View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19145_low_5 (Length: 555)
Name: NF19145_low_5
Description: NF19145
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19145_low_5 |
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Alignment Details
Target: chr7 (Bit Score: 426; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 426; E-Value: 0
Query Start/End: Original strand, 1 - 540
Target Start/End: Complemental strand, 7905702 - 7905164
Alignment:
| Q |
1 |
tatgtctcctgagctttagtgctttggaagcaactggaacatggatatttgtagatcctccccccaatatttctcccattggaagcaaatgggtcttcaa |
100 |
Q |
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| T |
7905702 |
tatgtcccctgagctt-agtgctttggaagcaactggaacatggatatttgtagatcctccccccaatatttctcccattggaagcaaatggatcttca- |
7905605 |
T |
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| Q |
101 |
gattaaacggcatgccaatggttctattgagcgctatagagcacgtcttgtagccaagggttacaatcaaatcgagggcgtggannnnnnnnng-cactc |
199 |
Q |
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| T |
7905604 |
gattaaacggtatgccaatggttctattgagcgctataatgcatgtcttgtagccaagggttacaatcaaatcgaaggcgtggattttttttttacactc |
7905505 |
T |
|
| Q |
200 |
tctctggtggaaaaactgtcaactgtttgattgttgcttgttgttgcttctataaaacgatggcatctccaccaattagacgttaacaacgccttcttgc |
299 |
Q |
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| T |
7905504 |
tctctggtggcaaaactgtcaattgtttgattgttgcttgctgttacttctattaaacgatggcatctccaccaattagacgctaacaacaccttcttgc |
7905405 |
T |
|
| Q |
300 |
acggtgatcttcaagaggatgtctacatgcaccctcctcaaggtgtttctcctcctaggcctgggcaggtttgtaagctgctcaagtccttatacggcct |
399 |
Q |
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| T |
7905404 |
acggtgatcttcaagaggatgtctacatgcaccctcctcaaggtgtttctcctcctaggcctgggcaggtttgtaagctgctcaagtccttatacggcct |
7905305 |
T |
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| Q |
400 |
caaacatgccagccggcgttggtttgaaaagcttatttcactcctcctgaccattggttttgtgcaagcttcagctgatcactcctttttaattcgtgct |
499 |
Q |
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| T |
7905304 |
caaacaagccagccggcgttggtttgaaaagcttatttcactcctcctgaccattggttttgtgcaagcttcagctgatcactcctttttaattcgtgct |
7905205 |
T |
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| Q |
500 |
tctccaacttctttcacagctttattaatatacgtgaatga |
540 |
Q |
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| T |
7905204 |
tctccaacttctttcacagctttattaatatacgtgaatga |
7905164 |
T |
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