View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1914_high_20 (Length: 250)

Name: NF1914_high_20
Description: NF1914
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1914_high_20
NF1914_high_20
[»] chr8 (30 HSPs)
chr8 (8-250)||(3745195-3745437)
chr8 (16-175)||(22548434-22548593)
chr8 (16-175)||(22548880-22549039)
chr8 (16-175)||(10844500-10844659)
chr8 (17-175)||(17103184-17103343)
chr8 (8-191)||(3744732-3744916)
chr8 (16-180)||(34308815-34308979)
chr8 (16-99)||(12827215-12827298)
chr8 (16-99)||(25144874-25144957)
chr8 (16-161)||(25147638-25147783)
chr8 (16-99)||(25148069-25148152)
chr8 (16-194)||(2044160-2044338)
chr8 (16-93)||(22026481-22026558)
chr8 (16-88)||(31283623-31283695)
chr8 (16-156)||(34308383-34308523)
chr8 (16-99)||(27022299-27022382)
chr8 (16-161)||(8080241-8080386)
chr8 (17-161)||(32292500-32292644)
chr8 (16-175)||(12100793-12100951)
chr8 (16-175)||(41658990-41659149)
chr8 (20-193)||(33852125-33852298)
chr8 (16-85)||(27926001-27926070)
chr8 (16-75)||(6464895-6464954)
chr8 (16-99)||(10729647-10729730)
chr8 (16-75)||(28453440-28453499)
chr8 (16-75)||(41913072-41913131)
chr8 (16-74)||(10844985-10845043)
chr8 (16-128)||(27819178-27819290)
chr8 (16-175)||(21315995-21316153)
chr8 (16-78)||(22840512-22840573)
[»] chr3 (38 HSPs)
chr3 (16-175)||(50347848-50348007)
chr3 (16-175)||(13150439-13150598)
chr3 (16-184)||(28561848-28562015)
chr3 (16-161)||(8067382-8067527)
chr3 (16-175)||(27187214-27187374)
chr3 (16-175)||(11179919-11180078)
chr3 (16-99)||(31284237-31284320)
chr3 (16-99)||(32227182-32227265)
chr3 (16-175)||(13149984-13150143)
chr3 (16-99)||(16811483-16811566)
chr3 (16-75)||(25248213-25248272)
chr3 (16-99)||(32227602-32227685)
chr3 (16-175)||(39653266-39653425)
chr3 (16-175)||(53150697-53150856)
chr3 (16-110)||(29224426-29224520)
chr3 (16-161)||(14814051-14814196)
chr3 (16-75)||(25238669-25238728)
chr3 (16-99)||(32386695-32386778)
chr3 (19-161)||(7477296-7477438)
chr3 (16-99)||(14820256-14820339)
chr3 (16-99)||(41472402-41472485)
chr3 (16-81)||(39641039-39641104)
chr3 (16-75)||(2911197-2911256)
chr3 (16-75)||(4067345-4067404)
chr3 (16-99)||(16811027-16811110)
chr3 (16-67)||(25239070-25239121)
chr3 (16-75)||(30529789-30529848)
chr3 (23-98)||(41474106-41474181)
chr3 (17-75)||(37045138-37045196)
chr3 (43-128)||(3899929-3900014)
chr3 (19-75)||(25230233-25230289)
chr3 (19-75)||(25237820-25237876)
chr3 (16-75)||(20885102-20885161)
chr3 (16-75)||(25230690-25230749)
chr3 (16-75)||(25238277-25238336)
chr3 (16-154)||(25802454-25802592)
chr3 (16-161)||(7493983-7494128)
chr3 (16-56)||(32796939-32796979)
[»] chr2 (32 HSPs)
chr2 (16-161)||(8256628-8256773)
chr2 (16-161)||(30966792-30966937)
chr2 (16-99)||(11388289-11388372)
chr2 (16-99)||(41754391-41754474)
chr2 (16-178)||(16379495-16379657)
chr2 (16-175)||(25337882-25338041)
chr2 (16-155)||(30961788-30961927)
chr2 (16-161)||(30963162-30963307)
chr2 (16-92)||(29804784-29804860)
chr2 (16-155)||(13191076-13191215)
chr2 (16-175)||(24818428-24818586)
chr2 (16-175)||(30966336-30966495)
chr2 (16-99)||(33771103-33771186)
chr2 (16-175)||(16379039-16379198)
chr2 (16-99)||(5399778-5399861)
chr2 (16-99)||(11394636-11394718)
chr2 (16-99)||(29259581-29259664)
chr2 (16-214)||(25433902-25434100)
chr2 (16-112)||(30963668-30963764)
chr2 (19-194)||(15639839-15640014)
chr2 (16-75)||(33174605-33174664)
chr2 (16-194)||(1912627-1912804)
chr2 (19-161)||(15620003-15620145)
chr2 (20-91)||(32377685-32377756)
chr2 (16-79)||(38898893-38898956)
chr2 (49-175)||(32377792-32377918)
chr2 (16-75)||(1707143-1707202)
chr2 (16-55)||(18098883-18098922)
chr2 (16-67)||(33175060-33175111)
chr2 (16-93)||(1953257-1953334)
chr2 (62-114)||(18875931-18875983)
chr2 (16-112)||(27882874-27882970)
[»] scaffold0389 (1 HSPs)
scaffold0389 (16-175)||(13418-13577)
[»] chr7 (33 HSPs)
chr7 (16-175)||(28495956-28496115)
chr7 (16-175)||(34405476-34405635)
chr7 (16-161)||(2941656-2941801)
chr7 (16-175)||(7646363-7646522)
chr7 (16-175)||(13125020-13125180)
chr7 (16-175)||(2193358-2193517)
chr7 (16-99)||(2465835-2465918)
chr7 (16-99)||(28495569-28495652)
chr7 (16-99)||(42515646-42515729)
chr7 (16-168)||(2189246-2189398)
chr7 (16-175)||(13122389-13122549)
chr7 (16-99)||(9125061-9125144)
chr7 (17-99)||(2466027-2466109)
chr7 (31-161)||(43776189-43776319)
chr7 (10-99)||(7646511-7646600)
chr7 (16-168)||(18833388-18833540)
chr7 (16-175)||(36422354-36422512)
chr7 (16-98)||(5406550-5406632)
chr7 (16-76)||(6747582-6747642)
chr7 (16-75)||(679918-679977)
chr7 (16-175)||(22529120-22529279)
chr7 (16-75)||(35474106-35474165)
chr7 (16-75)||(42515194-42515253)
chr7 (16-98)||(6719037-6719118)
chr7 (16-75)||(2611637-2611696)
chr7 (16-113)||(1628815-1628912)
chr7 (137-194)||(3305214-3305271)
chr7 (16-175)||(29357341-29357500)
chr7 (61-128)||(37671693-37671760)
chr7 (16-75)||(46425843-46425902)
chr7 (16-70)||(31406574-31406628)
chr7 (19-124)||(25182466-25182571)
chr7 (16-52)||(16192421-16192457)
[»] chr1 (42 HSPs)
chr1 (16-175)||(20054421-20054580)
chr1 (16-175)||(20054877-20055036)
chr1 (16-175)||(20055333-20055492)
chr1 (16-175)||(20055789-20055948)
chr1 (16-175)||(20056245-20056404)
chr1 (16-175)||(20057148-20057307)
chr1 (16-175)||(20057604-20057763)
chr1 (16-175)||(16451818-16451977)
chr1 (16-175)||(16460971-16461130)
chr1 (16-175)||(20056701-20056860)
chr1 (16-175)||(20845546-20845705)
chr1 (16-175)||(52250645-52250804)
chr1 (16-175)||(52250982-52251141)
chr1 (16-161)||(38341008-38341153)
chr1 (16-99)||(20054041-20054124)
chr1 (16-99)||(46693696-46693779)
chr1 (16-99)||(51372835-51372918)
chr1 (16-175)||(52250308-52250467)
chr1 (16-180)||(50002955-50003119)
chr1 (16-99)||(20060301-20060384)
chr1 (16-93)||(35760881-35760958)
chr1 (16-79)||(43057046-43057109)
chr1 (16-91)||(50002254-50002329)
chr1 (16-175)||(50002592-50002751)
chr1 (22-99)||(8278065-8278142)
chr1 (20-161)||(23180836-23180977)
chr1 (16-161)||(35759507-35759652)
chr1 (16-75)||(43057508-43057567)
chr1 (16-196)||(2634568-2634748)
chr1 (13-93)||(31822630-31822710)
chr1 (16-75)||(12728094-12728153)
chr1 (16-113)||(12883626-12883723)
chr1 (16-56)||(2328417-2328457)
chr1 (13-113)||(2739621-2739721)
chr1 (19-114)||(16907339-16907434)
chr1 (16-75)||(30872935-30872994)
chr1 (37-75)||(35009981-35010019)
chr1 (16-113)||(7548193-7548290)
chr1 (16-92)||(2635026-2635102)
chr1 (16-92)||(16440547-16440623)
chr1 (16-56)||(20061195-20061235)
chr1 (16-48)||(31823096-31823128)
[»] chr5 (36 HSPs)
chr5 (16-194)||(29679973-29680151)
chr5 (16-175)||(8391207-8391366)
chr5 (16-175)||(34371714-34371873)
chr5 (16-174)||(1822008-1822166)
chr5 (16-174)||(10927289-10927447)
chr5 (16-99)||(2193918-2194001)
chr5 (16-99)||(2474061-2474144)
chr5 (16-175)||(3886486-3886645)
chr5 (16-175)||(3886942-3887101)
chr5 (16-175)||(8641920-8642078)
chr5 (16-175)||(17445340-17445499)
chr5 (16-99)||(2474507-2474590)
chr5 (16-154)||(42788552-42788690)
chr5 (16-113)||(21886093-21886190)
chr5 (16-125)||(30684491-30684600)
chr5 (16-161)||(34372170-34372315)
chr5 (20-99)||(189174-189253)
chr5 (16-75)||(39147041-39147100)
chr5 (16-161)||(27646734-27646879)
chr5 (16-99)||(15512973-15513056)
chr5 (16-175)||(18304533-18304692)
chr5 (16-199)||(18750057-18750240)
chr5 (16-153)||(24182153-24182289)
chr5 (69-153)||(16370618-16370702)
chr5 (16-175)||(22557071-22557231)
chr5 (16-99)||(11757242-11757325)
chr5 (27-170)||(20039365-20039508)
chr5 (16-91)||(34867892-34867967)
chr5 (16-175)||(22556638-22556798)
chr5 (16-75)||(10926931-10926990)
chr5 (26-112)||(4102908-4102994)
chr5 (33-92)||(5785964-5786023)
chr5 (16-175)||(30719690-30719849)
chr5 (16-86)||(32574632-32574702)
chr5 (16-52)||(4658001-4658037)
chr5 (13-93)||(42429244-42429324)
[»] scaffold0243 (1 HSPs)
scaffold0243 (16-161)||(1322-1467)
[»] scaffold0322 (1 HSPs)
scaffold0322 (19-175)||(19071-19227)
[»] chr6 (34 HSPs)
chr6 (16-175)||(9352164-9352323)
chr6 (16-175)||(13492434-13492594)
chr6 (19-175)||(17027416-17027572)
chr6 (16-99)||(13492891-13492974)
chr6 (16-175)||(20850423-20850582)
chr6 (16-175)||(13191398-13191557)
chr6 (16-99)||(16520070-16520153)
chr6 (16-99)||(20896649-20896732)
chr6 (16-155)||(23986222-23986361)
chr6 (16-99)||(28780212-28780295)
chr6 (16-161)||(7912412-7912557)
chr6 (16-99)||(7911980-7912063)
chr6 (16-75)||(11062387-11062446)
chr6 (16-133)||(9440236-9440353)
chr6 (16-128)||(15929684-15929796)
chr6 (16-175)||(2890724-2890883)
chr6 (16-75)||(17851020-17851079)
chr6 (16-75)||(17851476-17851535)
chr6 (26-161)||(28065735-28065869)
chr6 (13-75)||(6330897-6330959)
chr6 (16-93)||(2681183-2681260)
chr6 (16-113)||(23776543-23776639)
chr6 (16-87)||(17731082-17731153)
chr6 (16-75)||(20126167-20126226)
chr6 (26-156)||(2720467-2720597)
chr6 (13-75)||(20732677-20732739)
