View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19145_high_40 (Length: 211)
Name: NF19145_high_40
Description: NF19145
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19145_high_40 |
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Alignment Details
Target: chr7 (Bit Score: 168; Significance: 3e-90; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 168; E-Value: 3e-90
Query Start/End: Original strand, 15 - 194
Target Start/End: Complemental strand, 28958450 - 28958271
Alignment:
| Q |
15 |
ataattctgaagaatcttatctgttgaaagtgataatcaattatttgctttttcctcttctaacggttggctcaagagttgttaagttgattgattattt |
114 |
Q |
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| T |
28958450 |
ataattcttaagaatcttatctgttgaaagtgataatcaattatttgctttttcctcttctaacggttggctgaagagttgttaagttgattgattattt |
28958351 |
T |
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| Q |
115 |
ccaaggattcatcatacaaaagttcaactccagtagcaaatgttccaacttccaaccaatacataagtttataatgtggt |
194 |
Q |
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||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
28958350 |
ccaaggattcatcatacaaaaattcaactccagtagcaaatgttccaacttccaaccaatacataagtttataatgtggt |
28958271 |
T |
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