View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19145_high_13 (Length: 401)
Name: NF19145_high_13
Description: NF19145
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19145_high_13 |
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Alignment Details
Target: chr8 (Bit Score: 363; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 363; E-Value: 0
Query Start/End: Original strand, 19 - 389
Target Start/End: Original strand, 38784716 - 38785086
Alignment:
| Q |
19 |
aagatgcccaacaaaatatcataatttttccgaaacacattcatcaactgtgcatgcaagaaggaaaaattaattaaacataggaaattgaagtgaaaat |
118 |
Q |
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| T |
38784716 |
aagatgcccaacaaaatatcataatttttccgaaacacattcatcaactgtgcatgcaagaaggaaaaattaattaaacatatgaaattgaagtgaaaat |
38784815 |
T |
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| Q |
119 |
tttgattagccaagaacataaagaaaaggtactaatatctttgtaatatacctgatcaggagtgattgtagaattttcaaaattaatgtcaaccctctgt |
218 |
Q |
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| T |
38784816 |
tttgattaggcaagaacataaagaaaaggtactaatatctttgtaatatacctgatcaggagtgattgtagaattttcaaaattaatgtcaaccctctgt |
38784915 |
T |
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| Q |
219 |
gaatttaaagtagaagctaaattagtatttatttggcggcaatatgattgattaactaaaagtaaccaaacaaagaggaggagatttaactgttctggaa |
318 |
Q |
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| T |
38784916 |
gaatttaaagtagaagctaaattagtatttatttggcggcaatatgattgattaactaaaagtaaccaaacaaagaggaggagatttaactgttctggaa |
38785015 |
T |
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| Q |
319 |
gcaatcttgaatgaggcctcaatactaagctctccacacaacaatatcaacccttttgcattgaacttgat |
389 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38785016 |
gcaatcttgaatgaggcctcaatactaagctctccacacaacaatatcaacccttttgcattgaacttgat |
38785086 |
T |
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