chr6 (16-113)||(9440804-9440901)
chr6 (16-81)||(21312073-21312138)
chr6 (19-75)||(21311620-21311676)
chr6 (16-112)||(33774950-33775046)
chr6 (10-56)||(2891297-2891343)
chr6 (27-93)||(17205451-17205517)
chr6 (16-56)||(3652588-3652628)
chr6 (41-153)||(31415995-31416107)
[»] chr4 (44 HSPs)
chr4 (16-168)||(27026605-27026756)
chr4 (16-175)||(23350162-23350321)
chr4 (16-113)||(12691940-12692037)
chr4 (16-196)||(4185817-4185995)
chr4 (16-175)||(23943121-23943280)
chr4 (16-99)||(50814780-50814863)
chr4 (16-161)||(4127782-4127927)
chr4 (16-161)||(49998738-49998883)
chr4 (61-161)||(14572047-14572147)
chr4 (16-99)||(44471280-44471363)
chr4 (16-93)||(15306052-15306129)
chr4 (16-156)||(7678520-7678660)
chr4 (23-99)||(35871736-35871812)
chr4 (38-194)||(44470735-44470891)
chr4 (16-75)||(1645728-1645787)
chr4 (16-99)||(24628932-24629015)
chr4 (16-174)||(1464249-1464406)
chr4 (19-175)||(27578788-27578944)
chr4 (69-173)||(41870073-41870177)
chr4 (16-99)||(24629388-24629471)
chr4 (42-175)||(14571567-14571700)
chr4 (16-156)||(27578355-27578495)
chr4 (16-199)||(14351897-14352080)
chr4 (16-155)||(17628613-17628752)
chr4 (16-99)||(21220286-21220369)
chr4 (16-75)||(23942768-23942827)
chr4 (24-86)||(20306132-20306194)
chr4 (16-93)||(23091472-23091549)
chr4 (16-75)||(3169308-3169367)
chr4 (118-173)||(5810038-5810093)
chr4 (16-71)||(27029379-27029434)
chr4 (26-161)||(27578179-27578314)
chr4 (16-75)||(50398517-50398576)
chr4 (16-75)||(50398972-50399031)
chr4 (66-128)||(26200219-26200281)
chr4 (31-104)||(11828435-11828508)
chr4 (19-75)||(51331260-51331316)
chr4 (19-75)||(53996094-53996150)
chr4 (28-75)||(29628647-29628694)
chr4 (49-175)||(8467692-8467813)
chr4 (16-98)||(33764962-33765044)
chr4 (26-75)||(21067843-21067892)
chr4 (16-56)||(4127435-4127475)
chr4 (16-112)||(13266188-13266284)
[»] scaffold0499 (1 HSPs)
scaffold0499 (16-175)||(1936-2095)
[»] scaffold0022 (3 HSPs)
scaffold0022 (16-174)||(163173-163331)
scaffold0022 (10-161)||(163033-163184)
scaffold0022 (16-175)||(162562-162722)
[»] scaffold0024 (1 HSPs)
scaffold0024 (16-161)||(105822-105967)
[»] scaffold0168 (1 HSPs)
scaffold0168 (16-175)||(2844-3003)
[»] scaffold0020 (1 HSPs)
scaffold0020 (16-175)||(107348-107507)
[»] scaffold0005 (2 HSPs)
scaffold0005 (61-161)||(245229-245329)
scaffold0005 (42-175)||(245676-245809)
[»] scaffold0277 (1 HSPs)
scaffold0277 (16-99)||(14663-14746)
[»] scaffold0002 (1 HSPs)
scaffold0002 (16-175)||(154859-155018)
[»] scaffold0018 (1 HSPs)
scaffold0018 (16-175)||(10402-10560)
[»] scaffold0217 (1 HSPs)
scaffold0217 (25-175)||(421-571)
[»] scaffold0040 (1 HSPs)
scaffold0040 (16-99)||(2171-2254)
[»] scaffold0333 (2 HSPs)
scaffold0333 (16-99)||(5123-5205)
scaffold0333 (16-175)||(4663-4821)
[»] scaffold0557 (1 HSPs)
scaffold0557 (16-73)||(2207-2264)
[»] scaffold1519 (1 HSPs)
scaffold1519 (61-175)||(1586-1700)
[»] scaffold0047 (2 HSPs)
scaffold0047 (20-161)||(17497-17638)
scaffold0047 (16-75)||(18120-18178)
[»] scaffold0137 (1 HSPs)
scaffold0137 (42-128)||(7070-7156)


Alignment Details
Target: chr8 (Bit Score: 215; Significance: 1e-118; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 8 - 250
Target Start/End: Original strand, 3745195 - 3745437
Alignment:
Q  8 ccaagaatatgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgaga 107  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3745195 ccaacaatatgcatcttctttttggtagcccattccataataactccacagtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgaga 3745294  T
Q  108 agtttctcaaaaagcgtgtgaatgataataaaacacgctgaaaagactcatgtttatttgttgggtcattcagtaatacttaaagtcatatgtgatctta 207  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||    
T  3745295 agtttctcaaaaagcgtgtgaatgataataaaacatgctgaaaagactcatgttgatttgttgggtcattcagtaatacttaaagtcgtatgtgatctta 3745394  T
Q  208 aagttttggttttcaaaaattgttctatgatgtcaaatatttt 250  Q
    |||||||||||||||||||||||||||| || |||||||||||    
T  3745395 aagttttggttttcaaaaattgttctattatatcaaatatttt 3745437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 16 - 175
Target Start/End: Complemental strand, 22548593 - 22548434
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctc 115  Q
    |||||||||||||| |||||| ||||||||||||||||||| || ||||||||||||||| ||||||||||||||||| |||||  | | |||||||| |    
T  22548593 atgcatcttcttttcggtagctcattccataataactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttccc 22548494  T
Q  116 aaaaagcgtgtgaatgataataaaacacgctgaaaagactcatgtttatttgttgggtca 175  Q
    |  ||||||| || |||  | |||||||||||||||||||| ||||  ||||| ||||||    
T  22548493 agtaagcgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtca 22548434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 16 - 175
Target Start/End: Complemental strand, 22549039 - 22548880
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctc 115  Q
    |||||||||||||| |||||| |||||||||| |||||||| || ||||||||||||||| ||||||||||||||||| |||||  | | |||||||| |    
T  22549039 atgcatcttcttttcggtagctcattccataaaaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttccc 22548940  T
Q  116 aaaaagcgtgtgaatgataataaaacacgctgaaaagactcatgtttatttgttgggtca 175  Q
    |  ||||||| || |||  ||||||||||||||| |||||| ||||  ||||| ||||||    
T  22548939 agtaagcgtgcgagtgaggataaaacacgctgaacagactcgtgttggtttgtggggtca 22548880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 16 - 175
Target Start/End: Complemental strand, 10844659 - 10844500
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctc 115  Q
    |||||||||||||| |||||| |||||||||| |||||||| || |||||||||||||||  |||||||||||||||| |||||  | | ||||||||||    
T  10844659 atgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttgaagcaattttgggatgggtgacctaccgggaagtttctc 10844560  T
Q  116 aaaaagcgtgtgaatgataataaaacacgctgaaaagactcatgtttatttgttgggtca 175  Q
       |||| || || |||  | |||||||||||||||||||| ||||| ||||| ||||||    
T  10844559 ggtaagcatgcgagtgaggacaaaacacgctgaaaagactcgtgtttgtttgtagggtca 10844500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 17 - 175
Target Start/End: Original strand, 17103184 - 17103343
Alignment:
Q  17 tgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggat-ggctgaccatctgagaagtttctc 115  Q
    ||||||||||||| |||||| |||||||||| ||||||||||| ||||||||||||||| ||||||||||||||| || |||||  | | |||||||| |    
T  17103184 tgcatcttcttttcggtagctcattccataagaactccacggttaagcgtgcttgacttggagcaattttgggatgggttgacctaccgggaagtttccc 17103283  T
Q  116 aaaaagcgtgtgaatgataataaaacacgctgaaaagactcatgtttatttgttgggtca 175  Q
       ||||||| || |||  | |||||||||||||||||||| ||||  ||||| ||||||    
T  17103284 ggtaagcgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtca 17103343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 8 - 191
Target Start/End: Original strand, 3744732 - 3744916
Alignment:
Q  8 ccaagaatatgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgaga 107  Q
    |||| |||||||| ||||||||||||||| |||| ||||| ||||| ||  | |||| |  || |||| ||||||||||||||| | |||| || |||||    
T  3744732 ccaacaatatgcaccttctttttggtagcacatttcataagaactctacaattaagctttattaactttgagcaattttgggattggtgactatttgaga 3744831  T
Q  108 agtttctcaaaaagcgtgtgaatgataataaaacacgctgaaaagactcatgtttatttgt-tgggtcattcagtaatacttaaa 191  Q
    ||||||||| |||| |||| ||||| || ||||||| |||||||||||| ||||  |||||  |||||| || ||||||||||||    
T  3744832 agtttctcagaaagtgtgttaatgagaacaaaacacactgaaaagactcgtgttggtttgtgggggtcaatctgtaatacttaaa 3744916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 16 - 180
Target Start/End: Complemental strand, 34308979 - 34308815
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctc 115  Q
    |||||||||||||| ||||||| ||||||||| |||||||| || ||||||||||| ||| ||||||||||| ||||| |||||  | | |||||||| |    
T  34308979 atgcatcttcttttcggtagcctattccataagaactccacagttaagcgtgcttggcttggagcaattttgagatgggtgacctaccgggaagtttccc 34308880  T
Q  116 aaaaagcgtgtgaatgataataaaacacgctgaaaagactcatgtttatttgttgggtcattcag 180  Q
       |||| ||||| |||  | |||||||||||||||||||| ||||  ||||| |||||| ||||    
T  34308879 ggtaagcatgtgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcag 34308815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 99
Target Start/End: Complemental strand, 12827298 - 12827215
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgacc 99  Q
    |||||||||||||| |||||| |||||||||| |||||||| || ||||||||||||||| ||||||||||||||||| |||||    
T  12827298 atgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacc 12827215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 99
Target Start/End: Original strand, 25144874 - 25144957
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgacc 99  Q
    |||||||||||||| |||||| |||||||||| |||||||| || ||||||||||||||| ||||||||||||||||| |||||    
