View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19145_high_31 (Length: 260)
Name: NF19145_high_31
Description: NF19145
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19145_high_31 |
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Alignment Details
Target: chr1 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 16 - 242
Target Start/End: Original strand, 28482349 - 28482576
Alignment:
| Q |
16 |
atgtatacataaa-gatcattaactaagcagctatcattgtaaattttcttcctctctaattttaagattaatttttgttcgacttttccatttgtatat |
114 |
Q |
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| T |
28482349 |
atgtatacataaaagatcattaactaagcagctatcatggtaaattttcttcctctctaattttaagattaatttttgttctacttttccatttgtatat |
28482448 |
T |
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| Q |
115 |
atagggtgtggcatcatctgaaataactgaggaactcccaagtggacaacaaagaacaaggcaaaaccttggtatagagacacaaataaaaacacatgaa |
214 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
28482449 |
atagggtgtggcatcatctgaaataactgaggaactcccaagtggacaacaaagaacaaggcaaaaccttggtatagagacacaaataaaaacacatgaa |
28482548 |
T |
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| Q |
215 |
gaaacaaaagaagattttttgagaataa |
242 |
Q |
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|||||||||||||||||||||||||||| |
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| T |
28482549 |
gaaacaaaagaagattttttgagaataa |
28482576 |
T |
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