509  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| |  ||||||||||||||||||||| ||    
T  34724532 gaagtatcaaggaagaagtatagctacttagcaccttcgtagttactaaaaggtatagttggaaaaagagtataaaaatgcatctaaaaatttgtagacg 34724433  T
Q  510 gttttatatttaaggacaaatacnnnnnnnnngtaatagtcttataattagagactgaggggatattattaaaagaataaaaatcttatttatcttttat 609  Q
    |||||||||||||||||||| ||         ||||||||||||||||||||||| || ||  |||||||||||||||||||||||||||||||||||||    
T  34724432 gttttatatttaaggacaaacac--tttttttgtaatagtcttataattagagaccgaaggagtattattaaaagaataaaaatcttatttatcttttat 34724335  T
Q  610 gataattaataactatactaaattaagataactattttaaatttttgcgtgataacattcaaattagtacataaaatgatatgatagttaatcgtt 705  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  34724334 gataattaataactatactaaattaagataactatttcaaatttttgcgtggtaacattcaaattagtacataaaatgatatgatagttaatcgtt 34724239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 225; E-Value: 1e-123
Query Start/End: Original strand, 695 - 1116
Target Start/End: Complemental strand, 34723827 - 34723420
Alignment:
Q  695 agttaatcgttcttatctgtaattaaaatgcacataatatgaaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaat 794  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||||||| ||||||||||||    
T  34723827 agttaatcgttattatctgtaattaaaatgcacataatatgaaccaagttgtttgagctccggtggcaatgagctccttccaaagacatattcgggaaat 34723728  T
Q  795 gctgagttcgatttccaggagaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgt 894  Q
     || ||||||||| |||||  ||||| |||||||  |||||||||| |||||||| |||| |||||| |||        |||||||||||||||||||||    
T  34723727 actaagttcgattcccagggaaacaatgtttggc--ttgcgcatgcctttacgcaagagctggattaatcg--------tggtgtgtcgaaaaccggtgt 34723638  T
Q  895 gaaagaagnnnnnnnntgcacataatatgttgtgtgctgtggggagaagggagacagagagaagaagaaacctgcttcattttgtctttcctgcgtccac 994  Q
    ||||| |         |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34723637 gaaagca-aaaaaaaatgcacataatatgttgtgtgctgtggggagaatggagacagagagaagaagaaacctgcttcattttgtctttcctgcgtccac 34723539  T
Q  995 ctgtccactgtctctctggcctatgctactctgctcaatccaaatggttgatagttgaaacac-ttttttccatt----caaacaactacgttgtttgtc 1089  Q
    ||||||||||||||||||||        ||||||||||||||||||||||| ||||||||||| |||||||||||    |||||||||||||||||||||    
T  34723538 ctgtccactgtctctctggc--------ctctgctcaatccaaatggttgaaagttgaaacactttttttccattcaaacaaacaactacgttgtttgtc 34723447  T
Q  1090 gtttttgcgtccacctgtctctgttcc 1116  Q
    ||||||||||||||||||| |||||||    
T  34723446 gtttttgcgtccacctgtcactgttcc 34723420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 736 - 898
Target Start/End: Complemental strand, 15884718 - 15884556
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcg 835  Q
    |||||||||||||| |||||||||| || || |||||||||| ||||||   ||| ||| | | |||||||| ||||| |||||||  ||||| | ||||    
T  15884718 aaccaagttgattgggctccagtggtaaggagctccttccaaggacgtacctggggaataccgggttcgattcccaggggaacaacacttggcaagtgcg 15884619  T
Q  836 catgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaa 898  Q
    ||||| | |||||||||||||||||||||||  | |||||||| |||| ||||||||| ||||    
T  15884618 catgcctctacgcacgagccggattagtcgcccacctttggtgggtcggaaaccggtgcgaaa 15884556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 53; E-Value: 8e-21
Query Start/End: Original strand, 736 - 899
Target Start/End: Original strand, 43027252 - 43027416
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccagga-gaacaacgtttggccattgc 834  Q
    |||||||||| ||| |||||||||||||||| ||| || |||  ||||||| ||| ||| ||| |||||||| |||||| |||||||| ||| ||| |||    
T  43027252 aaccaagttgtttgggctccagtggcaatgagctcatttcaagaacgtatttggggaatactgggttcgattcccaggaggaacaacgattgtccaatgc 43027351  T
Q  835 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 899  Q
    |||||| | |||||| |||||||||||||||   ||||||| || |||| |||||| || |||||    
T  43027352 gcatgcctctacgcatgagccggattagtcgtccatctttgatgggtcggaaaccgatgcgaaag 43027416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 736 - 865
Target Start/End: Original strand, 8141049 - 8141179
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 834  Q
    |||||||||| ||| ||||||||||||| || || ||||||| |||||||||||| ||| | | |||||||||||||| | ||||||| ||||||| |||    
T  8141049 aaccaagttgtttgggctccagtggcaaggagctgcttccaaggacgtattcggggaataccgggttcgatttccaggggaaacaacgcttggccagtgc 8141148  T
Q  835 gcatgcatttacgcacgagccggattagtcg 865  Q
    |||||| | |||||| |||| | ||||||||    
T  8141149 gcatgcctctacgcatgagctgaattagtcg 8141179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 730 - 899
Target Start/End: Complemental strand, 14666240 - 14666070
Alignment:
Q  730 aatatgaaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggc 828  Q
    ||||| |||||||||| ||| ||||||||||||| || ||| |||||| ||||||| |||| ||| | | |||||||| ||||| | ||||||  |||||    
T  14666240 aatattaaccaagttgcttgggctccagtggcaaggagctcattccaaggacgtatccggggaataccgggttcgattcccaggggaaacaacacttggc 14666141  T
Q  829 cattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 899  Q
    || ||||||||| | ||||||| |||| ||||||||||  |   |||||| |||||||||||||| |||||    
T  14666140 cagtgcgcatgcctctacgcacaagccagattagtcgcccacagttggtgggtcgaaaaccggtgcgaaag 14666070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 736 - 899
Target Start/End: Complemental strand, 2467281 - 2467117
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 834  Q
    |||||||||| ||| ||||||||||||| || |||||||||| ||||||| |||| ||| | | |||||||||||| || |||||||  ||||||| |||    
T  2467281 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgatttccagggggaacaactcttggccagtgc 2467182  T
Q  835 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 899  Q
    |||||  | || ||| |||||||||||||||   |   ||||||||||| ||||||||| |||||    
T  2467181 gcatgtctctatgcatgagccggattagtcgtccacaattggtgtgtcggaaaccggtgcgaaag 2467117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 736 - 899
Target Start/End: Original strand, 6100419 - 6100583
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 834  Q
    |||||||||| ||| ||| ||||||||| || |||||| ||| ||||||| |||| ||| | | |||||||| ||||||| ||||||| ||||||| |||    
T  6100419 aaccaagttgtttgggcttcagtggcaaggagctcctttcaaggacgtatccggggaataccgggttcgattcccaggaggaacaacgcttggccagtgc 6100518  T
Q  835 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 899  Q
    ||||||   |||||| |||||||||||||||   | |||| ||| ||||||||||| || |||||    
T  6100519 gcatgccactacgcatgagccggattagtcgttcacctttagtgggtcgaaaaccgctgcgaaag 6100583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 736 - 899
Target Start/End: Complemental strand, 8997707 - 8997543
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 834  Q
    |||||||||| |||  |||||||||||| ||||||||| ||| ||| |||||||| ||| | | |||||||| | | || ||||||||||| |||| | |    
T  8997707 aaccaagttgcttggactccagtggcaaggaactcctttcaaggacatattcggggaataccgtgttcgattcctaaggggaacaacgtttcgccagttc 8997608  T
Q  835 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 899  Q
    |||||| | |||||| ||||| |||||||||   |||||||||| |||| ||||||||| |||||    
T  8997607 gcatgcctatacgcatgagccagattagtcgttcatctttggtgggtcggaaaccggtgcgaaag 8997543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 736 - 855
Target Start/End: Complemental strand, 38922577 - 38922457
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccag-gagaacaacgtttggccattgc 834  Q
    |||||||||| ||| ||||||||||||| || |||||||||| ||||||  |||| ||| | | |||||||| |||| | |||||||| ||||||| |||    
T  38922577 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattcccagagggaacaacgcttggccagtgc 38922478  T
Q  835 gcatgcatttacgcacgagcc 855  Q
    |||||| ||||||||||||||    
T  38922477 gcatgcctttacgcacgagcc 38922457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 740 - 893
Target Start/End: Original strand, 18373961 - 18374115
Alignment:
Q  740 aagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccagg-agaacaacgtttggccattgcgcat 838  Q
    |||||| ||| |||||| |||||| || ||| |||||||||  ||| |||||||| |   ||||||||  |||| ||||||||| ||| ||| |||||||    
T  18373961 aagttgtttgggctccaatggcaaggagctcattccaaagatatatccgggaaataccaggttcgattctcagggagaacaacgcttgaccagtgcgcat 18374060  T
Q  839 gcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtg 893  Q
    || | |||||| |||||||||||||||   | |||||||| ||||||||||||||    
T  18374061 gcctctacgcatgagccggattagtcgtccaactttggtgggtcgaaaaccggtg 18374115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 38 - 187
Target Start/End: Complemental strand, 34729063 - 34728912
Alignment:
Q  38 gtgtaaaatagttttacactaacatccaatgaaaacctattgttttgtcaatcacctcactattg----taaggatgttttgagattagtagagtatgat 133  Q
    |||||||||||||||||| | | |||||||||||||||||||||||  |  |||||||||||||     ||||||| |||||| ||||||||  || |      
T  34729063 gtgtaaaatagttttacattgagatccaatgaaaacctattgttttagcggtcacctcactatttattataaggatattttgaaattagtag--tacggc 34728966  T
Q  134 atggataaatggtggtttctcatctgatatcagagtacatgctcattgaactct 187  Q
    ||||||||||  |||||||||||  ||| || ||||| | ||||||||||||||    
T  34728965 atggataaattttggtttctcattggatgtcggagtataagctcattgaactct 34728912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 731 - 899
Target Start/End: Original strand, 45521111 - 45521279
Alignment:
Q  731 atatgaaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggcca 830  Q
    |||| |||||||||| ||| ||||||||||||| ||  || |||||| || |||  |||| ||| | | |||||||| ||||| |||||||  |||  ||    
T  45521111 atatcaaccaagttgcttgggctccagtggcaaggagttcattccaaggatgtacccggggaataccgggttcgattcccaggggaacaacacttgatca 45521210  T
Q  831 ttgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 899  Q
     ||||||||| | |||||| ||||||||||||||||  | ||||| || |||| ||||||||| |||||    
T  45521211 gtgcgcatgcctctacgcatgagccggattagtcgctcacctttgatgggtcggaaaccggtgcgaaag 45521279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 741 - 899
Target Start/End: Original strand, 43032853 - 43033012
Alignment:
Q  741 agttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgcgcatg 839  Q
    ||||| ||| ||||||||||||| ||  |||||||||| | ||||  |||||||   |  ||||||| ||||| | ||||||| ||||||| ||||||||    
T  43032853 agttgtttgggctccagtggcaaggagttccttccaaaaatgtatctgggaaatatcggattcgattcccagggggaacaacgcttggccagtgcgcatg 43032952  T
Q  840 catttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 899  Q
    | | ||| |||||||||||||||||||  | |||||||| |||  ||||||||| |||||    
T  43032953 cctctacacacgagccggattagtcgcccacctttggtgggtcagaaaccggtgcgaaag 43033012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 736 - 866
Target Start/End: Complemental strand, 44893441 - 44893310
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 834  Q
    |||||||||| ||| ||||||||||||| || |||||||||| ||||||  |||| ||| | | |||| ||||| | || |||||| | ||||||| ||     
T  44893441 aaccaagttgtttgggctccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcaatttctagggggaacaatgcttggccagtgt 44893342  T
Q  835 gcatgcatttacgcacgagccggattagtcgc 866  Q
    |||||| | |||||||||||||||||| ||||    
T  44893341 gcatgcctctacgcacgagccggattaatcgc 44893310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 736 - 866
Target Start/End: Original strand, 583761 - 583890
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcg 835  Q
    |||||||||| ||| |||| |||||||| || || ||||||| |||||| ||| ||||| | | |||||||| | ||| |||||||| ||| ||| ||||    
T  583761 aaccaagttgtttgggctctagtggcaaggagctacttccaaggacgtactcgagaaataccgggttcgattcctagg-gaacaacgcttgaccagtgcg 583859  T
Q  836 catgcatttacgcacgagccggattagtcgc 866  Q
    ||||| | |||||| ||| ||||||||||||    
T  583860 catgcctctacgcatgagtcggattagtcgc 583890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 736 - 865
Target Start/End: Original strand, 10927553 - 10927683
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 834  Q
    |||||||||| ||| ||| ||||||||| || || ||| ||| ||||||  |||| ||| | | |||||||| | ||||| ||||||| ||||||| |||    
T  10927553 aaccaagttgcttgggcttcagtggcaaggagcttctttcaaggacgtacccggggaataccgggttcgattcctaggaggaacaacgcttggccagtgc 10927652  T
Q  835 gcatgcatttacgcacgagccggattagtcg 865  Q
    |||||| | |||||| |||||||||||||||    
T  10927653 gcatgcctctacgcatgagccggattagtcg 10927683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 736 - 865
Target Start/End: Original strand, 24837189 - 24837319
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 834  Q
    |||||||||| ||| ||||||||||||| || ||||||||||  |||||  |||| ||| | | |||||||| ||| ||||||||||| ||||||| ||     
T  24837189 aaccaagttgcttgggctccagtggcaaggagctccttccaagtacgtacccggggaataccgtgttcgattcccagggagaacaacgcttggccagtgt 24837288  T
Q  835 gcatgcatttacgcacgagccggattagtcg 865  Q
     ||||| | || |||||||| ||||||||||    
T  24837289 tcatgcctctaagcacgagcaggattagtcg 24837319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 740 - 899
Target Start/End: Original strand, 17981392 - 17981552
Alignment:
Q  740 aagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgcgcat 838  Q
    |||||| ||| ||||||||||||| || |||||||||| || |||  |||||||| | | |||||||| ||| || |||||||  ||| ||| || ||||    
T  17981392 aagttgcttgggctccagtggcaaggagctccttccaaggatgtacccgggaaataccgggttcgattcccagggggaacaactcttgaccagtgtgcat 17981491  T
Q  839 gcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 899  Q
    || | |||||||||| || |||||| ||  | |||||||| |||| ||||||||| |||||    
T  17981492 gcctctacgcacgagtcgaattagttgcccagctttggtgagtcggaaaccggtgcgaaag 17981552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 736 - 898
Target Start/End: Complemental strand, 7673816 - 7673657
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcg 835  Q
    |||||||||| ||| ||||||||||||| || |||||||||| |||||||  ||| |||    |||||||||    || |||||||||||||| | || |    
T  7673816 aaccaagttgcttg-gctccagtggcaaggagctccttccaaggacgtatctggggaatatcaagttcgattag--ggggaacaacgtttggctagtgtg 7673720  T
Q  836 catgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaa 898  Q
    ||||| | |||||||||||||||||  ||||  |||||| |||  ||||||||||||| ||||    
T  7673719 catgcctctacgcacgagccggatttttcgcccatctttagtggatcgaaaaccggtgcgaaa 7673657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 736 - 821
Target Start/End: Original strand, 17845680 - 17845764
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaac 821  Q
    |||||||||| ||| |||||||||||||||| |||||||||| || ||| ||||| ||| ||| ||| |||| ||||| |||||||    
T  17845680 aaccaagttgtttgggctccagtggcaatgagctccttccaaggatgtactcggggaatactg-gtttgattcccaggggaacaac 17845764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 736 - 840
Target Start/End: Complemental strand, 34613941 - 34613836
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccagga-gaacaacgtttggccattgc 834  Q
    |||||| ||| ||| |||||||||||||||| |||||||||||  ||||| |||| |||   | |||||||| |||||| ||||||||| |||||| | |    
T  34613941 aaccaaattgtttgggctccagtggcaatgagctccttccaaaaccgtatccggggaatatcgggttcgattcccaggaggaacaacgtctggccagtac 34613842  T
Q  835 gcatgc 840  Q
    ||||||    
T  34613841 gcatgc 34613836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 815 - 899
Target Start/End: Original strand, 2964103 - 2964187
Alignment:
Q  815 gaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 899  Q
    |||||||| ||||||| || |||||| | ||||||||| |||||||||||||  | |||||||| |||  ||||||||| |||||    
T  2964103 gaacaacgcttggccaatgtgcatgcctctacgcacgaaccggattagtcgcccacctttggtgggtcagaaaccggtgcgaaag 2964187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 736 - 899
Target Start/End: Original strand, 16893884 - 16894046
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 834  Q
    |||||||||| ||| |||  |||||||| ||||||||||||| ||||||| |||| |||   | ||||||||  || || ||| |||| ||||||| | |    
T  16893884 aaccaagttgcttgggctatagtggcaaggaactccttccaatgacgtatccggggaatatcgggttcgattcacagggggaataacgcttggccagtac 16893983  T
Q  835 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 899  Q
     ||||| |||||||| |||||||||| |||||  | |||||||| |||| ||||||||| |||||    
T  16893984 acatgcctttacgcatgagccggatt-gtcgcccacctttggtg-gtcggaaaccggtgcgaaag 16894046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 740 - 866
Target Start/End: Complemental strand, 44031599 - 44031467
Alignment:
Q  740 aagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggcc-----attg 833  Q
    |||||| |||||||| |||||||| ||||||||||||| || |||  ||||||||   | |||||||||||| || |||||||| ||||||     | ||    
T  44031599 aagttgtttgagctctagtggcaaggaactccttccaaggatgtaaccgggaaatatcgggttcgatttccagggggaacaacgcttggccagtgtagtg 44031500  T
Q  834 cgcatgcatttacgcacgagccggattagtcgc 866  Q
     |||||| | | |||||||||||||||||||||    
T  44031499 tgcatgcctctgcgcacgagccggattagtcgc 44031467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 736 - 866
Target Start/End: Original strand, 13085471 - 13085602
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccag-gagaacaacgtttggccattgc 834  Q
    |||||| ||| ||| ||||||||||| | || |||||||||| ||||||| |||| ||| | | ||||||||  ||| | ||||||||||| |||| ||     
T  13085471 aaccaacttgtttgggctccagtggcgaggagctccttccaaggacgtatccggggaataccgggttcgattctcagagggaacaacgtttagccagtgt 13085570  T
Q  835 gcatgcatttacgcacgagccggattagtcgc 866  Q
    |||| | | |||||||||||| ||||| ||||    
T  13085571 gcatacctctacgcacgagccagattaatcgc 13085602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 740 - 866
Target Start/End: Complemental strand, 33401958 - 33401831
Alignment:
Q  740 aagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgcgcat 838  Q
    |||||| ||| ||||||||||||| || |||||| ||| |||||| ||||| ||| | | ||||||||| || || |||||||  ||| ||| || ||||    
T  33401958 aagttgtttgggctccagtggcaaggagctcctttcaaggacgtactcggggaataccgggttcgattttcagggggaacaacacttgaccagtgtgcat 33401859  T
Q  839 gcatttacgcacgagccggattagtcgc 866  Q
    || | |||||| ||| ||||||||||||    
T  33401858 gcctctacgcatgagtcggattagtcgc 33401831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 736 - 861
Target Start/End: Complemental strand, 1013140 - 1013014
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 834  Q
    |||||||||| ||| ||||||||||||| || ||  |||||| ||||||| |||| ||| | | |||||||| ||| || |||||||| ||||||| | |    
T  1013140 aaccaagttgcttgggctccagtggcaaggagctttttccaaggacgtatccggggaataccgggttcgattcccagggggaacaacgcttggccagtac 1013041  T
Q  835 gcatgcatttacgcacgagccggatta 861  Q
     ||||| | |||||| |||||| ||||    
T  1013040 acatgcctctacgcatgagccgaatta 1013014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 815 - 865
Target Start/End: Complemental strand, 13358039 - 13357989
Alignment:
Q  815 gaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcg 865  Q
    |||||||||||||||| || |||||| | || |||||||||||||||||||    
T  13358039 gaacaacgtttggccaatgtgcatgcctctatgcacgagccggattagtcg 13357989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 834 - 899
Target Start/End: Complemental strand, 22212579 - 22212514
Alignment:
Q  834 cgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 899  Q
    ||||||| | |||||||| ||||||||||||||  | ||||||||  ||||||||||||| |||||    
T  22212579 cgcatgcttctacgcacgggccggattagtcgctcacctttggtggttcgaaaaccggtgcgaaag 22212514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 486 - 531
Target Start/End: Complemental strand, 35300986 - 35300941
Alignment:
Q  486 aatgcatctaaaaatttgtaggcggttttatatttaaggacaaata 531  Q
    |||||||||||||||||||||  ||| || ||||||||||||||||    
T  35300986 aatgcatctaaaaatttgtagaaggtcttgtatttaaggacaaata 35300941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 62; Significance: 3e-26; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 736 - 864
Target Start/End: Original strand, 24166398 - 24166527
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcc-aggagaacaacgtttggccattgc 834  Q
    |||||||||||||| ||||||||||||| || |||||||||| |||||| ||||| ||| ||| |||||||| || |||  ||||||||||||||| |||    
T  24166398 aaccaagttgattgggctccagtggcaaggagctccttccaaggacgtactcggggaatactgggttcgattcccaagggaaacaacgtttggccagtgc 24166497  T
Q  835 gcatgcatttacgcacgagccggattagtc 864  Q
    |||||| | |||||||||||| ||||||||    
T  24166498 gcatgcctctacgcacgagccagattagtc 24166527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 736 - 899
Target Start/End: Original strand, 38165975 - 38166139
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 834  Q
    |||||||||| ||| |||||| |||||| || |||||||||| ||||||| |||| ||| ||| ||| |||| ||||| | ||||||| ||||||| |||    
T  38165975 aaccaagttgtttgggctccactggcaaggagctccttccaaggacgtatccggggaatactgggttggattcccagggggaacaacgcttggccagtgc 38166074  T
Q  835 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 899  Q
    |||||  | |||||||||||||||||||||||  | |||||||| |||| ||||||||| |||||    
T  38166075 gcatggctctacgcacgagccggattagtcgcccacctttggtgggtcggaaaccggtgcgaaag 38166139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 736 - 865
Target Start/End: Original strand, 1446774 - 1446904
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 834  Q
    |||||||||| ||| ||||||||||||| || |||||||||| ||||||| |||| ||| | | |||||||| ||| || |||||||  ||||||| |||    
T  1446774 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgattcccagggggaacaacacttggccagtgc 1446873  T
Q  835 gcatgcatttacgcacgagccggattagtcg 865  Q
    |||||| | |||||| |||||||||||||||    
T  1446874 gcatgcctctacgcatgagccggattagtcg 1446904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 736 - 865
Target Start/End: Original strand, 29895735 - 29895865
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 834  Q
    |||||||||| ||| ||||||||||||| || |||||||||| ||||||| |||| ||| | | |||||||| ||| || |||||||  ||||||| |||    
T  29895735 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgattcccagggggaacaacacttggccagtgc 29895834  T
Q  835 gcatgcatttacgcacgagccggattagtcg 865  Q
    |||||| | |||||| |||||||||||||||    
T  29895835 gcatgcctctacgcatgagccggattagtcg 29895865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 736 - 861
Target Start/End: Original strand, 53599008 - 53599134
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 834  Q
    |||||||||| ||| |||||| |||||| || |||||||||| ||||||  |||| ||| | | |||||||| ||||||| ||||||||||||||| |||    
T  53599008 aaccaagttgtttgggctccattggcaaggagctccttccaaggacgtacccggggaataccgggttcgattcccaggaggaacaacgtttggccagtgc 53599107  T
Q  835 gcatgcatttacgcacgagccggatta 861  Q
    |||||| | |||||| |||||||||||    
T  53599108 gcatgcctctacgcatgagccggatta 53599134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 736 - 893
Target Start/End: Complemental strand, 1940937 - 1940782
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 834  Q
    |||||||||| ||| |||| |||||||| || |||||||||| ||||||  ||||||||   | |||||||| ||||| | ||||||| ||||    |||    
T  1940937 aaccaagttgtttgggctctagtggcaaggagctccttccaaggacgtacccgggaaatatcgggttcgattcccagggggaacaacgcttggg---tgc 1940841  T
Q  835 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtg 893  Q
    |||||| | |||||||||||||||||||||||  | |||||||| ||||||||||||||    
T  1940840 gcatgcctctacgcacgagccggattagtcgcccacctttggtgggtcgaaaaccggtg 1940782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 736 - 899
Target Start/End: Original strand, 47078406 - 47078570
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 834  Q
    |||||||||| ||| | ||||||||||| || |||||||||| ||||||  |||| ||| | | |||||||| ||||| | ||||||| ||||||| |||    
T  47078406 aaccaagttgcttgggttccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattcccagggggaacaacgcttggccagtgc 47078505  T
Q  835 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 899  Q
     ||||| | |||||||||||||||||||||||  | | |||||| |||| ||||| ||| |||||    