T  25144874 atgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacc 25144957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 161
Target Start/End: Original strand, 25147638 - 25147783
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctc 115  Q
    |||||||||||||| |||||| |||||||||| |||||||  || || |||||||||||| ||||||||||||||||| |||||  | | ||||||||      
T  25147638 atgcatcttcttttcggtagctcattccataagaactccatagttaatcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcct 25147737  T
Q  116 aaaaagcgtgtgaatgataataaaacacgctgaaaagactcatgtt 161  Q
     | ||||||| || |||  | |||||||||||||||||||| ||||    
T  25147738 gataagcgtgcgagtgagtacaaaacacgctgaaaagactcgtgtt 25147783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 16 - 99
Target Start/End: Original strand, 25148069 - 25148152
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgacc 99  Q
    |||||| ||||||| |||||| |||||||||| |||||||| || ||||||||||||||| ||||||||||||||||| |||||    
T  25148069 atgcatattcttttcggtagctcattccataagaactccacagttaagcgtgcttgactttgagcaattttgggatgggtgacc 25148152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 16 - 194
Target Start/End: Original strand, 2044160 - 2044338
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctc 115  Q
    |||||| |||||||||||||||||||||||||||||||||| || ||||||||||||||| ||| | | || |||||| |||||   || |||||||  |    
T  2044160 atgcattttctttttggtagcccattccataataactccacagttaagcgtgcttgacttggagtagtctttggatgggtgacctaatgggaagttttcc 2044259  T
Q  116 aaaaagcgtgtgaatgataataaaacacgctgaaaagactcatgtttatttgttgggtcattcagtaatacttaaagtc 194  Q
       ||||||| || |||  | |||||||||||||||||||| | ||  ||||| |||||| |||  ||| |||||||||    
T  2044260 ggtaagcgtgcgagtgaggacaaaacacgctgaaaagactcgtattggtttgtagggtcagtcaccaatgcttaaagtc 2044338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 93
Target Start/End: Original strand, 22026481 - 22026558
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatgg 93  Q
    |||||||||||||| |||||| |||||||||| |||||||| || ||||||||||||||| ||||||| |||||||||    
T  22026481 atgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaatattgggatgg 22026558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 88
Target Start/End: Complemental strand, 31283695 - 31283623
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgg 88  Q
    |||||||||||||| ||||||||||||||||| |||||||| || ||| ||||||||||| ||||||||||||    
T  31283695 atgcatcttcttttcggtagcccattccataagaactccacagttaagtgtgcttgactttgagcaattttgg 31283623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 156
Target Start/End: Complemental strand, 34308523 - 34308383
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctc 115  Q
    |||||||||||||| ||||||| ||||||||| ||||||||  | ||||||||||| ||| ||||||||||| ||||| |||||  | | |||||||| |    
T  34308523 atgcatcttcttttcggtagcctattccataagaactccacacttaagcgtgcttggcttggagcaattttgagatgggtgacctaccgggaagtttccc 34308424  T
Q  116 aaaaagcgtgtgaatgataataaaacacgctgaaaagactc 156  Q
       |||| ||||| |||  | ||||||||||||||||||||    
T  34308423 ggtaagcatgtgagtgaggacaaaacacgctgaaaagactc 34308383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 99
Target Start/End: Complemental strand, 27022382 - 27022299
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgacc 99  Q
    ||||||||| |||| || ||| |||||||||| |||||||| || ||||||||||||||| ||||||||||||||||| |||||    
T  27022382 atgcatcttattttcggcagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacc 27022299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 16 - 161
Target Start/End: Complemental strand, 8080386 - 8080241
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctc 115  Q
    |||||| ||||||||||||||||||||||||| |||| ||| || ||||||||||||||| ||| | | || |||||| | |||  ||  ||||||||||    
T  8080386 atgcattttctttttggtagcccattccataagaacttcacagttaagcgtgcttgacttggagtagtctttggatgggtaacctactaggaagtttctc 8080287  T
Q  116 aaaaagcgtgtgaatgataataaaacacgctgaaaagactcatgtt 161  Q
       ||||||| || |||  | |||||||||||||||||||| ||||    
T  8080286 ggtaagcgtgcgagtgaggacaaaacacgctgaaaagactcgtgtt 8080241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 17 - 161
Target Start/End: Original strand, 32292500 - 32292644
Alignment:
Q  17 tgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctca 116  Q
    ||||||||||||||| ||||||||||||||| |||||||| || ||||||||||||||| ||| | | || |||||| ||| |  | | |||||||  |     
T  32292500 tgcatcttctttttgctagcccattccataagaactccacagttaagcgtgcttgacttggagtagtctttggatgggtgatctaccgggaagttttccg 32292599  T
Q  117 aaaagcgtgtgaatgataataaaacacgctgaaaagactcatgtt 161  Q
      |||||||||| |||  | |||||||||||||||||||| ||||    
T  32292600 gtaagcgtgtgagtgaggacaaaacacgctgaaaagactcgtgtt 32292644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 175
Target Start/End: Original strand, 12100793 - 12100951
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctc 115  Q
    |||||||||||||| |||||| |||| ||||| |||| ||| || ||||||||||||||| |||||||||| |||||| |||||  | | ||||||||      
T  12100793 atgcatcttcttttcggtagctcatttcataagaacttcacagttaagcgtgcttgacttggagcaatttt-ggatgggtgacctaccgggaagtttcct 12100891  T
Q  116 aaaaagcgtgtgaatgataataaaacacgctgaaaagactcatgtttatttgttgggtca 175  Q
       ||||||| || |||  | |||||||||||||||||||| ||||  ||||| ||||||    
T  12100892 cgtaagcgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtca 12100951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 175
Target Start/End: Complemental strand, 41659149 - 41658990
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctc 115  Q
    |||||||||||||| | |||| |||| ||||| |||||||| || ||||||| ||||||| ||||||||||||||| | |||||  | | |||||||| |    
T  41659149 atgcatcttcttttcgatagctcattacataagaactccacagttaagcgtgtttgacttggagcaattttgggataggtgacctaccgggaagtttccc 41659050  T
Q  116 aaaaagcgtgtgaatgataataaaacacgctgaaaagactcatgtttatttgttgggtca 175  Q
       ||| ||| || |||  | |||||||||||||||||||| ||||  ||||| ||||||    
T  41659049 tgtaagtgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtca 41658990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 193
Target Start/End: Complemental strand, 33852298 - 33852125
Alignment:
Q  20 atcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgacc-atctgagaagtttctcaaa 118  Q
    |||||||||||||||||||||||||||| |||| |||  | ||||||||||||||| ||| | | || |||||| ||||| ||| || |||||||   |     
T  33852298 atcttctttttggtagcccattccataagaacttcacaattaagcgtgcttgacttggagtagtctttggatgggtgacctatcgga-aagtttcatgat 33852200  T
Q  119 aagcgtgtgaatgataataaaacacgctgaaaagactcatgtttatttgttgggtcattcagtaatacttaaagt 193  Q
    ||||||| || |||  | |||||||||| |||||||||||||| ||||||  |||||  ||| ||| ||||||||    
T  33852199 aagcgtgcgagtgaggacaaaacacgctaaaaagactcatgttgatttgtcaggtcagacagcaatgcttaaagt 33852125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 27926001 - 27926070
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattt 85  Q
    |||||||||||||| |||||| |||| ||||| |||||||| || ||||||||||||||| |||||||||    
T  27926001 atgcatcttcttttcggtagctcatttcataagaactccacagttaagcgtgcttgacttggagcaattt 27926070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 75
Target Start/End: Complemental strand, 6464954 - 6464895
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgactt 75  Q
    |||||| |||||||||||||| |||||||||| |||||||| || |||||||||||||||    
T  6464954 atgcattttctttttggtagctcattccataacaactccacagttaagcgtgcttgactt 6464895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 99
Target Start/End: Complemental strand, 10729730 - 10729647
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgacc 99  Q
    |||||||||||||||||||||| |||||||||  |||||||  | ||| ||||||| |||  ||||||||||||||| ||||||    
T  10729730 atgcatcttctttttggtagcctattccataaggactccacaattaagggtgcttggcttgaagcaattttgggatgactgacc 10729647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 75
Target Start/End: Original strand, 28453440 - 28453499
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgactt 75  Q
    ||||||||||||| |||||||||||||||||| ||||| || || |||||||||||||||    
T  28453440 atgcatcttctttatggtagcccattccataagaactctacagttaagcgtgcttgactt 28453499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 75
Target Start/End: Original strand, 41913072 - 41913131
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgactt 75  Q
    |||| ||||||||||||||||||||||||||| |||||| | || |||||||||||||||    
T  41913072 atgcgtcttctttttggtagcccattccataagaactccgcagttaagcgtgcttgactt 41913131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 10844985 - 10845043
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgact 74  Q
    |||||||||||||| |||||| |||||||||| |||||||| || ||||||||||||||    
T  10844985 atgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgact 10845043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 128
