View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19145_high_28 (Length: 268)
Name: NF19145_high_28
Description: NF19145
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19145_high_28 |
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Alignment Details
Target: chr7 (Bit Score: 171; Significance: 7e-92; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 171; E-Value: 7e-92
Query Start/End: Original strand, 80 - 254
Target Start/End: Original strand, 33687835 - 33688009
Alignment:
| Q |
80 |
ctaaaactcgtccttgtagtttgtatttgtccctatgttgtacagttgtgtgacaccaatttaccttgaaagtgtttaaaagcatgataataacaaactt |
179 |
Q |
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| T |
33687835 |
ctaaaactcgtccttgtagttggtatttgtccctatgttgtacagttgtgtgacaccaatttaccttgaaagtgtttaaaagcatgataataacaaactt |
33687934 |
T |
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| Q |
180 |
ttgggaaaattttacattttaaactactcacaacatgtttttaaacacttacgtactcacaacatgcagagcaat |
254 |
Q |
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| T |
33687935 |
ttgggaaaattttacattttaaactactcacaacatgtttttaaacacttacgtactcacaacatgcagagcaat |
33688009 |
T |
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