T  47078506 acatgcctctacgcacgagccggattagtcgctcaccattggtgggtcggaaaccagtgcgaaag 47078570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 751 - 866
Target Start/End: Complemental strand, 15840082 - 15839967
Alignment:
Q  751 gctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcgcatgcatttacgcac 850  Q
    ||||||||||||| || |||||||||| |||||| | ||| ||| | | |||||||| | || |||| |||||||||||| ||||||||| | ||||||     
T  15840082 gctccagtggcaaggagctccttccaaggacgtacttggggaataccgggttcgattcctagaagaataacgtttggccagtgcgcatgcctctacgcat 15839983  T
Q  851 gagccggattagtcgc 866  Q
    ||||||||||||||||    
T  15839982 gagccggattagtcgc 15839967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 736 - 901
Target Start/End: Original strand, 27248376 - 27248540
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccagga-gaacaacgtttggccattgc 834  Q
    |||||||||| ||| ||||||||||||| || |||||||||| ||||||| |||| ||| | | |||||| | |||||| |||||||| |||||||  ||    
T  27248376 aaccaagttgcttgggctccagtggcaacgagctccttccaaggacgtatccggggaataccgggttcgagtcccaggaggaacaacgcttggcca--gc 27248473  T
Q  835 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaagaa 901  Q
    |||||| | |||||| ||||| ||||||||||  | |||||||  |||  |||| ||||||||||||    
T  27248474 gcatgcctctacgcaggagccagattagtcgcccacctttggtaggtcagaaactggtgtgaaagaa 27248540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 736 - 866
Target Start/End: Complemental strand, 48317438 - 48317307
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccagga-gaacaacgtttggccattgc 834  Q
    |||||||||| ||| ||||||||||||| || ||| |||||| ||||||||||  |||| |||  |||||||| ||||| |||||||| |||| || ||     
T  48317438 aaccaagttgcttgggctccagtggcaaagagctcattccaatgacgtattcgaaaaatactggattcgattttcaggaggaacaacgcttggtcagtgt 48317339  T
Q  835 gcatgcatttacgcacgagccggattagtcgc 866  Q
    | |||| | |||||||||||||||||||||||    
T  48317338 gtatgcctctacgcacgagccggattagtcgc 48317307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 736 - 865
Target Start/End: Original strand, 43458561 - 43458691
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccagga-gaacaacgtttggccattgc 834  Q
    |||||||||| ||| |||||||||||||  | ||| |||||| |||||||| ||| ||| |||  ||||||| |||||| ||| |||| ||||||| |||    
T  43458561 aaccaagttgcttgggctccagtggcaagaagctcattccaaggacgtatttggggaatactggattcgattcccaggaggaagaacgcttggccagtgc 43458660  T
Q  835 gcatgcatttacgcacgagccggattagtcg 865  Q
    |||||| | |||| |||||||||||||||||    
T  43458661 gcatgcctctacggacgagccggattagtcg 43458691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 739 - 863
Target Start/End: Original strand, 29588687 - 29588812
Alignment:
Q  739 caagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgcgca 837  Q
    ||||||||||| ||||||||||||| || ||| ||||||||||||   |||||||| | | |||||||| ||||| | ||||| | ||||| | ||||||    
T  29588687 caagttgattgggctccagtggcaaggagctcattccaaagacgtgcccgggaaataccgggttcgattcccaggggaaacaaagcttggctagtgcgca 29588786  T
Q  838 tgcatttacgcacgagccggattagt 863  Q
    ||| | ||||||||||||||||||||    
T  29588787 tgcctctacgcacgagccggattagt 29588812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 740 - 899
Target Start/End: Complemental strand, 5473007 - 5472847
Alignment:
Q  740 aagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaa-caacgtttggccattgcgcat 838  Q
    |||||| ||| ||||||||||||| || ||| || ||| ||||||| |||| ||| |   ||| ||||  |||| ||| ||||| ||||||| |||||||    
T  5473007 aagttgtttgggctccagtggcaaggagctcatttcaaggacgtatccggggaataccaggtttgattctcaggggaaacaacgcttggccagtgcgcat 5472908  T
Q  839 gcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 899  Q
    || | |||||||||||||||||||||||  | |||||||| ||||||||| |||| |||||    
T  5472907 gcctctacgcacgagccggattagtcgcccacctttggtgggtcgaaaactggtgcgaaag 5472847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 768 - 899
Target Start/End: Complemental strand, 42722708 - 42722576
Alignment:
Q  768 ctccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgc 866  Q
    |||||||||| ||||||  |||||||| | | |||| ||| ||||||| ||||||| ||||||| ||||||||| | |||||| |||||||||||||||     
T  42722708 ctccttccaaggacgtacccgggaaataccgggttcaattcccaggaggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgt 42722609  T
Q  867 atatctttggtgtgtcgaaaaccggtgtgaaag 899  Q
      | |||| ||| |||||||||||||| |||||    
T  42722608 tcacctttagtgggtcgaaaaccggtgcgaaag 42722576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 758 - 865
Target Start/End: Complemental strand, 49260806 - 49260698
Alignment:
Q  758 tggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgcgcatgcatttacgcacgagccg 856  Q
    |||||| ||||||||||||| || |||| |||| ||| |||| ||| ||| ||| || |||||||| ||||||| ||||||||| | |||||||||||||    
T  49260806 tggcaaggaactccttccaaggatgtatccggggaatactgaattcaattcccaaggggaacaacgcttggccagtgcgcatgcctctacgcacgagccg 49260707  T
Q  857 gattagtcg 865  Q
    |||||||||    
T  49260706 gattagtcg 49260698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 736 - 866
Target Start/End: Complemental strand, 3574609 - 3574478
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 834  Q
    |||||||||| ||| ||||||||||||| || |||||||||| ||||||    || ||| | |||||| ||| ||| ||||||||||  ||||||| |||    
T  3574609 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtacctagggaataccgagttcaattcccagggagaacaacacttggccagtgc 3574510  T
Q  835 gcatgcatttacgcacgagccggattagtcgc 866  Q
    |||||| | |||||||||| ||||||||||||    
T  3574509 gcatgcctctacgcacgagtcggattagtcgc 3574478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 769 - 899
Target Start/End: Complemental strand, 7246776 - 7246645
Alignment:
Q  769 tccttccaaagacgtattcgggaaatgctgagttcgatttccag-gagaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgca 867  Q
    ||||||||| ||||||  |||| ||| ||| |||||||| | || | |||||||| ||||||| ||||||||| | |||||| ||||||||||||||||     
T  7246776 tccttccaaggacgtacccggggaatactgggttcgattcctagtgggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgcc 7246677  T
Q  868 tatctttggtgtgtcgaaaaccggtgtgaaag 899  Q
     | |||||||| |||| ||||||||| |||||    
T  7246676 cacctttggtgggtcggaaaccggtgcgaaag 7246645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 736 - 898
Target Start/End: Original strand, 13073486 - 13073649
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 834  Q
    |||||||||| ||| |||| ||||||||||| |||||||||| ||||||   ||  ||| | |||||||||| ||| || |||||| ||||||||| |||    
T  13073486 aaccaagttgtttgggctctagtggcaatgagctccttccaaggacgtacctggagaataccgagttcgattcccatggggaacaatgtttggccagtgc 13073585  T
Q  835 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaa 898  Q
    |||| | | |||||| || || |||||||||  || |||||||| |||| ||||||||| ||||    
T  13073586 gcatacctctacgcatgaaccagattagtcgtttacctttggtgggtcggaaaccggtgcgaaa 13073649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 768 - 899
Target Start/End: Original strand, 21192622 - 21192752
Alignment:
Q  768 ctccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgca 867  Q
    |||||||||| |||||||| ||||||| | | |||||| ||||  | |||||||||| ||||| ||||||||| | |||||||||| ||||||| ||||     
T  21192622 ctccttccaatgacgtatttgggaaataccgggttcgagttccgag-gaacaacgttgggccagtgcgcatgcctctacgcacgagtcggattaatcgcc 21192720  T
Q  868 tatctttggtgtgtcgaaaaccggtgtgaaag 899  Q
     |  ||||||| |||||||||||||| |||||    
T  21192721 cacatttggtgagtcgaaaaccggtgcgaaag 21192752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 736 - 866
Target Start/End: Complemental strand, 41163045 - 41162914
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccag-gagaacaacgtttggccattgc 834  Q
    |||||||||| ||| ||||||||| ||| || |||||||||| ||||||| |||||||| | ||||||||||||||| | |||||||  ||||||| ||     
T  41163045 aaccaagttgcttgggctccagtgacaaggagctccttccaaggacgtatccgggaaataccgagttcgatttccagagggaacaacacttggccagtgt 41162946  T
Q  835 gcatgcatttacgcacgagccggattagtcgc 866  Q
     ||||| | || ||| |||||| |||||||||    
T  41162945 acatgcttctatgcatgagccgaattagtcgc 41162914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 749 - 899
Target Start/End: Complemental strand, 47682531 - 47682381
Alignment:
Q  749 gagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcgcatgcatttacgc 848  Q
    ||||||||| | ||| |||||||||| |||||||||| |||  |||  ||| || ||||  |||| ||| |||||||||||| ||| ||||  | |||||    
T  47682531 gagctccagggacaaggaactccttctaaagacgtatccggagaatattgaatttgattctcaggggaataacgtttggccagtgcacatgtctctacgc 47682432  T
Q  849 acgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 899  Q
    ||||||||| ||||||||  | |||||||| |||| ||||||||| |||||    
T  47682431 acgagccgggttagtcgcccacctttggtgggtcggaaaccggtgcgaaag 47682381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 737 - 866
Target Start/End: Complemental strand, 49952308 - 49952178
Alignment:
Q  737 accaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgcg 835  Q
    ||||||||| | ||| |||| |||||| || |||||||||| ||||||||||||||||  |  ||| ||||| ||| || |||||||||||| || ||||    
T  49952308 accaagttgttggagttccattggcaaggagctccttccaaggacgtattcgggaaatattaggtttgattttcagaagaaacaacgtttggtcagtgcg 49952209  T
Q  836 catgcatttacgcacgagccggattagtcgc 866  Q
    || || | |||||| ||||||||||||||||    
T  49952208 cacgcctctacgcatgagccggattagtcgc 49952178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 757 - 866
Target Start/End: Complemental strand, 55005448 - 55005338
Alignment:
Q  757 gtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaa-caacgtttggccattgcgcatgcatttacgcacgagcc 855  Q
    |||||||||| ||||||||||||||||||  ||||||| | || |||||||  |||| ||| ||||| ||| ||||||||||||| | ||||||| || |    
T  55005448 gtggcaatgagctccttccaaagacgtatctgggaaataccgaattcgattcgcaggggaaacaacgcttgaccattgcgcatgcctctacgcacaagtc 55005349  T
Q  856 ggattagtcgc 866  Q
    |||||||||||    
T  55005348 ggattagtcgc 55005338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 815 - 899
Target Start/End: Original strand, 17080071 - 17080155
Alignment:
Q  815 gaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 899  Q
    |||||||| ||||||| ||||||||| | |||||| ||||||||||||||||| | ||||| ||  ||||||||||||| |||||    
T  17080071 gaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgcacacctttgatggatcgaaaaccggtgcgaaag 17080155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 736 - 899
Target Start/End: Original strand, 55920982 - 55921146
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 834  Q
    |||||||||| ||| ||||||||||||| || |||||||||| |||| |  |||| ||| | | |||||||| ||| || |||||||  |||| || |||    
T  55920982 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgcacccggggaataccgggttcgattcccagggggaacaacacttggtcagtgc 55921081  T
Q  835 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 899  Q
    |||||| | |||| | ||||||||||| ||||  | |||||||| |||| ||||||||| |||||    
T  55921082 gcatgcctctacgtatgagccggattaatcgctcacctttggtgggtcggaaaccggtgcgaaag 55921146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 736 - 898
Target Start/End: Original strand, 33647669 - 33647832
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 834  Q
    |||||||||| ||| |||| |||||||| || |||||| ||| |||||||  ||| ||| | | |||||||||||| ||||||||||| ||| ||| |||    
T  33647669 aaccaagttgcttgggctctagtggcaaggagctcctttcaaggacgtatctggggaataccgggttcgatttccagggagaacaacgcttgaccagtgc 33647768  T
Q  835 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaa 898  Q
     ||| | | ||||||||| || |||||||||   ||||||||||  ||| ||||||||| ||||    
T  33647769 acattcctctacgcacgaaccagattagtcgttcatctttggtggatcggaaaccggtgcgaaa 33647832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 747 - 866
Target Start/End: Complemental strand, 36262917 - 36262799
Alignment:
Q  747 ttgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcgcatgcatttac 846  Q
    |||||||||||||||||  | |||||||||| ||||||  |||  ||| | | |||||||| ||||| |||||||| ||||||| ||| ||||| | |||    
T  36262917 ttgagctccagtggcaagaagctccttccaaggacgtacccggagaataccgggttcgattcccagg-gaacaacgcttggccagtgcacatgcctctac 36262819  T
Q  847 gcacgagccggattagtcgc 866  Q
    ||||||| ||||||||||||    
T  36262818 gcacgagtcggattagtcgc 36262799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 751 - 865
Target Start/End: Complemental strand, 295680 - 295566
Alignment:
Q  751 gctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcgcatgcatttacgcac 850  Q
    ||||||||||||| |||| ||||| || ||||||| |||| ||| |    ||||||| ||||  |||||||||||||||| ||||||||| | |||||||    
T  295680 gctccagtggcaaggaacaccttctaaggacgtatccggggaataccagattcgattcccagaggaacaacgtttggccagtgcgcatgcctctacgcac 295581  T
Q  851 gagccggattagtcg 865  Q
    || || |||||||||    
T  295580 gaaccagattagtcg 295566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 752 - 865
Target Start/End: Original strand, 20354601 - 20354715
Alignment:
Q  752 ctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccagg-agaacaacgtttggccattgcgcatgcatttacgcac 850  Q
    |||||||||||| || |||||||||| |||| | |||  |||| | ||||| |||||||||| ||||||||| ||||| | ||||||||| | ||||||     
T  20354601 ctccagtggcaaggatctccttccaaggacgaactcgaaaaataccgagtttgatttccagggagaacaacgcttggctagtgcgcatgcctctacgcat 20354700  T
Q  851 gagccggattagtcg 865  Q
    ||| |||||||||||    
T  20354701 gagtcggattagtcg 20354715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 798 - 866
Target Start/End: Complemental strand, 20532510 - 20532441
Alignment:
Q  798 gagttcgatttccagga-gaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgc 866  Q
    ||||||||||||||||| |||||||| ||||||| ||||||||| | |||||| ||||||||| ||||||    
T  20532510 gagttcgatttccaggaggaacaacgcttggccagtgcgcatgcctctacgcatgagccggataagtcgc 20532441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 751 - 898
Target Start/End: Complemental strand, 40781009 - 40780861
Alignment:
Q  751 gctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatt-tccaggagaacaacgtttggccattgcgcatgcatttacgca 849  Q
    ||||||||||||| || || |||  || ||||||||||| ||||   | |||||||| || ||| |||||||| |||| || ||||||||| | ||||||    
T  40781009 gctccagtggcaaggagcttcttttaaggacgtattcggaaaatatcgggttcgattctcaaggggaacaacgcttggtcagtgcgcatgcctctacgca 40780910  T
Q  850 cgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaa 898  Q
     |||||||||||||||   | |||||||| |||| ||||||||| ||||    
T  40780909 tgagccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaa 40780861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 771 - 893
Target Start/End: Complemental strand, 3159597 - 3159474
Alignment:
Q  771 cttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcata 869  Q
    ||||||| ||||||| |||  ||| | | |||||| ||||||| | ||||||| ||||||| ||||||||| | |||||||||||| ||||||||||  |    
T  3159597 cttccaaggacgtatccggagaataccgggttcgacttccagggggaacaacgcttggccagtgcgcatgcctctacgcacgagccagattagtcgctca 3159498  T
Q  870 tctttggtgtgtcgaaaaccggtg 893  Q
     | |||||| |||| |||||||||    
T  3159497 ccattggtgggtcggaaaccggtg 3159474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 736 - 866
Target Start/End: Complemental strand, 12703708 - 12703577
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccag-gagaacaacgtttggccattgc 834  Q
    |||||||||| ||| ||||||||||||| ||  |||||| || |||||| ||| | ||| ||||||||||||||||| | |||||||| ||| ||| ||     
T  12703708 aaccaagttgcttgggctccagtggcaaggagatccttcaaaggacgtactcgaggaatactgagttcgatttccagtgggaacaacgcttgaccagtgt 12703609  T
Q  835 gcatgcatttacgcacgagccggattagtcgc 866  Q
    | |||  | ||||||  |||||||||||||||    
T  12703608 gtatgtctctacgcataagccggattagtcgc 12703577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 822 - 901
Target Start/End: Original strand, 14567274 - 14567353
Alignment:
Q  822 gtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaagaa 901  Q
    ||||||||| ||||||||| | |||||||||||||||||||||||    |||||||| |||| ||| ||||| |||||||    
T  14567274 gtttggccagtgcgcatgcctctacgcacgagccggattagtcgctcgcctttggtgggtcggaaatcggtgcgaaagaa 14567353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 752 - 865
Target Start/End: Original strand, 20128273 - 20128387
Alignment:
Q  752 ctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgcgcatgcatttacgcac 850  Q
    |||||| ||||| ||  ||||||||| ||||||| |||| ||| ||| ||||||||  |||| | ||||| | ||||||| ||||||||| |||||||||    
T  20128273 ctccagcggcaaggagttccttccaaggacgtatccggggaatactgggttcgattctcagggggaacaatgcttggccagtgcgcatgcctttacgcac 20128372  T
Q  851 gagccggattagtcg 865  Q
    ||||  |||||||||    
T  20128373 gagctagattagtcg 20128387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 736 - 861
Target Start/End: Original strand, 38075381 - 38075507
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 834  Q
    |||||||||| ||| ||||||| ||||| ||  ||||||||| |||||||||||  ||| | | ||||||||  |||| | ||||||| ||||||| |||    
T  38075381 aaccaagttgtttgggctccagcggcaaggagttccttccaaggacgtattcggagaataccgggttcgattctcaggggaaacaacgcttggccagtgc 38075480  T
Q  835 gcatgcatttacgcacgagccggatta 861  Q
    |||||| | |||||| |||||| ||||    
T  38075481 gcatgcctctacgcatgagccgaatta 38075507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 736 - 785
Target Start/End: Complemental strand, 19651608 - 19651559
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtat 785  Q
    |||||||||| ||| |||||||||||||||| |||||||||| |||||||    
T  19651608 aaccaagttgtttgggctccagtggcaatgagctccttccaaggacgtat 19651559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 741 - 861
Target Start/End: Original strand, 20421727 - 20421847
Alignment:
Q  741 agttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgcgcatg 839  Q
    ||||| ||| ||| ||||||||| || |||||| |||||||||||  ||| ||| ||| |||||||||||| || |||||||  ||||||| ||||||||    
T  20421727 agttgcttgggcttcagtggcaaggagctcctttcaaagacgtatctggggaatactg-gttcgatttccagggggaacaacacttggccagtgcgcatg 20421825  T
Q  840 catttacgcacgagccggatta 861  Q
    | | |||||| ||||| |||||    
T  20421826 cctctacgcatgagccagatta 20421847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 815 - 887
Target Start/End: Original strand, 8424582 - 8424654
Alignment:
Q  815 gaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaa 887  Q
    |||||||||||||||| ||||||||| | || |||||||||  |||| ||||  |||||||||| ||||||||    
T  8424582 gaacaacgtttggccagtgcgcatgcctctatgcacgagccaaattaatcgctcatctttggtgggtcgaaaa 8424654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 736 - 899
Target Start/End: Original strand, 8888970 - 8889134
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 834  Q
    |||||||||| ||| |||| || ||||| || ||||||| || ||||||| |||| ||| | | |||||||| | ||| | ||||||  |||| || |||    
T  8888970 aaccaagttgtttgggctctagcggcaaggagctccttctaaggacgtatccggggaataccgggttcgattcctagggggaacaacacttgggcagtgc 8889069  T
Q  835 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 899  Q
    |||||  | |||||| |||||||||||||||   | |||||||| |||| |||||||||| ||||    
T  8889070 gcatggctctacgcatgagccggattagtcgtccacctttggtgggtcggaaaccggtgtaaaag 8889134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 815 - 899
Target Start/End: Original strand, 14124044 - 14124128
Alignment:
Q  815 gaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 899  Q
    ||||||| |||||||| ||||||||| | ||| |||||||||||||||||||  | | |||||| || | ||||||||| |||||    
T  14124044 gaacaacatttggccagtgcgcatgcctctacacacgagccggattagtcgctcaccattggtgggttggaaaccggtgcgaaag 14124128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 815 - 899
Target Start/End: Original strand, 30317261 - 30317345
Alignment:
Q  815 gaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 899  Q
    |||||||| ||||||| | || |||| | ||||||||||||| |||||||||  | |||||||| |||| |||||| ||||||||    
T  30317261 gaacaacgcttggccagtacgaatgcctctacgcacgagccgaattagtcgcccacctttggtgggtcggaaaccgatgtgaaag 30317345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 769 - 863
Target Start/End: Complemental strand, 48015203 - 48015108
Alignment:
Q  769 tccttccaaagacgtattcgggaaatgctgagttcgatttccag-gagaacaacgtttggccattgcgcatgcatttacgcacgagccggattagt 863  Q
    ||||||||||||||||  || | ||| | | |||||||| |||| | |||||||| ||||||| |||||| || | ||||||||||||||||||||    
T  48015203 tccttccaaagacgtacccgaggaataccgggttcgattcccagtgggaacaacgcttggccagtgcgcaagcctctacgcacgagccggattagt 48015108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 834 - 901
Target Start/End: Original strand, 54946296 - 54946363
Alignment:
Q  834 cgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaagaa 901  Q
    ||||||| | |||||| ||||||||||||||||  ||| |||||| |||| ||||||| |||||||||    
T  54946296 cgcatgcctctacgcatgagccggattagtcgcccatcattggtgggtcggaaaccggcgtgaaagaa 54946363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 812 - 866
Target Start/End: Original strand, 50485968 - 50486022
Alignment:
Q  812 ggagaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgc 866  Q
    ||||||||||| |||||||   ||||||| | |||||||||||||||||||||||    
T  50485968 ggagaacaacgattggccagaacgcatgcctctacgcacgagccggattagtcgc 50486022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 736 - 773
Target Start/End: Original strand, 4736545 - 4736582
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactcctt 773  Q
    |||||||||| |||||||||||||||||||| ||||||    
T  4736545 aaccaagttgtttgagctccagtggcaatgagctcctt 4736582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 61; Significance: 1e-25; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 736 - 899
Target Start/End: Complemental strand, 14107521 - 14107357
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccagga-gaacaacgtttggccattgc 834  Q
    |||||||||| ||| ||||||||||||| || ||||||||||||||||||||||| ||| | | |||||||| |||||| |||||||| ||| ||| |||    
T  14107521 aaccaagttgtttgggctccagtggcaaggagctccttccaaagacgtattcggggaataccgggttcgattcccaggaggaacaacgcttgaccagtgc 14107422  T
Q  835 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 899  Q
     ||||| | |||||| ||||||||||||||||  ||  || ||| |||| ||||||||| |||||    
T  14107421 acatgcctctacgcatgagccggattagtcgcccattattagtgggtcggaaaccggtgcgaaag 14107357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 736 - 899
Target Start/End: Original strand, 21898595 - 21898759
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccagga-gaacaacgtttggccattgc 834  Q
    |||||||||| ||| ||||||||||||| || |||||||||| ||||||| |||| ||| | | |||||||| |||||| |||||||| ||||||| |||    
T  21898595 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgattcccaggaggaacaacgcttggccagtgc 21898694  T
Q  835 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 899  Q
    |||||| | |||||| |||||||||||||||   | |||| ||| |||| ||||||||| |||||    
T  21898695 gcatgcctctacgcatgagccggattagtcgttcacctttagtgggtcggaaaccggtgcgaaag 21898759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 736 - 865
Target Start/End: Complemental strand, 2271464 - 2271336
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcg 835  Q
    |||||||||| ||| ||||||||||||| || |||||||||| |||||||||||| ||| | | ||||||||  || |||||||||| || |||| ||||    
T  2271464 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtattcggggaataccgggttcgattctca-gagaacaacgcttagccagtgcg 2271366  T
Q  836 catgcatttacgcacgagccggattagtcg 865  Q
    ||||  | ||||||||||||||||||||||    
T  2271365 catgtctctacgcacgagccggattagtcg 2271336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 736 - 865
Target Start/End: Complemental strand, 29333301 - 29333172
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcg 835  Q