Target Start/End: Complemental strand, 27819290 - 27819178
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctc 115  Q
    ||||||||||||||   |||| |||||||||| |||||||| || ||| ||| ||||||| ||| | | || |||||| ||||| ||||| ||||||  |    
T  27819290 atgcatcttcttttcaatagctcattccataaaaactccacagttaagtgtgtttgactttgagtagtatttggatgggtgaccttctgataagttttcc 27819191  T
Q  116 aaaaagcgtgtga 128  Q
    | |||||||||||    
T  27819190 agaaagcgtgtga 27819178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 175
Target Start/End: Complemental strand, 21316153 - 21315995
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctc 115  Q
    ||||||| ||||||  ||||| |||| ||||| |||||||| || ||| ||||||||||| ||| |||||||| | || |||||  | | |||||||| |    
T  21316153 atgcatcgtcttttcagtagctcatttcataagaactccacagttaagtgtgcttgacttggagtaattttggtaagggtgacctaccgcgaagtttc-c 21316055  T
Q  116 aaaaagcgtgtgaatgataataaaacacgctgaaaagactcatgtttatttgttgggtca 175  Q
       ||||||| || |||  | |||||||||||||||||||| ||||  ||||| ||||||    
T  21316054 ggtaagcgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtca 21315995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 78
Target Start/End: Complemental strand, 22840573 - 22840512
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttaga 78  Q
    |||||||||||||||| |||| |||||||||| |||||||| || || | |||||||||||||    
T  22840573 atgcatcttctttttgttagctcattccataagaactccacagt-aatcatgcttgacttaga 22840512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 72; Significance: 7e-33; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 16 - 175
Target Start/End: Original strand, 50347848 - 50348007
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctc 115  Q
    ||||||||||||||||||||| |||||||||| |||||||| || ||||||||||||||| ||||||||||||||||| |||||  | |||||||||| |    
T  50347848 atgcatcttctttttggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgagaagtttccc 50347947  T
Q  116 aaaaagcgtgtgaatgataataaaacacgctgaaaagactcatgtttatttgttgggtca 175  Q
     | ||| ||| || |||  | |||||||||||||||||||| ||||  ||||| ||||||    
T  50347948 gataagtgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtca 50348007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 16 - 175
Target Start/End: Complemental strand, 13150598 - 13150439
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctc 115  Q
    |||||||||||||| |||||| |||||||||| |||||||| || ||||||||||||||| ||||||||||||||||| |||||  | | |||||||| |    
T  13150598 atgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttccc 13150499  T
Q  116 aaaaagcgtgtgaatgataataaaacacgctgaaaagactcatgtttatttgttgggtca 175  Q
       ||| ||| || |||  | |||||||||||||||||||| |||| |||||| ||||||    
T  13150498 ggtaagtgtgcgagtgaggacaaaacacgctgaaaagactcgtgttgatttgtggggtca 13150439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 16 - 184
Target Start/End: Original strand, 28561848 - 28562015
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctc 115  Q
    |||||||||||||| |||||| |||||||||| |||||||| || ||||||||||||||| ||||||||||||||||| |||||  | | |||||||| |    
T  28561848 atgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgg-tgacctacggggaagtttccc 28561946  T
Q  116 aaaaagcgtgtgaatgataataaaacacgctgaaaagactcatgtttatttgttgggtcattcagtaat 184  Q
       ||||||| || |||  | |||||||||||||||||||| ||||  ||||| |||||| || |||||    
T  28561947 ggtaagcgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggtaat 28562015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 161
Target Start/End: Original strand, 8067382 - 8067527
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctc 115  Q
    ||||||||| |||| |||||| |||||||||| |||||||  || ||||||||||||||| ||||||||||||||||| |||||  | | |||||||| |    
T  8067382 atgcatctttttttcggtagctcattccataagaactccatagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttccc 8067481  T
Q  116 aaaaagcgtgtgaatgataataaaacacgctgaaaagactcatgtt 161  Q
     | ||||||| || |||  | |||||||||||||||||||| ||||    
T  8067482 gataagcgtgcgagtgaggacaaaacacgctgaaaagactcgtgtt 8067527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 16 - 175
Target Start/End: Complemental strand, 27187374 - 27187214
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctc 115  Q
    |||||||||||||| |||||| |||| ||||| |||||||| || ||||||||||||||| ||||||||||||||||| |||||  | | |||||||| |    
T  27187374 atgcatcttcttttcggtagctcatttcataagaactccacagttaagcgtgcttgactttgagcaattttgggatgggtgacctaccgggaagtttccc 27187275  T
Q  116 aaaaagcgtgtgaatga-taataaaacacgctgaaaagactcatgtttatttgttgggtca 175  Q
     | ||||||| || |||  |  |||||||||||||||||||| ||||  ||||| ||||||    
T  27187274 gataagcgtgcgagtgaggacaaaaacacgctgaaaagactcgtgttggtttgtggggtca 27187214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 175
Target Start/End: Complemental strand, 11180078 - 11179919
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctc 115  Q
    |||||||||||||| |||||| |||| ||||| |||||||| || ||||||||||||||| ||||||||||||||||| |||||  | | || ||||| |    
T  11180078 atgcatcttcttttcggtagctcatttcataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggatgtttccc 11179979  T
Q  116 aaaaagcgtgtgaatgataataaaacacgctgaaaagactcatgtttatttgttgggtca 175  Q
       ||| |||||| |||  | |||||||||||||||||||| ||||  ||||| ||||||    
T  11179978 ggtaagtgtgtgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtca 11179919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 99
Target Start/End: Complemental strand, 31284320 - 31284237
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgacc 99  Q
    |||||||||||||| |||||| |||||||||| |||||||| || ||||||||||||||| ||||||||||||||||| |||||    
T  31284320 atgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacc 31284237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 99
Target Start/End: Complemental strand, 32227265 - 32227182
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgacc 99  Q
    ||||||||||||||||||||| |||| ||||| |||||||| || ||||||||||||||| ||||||||||||||||| |||||    
T  32227265 atgcatcttctttttggtagctcatttcataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacc 32227182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 16 - 175
Target Start/End: Complemental strand, 13150143 - 13149984
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctc 115  Q
    ||||||||||||||  ||||| |||||||||| |||||||| || ||||||||||||||| |||||||||||| |||| |||||  | | ||||||||||    
T  13150143 atgcatcttcttttcagtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttggaatgggtgacctaccgggaagtttctc 13150044  T
Q  116 aaaaagcgtgtgaatgataataaaacacgctgaaaagactcatgtttatttgttgggtca 175  Q
       ||| |||  | |||  | |||||||||||||||||||| ||||  ||||| ||||||    
T  13150043 ggtaagtgtgcaagtgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtca 13149984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 16 - 99
Target Start/End: Original strand, 16811483 - 16811566
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgacc 99  Q
    |||||||||||||| |||||| |||||||||| || ||||| || ||||||||||||||| ||||||||||||||||| |||||    
T  16811483 atgcatcttcttttcggtagctcattccataagaattccacagttaagcgtgcttgacttggagcaattttgggatgggtgacc 16811566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 16 - 75
Target Start/End: Original strand, 25248213 - 25248272
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgactt 75  Q
    ||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  25248213 atgcatcttctttttggtagcccattccataataactccacggttcagcgtgcttgactt 25248272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 16 - 99
Target Start/End: Original strand, 32227602 - 32227685
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgacc 99  Q
    |||||||||||||| |||||| |||| ||||| |||||||| || ||||||||||||||| ||||||||||||||||| |||||    
T  32227602 atgcatcttcttttcggtagctcatttcataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacc 32227685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 16 - 175
Target Start/End: Original strand, 39653266 - 39653425
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctc 115  Q
    |||||||||||||| |||||| |||||||| | |||||||| || ||| ||||||||||| ||||||||||||||||| |||||  | | |||||||| |    
T  39653266 atgcatcttcttttcggtagctcattccatgagaactccacagttaagtgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttccc 39653365  T
Q  116 aaaaagcgtgtgaatgataataaaacacgctgaaaagactcatgtttatttgttgggtca 175  Q
       ||| ||| || |||  | |||||||||||||||||||| ||||  ||||| ||||||    
T  39653366 ggtaagtgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtca 39653425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 16 - 175
Target Start/End: Complemental strand, 53150856 - 53150697
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctc 115  Q
