View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19145_low_29 (Length: 279)
Name: NF19145_low_29
Description: NF19145
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19145_low_29 |
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Alignment Details
Target: chr4 (Bit Score: 231; Significance: 1e-127; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 13 - 259
Target Start/End: Complemental strand, 51079041 - 51078795
Alignment:
| Q |
13 |
aatataaggtagagtgtttccctttagattggtaaaggagatgcaaactctaaagcactaacacggacaccagacatagtgacattgataagaattttaa |
112 |
Q |
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| T |
51079041 |
aatataaggtagagtgtttccctttagattggtaaaggagatgcaaactctaaagcactaacacggacaccagacatagtgacattaataagaatttaaa |
51078942 |
T |
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| Q |
113 |
aaaatgaattaattgaatgtaataatgttgttatcgtgtcaatgtcattggtgctacataagatgcaatcaaaagatcaaagaattgaatccaataaaga |
212 |
Q |
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| T |
51078941 |
aaaatgaattaattgaatgtaataatgttgttatcgtgtcaatgtcatcggtgctacataagatgcaatcaaaagatcaaagaattgaatcaaataaaga |
51078842 |
T |
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| Q |
213 |
ggacagtaattgttacatcaacaatcaacatcagactagtatgttaa |
259 |
Q |
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| T |
51078841 |
ggacagtaattgttacatcaacaatcaacatcagactagtatgttaa |
51078795 |
T |
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