    |||||||||| ||| |||| ||||||||||| |||||||||| ||||||  | || ||| | | |||||||||||||| |||||||||||||||| ||||    
T  29333301 aaccaagttgtttgggctctagtggcaatgagctccttccaaggacgtacccagggaataccgggttcgatttccaggggaacaacgtttggccagtgcg 29333202  T
Q  836 catgcatttacgcacgagccggattagtcg 865  Q
    ||||| | |||||| |||||| || |||||    
T  29333201 catgcctctacgcatgagccgaatcagtcg 29333172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 736 - 899
Target Start/End: Complemental strand, 5253386 - 5253222
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 834  Q
    |||||||||| ||| |||||| |||||| || |||||||||| ||||||  |||| ||| | | |||||||| ||||| | ||||||  ||||||| |||    
T  5253386 aaccaagttgcttgggctccaatggcaaggagctccttccaaggacgtacccggggaataccgggttcgattcccagggggaacaacacttggccagtgc 5253287  T
Q  835 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 899  Q
    |||||| | |||||| ||||||||||| ||||  | |||||||| |||| ||||||||| |||||    
T  5253286 gcatgcctctacgcatgagccggattaatcgcccacctttggtgggtcggaaaccggtgcgaaag 5253222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 736 - 901
Target Start/End: Original strand, 8938658 - 8938824
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccagga-gaacaacgtttggccattgc 834  Q
    |||||||||| ||| ||||||||| ||| || |||||||||||||| ||| |||| ||| ||  |||||||| |||||| |||||||  ||| ||| |||    
T  8938658 aaccaagttgtttgggctccagtgacaaggagctccttccaaagacatatccggggaatacttggttcgattcccaggaggaacaacacttgaccagtgc 8938757  T
Q  835 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaagaa 901  Q
    ||| |||| |||||| |||||| ||||||||   | ||||| || |||| ||||||||| |||||||    
T  8938758 gcaagcatctacgcatgagccgaattagtcgtccacctttgatgggtcggaaaccggtgcgaaagaa 8938824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 758 - 899
Target Start/End: Original strand, 12606399 - 12606541
Alignment:
Q  758 tggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgcgcatgcatttacgcacgagccg 856  Q
    ||||||||| ||||||||||  |||||| |||| ||| |    ||||||||||||| | ||||||||||||||| ||||||||| | |||||||||||||    
T  12606399 tggcaatgagctccttccaagaacgtatccggggaataccagattcgatttccagggggaacaacgtttggccagtgcgcatgcctctacgcacgagccg 12606498  T
Q  857 gattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 899  Q
    ||||||||||  | |||||||| |  | ||||||||| |||||    
T  12606499 gattagtcgcccacctttggtgagctggaaaccggtgcgaaag 12606541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 739 - 899
Target Start/End: Original strand, 3601034 - 3601195
Alignment:
Q  739 caagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgcgca 837  Q
    ||||||| ||| |||| |||||||| || ||| ||||||| ||||||||||| ||| | |  |||||||  |||| | ||||||| ||||||| ||||||    
T  3601034 caagttgcttgggctctagtggcaaagagctctttccaaatacgtattcggggaataccggtttcgattctcagggggaacaacgcttggccagtgcgca 3601133  T
Q  838 tgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 899  Q
    ||| | ||| ||||||||||||||||||   | |||||||| |||| ||||||||| |||||    
T  3601134 tgcctatacacacgagccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaag 3601195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 815 - 899
Target Start/End: Complemental strand, 9633708 - 9633624
Alignment:
Q  815 gaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 899  Q
    |||||||| ||||||| ||||||||| | |||||||||||||||||||||||  | |||||||| |||| ||||||||| |||||    
T  9633708 gaacaacgcttggccagtgcgcatgcctctacgcacgagccggattagtcgcccacctttggtgggtcggaaaccggtgcgaaag 9633624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 801 - 893
Target Start/End: Original strand, 13391299 - 13391391
Alignment:
Q  801 ttcgatttccaggagaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtg 893  Q
    |||||||| |||| |||||| ||||||||| ||||||||| | |||||||||||||||||||||||  || |||  || ||||||||||||||    
T  13391299 ttcgattttcaggggaacaatgtttggccagtgcgcatgcctctacgcacgagccggattagtcgcccatatttaatgggtcgaaaaccggtg 13391391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 815 - 899
Target Start/End: Complemental strand, 30788936 - 30788852
Alignment:
Q  815 gaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 899  Q
    |||||||||||||||| ||||||||| | || ||||||||||||||||||||  | |||||||| |||| ||||||||| |||||    
T  30788936 gaacaacgtttggccagtgcgcatgcctctaggcacgagccggattagtcgcccacctttggtgggtcggaaaccggtgcgaaag 30788852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 739 - 865
Target Start/End: Complemental strand, 13036164 - 13036037
Alignment:
Q  739 caagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgcgca 837  Q
    ||||||| ||| ||||||||||||| || |||||||||| |||||||||||| |||   | ||||||||| || || |||||||  ||||||| ||||||    
T  13036164 caagttgcttgggctccagtggcaaggagctccttccaaggacgtattcggggaatatcgggttcgattttcagggggaacaacacttggccagtgcgca 13036065  T
Q  838 tgcatttacgcacgagccggattagtcg 865  Q
    ||| | |||||| ||||| |||||||||    
T  13036064 tgcctctacgcatgagccagattagtcg 13036037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 736 - 865
Target Start/End: Complemental strand, 19230720 - 19230592
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcg 835  Q
    |||||||||| ||| ||||||||||||| || |||||||||| |||||| |||||||   | || |||||||| || | |||||||| |||| || |  |    
T  19230720 aaccaagttgtttgggctccagtggcaaggagctccttccaaggacgtactcgggaataccgga-ttcgattttcaagggaacaacgcttggtcagtatg 19230622  T
Q  836 catgcatttacgcacgagccggattagtcg 865  Q
    ||||| | ||||||||||||||||||||||    
T  19230621 catgcctctacgcacgagccggattagtcg 19230592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 736 - 888
Target Start/End: Complemental strand, 29444928 - 29444775
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 834  Q
    |||||||||  ||| |||| |||||||| || |||||||||||||||||  ||||  || | | |||||||||| ||| | ||||||| ||||||| |||    
T  29444928 aaccaagttacttgggctctagtggcaaggagctccttccaaagacgtacccgggggataccgggttcgatttctagggggaacaacgcttggccagtgc 29444829  T
Q  835 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaac 888  Q
    |||||| | |||||| ||||||||||||| |   |||||||||| |||| ||||    
T  29444828 gcatgcctctacgcatgagccggattagttgtccatctttggtgggtcggaaac 29444775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 736 - 899
Target Start/End: Complemental strand, 8612137 - 8611973
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 834  Q
    |||||||||| |||  |||||||||||| || |||||||||| ||||||  |||| ||| | | |||||||| | ||||| ||||||| ||| ||| ||     
T  8612137 aaccaagttgtttggactccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattccgaggaggaacaacgcttgaccagtgt 8612038  T
Q  835 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 899  Q
    |||||| | |||||| || |||||||||||||  | |||||||| |||  ||||||||| |||||    
T  8612037 gcatgcttctacgcatgaaccggattagtcgcccacctttggtgggtcagaaaccggtgcgaaag 8611973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 735 - 899
Target Start/End: Original strand, 19089444 - 19089609
Alignment:
Q  735 gaaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattg 833  Q
    ||||||||||| ||| |||||||| |||| || ||| || ||| ||||||| || | ||| |   ||| |||| ||||| | ||||||  ||||||| ||    
T  19089444 gaaccaagttgcttgggctccagtcgcaaggagctcatttcaaggacgtatccgaggaataccaggtttgattcccagggggaacaacacttggccagtg 19089543  T
Q  834 cgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 899  Q
     |||||| | ||||||||||||||||||||||  || |||||||| |||| ||||||||| |||||    
T  19089544 agcatgcctctacgcacgagccggattagtcgtctacctttggtgggtcggaaaccggtgcgaaag 19089609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 736 - 784
Target Start/End: Original strand, 5759575 - 5759623
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgta 784  Q
    |||||||||| ||| ||||||||||||| ||||||||||||| ||||||    
T  5759575 aaccaagttgcttgggctccagtggcaaggaactccttccaaggacgta 5759623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 736 - 899
Target Start/End: Complemental strand, 6606260 - 6606096
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 834  Q
    |||||||||| ||| ||  ||||||||| || |||||||||| ||||||| |||| ||| | | ||||||||  |||| | ||||||  ||||||| ||     
T  6606260 aaccaagttgcttgggccacagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgattctcagggggaacaacacttggccagtgt 6606161  T
Q  835 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 899  Q
     ||||| | |||||| |||||||||||||||   | | |||||| |||| ||||||||| |||||    
T  6606160 acatgcctctacgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaag 6606096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 736 - 899
Target Start/End: Original strand, 8932608 - 8932772
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 834  Q
    |||||||||| |||| |||||||||||| ||  ||||||||| || |||| |||| |||   | |||||||| ||| || |||||||  ||||| | |||    
T  8932608 aaccaagttgtttgaactccagtggcaaggagttccttccaaggatgtatccggggaatatcgggttcgattcccagggggaacaacacttggctagtgc 8932707  T
Q  835 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 899  Q
    |||||| | |||||| ||||||||||| || |  | ||||| || |||| ||||||||| |||||    
T  8932708 gcatgcctctacgcatgagccggattaatcacccacctttgatgggtcggaaaccggtgcgaaag 8932772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 736 - 899
Target Start/End: Original strand, 8944074 - 8944238
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 834  Q
    |||||||||| |||| |||||||||||| ||  ||||||||| || |||| |||| |||   | |||||||| ||| || |||||||  ||||| | |||    
T  8944074 aaccaagttgtttgaactccagtggcaaggagttccttccaaggatgtatccggggaatatcgggttcgattcccagggggaacaacacttggctagtgc 8944173  T
Q  835 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 899  Q
    |||||| | |||||| ||||||||||| || |  | ||||| || |||| ||||||||| |||||    
T  8944174 gcatgcctctacgcatgagccggattaatcacccacctttgatgggtcggaaaccggtgcgaaag 8944238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 812 - 899
Target Start/End: Original strand, 5029841 - 5029928
Alignment:
Q  812 ggagaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 899  Q
    |||||||||||||||| || ||||||||| | |||||| |||  |||||||||||  ||||||| || |||| |||| |||| |||||    
T  5029841 ggagaacaacgtttggtcagtgcgcatgcctctacgcatgagttggattagtcgcccatctttgatgggtcggaaactggtgcgaaag 5029928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 59; Significance: 2e-24; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 736 - 865
Target Start/End: Original strand, 5855466 - 5855596
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccagga-gaacaacgtttggccattgc 834  Q
    |||||||||| ||| ||||||||||||| || |||||||||| |||||||||||| ||| | | |||||||| |||||| |||||||| ||||||| |||    
T  5855466 aaccaagttgtttgggctccagtggcaaggagctccttccaaggacgtattcggggaataccgggttcgattcccaggaggaacaacgcttggccagtgc 5855565  T
Q  835 gcatgcatttacgcacgagccggattagtcg 865  Q
    |||||| | |||||| ||| |||||||||||    
T  5855566 gcatgcctctacgcatgaggcggattagtcg 5855596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 736 - 899
Target Start/End: Original strand, 10422732 - 10422896
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccagga-gaacaacgtttggccattgc 834  Q
    |||||||||| ||| ||| ||||||||| || |||||||||| |||||||||||| ||| | | |||||||||| |||| |||||||  ||||||| |||    
T  10422732 aaccaagttgtttgggctacagtggcaaggagctccttccaatgacgtattcggggaataccgggttcgatttctaggaggaacaacacttggccagtgc 10422831  T
Q  835 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 899  Q
    |||||| | |||||| |||||||||||||||   | |||||||  |||| ||||||||| |||||    
T  10422832 gcatgcctctacgcatgagccggattagtcgtccacctttggtaagtcggaaaccggtgcgaaag 10422896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 752 - 865
Target Start/End: Complemental strand, 14254416 - 14254302
Alignment:
Q  752 ctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgcgcatgcatttacgcac 850  Q
    |||||| ||||| |||||| |||||| |||||||||||| ||| | ||||||||||| |||| | ||||||| ||||||| | ||||||| ||||||||     
T  14254416 ctccaggggcaaggaactcattccaaggacgtattcggggaataccgagttcgattttcagggggaacaacgcttggccagtacgcatgcctttacgcat 14254317  T
Q  851 gagccggattagtcg 865  Q
    |||||||||||||||    
T  14254316 gagccggattagtcg 14254302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 736 - 889
Target Start/End: Complemental strand, 40288641 - 40288487
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 834  Q
    |||||||||| ||| |||| |||||||| || ||| |||||| |||||||||||| ||| | | |||||||||||| || |||||||| ||||||| |      
T  40288641 aaccaagttgcttgggctcgagtggcaaggagctctttccaaggacgtattcggggaataccgggttcgatttccagggggaacaacggttggccagtat 40288542  T
Q  835 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaacc 889  Q
    |||||| | ||| |||||||||||||||||||  ||| |||||| |||| |||||    
T  40288541 gcatgcctctacacacgagccggattagtcgctcatccttggtgggtcggaaacc 40288487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 751 - 899
Target Start/End: Complemental strand, 9659327 - 9659179
Alignment:
Q  751 gctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcgcatgcatttacgcac 850  Q
    ||||||||||||| || ||| ||| || |||||| ||||| ||| | | |||||||| ||||| |||||||||||| | | ||||||||| ||||||||     
T  9659327 gctccagtggcaaggagctcattctaaggacgtactcggggaataccgggttcgattcccaggggaacaacgtttgactagtgcgcatgcctttacgcat 9659228  T
Q  851 gagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 899  Q
    |||||||||||||||   | |||||||| || | ||||||||| |||||    
T  9659227 gagccggattagtcgtccacctttggtgggttggaaaccggtgcgaaag 9659179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 736 - 899
Target Start/End: Complemental strand, 17642168 - 17642004
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 834  Q
    |||||||||| ||| ||||||||| ||| || |||||||||  ||||||  | |||||| ||| |||||||| ||||| | ||||||  ||||||| |||    
T  17642168 aaccaagttgtttgggctccagtgacaaggagctccttccacggacgtacccaggaaatactgggttcgattcccagggggaacaacacttggccagtgc 17642069  T
Q  835 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 899  Q
    |||||| | ||||||||||||||||||||||   | |||||||| |||| |||| |||| |||||    
T  17642068 gcatgcctctacgcacgagccggattagtcgtccacctttggtgggtcggaaactggtgcgaaag 17642004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 736 - 899
Target Start/End: Complemental strand, 11398052 - 11397889
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcg 835  Q
    |||||||||| ||| ||||||||||||| || |||||||||| || |||| |||  ||| | | |||||||| | ||| |||||||||||||||| ||||    
T  11398052 aaccaagttgcttgggctccagtggcaaggagctccttccaaggatgtatccggagaataccgggttcgattccgaggggaacaacgtttggccaatgcg 11397953  T
Q  836 catgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 899  Q
     |||| | |||||| ||| |||||||||||   | |||||||| |||| ||| ||||| |||||    
T  11397952 tatgcctctacgcatgagtcggattagtcgtccacctttggtgggtcggaaatcggtgcgaaag 11397889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 736 - 865
Target Start/End: Original strand, 49078058 - 49078188
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 834  Q
    |||||||||| ||| ||||||||||||| || ||||||| || ||||||| |||| ||| | | |||||||| ||||| | ||||||  ||||||| |||    
T  49078058 aaccaagttgcttgggctccagtggcaaggagctccttctaaggacgtatccggggaataccgggttcgattcccaggggaaacaacacttggccagtgc 49078157  T
Q  835 gcatgcatttacgcacgagccggattagtcg 865  Q
    |||||| | |||||| |||||||||||||||    
T  49078158 gcatgcctctacgcatgagccggattagtcg 49078188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 736 - 899
Target Start/End: Original strand, 26660082 - 26660245
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 834  Q
    |||||||||| ||| ||||||||||||| ||  | |||| || |||||||||||| ||| | | |||||||||||| || ||||||| ||||  || | |    
T  26660082 aaccaagttgcttgggctccagtggcaaagagtttcttcgaatgacgtattcggggaataccgggttcgatttccacggggaacaacatttgatcagtac 26660181  T
Q  835 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 899  Q
    |||||| | |||||| ||||||||||||||||  | |||||||| |||| ||||||||| |||||    
T  26660182 gcatgcctctacgcatgagccggattagtcgc-cacctttggtgggtcggaaaccggtgcgaaag 26660245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 740 - 899
Target Start/End: Complemental strand, 32151082 - 32150922
Alignment:
Q  740 aagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgcgcat 838  Q
    |||||| ||| ||||||||||||| || |||||||||| ||||| |||| | |||     |||||||||||||| | |||||| ||||| || |||||||    
T  32151082 aagttgtttgggctccagtggcaaggagctccttccaaggacgttttcgaggaatatcaggttcgatttccagggggaacaacatttggtcagtgcgcat 32150983  T
Q  839 gcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 899  Q
    || |||||||| |||||| |||||||||  | ||||| || ||||||||||| || |||||    
T  32150982 gcctttacgcatgagccgaattagtcgctcacctttgatgggtcgaaaaccgatgcgaaag 32150922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 740 - 899
Target Start/End: Complemental strand, 43959981 - 43959821
Alignment:
Q  740 aagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgcgcat 838  Q
    |||||||||| ||||||||||||| |  |||||||||| ||||||  |||| |||   | |||| ||| ||||| | ||||||| ||||||| |||||||    
T  43959981 aagttgattgggctccagtggcaaggtgctccttccaatgacgtacccggggaatatcgggttcaattcccagggggaacaacgcttggccagtgcgcat 43959882  T
Q  839 gcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 899  Q
    || | |||||||||||||||||||||||  | |||| |||  ||| ||||||||| |||||    
T  43959881 gcctctacgcacgagccggattagtcgcccacctttagtggatcggaaaccggtgcgaaag 43959821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 736 - 865
Target Start/End: Complemental strand, 2981095 - 2980965
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccag-gagaacaacgtttggccattgc 834  Q
    |||||||||| ||| |||| |||||||| || |||||||||  ||||||| |||| ||| ||| |||||||| |||| | |||||||  ||||||| ||     
T  2981095 aaccaagttgcttgggctctagtggcaaggagctccttccagggacgtatccggggaatactgggttcgattcccagcgggaacaacacttggccagtgt 2980996  T
Q  835 gcatgcatttacgcacgagccggattagtcg 865  Q
    |||||| | |||||||||| |||||||||||    
T  2980995 gcatgcctctacgcacgagtcggattagtcg 2980965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 736 - 865
Target Start/End: Complemental strand, 17092641 - 17092511
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaa-caacgtttggccattgc 834  Q
    |||||||||| |||| ||| ||||||||  | |||||| ||  ||||||||||||||||   ||||||||||| |||| ||| ||||| ||||||| ||     
T  17092641 aaccaagttgcttgaactctagtggcaagaagctcctttcatggacgtattcgggaaatatcgagttcgattttcaggggaaacaacgattggccagtgt 17092542  T
Q  835 gcatgcatttacgcacgagccggattagtcg 865  Q
    | |||| | ||||||||||||||||||||||    
T  17092541 gtatgcctctacgcacgagccggattagtcg 17092511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 800 - 901
Target Start/End: Complemental strand, 50371934 - 50371832
Alignment:
Q  800 gttcgatttccagga-gaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaa 898  Q
    ||||||||| ||||| |||||||| ||||||| | ||||||| | ||||||| |||||||||||||||  ||||||||||  ||| ||||||||| ||||    
T  50371934 gttcgattttcaggaagaacaacgcttggccagtacgcatgcttctacgcacaagccggattagtcgcccatctttggtggatcggaaaccggtgcgaaa 50371835  T
Q  899 gaa 901  Q
    |||    
T  50371834 gaa 50371832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 743 - 899
Target Start/End: Original strand, 16956417 - 16956574
Alignment:
Q  743 ttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgcgcatgca 841  Q
    ||||||||||| || |||||| || |||||||||| ||||||  |||| ||| | | ||||| ||  |||| | ||||||||||| ||| |||||||||     
T  16956417 ttgattgagcttcaatggcaaggagctccttccaaggacgtacccggggaataccgtgttcggttctcaggggtaacaacgtttgaccagtgcgcatgcc 16956516  T
Q  842 tttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 899  Q
    | ||||||||||||||||||||| |  | |||||||| |||| ||||| ||| |||||    
T  16956517 tctacgcacgagccggattagtcactcacctttggtgggtcggaaaccagtgcgaaag 16956574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 731 - 899
Target Start/End: Original strand, 18915806 - 18915975
Alignment:
Q  731 atatgaaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggcc 829  Q
    |||| |||||||||| ||| ||| ||||||||| || || ||||||| ||||||  |||| ||| | | |||||||| ||||| | ||||||  ||||||    
T  18915806 atattaaccaagttgtttgggcttcagtggcaaggagcttcttccaaggacgtacccggggaataccgggttcgattcccagggggaacaacacttggcc 18915905  T
Q  830 attgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 899  Q
    | || |||||| | |||||||||||||||||||||||  | | |||||| || | ||||||||| |||||    
T  18915906 agtgtgcatgcctctacgcacgagccggattagtcgctcaccattggtgggttggaaaccggtgcgaaag 18915975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 736 - 865
Target Start/End: Complemental strand, 46929901 - 46929772
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcg 835  Q
    |||||||||| ||| |||| ||||||||  | ||||||||||||||||||  ||  |||   ||||||||||||||  ||||||||| ||||||| ||||    
T  46929901 aaccaagttgcttgggctctagtggcaagaagctccttccaaagacgtatctggagaatatcgagttcgatttccaaaagaacaacgcttggccaatgcg 46929802  T
Q  836 catgcatttacgcacgagccggattagtcg 865  Q
    ||||| |  || || |||||||||||||||    
T  46929801 catgcctccacacatgagccggattagtcg 46929772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 736 - 864
Target Start/End: Complemental strand, 48798234 - 48798105
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 834  Q
    |||||||||| | | ||||||||||||| || |||||||||| ||||||| |||| |||   | |||||||||||| || |||||||| ||| | | |||    
T  48798234 aaccaagttgttggggctccagtggcaaggagctccttccaatgacgtatccggggaatatcgggttcgatttccagggggaacaacgcttgactagtgc 48798135  T
Q  835 gcatgcatttacgcacgagccggattagtc 864  Q
    |||||| | |||||| ||||||||||||||    
T  48798134 gcatgcctctacgcatgagccggattagtc 48798105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 736 - 899
Target Start/End: Original strand, 8763935 - 8764099
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 834  Q
    |||||||||| ||| ||||| ||||||| || |||||||||| ||||||  |||| |||   | ||||| || ||||| | ||||||  ||||||| |||    
T  8763935 aaccaagttgcttgggctcccgtggcaaggagctccttccaaggacgtacccggggaatatcgggttcgtttcccagggggaacaacacttggccagtgc 8764034  T
Q  835 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 899  Q
    |||||| | ||||||||||||||||||||||   | | |||||| |||| ||||||||| |||||    
T  8764035 gcatgcctctacgcacgagccggattagtcgtccaccgttggtgggtcggaaaccggtgcgaaag 8764099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 800 - 892
Target Start/End: Complemental strand, 21849304 - 21849212
Alignment:
Q  800 gttcgatttccaggagaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggt 892  Q
    |||||||| ||||| |||||||| ||||| | ||||||||| | |||||||||||||||||||||||  |   |||||| |||||||||||||    
T  21849304 gttcgattcccaggggaacaacgcttggctagtgcgcatgcctctacgcacgagccggattagtcgctcactattggtgggtcgaaaaccggt 21849212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 736 - 899
Target Start/End: Complemental strand, 33004179 - 33004015
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaa-caacgtttggccattgc 834  Q
    |||||||||| ||| |||||||||   | || |||||||||| ||||||| |||| |||   |  ||||||||||||| ||| ||| | ||||||| |||    
T  33004179 aaccaagttgcttgggctccagtgatgaggagctccttccaaggacgtatccggggaatatcggattcgatttccaggggaaacaatgcttggccagtgc 33004080  T
Q  835 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 899  Q
    |||||| | ||||||||||||||||||||| |  | |  ||||| |||||||||||||| |||||    
T  33004079 gcatgcctctacgcacgagccggattagtcacccaccaatggtgggtcgaaaaccggtgcgaaag 33004015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 737 - 899
Target Start/End: Complemental strand, 41664019 - 41663856
Alignment:
Q  737 accaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgcg 835  Q
    ||||||||| ||| ||||||||||||| || ||||||| || ||||||| |||| ||| | | |||||||| ||| || |||||||  |||| || ||||    