    |||||| || |||| ||||||| ||| ||||| |||| ||| || || ||||||| |||| ||||||||||||||||| ||||| | ||||||||||| |    
T  53150856 atgcatatttttttcggtagccaatttcataagaacttcacagttaaccgtgcttaacttggagcaattttgggatgggtgaccttatgagaagtttccc 53150757  T
Q  116 aaaaagcgtgtgaatgataataaaacacgctgaaaagactcatgtttatttgttgggtca 175  Q
    |||||||| | || |||  | |||||| | ||||||||||||||||  ||||| ||||||    
T  53150756 aaaaagcgggcgagtgaggacaaaacatgttgaaaagactcatgttagtttgtggggtca 53150697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 16 - 110
Target Start/End: Original strand, 29224426 - 29224520
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagt 110  Q
    |||||||||||||| |||||||||  |||||| |||| |||  | ||||||||||||||| ||||||||||||||||| ||||| ||||||||||    
T  29224426 atgcatcttcttttcggtagcccaaaccataagaacttcacaattaagcgtgcttgacttggagcaattttgggatgggtgaccttctgagaagt 29224520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 161
Target Start/End: Original strand, 14814051 - 14814196
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctc 115  Q
    |||||||||||||| |||||| | |||||||| |||||||| || ||||||||||||||| ||||||||||| ||||| |||||  | || | ||||| |    
T  14814051 atgcatcttcttttcggtagctcgttccataagaactccacagttaagcgtgcttgacttggagcaattttgtgatgggtgacctaccgaaaggtttccc 14814150  T
Q  116 aaaaagcgtgtgaatgataataaaacacgctgaaaagactcatgtt 161  Q
       ||||||| || |||  | |||||||||||||||||||| ||||    
T  14814151 ggtaagcgtgcgagtgaagacaaaacacgctgaaaagactcgtgtt 14814196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 75
Target Start/End: Complemental strand, 25238728 - 25238669
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgactt 75  Q
    |||||||||||||||||||||||||||||||| |||||||| || |||||||||||||||    
T  25238728 atgcatcttctttttggtagcccattccataagaactccacagttaagcgtgcttgactt 25238669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 99
Target Start/End: Complemental strand, 32386778 - 32386695
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgacc 99  Q
    ||||||||||||||  |||||  ||||||||| |||||||| || ||||||||||||||| ||||||||||||||||| |||||    
T  32386778 atgcatcttcttttcagtagctaattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacc 32386695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 19 - 161
Target Start/End: Original strand, 7477296 - 7477438
Alignment:
Q  19 catcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctcaaa 118  Q
    ||||||||||| |||||||||  |||||| ||||||||  | |||| |||||||||||||| | | || |||||||||||| | || ||| ||||||  |    
T  7477296 catcttcttttcggtagcccaaaccataagaactccacatttaagcatgcttgacttagagtagtcttaggatggctgaccttatgggaaatttctcgga 7477395  T
Q  119 aagcgtgtgaatgataataaaacacgctgaaaagactcatgtt 161  Q
    ||||||| || ||| || ||| |||| ||||||||||||||||    
T  7477396 aagcgtgcgagtgagaacaaagcacgttgaaaagactcatgtt 7477438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 99
Target Start/End: Original strand, 14820256 - 14820339
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgacc 99  Q
    ||||||||| |||| |||||| | |||||||| |||||||| || ||||||||||||||| || |||||||||||||| |||||    
T  14820256 atgcatcttattttcggtagctcgttccataagaactccacagttaagcgtgcttgacttggaacaattttgggatgggtgacc 14820339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 99
Target Start/End: Original strand, 41472402 - 41472485
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgacc 99  Q
    |||||||||||||| |||||  |||||||||| ||||||||||| || ||||||||||||  | |||||||||||||| |||||    
T  41472402 atgcatcttcttttcggtagatcattccataagaactccacggttaaacgtgcttgacttgaaacaattttgggatgggtgacc 41472485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 81
Target Start/End: Original strand, 39641039 - 39641104
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagca 81  Q
    ||||||||||||||||||||| |||||||||| |||||||| || ||||||| ||||||| |||||    
T  39641039 atgcatcttctttttggtagctcattccataagaactccacagttaagcgtgtttgacttggagca 39641104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 75
Target Start/End: Original strand, 2911197 - 2911256
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgactt 75  Q
    |||||| |||||||||||||| |||||||||| |||||||| || |||||||||||||||    
T  2911197 atgcatattctttttggtagctcattccataagaactccacagttaagcgtgcttgactt 2911256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 75
Target Start/End: Complemental strand, 4067404 - 4067345
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgactt 75  Q
    ||||||||||||||||||||| |||| ||||| |||||||| || |||||||||||||||    
T  4067404 atgcatcttctttttggtagctcattacataagaactccacagttaagcgtgcttgactt 4067345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 99
Target Start/End: Original strand, 16811027 - 16811110
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgacc 99  Q
    |||||||||||||| |||||| |||||||||| |||| |||  | ||| |||||||||||  |||||||||||||||| |||||    
T  16811027 atgcatcttcttttcggtagctcattccataagaacttcacatttaagtgtgcttgacttgtagcaattttgggatgggtgacc 16811110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 67
Target Start/End: Complemental strand, 25239121 - 25239070
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtg 67  Q
    |||||||||||||||||||||||||||||||| |||||||| || |||||||    
T  25239121 atgcatcttctttttggtagcccattccataagaactccacagttaagcgtg 25239070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 75
Target Start/End: Original strand, 30529789 - 30529848
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgactt 75  Q
    |||||||||||||||||||||||||||||||| |||| ||  || |||||||||||||||    
T  30529789 atgcatcttctttttggtagcccattccataagaacttcatagttaagcgtgcttgactt 30529848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 23 - 98
Target Start/End: Original strand, 41474106 - 41474181
Alignment:
Q  23 ttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgac 98  Q
    ||||||||||| |  ||||| |||| |||||||| |||||||||||||||||| || |||||||||||||| ||||    
T  41474106 ttctttttggtggatcattctataaaaactccacagtcaagcgtgcttgacttggaacaattttgggatgggtgac 41474181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 17 - 75
Target Start/End: Original strand, 37045138 - 37045196
Alignment:
Q  17 tgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgactt 75  Q
    |||||||||||||||||| || ||||||||| |||||||| || |||||||||||||||    
T  37045138 tgcatcttctttttggtaccctattccataagaactccacagttaagcgtgcttgactt 37045196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 43 - 128
Target Start/End: Original strand, 3899929 - 3900014
Alignment:
Q  43 cataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctcaaaaagcgtgtga 128  Q
    ||||| ||||||||  | |||| |||||||||| |||||||||||| |||| ||||| ||||  ||||||| ||||||||||||||    
T  3899929 cataagaactccacaataaagcatgcttgacttggagcaattttggtatgggtgaccttctggaaagtttcccaaaaagcgtgtga 3900014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 75
Target Start/End: Complemental strand, 25230289 - 25230233
Alignment:
Q  19 catcttctttttggtagcccattccataataactccacggtcaagcgtgcttgactt 75  Q
    |||||||||||||||||||||||| |||| |||||||| || | |||||||||||||    
T  25230289 catcttctttttggtagcccattcaataagaactccacagttatgcgtgcttgactt 25230233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 75
Target Start/End: Complemental strand, 25237876 - 25237820
Alignment:
Q  19 catcttctttttggtagcccattccataataactccacggtcaagcgtgcttgactt 75  Q
    |||||||||||||||||||||||| |||| |||||||| || | |||||||||||||    
T  25237876 catcttctttttggtagcccattcaataagaactccacagttatgcgtgcttgactt 25237820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 75
Target Start/End: Complemental strand, 20885161 - 20885102
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgactt 75  Q
    ||||||||||||||| ||||| |||||||||| ||||||||  | |||||||||||||||    
T  20885161 atgcatcttctttttagtagcacattccataagaactccacaattaagcgtgcttgactt 20885102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 75
Target Start/End: Complemental strand, 25230749 - 25230690
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgactt 75  Q
    |||||| ||||||||||||||||||||||||| ||||| ||  | |||||||||||||||    
T  25230749 atgcattttctttttggtagcccattccataagaactcaacaattaagcgtgcttgactt 25230690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 75
Target Start/End: Complemental strand, 25238336 - 25238277
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgactt 75  Q
    |||||| ||||||||||||||||||||||||| ||||| ||  | |||||||||||||||    
T  25238336 atgcattttctttttggtagcccattccataagaactcaacaattaagcgtgcttgactt 25238277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 16 - 154
Target Start/End: Complemental strand, 25802592 - 25802454
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctc 115  Q
    |||||||||||||| | ||||||||||||||| || ||||| || ||||||| ||||||| ||| | | || ||| || ||||| |||  ||||||||||    
T  25802592 atgcatcttcttttcgatagcccattccataagaaatccacagttaagcgtgtttgacttggagtagtcttaggacgggtgaccttctaggaagtttctc 25802493  T
Q  116 aaaaagcgtgtgaatgataataaaacacgctgaaaagac 154  Q
     ||||| ||| || | |    ||||||||||||||||||    
T  25802492 gaaaagagtgcgagtaaggtcaaaacacgctgaaaagac 25802454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 161
Target Start/End: Original strand, 7493983 - 7494128
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctc 115  Q
    |||||||||||||| |||||||||  |||||| ||||||||  | |||| |||||||||| |||   | || | |||||||||| |||  ||| |||| |    
T  7493983 atgcatcttcttttcggtagcccaaaccataagaactccacatttaagcatgcttgacttggagttgtcttagcatggctgaccttctaggaaatttccc 7494082  T
Q  116 aaaaagcgtgtgaatgataataaaacacgctgaaaagactcatgtt 161  Q
      |||||||| || ||| || ||| |||| ||||||||||||||||    
T  7494083 gtaaagcgtgcgagtgagaacaaagcacgttgaaaagactcatgtt 7494128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 56
Target Start/End: Complemental strand, 32796979 - 32796939
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccac 56  Q
    ||||||||||||||| ||||| |||||||||| ||||||||    
T  32796979 atgcatcttcttttttgtagcacattccataagaactccac 32796939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 66; Significance: 3e-29; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 16 - 161
Target Start/End: Original strand, 8256628 - 8256773
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctc 115  Q
    |||||||||||||| |||||| |||||||||| |||||||| || ||||||||||||||| ||||||||||||||||| |||||  ||| |||||||  |    
T  8256628 atgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctgctgggaagttttcc 8256727  T
Q  116 aaaaagcgtgtgaatgataataaaacacgctgaaaagactcatgtt 161  Q
     | ||||||| || |||  | |||| ||||||||||||||||||||    
T  8256728 gataagcgtgcgagtgaggacaaaatacgctgaaaagactcatgtt 8256773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 161
Target Start/End: Original strand, 30966792 - 30966937
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctc 115  Q
    |||||||||||||| |||||| |||||||||| |||||||| || |||||||||| |||| ||||||||||||||||| |||||  | | ||||||||||    
T  30966792 atgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttaacttggagcaattttgggatgggtgacctaccgggaagtttctc 30966891  T
Q  116 aaaaagcgtgtgaatgataataaaacacgctgaaaagactcatgtt 161  Q
       ||||||| || |||  | |||||||| ||||||||||| ||||    
T  30966892 ggtaagcgtgcgagtgaggacaaaacacgttgaaaagactcgtgtt 30966937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 99
Target Start/End: Original strand, 11388289 - 11388372
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgacc 99  Q
    |||||||||||||| |||||| |||||||||| |||||||| || ||||||||||||||| ||||||||||||||||| |||||    
T  11388289 atgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacc 11388372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 99
Target Start/End: Original strand, 41754391 - 41754474
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgacc 99  Q
    |||||||||||||| |||||| |||||||||| |||||||| || ||||||||||||||| ||||||||||||||||| |||||    
T  41754391 atgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatggatgacc 41754474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 178
Target Start/End: Original strand, 16379495 - 16379657
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctc 115  Q
    ||||||||||||||||||||| |||||||||| |||||||| || ||||||| ||||||| ||| ||| || |||||| |||||  | | |||||||| |    
T  16379495 atgcatcttctttttggtagcacattccataagaactccacagttaagcgtgtttgacttggagtaatctttggatgggtgacctaccgggaagtttcac 16379594  T
Q  116 aaaaagcgtgtgaatgataataaaacacgctgaaaagactcatgtttatttgttgggtcattc 178  Q
       ||||||| || |||  | |||||||||||||||||||| ||||  ||||| |||||||||    
T  16379595 tgtaagcgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtagggtcattc 16379657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 16 - 175
Target Start/End: Complemental strand, 25338041 - 25337882
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctc 115  Q
    |||||||||||||| | |||| |||| ||||| |||||||| || ||||||||||||||| ||||||||||||||||| |||||  | | |||||||| |    
T  25338041 atgcatcttcttttcgatagctcatttcataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttccc 25337942  T
Q  116 aaaaagcgtgtgaatgataataaaacacgctgaaaagactcatgtttatttgttgggtca 175  Q
       ||| ||| || |||  | |||||||||||||||||||| ||||  ||||| ||||||    
T  25337941 ggtaagtgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtca 25337882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 16 - 155
Target Start/End: Complemental strand, 30961927 - 30961788
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctc 115  Q
    |||||| || |||| ||||||| |  |||||| |||||||| || || |||||||||||||||||||||||||||||| ||||| |||| | ||||||||    
T  30961927 atgcatatttttttcggtagccgaaaccataagaactccacagttaaacgtgcttgacttagagcaattttgggatgggtgaccttctgggtagtttctc 30961828  T
Q  116 aaaaagcgtgtgaatgataataaaacacgctgaaaagact 155  Q
    | |||||||| || |||  | |||||||  ||||||||||    
T  30961827 agaaagcgtgcgagtgaggacaaaacacagtgaaaagact 30961788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 161
Target Start/End: Complemental strand, 30963307 - 30963162
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctc 115  Q
    ||||||||| ||||||||||||||   ||||| || || || || ||||||||||||||| ||||||||||||||||  ||||| |||  ||||||||||    
T  30963307 atgcatcttatttttggtagcccaaatcataagaattcaacagttaagcgtgcttgacttggagcaattttgggatgagtgaccttcttggaagtttctc 30963208  T
Q  116 aaaaagcgtgtgaatgataataaaacacgctgaaaagactcatgtt 161  Q
      |||||||| || |||  |||||| ||| ||||||||||| ||||    
T  30963207 ggaaagcgtgcgagtgaggataaaatacgttgaaaagactcgtgtt 30963162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 92
Target Start/End: Original strand, 29804784 - 29804860
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatg 92  Q
    |||||||||||||| |||||| |||||||||| |||||||| || |||||||||||||||  |||||||||||||||    
T  29804784 atgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttgaagcaattttgggatg 29804860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 155
Target Start/End: Original strand, 13191076 - 13191215
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctc 115  Q
    |||||||||||||||||||| |||||  |||| |||||||  || | | |||||||||||  || ||||||| ||| | ||||| ||||  |||||||||    
T  13191076 atgcatcttctttttggtagtccattttataagaactccatagttatgtgtgcttgacttgaagaaattttgagataggtgaccttctggaaagtttctc 13191175  T
Q  116 aaaaagcgtgtgaatgataataaaacacgctgaaaagact 155  Q
    ||||||||||||||||   | |||||||||| ||||||||    
T  13191176 aaaaagcgtgtgaatgcggacaaaacacgctaaaaagact 13191215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 175
Target Start/End: Original strand, 24818428 - 24818586
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctc 115  Q
    ||||||||| |||| |||||| |||||||||| |||||||| || ||||||||||||||| |||||||||| |||||| |||||  | | ||||||||      
T  24818428 atgcatctttttttcggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaatttt-ggatgggtgacctaccgggaagtttcct 24818526  T
Q  116 aaaaagcgtgtgaatgataataaaacacgctgaaaagactcatgtttatttgttgggtca 175  Q
       ||||||| || |||  | |||||||||||||||||||| ||||  ||||| ||||||    
T  24818527 ggtaagcgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtca 24818586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 175
Target Start/End: Original strand, 30966336 - 30966495
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctc 115  Q
    |||||||||||||| |||| | |||||||||| |||||||  || ||||||||||||||| || |||||||||||||| |||||  | | ||||||||||    
T  30966336 atgcatcttcttttcggtatctcattccataagaactccatagttaagcgtgcttgacttggaccaattttgggatgggtgacctaccgggaagtttctc 30966435  T
Q  116 aaaaagcgtgtgaatgataataaaacacgctgaaaagactcatgtttatttgttgggtca 175  Q
       |||| || || |||  | |||||||| ||||||||||| ||||  ||||| ||||||    
T  30966436 ggtaagcatgcgagtgaggacaaaacacgttgaaaagactcgtgttggtttgtggggtca 30966495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 99
Target Start/End: Original strand, 33771103 - 33771186
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgacc 99  Q
    |||||||||||||| |||||| |||| ||||| |||||||| || |||| |||||||||| ||||||||||||||||| |||||    
T  33771103 atgcatcttcttttcggtagctcatttcataagaactccacagttaagcatgcttgacttggagcaattttgggatgggtgacc 33771186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 16 - 175
Target Start/End: Original strand, 16379039 - 16379198
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgacc-atctgagaagtttct 114  Q
    ||||||||||||||||||||| |||||||||| |||||||| || ||||||||||||||| ||| | | || |||||| ||||| ||| | ||||||||     
T  16379039 atgcatcttctttttggtagcacattccataagaactccacagttaagcgtgcttgacttggagtagtctttggatgggtgacctatc-gggaagtttcc 16379137  T