T  41664019 accaagttgtttgggctccagtggcaaggagctccttctaaggacgtatccggggaataccgggttcgattcccagggggaacaacacttggtcagtgcg 41663920  T
Q  836 catgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 899  Q
    ||||| | |||||| |||| ||||||||||   | | |||||| |||| ||||||||| |||||    
T  41663919 catgcctctacgcatgagctggattagtcgtccaccattggtgggtcggaaaccggtgcgaaag 41663856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 752 - 865
Target Start/End: Complemental strand, 30927875 - 30927761
Alignment:
Q  752 ctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccag-gagaacaacgtttggccattgcgcatgcatttacgcac 850  Q
    |||||||||||| || |||||||||| ||||||   |||||||   | ||||||||||||| | |||||||| ||||||| || |||||| | ||||||     
T  30927875 ctccagtggcaaggagctccttccaaggacgtacctgggaaatatcgggttcgatttccagagggaacaacgcttggccaatgtgcatgcctctacgcat 30927776  T
Q  851 gagccggattagtcg 865  Q
    |||||||||||||||    
T  30927775 gagccggattagtcg 30927761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 736 - 865
Target Start/End: Complemental strand, 33418279 - 33418149
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 834  Q
    |||||||||| ||| ||||||||||||| || |||||||||||||||||  |||  ||| | |  ||||||| | | || | |||||| ||||||| |||    
T  33418279 aaccaagttgtttgggctccagtggcaaggagctccttccaaagacgtacccggagaataccggattcgattcctaggggggacaacgcttggccagtgc 33418180  T
Q  835 gcatgcatttacgcacgagccggattagtcg 865  Q
    |||||| | || |||||||||||||||||||    
T  33418179 gcatgcctctatgcacgagccggattagtcg 33418149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 739 - 865
Target Start/End: Complemental strand, 47313059 - 47312933
Alignment:
Q  739 caagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcgcat 838  Q
    ||||||| ||| ||||||||||||| ||  ||||||||| |||||||  ||| ||| | | ||| |||| | ||| |||||||||||||||| |||| ||    
T  47313059 caagttgtttgggctccagtggcaacgagatccttccaaggacgtatctggggaataccgggtttgattcctaggggaacaacgtttggccagtgcgtat 47312960  T
Q  839 gcatttacgcacgagccggattagtcg 865  Q
    || | |||||| ||||| |||||||||    
T  47312959 gcctctacgcatgagccagattagtcg 47312933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 739 - 901
Target Start/End: Original strand, 2567223 - 2567386
Alignment:
Q  739 caagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcga-tttccaggagaacaacgtttggccattgcgca 837  Q
    ||||||| ||| ||| || |||||| || |||||||||| |||||||||||  ||| | | |||||| ||||  ||| ||||||| ||||||| ||||||    
T  2567223 caagttgtttgggcttcactggcaaggagctccttccaaggacgtattcggagaataccgggttcgattttcggggaaaacaacgcttggccagtgcgca 2567322  T
Q  838 tgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaagaa 901  Q
    ||| | ||| |||||| | |||||| ||   |||||||||| |||| ||||||||  |||||||    
T  2567323 tgcctctactcacgagtcagattagccgtccatctttggtgggtcggaaaccggtacgaaagaa 2567386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 736 - 890
Target Start/End: Original strand, 15465909 - 15466064
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 834  Q
    |||||||||| ||| ||||||||| ||| |  |||||||||| |||||||| ||| ||| |   |||||||||||| || |||||||| |||| || |||    
T  15465909 aaccaagttgtttgggctccagtgacaaagggctccttccaaggacgtatttggggaataccaggttcgatttccagggggaacaacgcttggtcagtgc 15466008  T
Q  835 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccg 890  Q
     ||||| | |||||||||| | |||| |||||  | |||||||| |||| ||||||    
T  15466009 acatgcctctacgcacgagtctgattggtcgctcacctttggtgggtcggaaaccg 15466064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 800 - 899
Target Start/End: Original strand, 44969673 - 44969772
Alignment:
Q  800 gttcgatttccaggagaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 899  Q
    ||||||||  ||||||||||||| ||||||| || ||||||   |||||| |||||||||||||||   ||| ||||||  ||| |||||||||||||||    
T  44969673 gttcgattctcaggagaacaacgcttggccagtgtgcatgcccctacgcatgagccggattagtcgtccatcattggtggatcggaaaccggtgtgaaag 44969772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 817 - 899
Target Start/End: Original strand, 37339846 - 37339928
Alignment:
Q  817 acaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 899  Q
    |||||| ||||||| ||||||||| |  ||||||||||||||||||||||  | |||||||| || | ||||||||| |||||    
T  37339846 acaacgcttggccagtgcgcatgcctcaacgcacgagccggattagtcgcccacctttggtgggttggaaaccggtgcgaaag 37339928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 814 - 899
Target Start/End: Complemental strand, 10173056 - 10172971
Alignment:
Q  814 agaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 899  Q
    ||||||||| ||||||| ||| ||||| | |||||| ||||||||||| ||||  | |||||||| |||| ||||||||| |||||    
T  10173056 agaacaacgcttggccagtgcccatgcctctacgcatgagccggattactcgcccacctttggtgggtcggaaaccggtgcgaaag 10172971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 753 - 861
Target Start/End: Original strand, 10336477 - 10336586
Alignment:
Q  753 tccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgcgcatgcatttacgcacg 851  Q
    ||||||||||| || |||||||||||||||||| |||  |||   | ||||||||| || || |||||||| ||| ||| ||||||||| | |||||| |    
T  10336477 tccagtggcaaggagctccttccaaagacgtatccggagaatatcgggttcgattttcagggggaacaacgcttgaccagtgcgcatgcctctacgcatg 10336576  T
Q  852 agccggatta 861  Q
    ||||||||||    
T  10336577 agccggatta 10336586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 736 - 899
Target Start/End: Original strand, 26325756 - 26325920
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccag-gagaacaacgtttggccattgc 834  Q
    |||||||||| | | ||||||||||||| || |||||| ||| ||||||| || | |||   | |||||||| |||| | |||||||  |||| || |||    
T  26325756 aaccaagttgctagggctccagtggcaaggagctcctttcaaggacgtatccgaggaatatcgggttcgattcccagcgggaacaacacttggtcagtgc 26325855  T
Q  835 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 899  Q
    |||||| | |||||| |||||||||||||||   | | |||||| |||| ||||||||| |||||    
T  26325856 gcatgcctctacgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaag 26325920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 824 - 899
Target Start/End: Complemental strand, 4581757 - 4581682
Alignment:
Q  824 ttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 899  Q
    ||||||| ||||||||| | ||||||||||||||| ||||||   | |||||||| |||| ||||||||| |||||    
T  4581757 ttggccagtgcgcatgcctctacgcacgagccggaatagtcgtccacctttggtgggtcggaaaccggtgcgaaag 4581682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 800 - 865
Target Start/End: Original strand, 13262091 - 13262157
Alignment:
Q  800 gttcgatttccagg-agaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcg 865  Q
    |||||||||||||| |||||||||||||| || | ||||||  | |||||||||| |||||||||||    
T  13262091 gttcgatttccagggagaacaacgtttggtcaatacgcatgtctctacgcacgagtcggattagtcg 13262157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 740 - 901
Target Start/End: Original strand, 14357703 - 14357865
Alignment:
Q  740 aagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaa-caacgtttggccattgcgcat 838  Q
    |||||| ||||||||||||||||| ||  | ||||||| |||||||  || ||||     ||||||||||||   ||| ||||||||| ||| |||||||    
T  14357703 aagttgcttgagctccagtggcaaggagtttcttccaaggacgtatctggaaaatatcaggttcgatttccaattgaaacaacgtttgaccagtgcgcat 14357802  T
Q  839 gcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaagaa 901  Q
    || | ||||||||| |||||||| |||  || | ||| || |||| ||||||||| |||||||    
T  14357803 gcctctacgcacgaaccggattaatcgtttaccattgatgggtcggaaaccggtgcgaaagaa 14357865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 736 - 860
Target Start/End: Original strand, 34877934 - 34878059
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccagg-agaacaacgtttggccattgc 834  Q
    |||||||||| ||| ||| ||||||||| || | |||||||| |||||||||||| ||| |   |||||||| | |||  |||||||  ||||||| |||    
T  34877934 aaccaagttgtttgggcttcagtggcaaggagcaccttccaaggacgtattcggggaataccaggttcgattcctaggcggaacaacacttggccagtgc 34878033  T
Q  835 gcatgcatttacgcacgagccggatt 860  Q
    |||||| | ||| |||||||| ||||    
T  34878034 gcatgcctctacacacgagccagatt 34878059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 755 - 899
Target Start/End: Complemental strand, 45362027 - 45361882
Alignment:
Q  755 cagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgcgcatgcatttacgcacgag 853  Q
    ||||||||| || |||||||||| ||||||  | || ||| | | ||||||||  |||||| ||||||| ||||||| |||||||||   ||||||  ||    
T  45362027 cagtggcaaggagctccttccaaggacgtaccctgggaataccgggttcgattctcaggaggaacaacgcttggccagtgcgcatgccactacgcataag 45361928  T
Q  854 ccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 899  Q
    ||||||||||||   | |||| ||| |||| ||||||||| |||||    
T  45361927 ccggattagtcgttcacctttagtgggtcggaaaccggtgcgaaag 45361882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 57; Significance: 3e-23; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 731 - 862
Target Start/End: Complemental strand, 4195370 - 4195238
Alignment:
Q  731 atatgaaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccagga-gaacaacgtttggcc 829  Q
    |||| |||||||||| ||| ||||||||||||| || ||||| |||| ||||||| |||| ||| | ||||||||||||||||| ||||||| ||||||     
T  4195370 atatcaaccaagttgcttgggctccagtggcaaggagctcctgccaaggacgtatccggggaataccgagttcgatttccaggaggaacaacatttggct 4195271  T
Q  830 attgcgcatgcatttacgcacgagccggattag 862  Q
    | ||||||||| | |||||| ||||||||||||    
T  4195270 agtgcgcatgcctctacgcatgagccggattag 4195238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 738 - 899
Target Start/End: Original strand, 34659174 - 34659336
Alignment:
Q  738 ccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatt-tccaggagaacaacgtttggccattgcgc 836  Q
    |||||||| ||| ||||||||||||| || |||||||||  || |||  |||| ||| | | |||||||| || ||| |||||||| ||| ||| |||||    
T  34659174 ccaagttgtttgggctccagtggcaaggagctccttccagggatgtacccggggaataccgggttcgattctcaaggggaacaacgcttgaccagtgcgc 34659273  T
Q  837 atgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 899  Q
    |||| | |||||||||||||||||||||||  | | ||||||||||||||||||||| |||||    
T  34659274 atgcctctacgcacgagccggattagtcgcccaccattggtgtgtcgaaaaccggtgcgaaag 34659336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 53; E-Value: 8e-21
Query Start/End: Original strand, 736 - 899
Target Start/End: Original strand, 48804629 - 48804793
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcc-aggagaacaacgtttggccattgc 834  Q
    |||||||||| ||| ||||||||||||| || |||||||||| ||||||| |||| ||| | | |||||||| || ||| |||||||  ||||||| |||    
T  48804629 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgattcccaaggggaacaacacttggccagtgc 48804728  T
Q  835 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 899  Q
    |||||| | |||||| |||||||||||||||   | | |||||| |||| ||||||||| |||||    
T  48804729 gcatgcctctacgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaag 48804793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 736 - 893
Target Start/End: Complemental strand, 5039581 - 5039423
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccagga-gaacaacgtttggccattgc 834  Q
    |||||||||| ||| ||||||||||||| || ||||||||| ||| ||||||||| ||| | |||||||||| | |||| |||||||  |||| || |||    
T  5039581 aaccaagttgtttgggctccagtggcaaggagctccttccatagatgtattcggggaataccgagttcgattcctaggaggaacaacacttggtcagtgc 5039482  T
Q  835 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtg 893  Q
     ||| | | |||||| ||||||||||||||||  | ||||||||  |||||||||||||    
T  5039481 acatacctctacgcatgagccggattagtcgctcacctttggtggatcgaaaaccggtg 5039423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 736 - 899
Target Start/End: Complemental strand, 43346942 - 43346778
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatt-tccaggagaacaacgtttggccattgc 834  Q
    |||||||||| |||  |||||||||||| || ||||||||||||||||||  ||| ||| | | |||| ||| || ||| |||||||  ||||||  |||    
T  43346942 aaccaagttgtttggactccagtggcaaggagctccttccaaagacgtatctggggaataccgggttcaattctcaaggggaacaacacttggccggtgc 43346843  T
Q  835 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 899  Q
    |||||| | |||| ||||||||||||||||||  |||||||||| |||| ||||| ||| |||||    
T  43346842 gcatgcctctacgtacgagccggattagtcgctcatctttggtgggtcggaaaccagtgcgaaag 43346778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 736 - 899
Target Start/End: Complemental strand, 43862135 - 43861971
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 834  Q
    |||||||||| ||| |||| || ||||| || ||| ||||||||||||||  ||| ||| | | |||||||| ||||| | ||||||||||||||| |||    
T  43862135 aaccaagttgtttgggctctagcggcaaggagctctttccaaagacgtatctggggaataccgggttcgattcccagggggaacaacgtttggccagtgc 43862036  T
Q  835 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 899  Q
    |||||| | |||||| ||||||||||||||    | ||||||||  ||||||||||||| |||||    
T  43862035 gcatgcctctacgcatgagccggattagtcattcacctttggtggatcgaaaaccggtgcgaaag 43861971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 739 - 893
Target Start/End: Original strand, 1797409 - 1797564
Alignment:
Q  739 caagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaa-caacgtttggccattgcgca 837  Q
    ||||||| ||| ||||||||||||| || |||||||||| ||||||| || | ||| | | |||||||| ||||| ||| ||||| ||||||| ||||||    
T  1797409 caagttgcttgggctccagtggcaaggagctccttccaaggacgtatccgaggaataccgggttcgattcccaggggaaacaacgcttggccagtgcgca 1797508  T
Q  838 tgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtg 893  Q
    ||  | ||||||||||||||| ||||||   ||||||| ||  |||||||||||||    
T  1797509 tgtctctacgcacgagccggactagtcgtccatctttgatggatcgaaaaccggtg 1797564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 736 - 893
Target Start/End: Original strand, 16802069 - 16802227
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 834  Q
    ||||||||||  || |||||||||||||||| |||||||||| ||||||  |||| ||| | |  |||||||   ||||| ||||||| ||||||| |||    
T  16802069 aaccaagttgcctgggctccagtggcaatgagctccttccaaggacgtacccggggaataccggattcgattcttaggaggaacaacgattggccagtgc 16802168  T
Q  835 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtg 893  Q
    | |||| | |||||||||||||||||||||||  | | |||||| ||||||||| ||||    
T  16802169 gtatgcctctacgcacgagccggattagtcgctcaccattggtgggtcgaaaactggtg 16802227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 736 - 865
Target Start/End: Complemental strand, 17748545 - 17748415
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 834  Q
    |||||||||| ||| |||| ||||||||  | || ||||||| |||||||||||| ||| | | |||||||| ||||| | ||||||| ||||||| |||    
T  17748545 aaccaagttgtttgggctctagtggcaagcagcttcttccaaggacgtattcggggaataccgggttcgattcccagggggaacaacgcttggccagtgc 17748446  T
Q  835 gcatgcatttacgcacgagccggattagtcg 865  Q
    |||||| | |||| |||||||||||||||||    
T  17748445 gcatgcctctacgtacgagccggattagtcg 17748415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 739 - 899
Target Start/End: Complemental strand, 5069975 - 5069814
Alignment:
Q  739 caagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccagga-gaacaacgtttggccattgcgca 837  Q
    ||||||| ||| ||||||||||||| || || |||| || ||||||  |||||||| | | ||||||||||||||| |||||||| || || | || |||    
T  5069975 caagttgtttgggctccagtggcaaggagcttcttctaaggacgtacccgggaaataccgggttcgatttccaggaggaacaacgcttagctagtgtgca 5069876  T
Q  838 tgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 899  Q
    ||| | ||||||| |||||||||||||||  | |||||||| |||| |||||| || |||||    
T  5069875 tgcctctacgcacaagccggattagtcgcccacctttggtgggtcggaaaccgatgcgaaag 5069814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 736 - 899
Target Start/End: Complemental strand, 22993530 - 22993366
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 834  Q
    |||||||||| |||  |||||||||||| || |||||||||| ||||||  |||| |||   | |||||||| | ||||| ||||||| ||||||| ||     
T  22993530 aaccaagttgcttggactccagtggcaaggagctccttccaaggacgtacccggggaatatcgggttcgattccgaggaggaacaacgcttggccagtgt 22993431  T
Q  835 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 899  Q
    |||||| | ||||||||| |||||||||||||  | |||||||| |||  ||||||||| |||||    
T  22993430 gcatgcctctacgcacgaaccggattagtcgctcacctttggtgggtcagaaaccggtgcgaaag 22993366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 736 - 866
Target Start/End: Complemental strand, 4228914 - 4228786
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcg 835  Q
    |||||||||| ||| ||||||| ||||| || |||||||||| ||||||| || | ||| |   |||||||||||||||  |||||||||||||| |||     
T  4228914 aaccaagttgtttgggctccagcggcaaggagctccttccaaggacgtatccgaggaataccaggttcgatttccagga--acaacgtttggccagtgca 4228817  T
Q  836 catgcatttacgcacgagccggattagtcgc 866  Q
    |||||   |||||| ||||||||||||||||    
T  4228816 catgcccctacgcatgagccggattagtcgc 4228786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 736 - 893
Target Start/End: Original strand, 13095804 - 13095962
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 834  Q
    |||||||||| ||| ||||| ||||||| || |||||| ||| ||||||  |||| ||| | | |||| ||| ||||| | ||||||  ||||||| |||    
T  13095804 aaccaagttgcttgggctcccgtggcaaggagctcctttcaaggacgtacccggggaataccgggttctattcccagggggaacaacacttggccagtgc 13095903  T
Q  835 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtg 893  Q
    |||||| | |||||| ||||||||||||||||  | |||||||| |||| |||||||||    
T  13095904 gcatgcctctacgcatgagccggattagtcgctcacctttggtgggtcggaaaccggtg 13095962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 815 - 901
Target Start/End: Complemental strand, 38578950 - 38578864
Alignment:
Q  815 gaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaagaa 901  Q
    |||||||| ||||||| ||||||||| | |||||| ||||||||||||||||  | |||||||| |||| ||||||||| |||||||    
T  38578950 gaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgcccacctttggtgggtcggaaaccggtgcgaaagaa 38578864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 736 - 865
Target Start/End: Original strand, 47341822 - 47341952
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 834  Q
    |||||||||| ||| ||||||||||||| || ||| |||||| ||||||  |||| ||| | |||||||||| ||| || |||||||  ||||||| |||    
T  47341822 aaccaagttgcttgggctccagtggcaaggagctcattccaaggacgtacccggggaataccgagttcgattcccagggggaacaacacttggccagtgc 47341921  T
Q  835 gcatgcatttacgcacgagccggattagtcg 865  Q
    |||||| | ||||||||||| ||||| ||||    
T  47341922 gcatgcctctacgcacgagcaggattggtcg 47341952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 736 - 901
Target Start/End: Original strand, 22573759 - 22573924
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcg 835  Q
    |||||||||| ||| |||||||| ||||  | || ||||||||||  |||| ||| |||   | ||||||||| |||| ||||||| |||| ||| ||||    
T  22573759 aaccaagttgcttgggctccagtagcaagaagcttcttccaaagatatattgggggaatatcgggttcgattttcaggggaacaacatttgaccagtgcg 22573858  T
Q  836 catgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaagaa 901  Q
    ||||| |||||||| ||||||||||| |||   ||| ||| || || ||||||||||| |||||||    
T  22573859 catgcctttacgcatgagccggattaatcgtccatcattgatgggttgaaaaccggtgcgaaagaa 22573924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 736 - 899
Target Start/End: Complemental strand, 10048039 - 10047875
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 834  Q
    |||||||||| |||| |||||||||||| || |||||||||| ||||||| |||| ||| | | |||||||| ||| || |||||||  ||||||| |||    
T  10048039 aaccaagttgcttgaactccagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgattcccagggggaacaacacttggccagtgc 10047940  T
Q  835 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 899  Q
    ||| || | |||||| |||| | ||||||||   | | |||||| |||| ||||||||| |||||    
T  10047939 gcaggcctctacgcatgagcagaattagtcgtccaccattggtgggtcggaaaccggtgcgaaag 10047875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 752 - 861
Target Start/End: Complemental strand, 42210409 - 42210299
Alignment:
Q  752 ctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccag-gagaacaacgtttggccattgcgcatgcatttacgcac 850  Q
    |||||||||||| || ||| |||||| ||||||| || | ||| | |  ||||||| |||| || ||||||||||||||| ||||||||| | |||||||    
T  42210409 ctccagtggcaaggagctctttccaaggacgtatccgaggaataccggcttcgattcccagtgaaaacaacgtttggccagtgcgcatgcctctacgcac 42210310  T
Q  851 gagccggatta 861  Q
    |||||||||||    
T  42210309 gagccggatta 42210299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 736 - 863
Target Start/End: Original strand, 43925458 - 43925586
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 834  Q
    |||||||||| ||| ||||||||||||| || |||||||||| ||||||  |||| ||| | | |||||||| ||| || |||||||  |||| || |||    
T  43925458 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattcccagggggaacaacacttggtcagtgc 43925557  T
Q  835 gcatgcatttacgcacgagccggattagt 863  Q
    |||||| | |||||| |||| ||||||||    
T  43925558 gcatgcctctacgcatgagctggattagt 43925586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 739 - 790
Target Start/End: Original strand, 11607080 - 11607131
Alignment:
Q  739 caagttgattgagctccagtggcaatgaactccttccaaagacgtattcggg 790  Q
    ||||||| ||| ||||||||||||| ||||||||||||| ||||||||||||    
T  11607080 caagttgcttgggctccagtggcaaggaactccttccaaggacgtattcggg 11607131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 800 - 902
Target Start/End: Original strand, 27028289 - 27028392
Alignment:
Q  800 gttcgatttccaggag-aacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaa 898  Q
    |||||||||||||| | ||||||  ||||||| ||||||||| | ||| || |||| |||||||||||  | |||||||| |||| ||||||||| ||||    
T  27028289 gttcgatttccagggggaacaacacttggccagtgcgcatgcctctacacatgagctggattagtcgctcacctttggtgggtcggaaaccggtgcgaaa 27028388  T
Q  899 gaag 902  Q
    ||||    
T  27028389 gaag 27028392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 755 - 832
Target Start/End: Complemental strand, 45853664 - 45853586
Alignment:
Q  755 cagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccag-gagaacaacgtttggccatt 832  Q
    ||||||||| ||||||||||||| |||||||| ||  ||||| ||||||||||||||| |  ||||||| |||||||||    
T  45853664 cagtggcaaggaactccttccaaggacgtatttggagaatgccgagttcgatttccagtggaaacaacgattggccatt 45853586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 816 - 865
Target Start/End: Original strand, 3353451 - 3353500
Alignment:
Q  816 aacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcg 865  Q
    |||||| |||||||| ||||||||| | ||||||||||||||||||||||    
T  3353451 aacaacatttggccagtgcgcatgcctctacgcacgagccggattagtcg 3353500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 736 - 892
Target Start/End: Original strand, 21530694 - 21530851
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 834  Q
    |||||||||| ||  ||||||||||||| || |||||||||| ||||||   ||| ||| ||| ||| |||| ||| || |||||||  |||| || |||    
T  21530694 aaccaagttgcttcggctccagtggcaaggagctccttccaaggacgtacctggggaatactgggtttgattcccagggggaacaacacttggtcagtgc 21530793  T
Q  835 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggt 892  Q
     ||||| | ||||||||||||| |||| ||||  | |||||||| |||| ||||||||    
T  21530794 acatgcctctacgcacgagccgaattaatcgctcacctttggtgggtcggaaaccggt 21530851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 815 - 899
Target Start/End: Complemental strand, 4706067 - 4705983
Alignment:
Q  815 gaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 899  Q
    ||||||||||| |||||| ||||||| | ||||||||||| ||||||||||   | |||||||   |||||||||| ||||||||    
T  4706067 gaacaacgtttagccattacgcatgcttctacgcacgagctggattagtcgtccacctttggtagatcgaaaaccgatgtgaaag 4705983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 751 - 866
Target Start/End: Original strand, 14535252 - 14535368
Alignment:
Q  751 gctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgcgcatgcatttacgca 849  Q
    |||||| |||||| ||||||||||||| |||||| || || ||| | | |||  |||| || ||||||||||  ||||||| || |||||| | ||||||    
T  14535252 gctccaatggcaaagaactccttccaaggacgtactccgggaataccgggtttcattttcagggagaacaacacttggccagtgtgcatgcctctacgca 14535351  T
Q  850 cgagccggattagtcgc 866  Q
    ||||| |||||||||||    
T  14535352 cgagctggattagtcgc 14535368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 768 - 899
Target Start/End: Complemental strand, 21190911 - 21190779
Alignment:
Q  768 ctccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaa-caacgtttggccattgcgcatgcatttacgcacgagccggattagtcgc 866  Q
    |||||||||| ||| ||| |||| ||| | | |||||||| | ||||| | ||||| ||||| | ||||||||| | |||||||||| | ||||||||||    
T  21190911 ctccttccaaggacttatccggggaataccgggttcgattcctaggaggagcaacgcttggctagtgcgcatgcctctacgcacgagtcagattagtcgc 21190812  T
Q  867 atatctttggtgtgtcgaaaaccggtgtgaaag 899  Q
      |||  ||||| |||||||||||||| |||||    
T  21190811 ccatcaatggtgggtcgaaaaccggtgcgaaag 21190779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 736 - 839
Target Start/End: Complemental strand, 22268192 - 22268088
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 834  Q
    |||||||||| ||| ||||||||||||| || ||| |||||| |||||| | ||| ||| | | |||||||| ||| || ||||||| |||||||| |||    
T  22268192 aaccaagttgtttgggctccagtggcaaggagctcattccaaggacgtacttggggaataccgggttcgattcccagggggaacaacatttggccagtgc 22268093  T
Q  835 gcatg 839  Q
    |||||    
T  22268092 gcatg 22268088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 799 - 878
Target Start/End: Original strand, 23658188 - 23658268
Alignment:
Q  799 agttcgatttccaggag-aacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtg 878  Q
    ||||||||||||||| | ||||||| ||||||| || |||||| | ||| ||||||||||||||||||   ||||||||||    
T  23658188 agttcgatttccagggggaacaacgcttggccagtgtgcatgcctctacacacgagccggattagtcgtccatctttggtg 23658268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 832 - 892
Target Start/End: Complemental strand, 28396226 - 28396166
Alignment:
Q  832 tgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggt 892  Q
    ||||||||| |||||||| |||||||||||||||  || |||||||| |||| ||||||||    
T  28396226 tgcgcatgcctttacgcatgagccggattagtcgtctacctttggtgggtcggaaaccggt 28396166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 756 - 899
Target Start/End: Complemental strand, 36619397 - 36619253
Alignment:
Q  756 agtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgcgcatgcatttacgcacgagc 854  Q
    |||||||| ||||||||| ||| |||||||| ||| ||| | | |||||||| ||||| | ||||||  ||| ||| || |||||| | |||||| ||||    
T  36619397 agtggcaaggaactccttgcaaggacgtatttggggaataccgggttcgattcccagggggaacaacacttgtccagtgtgcatgcctctacgcatgagc 36619298  T
Q  855 cggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 899  Q
    |||||||||||   | | |||||| ||| |||||| |||||||||    
T  36619297 cggattagtcgtccaccattggtgggtcaaaaaccagtgtgaaag 36619253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 768 - 899
Target Start/End: Original strand, 37514899 - 37515031
Alignment:
Q  768 ctccttccaaagacgtattcgggaaatgctgagttcgatttccag-gagaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgc 866  Q
    |||||||||| ||| ||  |||| ||| ||| ||||||||| ||| | ||||||||||||| || ||||||||  | |||||||||||||||||| |||     
T  37514899 ctccttccaaggacatacccggggaatactgggttcgattttcagtgggaacaacgtttggtcagtgcgcatgtctctacgcacgagccggattaatcgt 37514998  T
Q  867 atatctttggtgtgtcgaaaaccggtgtgaaag 899  Q
      | | || ||| |||| |||||||||||||||    
T  37514999 tcaccattagtgggtcggaaaccggtgtgaaag 37515031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 819 - 899
Target Start/End: Original strand, 41945503 - 41945583
Alignment:
Q  819 aacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 899  Q
    |||| ||||||| ||||||||| | ||||||||||||||||||||||   | |||||||| |||| ||| ||||| |||||    
T  41945503 aacgcttggccagtgcgcatgcctctacgcacgagccggattagtcgtccacctttggtgagtcggaaatcggtgcgaaag 41945583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 736 - 866
Target Start/End: Complemental strand, 45960165 - 45960035
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcc-aggagaacaacgtttggccattgc 834  Q
    |||||||||| |||||||||||| |||| || ||| |||||| |||||| ||||| ||| | ||||| |||| || |||  ||||||  |||| || |||    
T  45960165 aaccaagttgtttgagctccagtagcaaggagctctttccaaggacgta-tcggggaataccgagtttgattcccaagggcaacaacacttggtcagtgc 45960067  T
Q  835 gcatgcatttacgcacgagccggattagtcgc 866  Q
    |||||| | ||||||  |||||||||||||||    
T  45960066 gcatgcctctacgcataagccggattagtcgc 45960035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 800 - 865
Target Start/End: Original strand, 30827302 - 30827368
Alignment:
Q  800 gttcgatttccagg-agaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcg 865  Q
    ||||||||| |||| ||||||||  ||||||| | ||||||| | ||||||||||||||||||||||    
T  30827302 gttcgattttcagggagaacaacacttggccagtacgcatgcctctacgcacgagccggattagtcg 30827368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 845 - 899
Target Start/End: Complemental strand, 34127698 - 34127644
Alignment:
Q  845 acgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 899  Q
    ||||||||||||||||||||||  | |||||||| ||| |||||||||| |||||    
T  34127698 acgcacgagccggattagtcgcccacctttggtgggtcaaaaaccggtgcgaaag 34127644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 464 - 529
Target Start/End: Complemental strand, 11680653 - 11680588
Alignment:
Q  464 tatagttgaaaacagagtaaggaatgcatctaaaaatttgtaggcggttttatatttaaggacaaa 529  Q
    |||||||||||| | ||||| ||||||||||| |||||||||   | | |||||||||||||||||    
T  11680653 tatagttgaaaaaaaagtaaagaatgcatctagaaatttgtaaatgatcttatatttaaggacaaa 11680588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 735 - 863
Target Start/End: Original strand, 42032041 - 42032170
Alignment:
Q  735 gaaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattg 833  Q
    |||| |||||| ||| |||||||| ||||  | |||||||||| ||||||  |||| ||| |   |||||||| ||| || |||||||||||||||| ||    
T  42032041 gaactaagttgtttgggctccagtagcaagaagctccttccaaggacgtacccggggaatacctggttcgattcccacggggaacaacgtttggccagtg 42032140  T
Q  834 cgcatgcatttacgcacgagccggattagt 863  Q
    | ||| ||| |||||| |||||| ||||||    
T  42032141 cacatacatctacgcatgagccgaattagt 42032170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 57; Significance: 3e-23; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 736 - 899
Target Start/End: Original strand, 13893869 - 13894033
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 834  Q
    |||||||||| ||| ||||||||||||| || |||||||||| ||||| | |||| ||| | | ||| |||||||||| | ||||||| |||| || |||    
T  13893869 aaccaagttgtttgggctccagtggcaaggagctccttccaaggacgtgtccggggaataccgggttggatttccagggggaacaacgcttggtcaatgc 13893968  T
Q  835 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 899  Q
    |||||| | ||| |||||||||||||||||||  | ||||||||  ||||||||||||| |||||    
T  13893969 gcatgcctctacacacgagccggattagtcgcccacctttggtggatcgaaaaccggtgcgaaag 13894033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 8e-21
Query Start/End: Original strand, 736 - 899
Target Start/End: Original strand, 7328787 - 7328950
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 834  Q
    |||||||||| ||| |||| |||||||| ||  ||||||||| ||||||  |||||||| | | |||||||| ||||| | ||||||  ||||||| |||    
T  7328787 aaccaagttgcttgtgctctagtggcaaggagttccttccaaggacgtacccgggaaataccgggttcgattcccagggggaacaacacttggccagtgc 7328886  T
Q  835 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 899  Q
    |||||| || ||||| ||||||||||||||||  | |||||||| |||||||||||||| |||||    
T  7328887 gcatgcctt-acgcatgagccggattagtcgcccacctttggtgggtcgaaaaccggtgcgaaag 7328950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 53; E-Value: 8e-21
Query Start/End: Original strand, 736 - 899
Target Start/End: Original strand, 15320129 - 15320293
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 834  Q
    |||||||||| |||  |||||||||||| || |||||||||| ||||||  |||| ||| | | |||||||||| ||||| ||||| | ||||||| ||     
T  15320129 aaccaagttgtttggactccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgatttcgaggaggaacaatgattggccagtgt 15320228  T
Q  835 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 899  Q
    |||||| | |||||||||||||||||||||||  | |||||||| |||  ||||||||| |||||    
T  15320229 gcatgcctctacgcacgagccggattagtcgcccacctttggtgggtcagaaaccggtgcgaaag 15320293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 736 - 865
Target Start/End: Original strand, 33251605 - 33251735
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccag-gagaacaacgtttggccattgc 834  Q
    |||||||||| ||| ||||| |||||||||| |||||||||| |||||||| ||| ||| | | |||||||| || | | |||||||||||||||| ||     
T  33251605 aaccaagttgtttgggctccggtggcaatgagctccttccaaggacgtattaggggaataccgggttcgattcccggtgggaacaacgtttggccagtgt 33251704  T
Q  835 gcatgcatttacgcacgagccggattagtcg 865  Q
    |||||| | |||||| |||||||||||||||    
T  33251705 gcatgcctctacgcatgagccggattagtcg 33251735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 736 - 899
Target Start/End: Original strand, 29127862 - 29128026
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccagg-agaacaacgtttggccattgc 834  Q
    |||||||||| ||| ||||||||||||| ||  ||||||||| |||||||  ||| |||   | |||||||||||||| ||||||||  |||| || |||    
T  29127862 aaccaagttgtttgggctccagtggcaaggagatccttccaaggacgtatctggggaatatcgggttcgatttccagggagaacaacacttggtcagtgc 29127961  T
Q  835 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 899  Q
    |||||| | |||||| ||||||||||||||||  | |||||||| |||| |||||| || |||||    
T  29127962 gcatgcctctacgcatgagccggattagtcgcccacctttggtgggtcggaaaccgatgcgaaag 29128026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 736 - 899
Target Start/End: Original strand, 54261169 - 54261333
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 834  Q
    |||||||||| ||| ||||||||||||| || |||||||||| ||||||   ||| ||| | | |||||||| | ||||| ||||||| ||||||| |||    
T  54261169 aaccaagttgtttgggctccagtggcaaggagctccttccaaggacgtacctggggaataccgggttcgattcctaggaggaacaacgcttggccagtgc 54261268  T
Q  835 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 899  Q
    |||||| | |||||| |||||||||||||||   | |||| ||| |||| ||||||||| |||||    
T  54261269 gcatgcctctacgcatgagccggattagtcgttcacctttagtgggtcggaaaccggtgcgaaag 54261333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 736 - 865
Target Start/End: Original strand, 45877397 - 45877527
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 834  Q
    |||||||||| ||| ||||||||||||| || | |||||||| ||||||| |||| ||| | | |||||||||||||| | ||||||  ||||||| |||    
T  45877397 aaccaagttgtttgggctccagtggcaaggagccccttccaaggacgtatccggggaataccgggttcgatttccaggggaaacaacacttggccagtgc 45877496  T
Q  835 gcatgcatttacgcacgagccggattagtcg 865  Q
     ||||| | |||||| |||||||||||||||    
T  45877497 acatgcctctacgcatgagccggattagtcg 45877527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 736 - 893
Target Start/End: Complemental strand, 55069843 - 55069685
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccag-gagaacaacgtttggccattgc 834  Q
    |||||||||| ||| ||||||||| |||||| ||| || ||| ||||||||| || ||| ||| ||| |||| | |  | |||||||||||||||| |||    
T  55069843 aaccaagttgtttgggctccagtgacaatgagctcttttcaaggacgtattcagggaatactgggtttgattcctatagggaacaacgtttggccagtgc 55069744  T
Q  835 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtg 893  Q
     ||||| | |||||||||||||||||| ||||  | |||||||| |||| |||||||||    
T  55069743 acatgcctctacgcacgagccggattaatcgctcacctttggtgggtcggaaaccggtg 55069685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 815 - 899
Target Start/End: Complemental strand, 26362051 - 26361967
Alignment:
Q  815 gaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 899  Q
    ||||||||||||| || || |||||| | |||||||||||||||||||||||| | ||||| || |||| |||||||||||||||    
T  26362051 gaacaacgtttggtcagtgtgcatgcctctacgcacgagccggattagtcgcacacctttgatgggtcggaaaccggtgtgaaag 26361967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 740 - 899
Target Start/End: Complemental strand, 28572371 - 28572211
Alignment:
Q  740 aagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaa-caacgtttggccattgcgcat 838  Q
    |||||| ||| ||||||||||||| || |||||| |||  ||| |  |||| ||| ||| |||||||| ||||| ||| ||||| ||||||| |  ||||    
T  28572371 aagttgcttgtgctccagtggcaaggagctcctttcaagaacgcacccggggaatactgggttcgattcccaggggaaacaacgcttggccagtatgcat 28572272  T
Q  839 gcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 899  Q
    || | |||||||||||||||||||||||  | |||||||| |||| ||||||||| |||||    
T  28572271 gcctctacgcacgagccggattagtcgcccacctttggtgggtcggaaaccggtgcgaaag 28572211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 739 - 865
Target Start/End: Original strand, 6462358 - 6462485
Alignment:
Q  739 caagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccagg-agaacaacgtttggccattgcgca 837  Q
    ||||||| ||| |||| |||||||| || |||||||||| |||||||  ||| ||| | | ||||||||  |||| ||||||||| ||||||| ||||||    
T  6462358 caagttgcttgggctctagtggcaaggagctccttccaaggacgtatctggggaataccgggttcgattcacagggagaacaacgcttggccagtgcgca 6462457  T
Q  838 tgcatttacgcacgagccggattagtcg 865  Q
    ||| | |||||| |||||||||||||||    
T  6462458 tgcctctacgcatgagccggattagtcg 6462485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 736 - 866
Target Start/End: Original strand, 10855327 - 10855458
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 834  Q
    |||||||||| ||| ||||||||||||| || |||||||||| || ||| | ||||||| | | ||| |||||||| || |||||||| ||||||| | |    
T  10855327 aaccaagttgtttgggctccagtggcaaggagctccttccaaggatgtacttgggaaataccgggtttgatttccagggggaacaacgcttggccagtac 10855426  T
Q  835 gcatgcatttacgcacgagccggattagtcgc 866  Q
    |||||| | ||||||||| ||| |||||||||    
T  10855427 gcatgcctctacgcacgaaccgaattagtcgc 10855458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 758 - 893
Target Start/End: Complemental strand, 15795635 - 15795500
Alignment:
Q  758 tggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcgcatgcatttacgcacgagccgg 857  Q
    |||| |||| |||||||||| ||||||  |||| ||| | |||||||||| ||||| |||||||| |||| || ||||||||| | ||||||||||| |     
T  15795635 tggcgatgagctccttccaaggacgtacccggggaataccgagttcgattcccaggggaacaacgcttggtcagtgcgcatgcctctacgcacgagctga 15795536  T
Q  858 attagtcgcatatctttggtgtgtcgaaaaccggtg 893  Q
    |||||||||  | |  ||||| ||||||||||||||    
T  15795535 attagtcgcccaccaatggtgggtcgaaaaccggtg 15795500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 736 - 899
Target Start/End: Complemental strand, 47749268 - 47749105
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcg 835  Q
    |||||| ||| ||| |||||||||| ||||| || ||||||| ||||||| | || ||| | | |||||||| | ||| |||||||  ||||||| ||||    
T  47749268 aaccaaattgtttgggctccagtggtaatgagcttcttccaaggacgtatccagggaataccgggttcgattcctaggggaacaactcttggccagtgcg 47749169  T
Q  836 catgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 899  Q
    ||||| | ||||||||||||| |||||||||  | |||||||  |||| |||||| || |||||    
T  47749168 catgcctctacgcacgagccgaattagtcgcccacctttggtaggtcggaaaccgatgcgaaag 47749105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 736 - 866
Target Start/End: Complemental strand, 51683118 - 51682987
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 834  Q
    |||||||||| ||| ||||||||||| | || |||||||||||||||||| |||| ||| |   |||||||| ||| || |||||||| ||| ||| |||    
T  51683118 aaccaagttgtttgggctccagtggcgaggagctccttccaaagacgtatccggggaataccaggttcgattcccagggggaacaacgcttgaccagtgc 51683019  T
Q  835 gcatgcatttacgcacgagccggattagtcgc 866  Q
    |||||| | | | |||||||||||||||||||    
T  51683018 gcatgcctctccacacgagccggattagtcgc 51682987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 736 - 865
Target Start/End: Original strand, 3755513 - 3755643
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 834  Q
    |||||||||| |||  |||||||||||| || ||| || ||| ||||||| |||| ||| | || ||||||| ||||||| ||||||||||| ||| |||    
T  3755513 aaccaagttgcttggactccagtggcaaagagctcttttcaaggacgtatccggggaataccgacttcgattcccaggaggaacaacgtttgaccagtgc 3755612  T
Q  835 gcatgcatttacgcacgagccggattagtcg 865  Q
    |||||  | |||||| |||||||||||||||    
T  3755613 gcatgtctctacgcatgagccggattagtcg 3755643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 736 - 858
Target Start/End: Original strand, 10040500 - 10040622
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcg 835  Q
    |||||||||| ||| ||||||||||||| || ||||||| || ||||||  |||| |||   | ||||||||  |||| |||||||| ||||||| ||||    
T  10040500 aaccaagttgcttgggctccagtggcaaggagctccttctaaggacgtacccggggaatatcgggttcgattctcaggggaacaacgcttggccagtgcg 10040599  T
Q  836 catgcatttacgcacgagccgga 858  Q
    ||||| | |||||||||||||||    
T  10040600 catgcctctacgcacgagccgga 10040622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 736 - 866
Target Start/End: Original strand, 39849015 - 39849145
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcg 835  Q
    |||||||| | ||| ||||||||||||| || |||||||||| |||||| || || |||   | |||||||| ||||  |||||||| ||||||| || |    
T  39849015 aaccaagtcgcttgggctccagtggcaaggagctccttccaaggacgtactcagggaatttcgggttcgattcccagaggaacaacgcttggccagtgtg 39849114  T
Q  836 catgcatttacgcacgagccggattagtcgc 866  Q
    ||||| | |||||| ||||||||||||||||    
T  39849115 catgcctctacgcatgagccggattagtcgc 39849145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 736 - 899
Target Start/End: Complemental strand, 7310867 - 7310703
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccag-gagaacaacgtttggccattgc 834  Q
    |||||||||||||| ||||| |||||||||| ||||||||||  |||||   | | ||| | | |||||||| |||| | |||||||  ||| ||  ||     
T  7310867 aaccaagttgattgggctccggtggcaatgagctccttccaagaacgtacctgaggaataccgggttcgattcccagtgggaacaacacttgcccggtgt 7310768  T
Q  835 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 899  Q
    |||||| | |||||||||||||||||||||||  |||||||||| |||| |||||| || |||||    
T  7310767 gcatgcctctacgcacgagccggattagtcgctcatctttggtgggtcggaaaccgatgcgaaag 7310703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 815 - 898
Target Start/End: Complemental strand, 3507617 - 3507534
Alignment:
Q  815 gaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaa 898  Q
    |||||||  ||||||| ||||||||| | |||||||||||||||||||||||  | |||||||| |||| ||||||||| ||||    
T  3507617 gaacaacacttggccagtgcgcatgcctctacgcacgagccggattagtcgctcacctttggtgggtcggaaaccggtgcgaaa 3507534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 736 - 866
Target Start/End: Complemental strand, 42412938 - 42412807
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 834  Q
    |||||||||| ||| |||||| |||||| || |||||||||| ||||||| |||| ||| | | |||||||| || || | ||||||| ||||| | |||    
T  42412938 aaccaagttgcttgggctccaatggcaaggagctccttccaaggacgtatccggggaataccgggttcgattcccggggggaacaacgcttggcaagtgc 42412839  T
Q  835 gcatgcatttacgcacgagccggattagtcgc 866  Q
     ||||| | |||||| ||||||||||||||||    
T  42412838 ccatgcctctacgcatgagccggattagtcgc 42412807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 736 - 865
Target Start/End: Complemental strand, 26207965 - 26207835
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 834  Q
    |||||||||| ||| ||||||||||||| || |||||||||| || |||  |||| ||| | | |||||||| ||| || |||||||| ||| ||| ||     
T  26207965 aaccaagttgcttgggctccagtggcaaggagctccttccaaggatgtacccggggaataccgggttcgattcccacggggaacaacgcttgtccagtgt 26207866  T
Q  835 gcatgcatttacgcacgagccggattagtcg 865  Q
    |||||| | |||||| |||||||||||||||    
T  26207865 gcatgcctctacgcatgagccggattagtcg 26207835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 736 - 864
Target Start/End: Original strand, 29135856 - 29135985
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 834  Q
    |||||| ||| ||| ||||||||||||| || || ||||||| ||||||| |||| ||| | |  ||||||| ||||| | ||||||  ||||||| |||    
T  29135856 aaccaaattgcttgggctccagtggcaaggagcttcttccaaggacgtatccggggaataccggattcgattcccagggggaacaacacttggccagtgc 29135955  T
Q  835 gcatgcatttacgcacgagccggattagtc 864  Q
    |||||| | |||||| ||||||||||||||    
T  29135956 gcatgcctctacgcatgagccggattagtc 29135985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 815 - 899
Target Start/End: Original strand, 8164576 - 8164660
Alignment:
Q  815 gaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 899  Q
    |||||||| ||||||| ||||||||| |||||||||||| ||||||||||||  | ||||||||  ||| ||| ||| |||||||    
T  8164576 gaacaacgcttggccagtgcgcatgcctttacgcacgagtcggattagtcgcccacctttggtggatcggaaatcggcgtgaaag 8164660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 736 - 867
Target Start/End: Original strand, 28242221 - 28242353
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 834  Q
    |||||||||| ||||||||| |||| || || |||||||||| ||||||| |||  ||| | | ||| |||| ||||||| ||||| ||||||||| |||    
T  28242221 aaccaagttgcttgagctccggtggtaaagagctccttccaatgacgtatccggagaataccgggttagattgccaggaggaacaatgtttggccagtgc 28242320  T
Q  835 gcatgcatttacgcacgagccggattagtcgca 867  Q
     ||||| | || ||| ||| |||||||||||||    
T  28242321 acatgcctctatgcatgaggcggattagtcgca 28242353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 736 - 899
Target Start/End: Complemental strand, 41630676 - 41630512
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 834  Q
    |||||||||| ||| ||||||||| ||| || |||||||||  ||||||  ||| |||| | | |||| ||| ||| || |||||||| ||| ||| |||    
T  41630676 aaccaagttgtttgggctccagtgacaaggagctccttccatggacgtaaccggaaaataccgggttcaattcccaaggggaacaacgcttgcccagtgc 41630577  T
Q  835 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 899  Q
    |||||| | ||| || ||||||||||||||||  | |||||||  |||| |||| ||||||||||    
T  41630576 gcatgcctctacacatgagccggattagtcgcccacctttggttggtcggaaactggtgtgaaag 41630512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 741 - 852
Target Start/End: Original strand, 49082772 - 49082884
Alignment:
Q  741 agttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgcgcatg 839  Q
    ||||| ||| ||||||||||||  || ||||||| || ||||||| |||| ||| | |||||||||| ||| ||||||||||| || |||| ||||||||    
T  49082772 agttgtttgggctccagtggcagggagctccttctaaggacgtatccggggaataccgagttcgattcccagggagaacaacgcttagccagtgcgcatg 49082871  T
Q  840 catttacgcacga 852  Q
    ||| ||| |||||    
T  49082872 catctacacacga 49082884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 736 - 902
Target Start/End: Complemental strand, 29762319 - 29762152
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 834  Q
    |||||||||| ||| ||||||||||||| || |||||||||| || ||||||||| |||   | || |||||  |||| | ||||||  ||||||| |||    
T  29762319 aaccaagttgcttgggctccagtggcaaggagctccttccaaggatgtattcggggaatatcgggtccgattctcaggggcaacaacacttggccagtgc 29762220  T
Q  835 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaagaag 902  Q
    |||||| | || ||| |||| ||||||||||   | | |||||| |||| ||||||||| ||||||||    
T  29762219 gcatgcctctatgcatgagctggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagaag 29762152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 844 - 899
Target Start/End: Original strand, 47164158 - 47164213
Alignment:
Q  844 tacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 899  Q
    |||||||||||||||||||||||  ||||||||||  ||| |||||||||||||||    
T  47164158 tacgcacgagccggattagtcgctcatctttggtggatcggaaaccggtgtgaaag 47164213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 736 - 865