Q  115 caaaaagcgtgtgaatgataataaaacacgctgaaaagactcatgtttatttgttgggtca 175  Q
        ||||||| || |||  | |||||||||||||||||||| ||||  ||||| ||||||    
T  16379138 gggtaagcgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtagggtca 16379198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 99
Target Start/End: Complemental strand, 5399861 - 5399778
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgacc 99  Q
    |||||||||||||| |||||| |||||||||| |||| ||  || ||||||||||||||| ||| ||||||||||||| |||||    
T  5399861 atgcatcttcttttcggtagctcattccataagaacttcatagttaagcgtgcttgacttggagaaattttgggatgggtgacc 5399778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 99
Target Start/End: Original strand, 11394636 - 11394718
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgacc 99  Q
    |||||||||||||| ||||||  ||||||||| |||| ||| || ||||||||||||||| ||||||||||||||||| |||||    
T  11394636 atgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtgcttgacttggagcaattttgggatgggtgacc 11394718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 99
Target Start/End: Complemental strand, 29259664 - 29259581
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgacc 99  Q
    |||||||||||||| |||||| |||| ||||| |||| ||  || ||||||||||||||| ||||||||||||||||| |||||    
T  29259664 atgcatcttcttttcggtagctcatttcataagaacttcatagttaagcgtgcttgactttgagcaattttgggatgggtgacc 29259581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 214
Target Start/End: Complemental strand, 25434100 - 25433902
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctc 115  Q
    |||||||| |||| |||||||||||||||||| |||||||| || ||||||||||||||| |||   | || |||||| |||||| | | |||||||       
T  25434100 atgcatctcctttctggtagcccattccataagaactccacagttaagcgtgcttgacttggagtggtctttggatgggtgaccaacagggaagttttct 25434001  T
Q  116 aaaaagcgtgtgaatgataataaaacacgctgaaaagactcatgtttatttgttgggtcattcagtaatacttaaagtcatatgtgatcttaaagtttt 214  Q
       |||||||||| | |  | ||||||||||||||||| || ||||  ||||| |||||| || | ||| ||||||||||| || ||| ||| ||||||    
T  25434000 ggtaagcgtgtgagtaaggacaaaacacgctgaaaagattcgtgttggtttgtagggtcagtcggcaatgcttaaagtcatctgggatgttacagtttt 25433902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 112
Target Start/End: Complemental strand, 30963764 - 30963668
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagttt 112  Q
    ||||||||||||| ||||||||||  ||||||||||||||| || ||||||||||||||| | | | ||||||||| | ||||| |||  |||||||    
T  30963764 atgcatcttctttctggtagcccaaaccataataactccacagttaagcgtgcttgacttggcggagttttgggataggtgaccttctaggaagttt 30963668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 19 - 194
Target Start/End: Original strand, 15639839 - 15640014
Alignment:
Q  19 catcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctcaaa 118  Q
    |||||||||||||| | |||| |||| || ||||||||  | ||||||||||||||| ||| | | || |||||| |||||  ||| |||||||||| |     
T  15639839 catcttctttttggaaacccaatccacaagaactccacaattaagcgtgcttgacttggagtagtctttggatgggtgacctactgggaagtttctcgat 15639938  T
Q  119 aagcgtgtgaatgataataaaacacgctgaaaagactcatgtttatttgttgggtcattcagtaatacttaaagtc 194  Q
    ||||||| || |||  | ||||||||| |||||||||| ||||  || || |||||| || | ||| |||||||||    
T  15639939 aagcgtgcgagtgaggacaaaacacgcagaaaagactcgtgttggttggtagggtcagtcggcaatgcttaaagtc 15640014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 75
Target Start/End: Original strand, 33174605 - 33174664
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgactt 75  Q
    |||||||||||||| ||||||||||||||||| |||||| | || |||||||||||||||    
T  33174605 atgcatcttcttttcggtagcccattccataagaactccgcagttaagcgtgcttgactt 33174664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 194
Target Start/End: Original strand, 1912627 - 1912804
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctc 115  Q
    |||||||||||||| ||||||||||||||||| |||||||| || ||||||| ||||||| ||| | | || |||||| | |||  | | ||||||||||    
T  1912627 atgcatcttctttt-ggtagcccattccataagaactccacagttaagcgtgattgacttggagtactctttggatgggttacctaccgggaagtttctc 1912725  T
Q  116 aaaaagcgtgtgaatgataataaaacacgctgaaaagactcatgtttatttgttgggtcattcagtaatacttaaagtc 194  Q
       ||||||| || |||  | |||||||| ||||||||||| ||||  ||||| | |||| || | ||| |||||||||    
T  1912726 ggtaagcgtgcgagtgaggacaaaacacgttgaaaagactcgtgttggtttgtagagtcagtcggcaatgcttaaagtc 1912804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 161
Target Start/End: Original strand, 15620003 - 15620145
Alignment:
Q  19 catcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctcaaa 118  Q
    |||||||||||||| | |||| ||||||| ||||||||  | ||||||||||||||| ||| | | || |||||| |||||  ||| ||||||||||       
T  15620003 catcttctttttggaaacccaatccataagaactccacaattaagcgtgcttgactttgagtagtctttggatgggtgacctactgggaagtttctcggt 15620102  T
Q  119 aagcgtgtgaatgataataaaacacgctgaaaagactcatgtt 161  Q
    ||||||| || |||  | ||||| |||||||||||||| ||||    
T  15620103 aagcgtgcgagtgaggacaaaactcgctgaaaagactcgtgtt 15620145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 91
Target Start/End: Complemental strand, 32377756 - 32377685
Alignment:
Q  20 atcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggat 91  Q
    ||||| |||| |||||| ||||||| || |||||||| || |||| |||||||||| |||||||||||||||    
T  32377756 atcttgttttcggtagctcattccaaaagaactccacagttaagcatgcttgacttggagcaattttgggat 32377685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 38898956 - 38898893
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagag 79  Q
    |||||| |||||||||||| | |||| ||||| |||||||| || |||||||||||||||||||    
T  38898956 atgcattttctttttggtaacacatttcataagaactccacagttaagcgtgcttgacttagag 38898893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 49 - 175
Target Start/End: Complemental strand, 32377918 - 32377792
Alignment:
Q  49 aactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctcaaaaagcgtgtgaatgataataaaacacgctga 148  Q
    |||||||| || ||||||| ||||||| ||||||||||||||||| ||| |  ||| |||||||  |   ||||||| || |||  | ||||||||||||    
T  32377918 aactccacagttaagcgtgtttgacttggagcaattttgggatgggtgatctactgggaagttttccggtaagcgtgcgagtgaggacaaaacacgctga 32377819  T
Q  149 aaagactcatgtttatttgttgggtca 175  Q
    |||||||| ||||  ||||| ||||||    
T  32377818 aaagactcgtgttggtttgtggggtca 32377792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 75
Target Start/End: Original strand, 1707143 - 1707202
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgactt 75  Q
    |||||||||||||||||||||||||  ||||| |||||||| || ||| ||| |||||||    
T  1707143 atgcatcttctttttggtagcccatctcataagaactccacagttaagagtgtttgactt 1707202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 55
Target Start/End: Complemental strand, 18098922 - 18098883
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactcca 55  Q
    ||||||||||||||||||||| |||||||||| |||||||    
T  18098922 atgcatcttctttttggtagctcattccataagaactcca 18098883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 67
Target Start/End: Original strand, 33175060 - 33175111
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtg 67  Q
    ||||||||||||||||||||| |||| ||||| |||||||| || |||||||    
T  33175060 atgcatcttctttttggtagctcatttcataagaactccacagttaagcgtg 33175111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 93
Target Start/End: Original strand, 1953257 - 1953334
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatgg 93  Q
    |||||||||||||||||||| |||  ||||||| ||| || ||| |||| ||||| |||| | || ||||||||||||    
T  1953257 atgcatcttctttttggtagtccaaaccataattacttcatggttaagcatgcttaactttgcgctattttgggatgg 1953334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 114
Target Start/End: Complemental strand, 18875983 - 18875931
Alignment:
Q  62 agcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttct 114  Q
    ||||||||||| || ||||||||||||||||| ||| | ||||| ||||||||    
T  18875983 agcgtgcttgattttgagcaattttgggatgggtgatcttctgaaaagtttct 18875931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 112
Target Start/End: Complemental strand, 27882970 - 27882874
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagttt 112  Q
    ||||||||||||||| |||| || |||||||| ||||||||  | ||||||| ||||||| ||| | | || |||| | |||||  |||||||||||    
T  27882970 atgcatcttcttttttgtaggccgttccataagaactccacaattaagcgtgtttgacttggagtagtctttggataggtgacctactgagaagttt 27882874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0389 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 16 - 175
Target Start/End: Complemental strand, 13577 - 13418
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctc 115  Q
    |||||||||||||| |||||| |||||||||| |||||||| || ||||||||||||||| ||||||||||||||||| |||||  | | |||||||||     