Target Start/End: Original strand, 25294903 - 25295033
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatt-tccaggagaacaacgtttggccattgc 834  Q
    |||||||||| ||| ||||||||||||| || |||||||||| ||||||| |||| ||| | | ||| |||| ||  ||  ||||||  ||||||| |||    
T  25294903 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtatccggggaataccgggtttgattctctggggaaacaacacttggccagtgc 25295002  T
Q  835 gcatgcatttacgcacgagccggattagtcg 865  Q
    |||||| | || ||| |||||||||||||||    
T  25295003 gcatgcctctatgcatgagccggattagtcg 25295033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 736 - 837
Target Start/End: Original strand, 50682420 - 50682522
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 834  Q
    |||||||||| |||||||| ||||||||  | ||||||| || ||||||||||| ||||   | |||||||||| | ||||||||||| ||||||| |||    
T  50682420 aaccaagttgtttgagctctagtggcaagaagctccttcgaatgacgtattcggaaaatatagggttcgatttctagggagaacaacgcttggccagtgc 50682519  T
Q  835 gca 837  Q
    |||    
T  50682520 gca 50682522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 800 - 888
Target Start/End: Complemental strand, 30767347 - 30767258
Alignment:
Q  800 gttcgatttccaggag-aacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaac 888  Q
    |||||||||||||| | ||||||  ||||||| || |||||| | |||||||||||||||||||||||  | |||||||| |||| ||||    
T  30767347 gttcgatttccagggggaacaacacttggccagtgtgcatgcctctacgcacgagccggattagtcgcccacctttggtgggtcggaaac 30767258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 737 - 861
Target Start/End: Original strand, 41219537 - 41219661
Alignment:
Q  737 accaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgcg 835  Q
    ||||||||| ||| ||||| || ||||||| ||||||| || ||||||| |||||| | |  |||||||||  |||||| ||||||||||||||| ||||    
T  41219537 accaagttgcttgggctcccgttgcaatgagctccttctaaggacgtatacgggaa-taccaagttcgattctcaggaggaacaacgtttggccagtgcg 41219635  T
Q  836 catgcatttacgcacgagccggatta 861  Q
     |||| | | ||||||||| ||||||    
T  41219636 tatgcctctgcgcacgagctggatta 41219661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 800 - 891
Target Start/End: Original strand, 26043819 - 26043911
Alignment:
Q  800 gttcgatttccagg-agaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccgg 891  Q
    |||||||| ||||| ||||||||  ||||||| ||||||||| | |||||| ||||||||||||||||  | |||||||| |||  |||||||    
T  26043819 gttcgattcccagggagaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtcgctcacctttggtgagtcagaaaccgg 26043911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 832 - 892
Target Start/End: Complemental strand, 43330799 - 43330739
Alignment:
Q  832 tgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggt 892  Q
    ||||||||| | |||||||||||||||||||||||  | |||||||| ||| |||||||||    
T  43330799 tgcgcatgcctctacgcacgagccggattagtcgcccacctttggtgggtcaaaaaccggt 43330739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 815 - 866
Target Start/End: Original strand, 7648763 - 7648814
Alignment:
Q  815 gaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgc 866  Q
    |||||||||||| ||| ||||||| | | |||||||||||||||||||||||    
T  7648763 gaacaacgtttgaccagtgcgcatacctctacgcacgagccggattagtcgc 7648814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 844 - 899
Target Start/End: Complemental strand, 36043729 - 36043674
Alignment:
Q  844 tacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 899  Q
    |||||||||||||||||||||||  | |||||||| |||| ||||||||| |||||    
T  36043729 tacgcacgagccggattagtcgcccacctttggtgggtcggaaaccggtgcgaaag 36043674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 740 - 889
Target Start/End: Complemental strand, 22405703 - 22405553
Alignment:
Q  740 aagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgcgcat 838  Q
    |||||| ||| ||||||||||||| || ||||| |||| ||||||| || ||||| | |  ||| |||  |||||| ||||||| ||  ||| |||| ||    
T  22405703 aagttgtttgggctccagtggcaaggagctcctaccaatgacgtatccgtgaaataccggattctattctcaggaggaacaacgcttaaccaatgcgaat 22405604  T
Q  839 gcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaacc 889  Q
    || |||| ||||||||||||||| |||   |||||||||| |||| |||||    
T  22405603 gcctttatgcacgagccggattaatcgtccatctttggtgcgtcggaaacc 22405553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 812 - 862
Target Start/End: Complemental strand, 34460597 - 34460547
Alignment:
Q  812 ggagaacaacgtttggccattgcgcatgcatttacgcacgagccggattag 862  Q
    ||||||||||||||||||| || |||||| |  ||||||||||||||||||    
T  34460597 ggagaacaacgtttggccagtgtgcatgcctccacgcacgagccggattag 34460547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 815 - 893
Target Start/End: Complemental strand, 35923707 - 35923629
Alignment:
Q  815 gaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtg 893  Q
    |||||||||||||||| ||||||||| | || ||||||| || ||||||||   ||||||| ||  |||||||||||||    
T  35923707 gaacaacgtttggccagtgcgcatgcctctaagcacgagtcgaattagtcgtccatctttgatggatcgaaaaccggtg 35923629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 736 - 865
Target Start/End: Original strand, 49198294 - 49198424
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 834  Q
    |||||||||| ||| ||||||||| ||| ||  | ||||||| ||| ||| |||| ||| | | |||||||| | ||| | ||||||  ||||||| |||    
T  49198294 aaccaagttgtttgggctccagtgacaaggagtttcttccaaggacatatccggggaataccgggttcgattcctagggggaacaacacttggccagtgc 49198393  T
Q  835 gcatgcatttacgcacgagccggattagtcg 865  Q
    |||||| | |||||| |||||||||||||||    
T  49198394 gcatgcctctacgcatgagccggattagtcg 49198424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 768 - 861
Target Start/End: Complemental strand, 52364932 - 52364838
Alignment:
Q  768 ctccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgcgcatgcatttacgcacgagccggatta 861  Q
    |||||||||| ||||||  |||| ||| | |||||||||| |||| || ||||||| ||| ||| ||||||||| | ||||||||||| ||||||    
T  52364932 ctccttccaaggacgtacccggggaataccgagttcgattcccagaaggaacaacgcttgaccagtgcgcatgcctctacgcacgagctggatta 52364838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 814 - 899
Target Start/End: Complemental strand, 15085030 - 15084945
Alignment:
Q  814 agaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 899  Q
    ||||||||| ||||||| || |||| | | |||| ||||||  |||||||||  |||||||||||  ||| |||||||||||||||    
T  15085030 agaacaacggttggccagtgtgcatacctctacgtacgagctagattagtcgtctatctttggtggatcggaaaccggtgtgaaag 15084945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 755 - 899
Target Start/End: Original strand, 47219106 - 47219251
Alignment:
Q  755 cagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaa-caacgtttggccattgcgcatgcatttacgcacgag 853  Q
    |||||| ||||| ||| |||||| ||||||| |||| ||| |   |||||||| ||| | ||| ||||| ||||| | ||||||||| | |||||| |||    
T  47219106 cagtggtaatgagctctttccaaggacgtatccggggaataccaggttcgattcccaagggaaacaacgcttggctagtgcgcatgcctctacgcatgag 47219205  T
Q  854 ccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 899  Q
    ||||||||||||   | ||||| || |||| ||||||||| |||||    
T  47219206 ccggattagtcgtccacctttgatgggtcggaaaccggtgcgaaag 47219251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 816 - 893
Target Start/End: Complemental strand, 50405686 - 50405609
Alignment:
Q  816 aacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtg 893  Q
    ||||||| ||| ||| ||||||||| | |||||||||| ||||||||||||  | | |||||| |||| |||||||||    
T  50405686 aacaacgcttgaccagtgcgcatgcctctacgcacgagtcggattagtcgcccaccattggtgggtcggaaaccggtg 50405609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 57; Significance: 3e-23; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 736 - 899
Target Start/End: Original strand, 7747217 - 7747381
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 834  Q
    |||||||||| ||| ||||||||||||| || |||||||||| ||||||| |||| ||| | | |||||||| | ||||| ||||||||||||||| ||     
T  7747217 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgattcctaggaggaacaacgtttggccagtgt 7747316  T
Q  835 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 899  Q
    |||||| | |||||| |||||||||||||||   | |||| ||| |||| ||||||||| |||||    
T  7747317 gcatgcctctacgcatgagccggattagtcgttcacctttagtgggtcggaaaccggtgcgaaag 7747381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 736 - 865
Target Start/End: Original strand, 22593078 - 22593207
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 834  Q
    |||||||||| ||| ||||||||||||| || |||||||||| ||||||  |||| ||| |||||||||||| ||| || |||||||| ||||||| |||    
T  22593078 aaccaagttgcttgtgctccagtggcaaggagctccttccaaggacgtacccggggaatactgagttcgattcccagggggaacaacg-ttggccagtgc 22593176  T
Q  835 gcatgcatttacgcacgagccggattagtcg 865  Q
    |||||| | |||||| |||||||||||||||    
T  22593177 gcatgcctctacgcatgagccggattagtcg 22593207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 53; E-Value: 8e-21
Query Start/End: Original strand, 736 - 899
Target Start/End: Complemental strand, 10026779 - 10026615
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 834  Q
    |||||||||| ||| |||||| |||||| || |||||||||| |||||| |||| |||| | | ||||||||  |||| | ||||||||||||||| |||    
T  10026779 aaccaagttgcttgggctccaatggcaaggagctccttccaaggacgtactcggaaaataccgggttcgattctcagggggaacaacgtttggccagtgc 10026680  T
Q  835 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 899  Q
    |||||| | |||||| |||||||||||||||   | |||||||| |||| ||||  |||||||||    
T  10026679 gcatgcctctacgcatgagccggattagtcgaccacctttggtgggtcggaaactagtgtgaaag 10026615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 53; E-Value: 8e-21
Query Start/End: Original strand, 736 - 899
Target Start/End: Complemental strand, 18902693 - 18902529
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 834  Q
    |||||||||| ||| ||||||||||||| || |||||||||| |||||| ||||| ||| | | |||||||| ||| || |||||||| ||| ||| |||    
T  18902693 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtactcggggaataccgggttcgattcccacggggaacaacgcttgaccagtgc 18902594  T
Q  835 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 899  Q
    || ||  | |||||||||||| ||||||||||  | |||||||| |||| ||||||||| |||||    
T  18902593 gcgtgtctctacgcacgagccagattagtcgcccacctttggtgggtcggaaaccggtgcgaaag 18902529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 8e-21
Query Start/End: Original strand, 736 - 899
Target Start/End: Original strand, 38005345 - 38005509
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcc-aggagaacaacgtttggccattgc 834  Q
    |||||||||| ||| ||||||||||||| || |||||||||| ||||||  |||| ||| ||| |||||||| || ||| |||||||| ||||||| |||    
T  38005345 aaccaagttgtttgggctccagtggcaaggagctccttccaaggacgtacccggggaatactgggttcgattcccaaggggaacaacgcttggccagtgc 38005444  T
Q  835 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 899  Q
    |||||| | ||| || ||||||||||||||||  | ||||||||  ||| |||| |||| |||||    
T  38005445 gcatgcctctacacatgagccggattagtcgcccacctttggtggatcggaaactggtgcgaaag 38005509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 739 - 893
Target Start/End: Original strand, 21286390 - 21286545
Alignment:
Q  739 caagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgcgca 837  Q
    ||||||| ||||||||||||||||| || |||||||||| ||||||| |||| ||| | | |||||||| ||||| | ||||||| ||| ||| ||||||    
T  21286390 caagttgtttgagctccagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgattcccaggcgaaacaacgcttgaccagtgcgca 21286489  T
Q  838 tgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtg 893  Q
    ||| | ||||||||||| ||||||||| |  ||| |||||| || | |||||||||    
T  21286490 tgcctctacgcacgagctggattagtcactcatcattggtgggttggaaaccggtg 21286545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 736 - 866
Target Start/End: Original strand, 29653571 - 29653701
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 834  Q
    |||||||||| ||| ||||||||||||||||||| ||||||| |||||| || |||||| | |  ||||||||||| ||| ||||||| |||| || |||    
T  29653571 aaccaagttgtttg-gctccagtggcaatgaacttcttccaaggacgtactccggaaataccggattcgatttccagggaaaacaacgcttgggcagtgc 29653669  T
Q  835 gcatgcatttacgcacgagccggattagtcgc 866  Q
    |||||| | ||||||||||||| |||||||||    
T  29653670 gcatgcctctacgcacgagccgaattagtcgc 29653701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 740 - 893
Target Start/End: Original strand, 7787003 - 7787157
Alignment:
Q  740 aagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgcgcat 838  Q
    |||||| ||| ||||||||||||| ||||||||| | | ||||||  |||| ||| | | |||||||||||||| | |||||   ||||||| | |||||    
T  7787003 aagttggttgggctccagtggcaaggaactcctttctaggacgtacccggggaataccgggttcgatttccagggggaacaatacttggccagtacgcat 7787102  T
Q  839 gcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtg 893  Q
    || | |||||||||||||||||||||||  ||||||||||  |||||||||||||    
T  7787103 gcctctacgcacgagccggattagtcgcccatctttggtggatcgaaaaccggtg 7787157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 736 - 864
Target Start/End: Complemental strand, 13026574 - 13026445
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccagga-gaacaacgtttggccattgc 834  Q
    ||||||||||||||| |||||||||||| ||||||||||||| ||||||| | || |||   | ||||||||  ||||| |||||| | ||||||| |||    
T  13026574 aaccaagttgattgaactccagtggcaaggaactccttccaaggacgtatccagggaatatcgggttcgattatcaggaggaacaatgattggccagtgc 13026475  T
Q  835 gcatgcatttacgcacgagccggattagtc 864  Q
    |||||| | |||||| ||||||||||||||    
T  13026474 gcatgcctctacgcatgagccggattagtc 13026445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 739 - 887
Target Start/End: Complemental strand, 45263827 - 45263678
Alignment:
Q  739 caagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccag-gagaacaacgtttggccattgcgca 837  Q
    ||||||| ||| ||||||||||||| || |||||| |||| |  ||| |||| ||| | | |||||||| |||| | |||||||| ||||||| ||||||    
T  45263827 caagttgtttgggctccagtggcaaggagctcctttcaaaaatttatccggggaataccgggttcgattcccagagggaacaacgcttggccagtgcgca 45263728  T
Q  838 tgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaa 887  Q
    ||| | |||||||||||||||||| ||||  |||||||||| ||||||||    
T  45263727 tgcctctacgcacgagccggattaatcgctcatctttggtgggtcgaaaa 45263678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 736 - 899
Target Start/End: Original strand, 331444 - 331608
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 834  Q
    |||||||||| ||| |||||||||||||||| ||| |||||| ||||||  |||| ||| | | |||||||| ||| || |||||||  ||||||| |||    
T  331444 aaccaagttgcttgggctccagtggcaatgagctctttccaaggacgtacccggggaataccgggttcgattcccagggggaacaacacttggccagtgc 331543  T
Q  835 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 899  Q
    |||||| | |||||| ||||||||||||||||  | |||||||| || | ||||| || ||||||    
T  331544 gcatgcttctacgcatgagccggattagtcgcccacctttggtgggttggaaaccagtatgaaag 331608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 752 - 899
Target Start/End: Complemental strand, 25540551 - 25540403
Alignment:
Q  752 ctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgcgcatgcatttacgcac 850  Q
    |||||||||||| || ||| |||||| |||||||  ||| ||| ||| |||||||| | ||| | ||||||| ||||||| ||||||||| | |||||||    
T  25540551 ctccagtggcaaggagctcattccaaggacgtatctggggaatactgggttcgattcctagggggaacaacgcttggccagtgcgcatgcctctacgcac 25540452  T
Q  851 gagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 899  Q
    |||||||||||||||   | |||||||| |||| ||||||||| |||||    
T  25540451 gagccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaag 25540403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 736 - 890
Target Start/End: Complemental strand, 42770814 - 42770659
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 834  Q
    |||||||||| ||| ||||||||||||| || |||||||||| ||||||| || ||||| | | |||| |||  |||| | ||||||| ||||||| |||    
T  42770814 aaccaagttgcttgggctccagtggcaaagagctccttccaaggacgtatccgagaaataccgggttcaattctcagggggaacaacgcttggccagtgc 42770715  T
Q  835 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccg 890  Q
    |||||| | | |||||||||||||||| |||   | |||||||| |||||||||||    
T  42770714 gcatgcctcttcgcacgagccggattaatcgtccacctttggtgggtcgaaaaccg 42770659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 736 - 899
Target Start/End: Original strand, 44945537 - 44945700
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcg 835  Q
    |||||||||| ||| |||| |||||||| || |||||||||| |||||| ||||  ||| ||| ||| |||| ||||  |||||||| ||||  | ||||    
T  44945537 aaccaagttgcttgggctcaagtggcaaggagctccttccaaggacgtactcggagaatactgggtttgattcccagaggaacaacgcttggatagtgcg 44945636  T
Q  836 catgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 899  Q
    ||||| | |||||||||||||||||||||||  | |||| |||  ||| ||||||||| |||||    
T  44945637 catgcctctacgcacgagccggattagtcgcccacctttagtggatcggaaaccggtgcgaaag 44945700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 736 - 901
Target Start/End: Original strand, 2550811 - 2550977
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccagga-gaacaacgtttggccattgc 834  Q
    |||||||||| ||| ||||||||||||| || |||||| ||| ||||||| |||| |||   | |||||||| |||||| |||||||  || |||| |||    
T  2550811 aaccaagttgcttgggctccagtggcaaggagctccttacaaggacgtatccggggaatatcgggttcgattcccaggaggaacaacacttagccagtgc 2550910  T
Q  835 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaagaa 901  Q
    |||||  | |||||| ||||||||||||||||  |  ||||||| || ||||||||||| |||||||    
T  2550911 gcatgtctctacgcatgagccggattagtcgcccacttttggtgggttgaaaaccggtgcgaaagaa 2550977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 736 - 865
Target Start/End: Original strand, 29422158 - 29422288
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccag-gagaacaacgtttggccattgc 834  Q
    |||||||||| ||| |||||||| |||| || |||||| ||| ||||||  |||| ||| ||| ||||||||||||| | |||||||  ||||||| ||     
T  29422158 aaccaagttgtttgggctccagtagcaaggagctcctttcaaggacgtacccggggaatactgggttcgatttccagagggaacaacacttggccaatga 29422257  T
Q  835 gcatgcatttacgcacgagccggattagtcg 865  Q
    |||| | ||||||||||||||||||||||||    
T  29422258 gcatacctttacgcacgagccggattagtcg 29422288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 734 - 901
Target Start/End: Complemental strand, 6358316 - 6358148
Alignment:
Q  734 tgaaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccatt 832  Q
    |||||| ||||| ||| |||||||||||||  | ||| ||| || ||||||| |||| ||| |    ||||||||||||| | ||||||  ||||||| |    
T  6358316 tgaaccgagttgtttgggctccagtggcaagaagctcattcaaaggacgtatccggggaataccagattcgatttccagggggaacaacacttggccagt 6358217  T
Q  833 gcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaagaa 901  Q
    |||||||| | |||||| |||||||||||||||   | | |||||| ||||||||||||||||||||||    
T  6358216 gcgcatgcctctacgcatgagccggattagtcgtccaccattggtgggtcgaaaaccggtgtgaaagaa 6358148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 736 - 899
Target Start/End: Original strand, 8410074 - 8410238
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 834  Q
    |||||||||| ||| ||||||||||||| || |||||||||| ||||||  |||  |||   | |||||||| ||||| | ||||||  ||||||| |||    
T  8410074 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtacccggagaatatcgggttcgattcccagggggaacaacacttggccagtgc 8410173  T
Q  835 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 899  Q
    |||||| | |||||||||||||||||||||||  |  ||||| | |||| ||||||||| |||||    
T  8410174 gcatgcctctacgcacgagccggattagtcgcccacttttggggggtcggaaaccggtgcgaaag 8410238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 768 - 899
Target Start/End: Original strand, 10823035 - 10823167
Alignment:
Q  768 ctccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgc 866  Q
    |||||||||| ||||||  |||| ||| | | ||| |||| ||||||| ||||||| ||||||| ||||||||| | |||||||||||||||||||||||    
T  10823035 ctccttccaaggacgtacccggggaataccgggtttgattcccaggaggaacaacgcttggccagtgcgcatgcctctacgcacgagccggattagtcgc 10823134  T
Q  867 atatctttggtgtgtcgaaaaccggtgtgaaag 899  Q
      | |||| ||| |||| ||||||||| |||||    
T  10823135 ccaccttttgtgggtcggaaaccggtgcgaaag 10823167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 753 - 899
Target Start/End: Original strand, 41220595 - 41220742
Alignment:
Q  753 tccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccagga-gaacaacgtttggccattgcgcatgcatttacgcacg 851  Q
    ||||||||||| || |||||||||| ||||||  |||| ||| | | |||||||| |||||| |||||||| ||||||| ||||||||| | |||||| |    
T  41220595 tccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattcccaggaggaacaacgcttggccagtgcgcatgcctctacgcatg 41220694  T
Q  852 agccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 899  Q
    ||||| ||||||||   | |||| ||| |||| ||||||||| |||||    
T  41220695 agccgaattagtcgttcacctttagtgggtcggaaaccggtgcgaaag 41220742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 779 - 865
Target Start/End: Original strand, 35946725 - 35946811
Alignment:
Q  779 gacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcg 865  Q
    ||||||| |||| ||| | |||||||||| | ||| |||||||| |||||||||| |||||| | ||||||||||||||||||||||    
T  35946725 gacgtatccggggaataccgagttcgattcctaggggaacaacgcttggccattgtgcatgcctctacgcacgagccggattagtcg 35946811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 736 - 893
Target Start/End: Complemental strand, 39201671 - 39201513
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 834  Q
    |||||||||||||| |||  |||||||| || |||||||||| |||||| ||| | ||| | || |||||||  |||| | ||||| ||||||||| ||     
T  39201671 aaccaagttgattgggctatagtggcaaggagctccttccaaggacgtactcgaggaataccgaattcgattctcagggggaacaatgtttggccagtgt 39201572  T
Q  835 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtg 893  Q
    |||||| | |||||| |||||||||||||||   | |||||||| |||| |||||||||    
T  39201571 gcatgcctctacgcatgagccggattagtcgttcacctttggtgggtcggaaaccggtg 39201513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 734 - 899
Target Start/End: Original strand, 44139425 - 44139591
Alignment:
Q  734 tgaaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccatt 832  Q
    |||||||||||| ||| ||||||||||  | ||||||||||||| || | ||  ||| ||| | | |||||||| ||||| | ||||||| ||||||| |    
T  44139425 tgaaccaagttgcttgggctccagtggtgaggaactccttccaaggatgcatctggggaataccgggttcgattcccagggggaacaacgcttggccagt 44139524  T
Q  833 gcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 899  Q
    |||| ||| | |||||||||||||||||||||||  | |  ||||| |||| ||||||||| |||||    
T  44139525 gcgcgtgcctctacgcacgagccggattagtcgcccaccaatggtgggtcggaaaccggtgcgaaag 44139591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 739 - 899
Target Start/End: Original strand, 37560119 - 37560280
Alignment:
Q  739 caagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatt-tccaggagaacaacgtttggccattgcgca 837  Q
    ||||||| ||| |||||||||| ||  | |||||||||| ||||||  || | ||| |   |||||||| || ||| ||||||||||||| || ||||||    
T  37560119 caagttgtttgggctccagtggtaagaagctccttccaaggacgtacccgaggaataccaggttcgattctcaaggggaacaacgtttggtcagtgcgca 37560218  T
Q  838 tgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 899  Q
    ||| | |||||||||||||||||| |||   | ||||| || ||||||||||||||||||||    
T  37560219 tgcctctacgcacgagccggattaatcgtccacctttgatgggtcgaaaaccggtgtgaaag 37560280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 800 - 899
Target Start/End: Original strand, 12455317 - 12455417
Alignment:
Q  800 gttcgatttccaggagaa-caacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaa 898  Q
    |||||||||||||| ||| ||||| || |||| ||||||||| | |||||||||||||||||||||||  | | |||||| |||| ||||||||| ||||    
T  12455317 gttcgatttccaggggaaacaacgcttagccagtgcgcatgcctctacgcacgagccggattagtcgctcaccattggtgggtcggaaaccggtgcgaaa 12455416  T
Q  899 g 899  Q
    |    
T  12455417 g 12455417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 736 - 899
Target Start/End: Original strand, 12864167 - 12864331
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 834  Q
    |||||||||| ||| ||||||||| ||| || |||||||||| |||||||||||| ||| | |  ||||||||||| || |||||||  |||| || |||    
T  12864167 aaccaagttgtttgggctccagtgacaaggagctccttccaatgacgtattcggggaataccggattcgatttccagggggaacaacacttggtcagtgc 12864266  T
Q  835 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 899  Q
    |||||| | | |||| ||||| |||||||||   | | |||||| |||| ||||||||| |||||    
T  12864267 gcatgcctctgcgcatgagccagattagtcgtccaccattggtgggtcggaaaccggtgcgaaag 12864331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 735 - 902
Target Start/End: Original strand, 38962705 - 38962873
Alignment:
Q  735 gaaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattg 833  Q
    ||||||||||| |||  ||||||||| || || ||| || ||| ||||||| |||| ||| | | ||||||||| |||||| ||||||| ||||||| ||    
T  38962705 gaaccaagttgtttggactccagtggtaaggagctcatttcaaggacgtatccggggaataccgggttcgattttcaggaggaacaacgcttggccagtg 38962804  T
Q  834 cgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaagaag 902  Q
    ||||||| | |||||| || ||||||||||||   | |||||||| |||  |||| |||| ||||||||    
T  38962805 cgcatgcctctacgcatgaaccggattagtcgtccacctttggtgggtcagaaactggtgcgaaagaag 38962873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 736 - 866
Target Start/End: Complemental strand, 21180477 - 21180346
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 834  Q
    |||||||||| ||| ||||||||||||| || |||||||||| ||||||  ||   ||| | |  ||||||| ||| ||||||||||  ||||||| |||    
T  21180477 aaccaagttgtttgggctccagtggcaaggagctccttccaaggacgtacccgaagaataccggattcgattcccatggagaacaacacttggccagtgc 21180378  T
Q  835 gcatgcatttacgcacgagccggattagtcgc 866  Q
     ||||| | |||||||||||||||||||||||    
T  21180377 acatgcctctacgcacgagccggattagtcgc 21180346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 816 - 901
Target Start/End: Complemental strand, 9360830 - 9360745
Alignment:
Q  816 aacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaagaa 901  Q
    ||||||||||||||| ||||||||| | ||||||||||||| |||||||||  | |||| ||| | || ||||||||| |||||||    
T  9360830 aacaacgtttggccagtgcgcatgcctctacgcacgagccgaattagtcgcccacctttagtgggccggaaaccggtgcgaaagaa 9360745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 800 - 893
Target Start/End: Original strand, 24179576 - 24179669
Alignment:
Q  800 gttcgatttccaggagaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtg 893  Q
    ||||||||  |||| |||||||||||||||| ||| ||||| | |||||| |||||||||||||||   |||||||||| ||  ||||||||||    
T  24179576 gttcgattctcaggggaacaacgtttggccagtgcacatgcctctacgcatgagccggattagtcgtccatctttggtgggttaaaaaccggtg 24179669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 736 - 899
Target Start/End: Complemental strand, 2528504 - 2528340
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 834  Q
    |||||| ||| ||| |||||||||||||||| |||||||||| |||||| ||| | ||  | | |||||||| ||| || |||||||| |||| || ||     
T  2528504 aaccaaattgtttgggctccagtggcaatgagctccttccaaggacgtactcgaggaacaccgggttcgattcccagggggaacaacgcttggtcagtgt 2528405  T
Q  835 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 899  Q
    |||||| | ||| ||  |||||||||||||||  |||||| ||| |||| |||| |||| |||||    
T  2528404 gcatgcctctacacataagccggattagtcgctcatctttagtgagtcggaaactggtgcgaaag 2528340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 736 - 899
Target Start/End: Complemental strand, 14169772 - 14169608
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatt-tccaggagaacaacgtttggccattgc 834  Q
    |||||||||| ||| ||||||||| ||| ||  || |||||| |||||||||||| |||   | |||||||| ||| || |||||||  ||| ||| |||    
T  14169772 aaccaagttgtttgggctccagtgacaaggagatctttccaaggacgtattcggggaatatcgggttcgattctccgggggaacaacacttgaccagtgc 14169673  T
Q  835 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 899  Q
    |||||  | |||||| |||||||||||||||  || | |||||| |||| ||||||||| |||||    
T  14169672 gcatgtctctacgcatgagccggattagtcgtctaccattggtgggtcggaaaccggtgcgaaag 14169608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 736 - 866
Target Start/End: Original strand, 15079426 - 15079557
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 834  Q
    |||||||||| ||| ||||| ||||||| |||| |||||||| ||||||  |||| ||| | | |||||||||||| || |||||||| ||| ||| ||     
T  15079426 aaccaagttgcttgggctccggtggcaaggaacaccttccaaggacgtacccggggaatacagggttcgatttccagggggaacaacgcttgaccagtgt 15079525  T
Q  835 gcatgcatttacgcacgagccggattagtcgc 866  Q
    |||||  | ||||||||||||  |||||||||    
T  15079526 gcatgactctacgcacgagccaaattagtcgc 15079557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 755 - 901
Target Start/End: Original strand, 16034899 - 16035046
Alignment:
Q  755 cagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgcgcatgcatttacgcacgag 853  Q
    |||||| || ||||||||||||| ||||||| || | ||| | | ||||||||| |||| | ||||||| ||| ||| || |||||| | |||| |||||    
T  16034899 cagtggtaaggaactccttccaaggacgtatccgaggaataccgggttcgattttcaggcggaacaacgcttgaccagtgtgcatgcctatacgtacgag 16034998  T
Q  854 ccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaagaa 901  Q
    |||||||||||||  | | ||| || |||| ||||||||| |||||||    
T  16034999 ccggattagtcgctcaccattgatgagtcggaaaccggtgcgaaagaa 16035046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 751 - 865
Target Start/End: Original strand, 25549686 - 25549801
Alignment:
Q  751 gctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccagg-agaacaacgtttggccattgcgcatgcatttacgca 849  Q
    ||||||||||||| || ||||||||||  ||||||| ||| ||| ||| ||||||||   ||| | |||||| |||||| | ||| ||||| | ||||||    
T  25549686 gctccagtggcaaggagctccttccaagtacgtatttggggaatactgggttcgattcttagggaaaacaacatttggctagtgcacatgcctctacgca 25549785  T
Q  850 cgagccggattagtcg 865  Q
    ||||||||||||||||    
T  25549786 cgagccggattagtcg 25549801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 736 - 898
Target Start/End: Complemental strand, 20612699 - 20612534
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccagga--gaacaacgtttggccattg 833  Q
    |||||||||| ||| ||||||||||||| || |||||||||| |  ||||||||| ||| | | ||||||||  |||||  |||||||  ||||||| ||    
T  20612699 aaccaagttgcttgggctccagtggcaaggagctccttccaaggttgtattcggggaataccgggttcgattctcaggagggaacaacacttggccagtg 20612600  T
Q  834 cgcatgcatttacgcacgagcc-ggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaa 898  Q
    ||||||| | || ||| ||||| ||||||||||   | | |||||| |||| ||||||||| ||||    
T  20612599 cgcatgcctctatgcatgagccgggattagtcgtccaccattggtgggtcggaaaccggtgcgaaa 20612534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 800 - 865
Target Start/End: Complemental strand, 34130400 - 34130335
Alignment:
Q  800 gttcgatttccaggagaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcg 865  Q
    ||||||||| ||||||||||||||||| ||||||| ||||  | |||||| ||||| |||||||||    
T  34130400 gttcgattttcaggagaacaacgtttgaccattgcacatgtctctacgcatgagccagattagtcg 34130335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 815 - 899
Target Start/End: Original strand, 27725963 - 27726047
Alignment:
Q  815 gaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 899  Q
    |||||| | ||||||| ||||||||| | ||||||| |||||||||||||||  | |  ||||| |||| |||||||||||||||    
T  27725963 gaacaatgcttggccagtgcgcatgcctctacgcactagccggattagtcgcccaccaatggtgggtcggaaaccggtgtgaaag 27726047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 736 - 898
Target Start/End: Complemental strand, 10046639 - 10046477
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatt-tccaggagaacaacgtttggccattgc 834  Q
    |||||||||| ||| |||||| |||||| || ||||||||||  |||||| |||  ||| | | |||||||| || |||  ||||||||||| | | |||    
T  10046639 aaccaagttgcttgggctccaatggcaaggagctccttccaagaacgtatccggagaataccgggttcgattctcaagggaaacaacgtttgac-agtgc 10046541  T
Q  835 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaa 898  Q
    |||||| | |||||| |||||||||||||||   | |||||||| |||| ||||  ||||||||    
T  10046540 gcatgcctctacgcatgagccggattagtcgaccacctttggtgggtcggaaactagtgtgaaa 10046477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 740 - 811
Target Start/End: Complemental strand, 20963268 - 20963198
Alignment:
Q  740 aagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca 811  Q
    |||||| ||| ||||||||||||| || |||||||||| ||||||| |||| ||| | ||||||||||||||    
T  20963268 aagttgtttgggctccagtggcaaggacctccttccaatgacgtatccggggaatac-gagttcgatttcca 20963198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 736 - 826
Target Start/End: Original strand, 29697467 - 29697558
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcggga-aatgctgagttcgatttccaggagaacaacgtttg 826  Q
    ||||||| || ||| ||||||||||||| |||||||||||||  |||||  ||| | ||| ||||||| |||| ||||| ||||||||||||    
T  29697467 aaccaaggtgtttgggctccagtggcaaggaactccttccaataacgtacacggaagaatactgagtttgattcccaggggaacaacgtttg 29697558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 731 - 849
Target Start/End: Complemental strand, 40969083 - 40968964
Alignment:
Q  731 atatgaaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggcc 829  Q
    ||||||||||||||| ||| |||| |||||||||||  || |||||| |||||  || || ||| | | |||||||||||| ||| |||||||||||| |    
T  40969083 atatgaaccaagttgcttgggctctagtggcaatgagttcattccaaggacgttctcagggaataccgggttcgatttccagggaaaacaacgtttggtc 40968984  T
Q  830 attgcgcatgcatttacgca 849  Q
    | |||| |||| | ||||||    
T  40968983 agtgcgaatgcctctacgca 40968964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 734 - 899
Target Start/End: Complemental strand, 3811856 - 3811690
Alignment:
Q  734 tgaaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccag-gagaacaacgtttggccatt 832  Q
    |||||||||||| |||  || || |||||| ||||||||||||| |||||| ||| | |||   | |||||||| |||| | |||||||  |||| || |    
T  3811856 tgaaccaagttgtttggtcttcaatggcaaggaactccttccaaggacgtactcgaggaatatcgggttcgattcccagagggaacaacacttggtcaat 3811757  T
Q  833 gcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 899  Q
    |||||||| | |||||| ||||||||||| ||||  | |||||||| |||  |||||| || |||||    
T  3811756 gcgcatgcctctacgcatgagccggattactcgcccacctttggtgggtcagaaaccgatgcgaaag 3811690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 751 - 865
Target Start/End: Complemental strand, 16813312 - 16813198
Alignment:
Q  751 gctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcgcatgcatttacgcac 850  Q
    |||||| || ||| || |||||||||| |||||| ||||  ||| |  ||||| | || |||| |||||||||||| ||| | ||||||| | || ||||    
T  16813312 gctccactgacaaggagctccttccaaggacgtactcggagaataccaagttcaactttcaggggaacaacgtttgaccagtacgcatgcctctatgcac 16813213  T
Q  851 gagccggattagtcg 865  Q
    |||||||||||||||    
T  16813212 gagccggattagtcg 16813198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 751 - 865
Target Start/End: Complemental strand, 16852591 - 16852477
Alignment:
Q  751 gctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcgcatgcatttacgcac 850  Q
    |||||| || ||| || |||||||||| |||||| ||||  ||| |  ||||| | || |||| |||||||||||| ||| | ||||||| | || ||||    
T  16852591 gctccactgacaaggagctccttccaaggacgtactcggagaataccaagttcaactttcaggggaacaacgtttgaccagtacgcatgcctctatgcac 16852492  T
Q  851 gagccggattagtcg 865  Q
    |||||||||||||||    
T  16852491 gagccggattagtcg 16852477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 801 - 864
Target Start/End: Complemental strand, 28525554 - 28525489
Alignment:
Q  801 ttcgatttccaggag--aacaacgtttggccattgcgcatgcatttacgcacgagccggattagtc 864  Q
    ||||||||||||| |  ||||||  ||||||| ||||||||| | |||||||||||||||||||||    
T  28525554 ttcgatttccagggggaaacaacacttggccagtgcgcatgcctctacgcacgagccggattagtc 28525489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 736 - 861
Target Start/End: Original strand, 34356149 - 34356275
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 834  Q
    |||||||||| ||| ||||||||||||| || ||  |||||| |||||||  ||| ||| | | |||||||||||| || |||||||  |||| || |||    
T  34356149 aaccaagttgtttgggctccagtggcaaggagctatttccaaggacgtatctggggaataccgggttcgatttccagggggaacaacacttggtcagtgc 34356248  T
Q  835 gcatgcatttacgcacgagccggatta 861  Q
    |||||| | || ||| |||||||||||    
T  34356249 gcatgcctctatgcatgagccggatta 34356275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 751 - 864
Target Start/End: Complemental strand, 39807033 - 39806919
Alignment:
Q  751 gctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaa-caacgtttggccattgcgcatgcatttacgca 849  Q
    |||||||||||||    |||||| ||| ||||||  |||| ||| | | |||||||| ||| ||||| ||||||||||||| ||||||||| | ||| ||    
T  39807033 gctccagtggcaagatgctccttacaaggacgtacccggggaataccgggttcgattcccaagagaaacaacgtttggccagtgcgcatgcctctacaca 39806934  T
Q  850 cgagccggattagtc 864  Q
    |||| ||||||||||    
T  39806933 cgagtcggattagtc 39806919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 812 - 893
Target Start/End: Original strand, 10669612 - 10669693
Alignment:
Q  812 ggagaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtg 893  Q
    ||||||||||| ||||||| ||||||||  | |||||||||| ||||||| |||   | |||||||| |||| |||||||||    
T  10669612 ggagaacaacgcttggccagtgcgcatgtctctacgcacgagtcggattaatcgttcacctttggtgggtcggaaaccggtg 10669693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 736 - 785
Target Start/End: Complemental strand, 23500844 - 23500795
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtat 785  Q
    |||||||||| ||| ||||| ||||||| || ||||||||||||||||||    
T  23500844 aaccaagttgtttgggctccggtggcaaggagctccttccaaagacgtat 23500795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 54; Significance: 2e-21; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 736 - 865
Target Start/End: Complemental strand, 9168414 - 9168286
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcg 835  Q
    |||||||||| ||||||||||||||||| || |||||||||||||||||| |||| ||| | |||  ||||| ||||  |||||||| ||||||| ||||    
T  9168414 aaccaagttgcttgagctccagtggcaagga-ctccttccaaagacgtatccggggaataccgagaacgattcccagaggaacaacgcttggccagtgcg 9168316  T
Q  836 catgcatttacgcacgagccggattagtcg 865  Q
    ||| | | |||||| |||||||||||||||    
T  9168315 catacctctacgcatgagccggattagtcg 9168286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 736 - 863
Target Start/End: Complemental strand, 38897881 - 38897754
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcg 835  Q
    |||||||||| |||| ||| |||||||| || ||| || ||| |||||||  ||| ||| | | |||||||||||||| |||||||| ||||||| ||||    
T  38897881 aaccaagttgcttgaactcaagtggcaaggagctctttacaaggacgtatatggggaataccgggttcgatttccaggggaacaacgcttggccagtgcg 38897782  T
Q  836 catgcatttacgcacgagccggattagt 863  Q
    ||||| | ||||||||||||||||||||    
T  38897781 catgcctctacgcacgagccggattagt 38897754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 736 - 899
Target Start/End: Original strand, 1538375 - 1538539
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 834  Q
    |||||||||| ||| ||||||||||||| || |||||||| | |||||||||||| ||| | | |||||||| ||| || |||||||  ||||||| |||    
T  1538375 aaccaagttgtttgggctccagtggcaaggagctccttccgaggacgtattcggggaataccgggttcgattcccagggggaacaacacttggccagtgc 1538474  T
Q  835 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 899  Q
    |||||| | |||||| ||||||||||| |||   | | |||||| |||| ||||||||| |||||    
T  1538475 gcatgcctctacgcatgagccggattaatcgtccaccattggtgggtcggaaaccggtgcgaaag 1538539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 736 - 899
Target Start/End: Complemental strand, 5732083 - 5731919
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccagga-gaacaacgtttggccattgc 834  Q
    |||||||||| ||| ||||||||||||| || |||||||||| ||||||  |||| ||| | | |||||||| |||||| |||||||| ||||||| |||    
T  5732083 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattcccaggaggaacaacgcttggccagtgc 5731984  T
Q  835 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 899  Q
    |||||| | |||| | ||||| |||||||||   | |||| ||| |||| ||||||||| |||||    
T  5731983 gcatgcctctacgtatgagccagattagtcgttcacctttagtgggtcggaaaccggtgcgaaag 5731919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 735 - 865
Target Start/End: Original strand, 19572667 - 19572798
Alignment:
Q  735 gaaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattg 833  Q
    ||||||||||| ||| ||||||||||||| || |||||||||| ||||||| |||| ||| | | ||| |||| ||| || |||||||  ||||||| ||    
T  19572667 gaaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtatccggggaataccgggttagattcccagggggaacaacacttggccagtg 19572766  T
Q  834 cgcatgcatttacgcacgagccggattagtcg 865  Q
    ||||||| | |||||| |||||||||||||||    
T  19572767 cgcatgcctctacgcatgagccggattagtcg 19572798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 751 - 901
Target Start/End: Complemental strand, 25417331 - 25417180
Alignment:
Q  751 gctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgcgcatgcatttacgca 849  Q
    ||||||||||||| || |||||||||| |||||| ||||| ||| | | |||||||| ||||| | ||||||| ||||||| ||||||||| | |||| |    
T  25417331 gctccagtggcaaggagctccttccaaggacgtactcggggaataccgggttcgattcccagggggaacaacgcttggccagtgcgcatgcctctacgaa 25417232  T
Q  850 cgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaagaa 901  Q
    |||||||||||||||   || | |||||| |||  ||||||||| |||||||    
T  25417231 cgagccggattagtcatttaccattggtgggtcagaaaccggtgcgaaagaa 25417180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 736 - 865
Target Start/End: Original strand, 37263185 - 37263314
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcg 835  Q
    |||||||||| ||| ||||||||||||| ||  |||||| || ||||||  |||| |||   | ||||||||  |||| |||||||| ||||||| ||||    
T  37263185 aaccaagttgcttgggctccagtggcaaggagttccttctaaggacgtacccggggaatatcgggttcgattctcaggggaacaacgcttggccaatgcg 37263284  T
Q  836 catgcatttacgcacgagccggattagtcg 865  Q
    ||||| | ||||||||||||||||||||||    
T  37263285 catgcctctacgcacgagccggattagtcg 37263314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 736 - 865
Target Start/End: Complemental strand, 41163622 - 41163493
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcg 835  Q
    |||||||||| ||| ||||||||||||| || ||||||||||  |||||  |||| ||| | | |||||||| ||||| |||||||||||||||| |||     
T  41163622 aaccaagttgtttgggctccagtggcaaggagctccttccaagaacgtacccggggaataccgggttcgattcccaggggaacaacgtttggccagtgca 41163523  T
Q  836 catgcatttacgcacgagccggattagtcg 865  Q
    ||||  | |||||| |||| ||||||||||    
T  41163522 catgtctctacgcatgagctggattagtcg 41163493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 736 - 899
Target Start/End: Original strand, 9812816 - 9812980
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 834  Q
    |||||||||| |||  |||||||||||| || |||||||||| ||||||  |||| ||| | | |||||||| | ||||| ||||||| ||||||| ||     
T  9812816 aaccaagttgtttggactccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattccgaggaggaacaacgcttggccagtgt 9812915  T
Q  835 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 899  Q
    |||||| | |||||| || |||||||||||||  | |||||||| |||  ||||||||| |||||    
T  9812916 gcatgcttctacgcatgaaccggattagtcgcccacctttggtgggtcagaaaccggtgcgaaag 9812980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 736 - 899
Target Start/End: Original strand, 42086271 - 42086435
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 834  Q
    |||||||||| ||| ||||| ||||||| || |||||||||| ||||||  || | ||| | | |||||||| ||||| | ||||||| ||| ||| |||    
T  42086271 aaccaagttgcttgggctccggtggcaaggagctccttccaaggacgtacccgaggaataccgggttcgattcccagggggaacaacgcttgaccagtgc 42086370  T
Q  835 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 899  Q
    |||||| | |||||| |||||||||||||||   | |||||||| |||| ||||||||| |||||    
T  42086371 gcatgcctctacgcatgagccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaag 42086435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 769 - 899
Target Start/End: Original strand, 12081885 - 12082016
Alignment:
Q  769 tccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgca 867  Q
    |||||| || ||||||| |||| ||| ||| ||||||||  |||| | ||||||| ||||||| ||||||||||| ||||||||||||| ||||||||      
T  12081885 tccttcaaaggacgtatccggggaatactgggttcgattctcagggggaacaacgcttggccagtgcgcatgcatctacgcacgagccgaattagtcgtc 12081984  T
Q  868 tatctttggtgtgtcgaaaaccggtgtgaaag 899  Q
     | |||||||| |||| ||| |||||||||||    
T  12081985 cacctttggtgagtcggaaatcggtgtgaaag 12082016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 736 - 893
Target Start/End: Complemental strand, 3654075 - 3653919
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcg 835  Q
    |||||||||| ||| ||||||||| |||||| ||| |||||| ||||||  |||  ||| | | |||||||| | || ||||||||| ||| ||| ||||    
T  3654075 aaccaagttgtttgggctccagtgacaatgagctctttccaaggacgtacccggagaataccgggttcgattcctag-agaacaacgcttgaccagtgcg 3653977  T
Q  836 catgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtg 893  Q
    ||||| | |||||||||| |||||||||||   | ||||||||  |||||||||||||    
T  3653976 catgcctctacgcacgaggcggattagtcgtccacctttggtggatcgaaaaccggtg 3653919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 736 - 899
Target Start/End: Original strand, 5079275 - 5079438
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 834  Q
    |||||||||| ||| | ||| ||||||| || ||||||||||  |||||| || | ||| | | | | |||||||||| | |||| || |||| || |||    
T  5079275 aaccaagttgtttgggttccggtggcaaagagctccttccaagcacgtatccgtggaataccggggttgatttccagggggaacagcgcttggtcaatgc 5079374  T
Q  835 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 899  Q
    |||||| | |||||||||||||||||||||||  | |||||||| |||||||||||||| |||||    
T  5079375 gcatgcttctacgcacgagccggattagtcgcccacctttggtg-gtcgaaaaccggtgcgaaag 5079438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 736 - 899
Target Start/End: Original strand, 12704958 - 12705122
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccagga-gaacaacgtttggccattgc 834  Q
    |||||||||| |||  |||||||||||| || |||||||||| ||||||  |||| ||| | | |||||||| | |||| |||||||| ||| ||| ||     
T  12704958 aaccaagttgtttggactccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattccgaggaggaacaacgcttgaccagtgt 12705057  T
Q  835 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 899  Q
    |||||| | |||||| || |||||||||||||  | |||||||| |||  ||||||||| |||||    
T  12705058 gcatgcttctacgcatgaaccggattagtcgcccacctttggtgggtcagaaaccggtgcgaaag 12705122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 736 - 875
Target Start/End: Original strand, 26077085 - 26077225
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccag-gagaacaacgtttggccattgc 834  Q
    |||||||||| ||| |||||||||| || || ||| |||||| |||||||| ||| ||| ||  |||||||| |||| | |||||||| ||||||| |||    
T  26077085 aaccaagttgtttgggctccagtggtaaggagctcattccaaggacgtatttggggaatactaggttcgattcccagagggaacaacgcttggccagtgc 26077184  T
Q  835 gcatgcatttacgcacgagccggattagtcgcatatctttg 875  Q
     ||||| | |||||||||||| ||||| ||||  |||||||    
T  26077185 acatgcctctacgcacgagccagattaatcgctcatctttg 26077225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 736 - 866
Target Start/End: Original strand, 7866525 - 7866656
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 834  Q
    |||||||||| |||  |||||||||||| || |||||||||| ||||||  || | ||| | | |||||||| | ||||| ||||||| ||||||| ||     
T  7866525 aaccaagttgcttggactccagtggcaaggagctccttccaaggacgtacccgaggaataccgggttcgattccgaggaggaacaacgcttggccagtgt 7866624  T
Q  835 gcatgcatttacgcacgagccggattagtcgc 866  Q
    |||||| | ||||||||| |||||||||||||    
T  7866625 gcatgcctctacgcacgaaccggattagtcgc 7866656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 777 - 899
Target Start/End: Original strand, 40117400 - 40117523
Alignment:
Q  777 aagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttg 875  Q
    |||||||||||||| |||   || ||||||||||||| | ||||||| ||||||| ||||||||| | |||||| ||||||||||| |||   | |||||    
T  40117400 aagacgtattcggggaatatcgaattcgatttccagggggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattaatcgttcacctttg 40117499  T
Q  876 gtgtgtcgaaaaccggtgtgaaag 899  Q
    |||  ||||||||||||| |||||    
T  40117500 gtggatcgaaaaccggtgcgaaag 40117523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 816 - 893
Target Start/End: Complemental strand, 6764539 - 6764462
Alignment:
Q  816 aacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtg 893  Q
    ||||| ||||||| | ||||||||| | ||||||||||||||||||||||| |||||||| || |||| |||| ||||    
T  6764539 aacaatgtttggctagtgcgcatgcctctacgcacgagccggattagtcgcctatctttgttgggtcggaaactggtg 6764462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 735 - 899
Target Start/End: Original strand, 8513462 - 8513627
Alignment:
Q  735 gaaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaa-caacgtttggccattg 833  Q
    ||||||||||| |||  ||| |||||||| || |||||||||| ||||||  |||| ||| | | |||||||| | ||| ||| ||| | ||||||| ||    
T  8513462 gaaccaagttgcttggactcaagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattcctaggggaaacaatgcttggccagtg 8513561  T
Q  834 cgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 899  Q
    | ||||| | |||||||||||| |||||||||   | |||||||| |||| ||||||||| |||||    
T  8513562 cacatgcctctacgcacgagccagattagtcgtccacctttggtgggtcggaaaccggtgcgaaag 8513627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 736 - 839
Target Start/End: Original strand, 16755005 - 16755109
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 834  Q
    |||||||||  ||| ||| ||||||||| || ||| |||||||||||||| |||| ||| ||| ||||||||| |||||| ||||||  ||||||| |||    
T  16755005 aaccaagttccttgggcttcagtggcaaggagctctttccaaagacgtatccggggaatactgggttcgattttcaggagaaacaacacttggccagtgc 16755104  T
Q  835 gcatg 839  Q
    |||||    
T  16755105 gcatg 16755109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 746 - 790
Target Start/End: Original strand, 28862779 - 28862823
Alignment:
Q  746 attgagctccagtggcaatgaactccttccaaagacgtattcggg 790  Q
    |||||||||||||||||| || |||||||||||||||||||||||    
T  28862779 attgagctccagtggcaaggagctccttccaaagacgtattcggg 28862823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 752 - 811
Target Start/End: Original strand, 18327730 - 18327789
Alignment:
Q  752 ctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca 811  Q
    |||||||||||| || |||||||||| ||||||||| |||||| ||| ||||||||||||    
T  18327730 ctccagtggcaaggagctccttccaaggacgtattcaggaaatactgggttcgatttcca 18327789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 736 - 861
Target Start/End: Complemental strand, 20682781 - 20682654
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactcc-ttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattg 833  Q
    |||||||||| ||| ||||||||| ||| || |||| ||| || ||||||  |||| |||  || ||| |||||||||| | ||||||| ||||||| ||    
T  20682781 aaccaagttgcttgggctccagtgacaaggagctccattctaaggacgtacccggggaatattgggttagatttccagggggaacaacgcttggccagtg 20682682  T
Q  834 cgcatgcatttacgcacgagccggatta 861  Q
    ||||||| | ||||||||||||||||||    
T  20682681 cgcatgcctctacgcacgagccggatta 20682654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 806 - 893
Target Start/End: Complemental strand, 24463978 - 24463891
Alignment:
Q  806 tttccaggagaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtg 893  Q
    |||| ||| |||||||| ||||||| ||||||||| | || ||||||||||||||||||||  | ||||  || ||||||||||||||    
T  24463978 tttcaaggcgaacaacgattggccagtgcgcatgcctctatgcacgagccggattagtcgcccacctttactgggtcgaaaaccggtg 24463891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 756 - 901
Target Start/End: Complemental strand, 11845944 - 11845798
Alignment:
Q  756 agtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgcgcatgcatttacgcacgagc 854  Q
    |||||||| || |||||||||| ||||||  || |||||   | |||||||||| ||| | ||||||||||||||| ||||||||| | |||| | ||||    
T  11845944 agtggcaaggagctccttccaaggacgtacccgagaaatatcgggttcgatttcgagggggaacaacgtttggccagtgcgcatgcctctacgtatgagc 11845845  T
Q  855 cggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaagaa 901  Q
    || |||| ||||  | ||||| || || | |||||||||||||||||    
T  11845844 cgaattaatcgcccacctttgatgggttggaaaccggtgtgaaagaa 11845798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 800 - 901
Target Start/End: Complemental strand, 14588716 - 14588614
Alignment:
Q  800 gttcgatttccaggag-aacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaa 898  Q
    ||||||||| |||||| || |||| ||| ||| ||||||||| | |||||| |||||||||||||||   | |||||||| | |||||||||||| ||||    
T  14588716 gttcgattttcaggaggaataacgcttgaccagtgcgcatgcctctacgcatgagccggattagtcgtccacctttggtgagccgaaaaccggtgcgaaa 14588617  T
Q  899 gaa 901  Q
    |||    
T  14588616 gaa 14588614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 736 - 861
Target Start/End: Complemental strand, 18136443 - 18136317
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 834  Q
    |||||||||| ||| ||||||||||||| || |||||||||||||||||| |||  ||| | | |||||||| ||| || |||||||  |||| || ||     
T  18136443 aaccaagttgtttgggctccagtggcaaggagctccttccaaagacgtatccggagaataccgggttcgattcccagggggaacaacacttggtcagtgt 18136344  T
Q  835 gcatgcatttacgcacgagccggatta 861  Q
    |||||| | ||| || |||||||||||    
T  18136343 gcatgcctctacacatgagccggatta 18136317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 736 - 865
Target Start/End: Original strand, 20525782 - 20525912
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccagg-agaacaacgtttggccattgc 834  Q
    |||||||||| ||| ||||||||||||| || |||||| ||| || |||| |||| |||   | |||||||| |||||  |||||||  || |||| |||    
T  20525782 aaccaagttgcttgggctccagtggcaaggagctcctttcaaggatgtatccggggaatatcgggttcgattcccaggtggaacaacacttcgccagtgc 20525881  T
Q  835 gcatgcatttacgcacgagccggattagtcg 865  Q
    |||||| | |||||| |||||||||||||||    
T  20525882 gcatgcctctacgcatgagccggattagtcg 20525912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 736 - 857
Target Start/End: Original strand, 28857072 - 28857194
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 834  Q
    |||||||||| ||| ||||||||||||| || |||||||||| |||| |  |||| ||| | | |||||||| ||| || |||||||  ||||||| |||    
T  28857072 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgcacccggggaataccgggttcgattcccagggggaacaacacttggccagtgc 28857171  T
Q  835 gcatgcatttacgcacgagccgg 857  Q
    |||||| | |||||| |||||||    
T  28857172 gcatgcctctacgcatgagccgg 28857194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 736 - 852
Target Start/End: Complemental strand, 35403675 - 35403558
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatt-tccaggagaacaacgtttggccattgc 834  Q
    |||||| ||| ||| ||||||||||||| || |||||||||| |||||| ||||||||| | | |||||||| |   || |||||||| ||||||| |||    
T  35403675 aaccaacttgtttgggctccagtggcaaggagctccttccaaggacgtactcgggaaataccgggttcgattctaagggggaacaacgcttggccaatgc 35403576  T
Q  835 gcatgcatttacgcacga 852  Q
    |||||  | |||||||||    
T  35403575 gcatgtctctacgcacga 35403558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 815 - 899
Target Start/End: Original strand, 9805028 - 9805112
Alignment:
Q  815 gaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 899  Q
    |||||||| ||||||| ||||||||| | |||||| |||||||||||||||   | |||||||| |||| |||| |||| |||||    
T  9805028 gaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgtccacctttggtgggtcggaaacaggtgcgaaag 9805112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 731 - 866
Target Start/End: Complemental strand, 35561986 - 35561850
Alignment:
Q  731 atatgaaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccag-gagaacaacgtttggcc 829  Q
    |||| |||||||||| |||  |||||||||||| || |||||||||| ||||||| |||| |||   |||||||| |||||| | |||||||   || ||    
T  35561986 atattaaccaagttgcttggactccagtggcaaagagctccttccaatgacgtatccggggaatatcgagttcgacttccagagggaacaacacctgacc 35561887  T
Q  830 attgcgcatgcatttacgcacgagccggattagtcgc 866  Q
    | ||||||||| | ||| || ||||| ||||||||||    
T  35561886 agtgcgcatgcctctacacatgagccagattagtcgc 35561850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 815 - 899
Target Start/End: Original strand, 41801001 - 41801085
Alignment:
Q  815 gaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 899  Q
    |||||||| ||| ||| ||||||||  | ||||||||||||||||||||||   ||||||| || |||| ||| |||||||||||    
T  41801001 gaacaacgcttgaccaatgcgcatgtctctacgcacgagccggattagtcgttcatctttgatgggtcggaaagcggtgtgaaag 41801085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 736 - 899
Target Start/End: Original strand, 2485141 - 2485304
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcg 835  Q
    |||||||||| |||  ||||| |||||| || ||| |||||| ||||||||| || ||| ||| |||||||| | ||| |||||||  | ||||  ||||    
T  2485141 aaccaagttgtttggactccaatggcaaggagctcattccaaggacgtattcagggaatactgggttcgattcctaggggaacaaccctgggcctgtgcg 2485240  T
Q  836 catgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 899  Q
    ||||| | |||| | ||| ||||||||||||  | ||||| || |||| |||||| || |||||    
T  2485241 catgcctctacgtatgagtcggattagtcgctcacctttgatgggtcggaaaccgatgcgaaag 2485304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 798 - 898
Target Start/End: Original strand, 21487623 - 21487721
Alignment:
Q  798 gagttcgatttccaggag-aacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtga 896  Q
    ||||||||||| |||||| ||||||||||||| | ||||||||| | |   |||||||||||||||||||  | ||||  || |||||||||||||| ||    
T  21487623 gagttcgattttcaggaggaacaacgtttggctagtgcgcatgcctct---cacgagccggattagtcgcccacctttaatgggtcgaaaaccggtgcga 21487719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 815 - 878
Target Start/End: Original strand, 30995145 - 30995208
Alignment:
Q  815 gaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtg 878  Q
    |||||||  |||||||  |||||||| | |||||||||||||||||||||||  ||||||||||    
T  30995145 gaacaacacttggccagggcgcatgcctctacgcacgagccggattagtcgctcatctttggtg 30995208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 736 - 790
Target Start/End: Original strand, 1826801 - 1826855
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcggg 790  Q
    |||||||||| ||| ||| |||| ||||||| ||||||||||||||||| |||||    
T  1826801 aaccaagttgtttgggcttcagtagcaatgagctccttccaaagacgtactcggg 1826855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 736 - 865
Target Start/End: Original strand, 30349523 - 30349653
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgc 834  Q
    |||||||||| ||| ||||||||||||| ||  ||||||||| ||||||| |||| ||| | | ||| |||||| | || |||||| | ||||||| |||    
T  30349523 aaccaagttgtttgggctccagtggcaaggagttccttccaaggacgtatccggggaataccgggtttgatttctagggggaacaatgattggccagtgc 30349622  T
Q  835 gcatgcatttacgcacgagccggattagtcg 865  Q
    |||||| | || ||| |||| | ||||||||    
T  30349623 gcatgcctctatgcatgagctgaattagtcg 30349653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 815 - 893
Target Start/End: Complemental strand, 39099862 - 39099784
Alignment:
Q  815 gaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtg 893  Q
    |||||||  ||||||| ||| ||||| | |||||| ||||||||||||||||  | |||||||| |||| |||||||||    
T  39099862 gaacaacacttggccagtgcacatgcctctacgcatgagccggattagtcgcccacctttggtgggtcggaaaccggtg 39099784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 815 - 865
Target Start/End: Complemental strand, 42291588 - 42291538
Alignment:
Q  815 gaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcg 865  Q
    |||||||| ||||||| ||| ||||| | ||||||||||||||||||||||    
T  42291588 gaacaacgcttggccagtgcacatgcctctacgcacgagccggattagtcg 42291538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 736 - 889
Target Start/End: Complemental strand, 18294646 - 18294493
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcg 835  Q
    |||||||||| |||  || ||||| ||| ||||||||||||| ||| || ||||  ||| | | |||| || |||||| |||||||| |||| || ||||    
T  18294646 aaccaagttgtttggacttcagtgacaaggaactccttccaaggacatactcggagaataccgggttcaatatccaggggaacaacgcttggtcagtgcg 18294547  T
Q  836 catgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaacc 889  Q
    ||| | | ||| || || |||||||| ||||  |||||||||| |||| |||||    
T  18294546 catacctctacacatgaaccggattaatcgcccatctttggtgggtcggaaacc 18294493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 736 - 785
Target Start/End: Original strand, 23383592 - 23383641
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtat 785  Q
    |||||||||| ||| ||||||||||||| || |||||||||| |||||||    
T  23383592 aaccaagttgtttgggctccagtggcaaggagctccttccaaggacgtat 23383641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 812 - 861
Target Start/End: Original strand, 24875366 - 24875415
Alignment:
Q  812 ggagaacaacgtttggccattgcgcatgcatttacgcacgagccggatta 861  Q
    ||||||||||||||| ||| ||||||||  | ||||||||||||||||||    
T  24875366 ggagaacaacgtttgaccagtgcgcatgtctctacgcacgagccggatta 24875415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 805 - 866
Target Start/End: Original strand, 25452939 - 25453000
Alignment:
Q  805 atttccaggagaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgc 866  Q
    |||| |||| |||||| ||||| ||| || |||||| | |||||||||||||||||||||||    
T  25452939 attttcaggggaacaatgtttgaccagtgtgcatgcctctacgcacgagccggattagtcgc 25453000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 765 - 865
Target Start/End: Complemental strand, 35638167 - 35638066
Alignment:
Q  765 gaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgcgcatgcatttacgcacgagccggattagt 863  Q
    ||||||||||||  |||||||| ||| |||  ||| |||||||| |||||| |||||||||||| || || |||| | | |||||||||| | |||||||    
T  35638167 gaactccttccagggacgtatttggggaatattgaattcgattttcaggaggaacaacgtttggtcagtgtgcatacctctacgcacgagtcagattagt 35638068  T
Q  864 cg 865  Q
    ||    
T  35638067 cg 35638066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 49; Significance: 2e-18; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 736 - 893
Target Start/End: Original strand, 68463 - 68618
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 834  Q
    |||||||||| ||| |||| |||||||| || |||||||||| ||||||  ||||||||   | |||||||| ||||| | ||||||| ||||    |||    
T  68463 aaccaagttgtttgggctctagtggcaaggagctccttccaaggacgtacccgggaaatatcgggttcgattcccagggggaacaacgcttggg---tgc 68559  T
Q  835 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtg 893  Q
    |||||| | |||||||||||||||||||||||  | |||||||| ||||||||||||||    
T  68560 gcatgcctctacgcacgagccggattagtcgcccacctttggtgggtcgaaaaccggtg 68618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 46; Significance: 1e-16; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 736 - 892
Target Start/End: Original strand, 40990 - 41147
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatt-tccaggagaacaacgtttggccattgc 834  Q
    |||||||||| ||| ||||||||||||| || |||||||||  |||||| || || |||   | |||||||| || ||| |||||||  |||| || ||     
T  40990 aaccaagttgtttgggctccagtggcaaggagctccttccatggacgtactcagggaatatcgggttcgattctcaaggggaacaacacttggtcagtgt 41089  T
Q  835 gcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggt 892  Q
    |||||| | |||||||||||||||||||||||  |||||||||| |||| ||||||||    
T  41090 gcatgcctctacgcacgagccggattagtcgcccatctttggtgagtcggaaaccggt 41147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 41; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 742 - 866
Target Start/End: Complemental strand, 95136 - 95013
Alignment:
Q  742 gttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcgcatgca 841  Q
    |||| ||| |||||| |||||| || ||||||||||  | |||| |||| ||| |   |||||||||| |||| ||||||||||| ||| |||||||||     
T  95136 gttgcttgggctccaatggcaaggagctccttccaagaaagtatccggggaataccaggttcgatttctagga-aacaacgtttgaccagtgcgcatgcc 95038  T
Q  842 tttacgcacgagccggattagtcgc 866  Q
    |||||||| ||||||||||||||||    
T  95037 tttacgcatgagccggattagtcgc 95013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 40; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 739 - 898
Target Start/End: Original strand, 186467 - 186626
Alignment:
Q  739 caagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcgcat 838  Q
    ||||||| |||||||| |||||||| || | ||||| || || ||||| ||  |||   | ||||||||||  |||||| || |||||| || ||| |||    
T  186467 caagttggttgagctctagtggcaaggagcaccttctaaggatgtatttggagaatatcgggttcgatttcagggagaataatgtttggtcagtgcacat 186566  T
Q  839 gcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaa 898  Q
    || | ||||||||||||||||||||||   |||||| ||| |||| ||||||||||||||    
T  186567 gcctctacgcacgagccggattagtcgttcatctttagtgggtcggaaaccggtgtgaaa 186626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 844 - 899
Target Start/End: Original strand, 224372 - 224427
Alignment:
Q  844 tacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 899  Q
    ||||||||||||||||||||||   |||||||||| |||| ||||||||| |||||    
T  224372 tacgcacgagccggattagtcgtccatctttggtgggtcggaaaccggtgcgaaag 224427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0209 (Bit Score: 39; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0209
Description:

Target: scaffold0209; HSP #1
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 736 - 866
Target Start/End: Original strand, 12521 - 12650
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcg 835  Q
    |||||||||| ||| |||| |||||||| || || ||||||| |||||| ||| ||||| | | |||||||| | ||| |||||||| ||| ||| ||||    
T  12521 aaccaagttgtttgggctctagtggcaaggagctacttccaaggacgtactcgagaaataccgggttcgattcctagg-gaacaacgcttgaccagtgcg 12619  T
Q  836 catgcatttacgcacgagccggattagtcgc 866  Q
    ||||| | |||||| ||| ||||||||||||    
T  12620 catgcctctacgcatgagtcggattagtcgc 12650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 39; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 736 - 865
Target Start/End: Original strand, 26129 - 26259
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggag-aacaacgtttggccattgc 834  Q
    |||||||||| |||  ||| ||||||||  ||||||||| || ||| ||   ||| ||| ||| |||||||||||||| | ||||||| ||||||| ||     
T  26129 aaccaagttgcttggactctagtggcaagaaactccttctaaggacatacctggggaatactgggttcgatttccagggggaacaacgcttggccagtgt 26228  T
Q  835 gcatgcatttacgcacgagccggattagtcg 865  Q
    |||||| | ||||||||||||||||||||||    
T  26229 gcatgcctctacgcacgagccggattagtcg 26259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 38; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 801 - 865
Target Start/End: Original strand, 9856 - 9921
Alignment:
Q  801 ttcgatttccaggag-aacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcg 865  Q
    ||||||||||||| | ||||||| ||||||| ||||||||| | ||||||||||||||||||||||    
T  9856 ttcgatttccagggggaacaacgcttggccagtgcgcatgcctctacgcacgagccggattagtcg 9921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 37; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 800 - 899
Target Start/End: Complemental strand, 1713 - 1613
Alignment:
Q  800 gttcgatttccaggag-aacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaa 898  Q
    |||||||||||||| | ||||||| || |||| ||||||||| | |||||| |||||  |||||||||  | |||||||| |||||||||||||| ||||    
T  1713 gttcgatttccagggggaacaacgattagccagtgcgcatgcctctacgcatgagccaaattagtcgcccacctttggtgggtcgaaaaccggtgcgaaa 1614  T
Q  899 g 899  Q
    |    
T  1613 g 1613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 37; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 815 - 899
Target Start/End: Original strand, 6881 - 6965
Alignment:
Q  815 gaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 899  Q
    |||||||  ||||||| ||||||||| | |||||| ||||||||||||||||  | |||||||| |||| ||||||||| |||||    
T  6881 gaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtcgctcacctttggtgggtcggaaaccggtgcgaaag 6965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 37; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 815 - 899
Target Start/End: Complemental strand, 155794 - 155710
Alignment:
Q  815 gaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 899  Q
    |||||||| ||||| | ||||||||| | |||||||||||||||||||||||  | |||||||| |||| || |||||| |||||    
T  155794 gaacaacgcttggctagtgcgcatgcctctacgcacgagccggattagtcgcccacctttggtgggtcggaagccggtgcgaaag 155710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 36; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 822 - 901
Target Start/End: Complemental strand, 250101 - 250022
Alignment:
Q  822 gtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaagaa 901  Q
    ||||||||| ||||||||| | |||||||||||||||||||||||    |||||||| |||| ||| ||||| |||||||    
T  250101 gtttggccagtgcgcatgcctctacgcacgagccggattagtcgctcgcctttggtgggtcggaaatcggtgcgaaagaa 250022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0384 (Bit Score: 34; Significance: 0.000000002; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 736 - 865
Target Start/End: Original strand, 5919 - 6048
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttccaggagaacaacgtttggccattgcg 835  Q
    |||||||||| ||| | || |||||||| || |||||| ||| | ||||  |||| ||| ||| |||||||||||||| | |||||| ||||||| |||     
T  5919 aaccaagttgcttgggttctagtggcaaggagctcctttcaagggcgtacccggggaatactgggttcgatttccagggggacaacgcttggccagtgca 6018  T
Q  836 catgcatttacgcacgagccggattagtcg 865  Q
    ||||| | |||||| ||| || ||||||||    
T  6019 catgcctctacgcatgagacgaattagtcg 6048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 34; Significance: 0.000000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 751 - 899
Target Start/End: Original strand, 319383 - 319532
Alignment:
Q  751 gctccagtggcaatgaactccttccaaagacgtattcgggaaatgctgagttcgatttcca-ggagaacaacgtttggccattgcgcatgcatttacgca 849  Q
    ||||||||||||| || |||||||||| ||||||| |||| ||| | | ||| |||||| | || |||||||| ||||||| ||||||| | | || |||    
T  319383 gctccagtggcaaggagctccttccaaggacgtatccggggaataccgggtttgatttctagggggaacaacgcttggccagtgcgcatccctctatgca 319482  T
Q  850 cgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 899  Q
     |||| ||||||||||   | |||||||| | || ||||||||| |||||    
T  319483 tgagctggattagtcgtccacctttggtggggcggaaaccggtgcgaaag 319532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 32; Significance: 0.00000003; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 812 - 899
Target Start/End: Complemental strand, 42918 - 42831
Alignment:
Q  812 ggagaacaacgtttggccattgcgcatgcatttacgcacgagccggattagtcgcatatctttggtgtgtcgaaaaccggtgtgaaag 899  Q
    ||||||||| | |||| || ||||||||| | ||| || ||||||||||||||||  | |||||||| |||| ||||||||| |||||    
T  42918 ggagaacaatgcttggtcagtgcgcatgcctctacacatgagccggattagtcgcccacctttggtgggtcggaaaccggtgcgaaag 42831  T

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Target: scaffold0016 (Bit Score: 30; Significance: 0.0000004; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 736 - 785
Target Start/End: Complemental strand, 8873 - 8824
Alignment:
Q  736 aaccaagttgattgagctccagtggcaatgaactccttccaaagacgtat 785  Q
    |||||||||| ||| ||||||||||||| || |||||||||| |||||||    
T  8873 aaccaagttgtttgggctccagtggcaaggagctccttccaaggacgtat 8824  T

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