T  13577 atgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgactttgagcaattttgggatgggtgacctaccgggaagtttctt 13478  T
Q  116 aaaaagcgtgtgaatgataataaaacacgctgaaaagactcatgtttatttgttgggtca 175  Q
       ||||||| || |||  | |||||||||||||||||||| ||||  ||||| ||||||    
T  13477 tgtaagcgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtca 13418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 64; Significance: 4e-28; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 16 - 175
Target Start/End: Original strand, 28495956 - 28496115
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctc 115  Q
    |||||||||||||| |||||| |||||||||| |||||||| || ||||||||||||||| ||||||||||||||||| |||||   || |||||||| |    
T  28495956 atgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctattgggaagtttccc 28496055  T
Q  116 aaaaagcgtgtgaatgataataaaacacgctgaaaagactcatgtttatttgttgggtca 175  Q
       ||||||| || |||  | |||||||||||||||||||| ||||  ||||| ||||||    
T  28496056 ggtaagcgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtca 28496115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 16 - 175
Target Start/End: Complemental strand, 34405635 - 34405476
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctc 115  Q
    |||||||||||||| |||||| |||||||||| |||||||| || ||||||||||||||| ||||||||||||||||| |||||  | | |||||||| |    
T  34405635 atgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttccc 34405536  T
Q  116 aaaaagcgtgtgaatgataataaaacacgctgaaaagactcatgtttatttgttgggtca 175  Q
       ||||||| || |||  | |||||||||||||||||| | |||| |||||| ||||||    
T  34405535 ggtaagcgtgcgagtgaggacaaaacacgctgaaaagacccgtgttgatttgtggggtca 34405476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 16 - 161
Target Start/End: Complemental strand, 2941801 - 2941656
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctc 115  Q
    |||||||||||||| |||||| |||||||||| |||||||| || ||||||||||||||| ||||||||||||||||| |||||  | | |||||||| |    
T  2941801 atgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttccc 2941702  T
Q  116 aaaaagcgtgtgaatgataataaaacacgctgaaaagactcatgtt 161  Q
       ||||||| || |||  | |||||||||||||||||||| ||||    
T  2941701 ggtaagcgtgcgagtgaggagaaaacacgctgaaaagactcgtgtt 2941656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 16 - 175
Target Start/End: Complemental strand, 7646522 - 7646363
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctc 115  Q
    |||||||||||||| |||||| |||||||||| |||| ||| || ||||||||||||||| ||||||||||||||||| |||||  | | ||||||||||    
T  7646522 atgcatcttcttttcggtagctcattccataagaacttcacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttctc 7646423  T
Q  116 aaaaagcgtgtgaatgataataaaacacgctgaaaagactcatgtttatttgttgggtca 175  Q
       ||| ||| || |||  | |||||||||||||||||||| ||||  ||||| ||||||    
T  7646422 ggtaagtgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtca 7646363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 16 - 175
Target Start/End: Complemental strand, 13125180 - 13125020
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctc 115  Q
    |||||||||||||| |||||| |||||||||| |||||||| || ||||||||||||||| ||||||||||||||||| |||||  | | |||||||| |    
T  13125180 atgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttccc 13125081  T
Q  116 aaaaagcgtgtgaatga-taataaaacacgctgaaaagactcatgtttatttgttgggtca 175  Q
    |  ||||||| || |||  |  |||||||||||||| ||||| ||||  ||||| ||||||    
T  13125080 agtaagcgtgcgagtgaggacaaaaacacgctgaaaggactcgtgttggtttgtggggtca 13125020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 175
Target Start/End: Original strand, 2193358 - 2193517
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctc 115  Q
    ||||||||||| || |||||| |||| ||||  |||||||| || |||||||||||| || ||||||||||||||||| |||||  | | |||||||| |    
T  2193358 atgcatcttctattcggtagctcatttcataggaactccacagttaagcgtgcttgatttggagcaattttgggatgggtgacctaccgggaagtttccc 2193457  T
Q  116 aaaaagcgtgtgaatgataataaaacacgctgaaaagactcatgtttatttgttgggtca 175  Q
       |||||||||| |||  | |||||||||||||||||||| |||| |||||| ||||||    
T  2193458 ggtaagcgtgtgagtgaggacaaaacacgctgaaaagactcgtgttgatttgtggggtca 2193517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 99
Target Start/End: Original strand, 2465835 - 2465918
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgacc 99  Q
    |||||||||||||| |||||| |||||||||| |||||||| || ||||||||||||||| ||||||||||||||||| |||||    
T  2465835 atgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacc 2465918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 99
Target Start/End: Complemental strand, 28495652 - 28495569
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgacc 99  Q
    |||||||||||||| |||||| |||||||||| |||||||| || ||||||||||||||| ||||||||||||||||| |||||    
T  28495652 atgcatcttcttttaggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacc 28495569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 99
Target Start/End: Original strand, 42515646 - 42515729
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgacc 99  Q
    |||||||||||||| |||||| |||||||||| |||||||| || ||||||||||||||| ||||||||||||||||| |||||    
T  42515646 atgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacc 42515729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 168
Target Start/End: Original strand, 2189246 - 2189398
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctc 115  Q
    |||||||||||||| | |||| |||| ||||| |||||||| || ||||||||||||||| ||||||||||||||||  |||||  | | |||||||| |    
T  2189246 atgcatcttcttttcgatagctcatttcataagaactccacagttaagcgtgcttgacttggagcaattttgggatgagtgacctaccgggaagtttccc 2189345  T
Q  116 aaaaagcgtgtgaatgataataaaacacgctgaaaagactcatgtttatttgt 168  Q
       |||||||||| |||  | |||||||||||| ||||||| |||| ||||||    
T  2189346 ggtaagcgtgtgagtgaggacaaaacacgctgagaagactcgtgttgatttgt 2189398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 175
Target Start/End: Complemental strand, 13122549 - 13122389
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctc 115  Q
    |||||||||||||| |||||| |||||||||| |||||||| || |||||||||||| || ||||||||||||||||| |||||  | | |||||||| |    
T  13122549 atgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgatttggagcaattttgggatgggtgacctaccgggaagtttccc 13122450  T
Q  116 aaaaagcgtgtgaatga-taataaaacacgctgaaaagactcatgtttatttgttgggtca 175  Q
       ||||||| || |||  |  |||||||||||||||||||| ||||  ||||| ||||||    
T  13122449 ggtaagcgtgcgagtgaggacaaaaacacgctgaaaagactcgtgttggtttgtggggtca 13122389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 16 - 99
Target Start/End: Original strand, 9125061 - 9125144
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgacc 99  Q
    |||||||||||||| |||||| |||||||||| |||||||| || ||||||||||||||  ||||||||||||||||| |||||    
T  9125061 atgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgactcggagcaattttgggatgggtgacc 9125144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 17 - 99
Target Start/End: Original strand, 2466027 - 2466109
Alignment:
Q  17 tgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgacc 99  Q
    ||||||||||||| |||||| |||||||||| |||||||| || ||||||||||||||| ||||||||| ||||||| |||||    
T  2466027 tgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaatttcgggatgggtgacc 2466109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 31 - 161
Target Start/End: Complemental strand, 43776319 - 43776189
Alignment:
Q  31 ggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctcaaaaagcgtgtgaat 130  Q
    |||||| |||||||||| |||||||| || ||||||||||||||| |||||||||||| |||| |||||  | | |||||||  ||  ||||||| ||||    
T  43776319 ggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttggaatgggtgacctgcggggaagttttccagtaagcgtgcgaat 43776220  T
Q  131 gataataaaacacgctgaaaagactcatgtt 161  Q
    ||  | |||||||||||||||||||| ||||    
T  43776219 gaagacaaaacacgctgaaaagactcgtgtt 43776189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 10 - 99
Target Start/End: Original strand, 7646511 - 7646600
Alignment:
Q  10 aagaatatgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgacc 99  Q
    ||||| ||||||||| |||| |||| | |||||||||| |||||||| || ||||||||||||||| ||||||||||||||||| |||||    
T  7646511 aagaagatgcatcttgttttcggtaactcattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacc 7646600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 168
Target Start/End: Original strand, 18833388 - 18833540
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctc 115  Q
    |||||||||||||| ||||||  ||| ||||| |||||||| || ||||||| ||||||| ||||||||||||||||| |||||  | | |||||||| |    
T  18833388 atgcatcttcttttcggtagctaattacataagaactccacagttaagcgtgtttgactttgagcaattttgggatgggtgacctaccgggaagtttccc 18833487  T
Q  116 aaaaagcgtgtgaatgataataaaacacgctgaaaagactcatgtttatttgt 168  Q
       || |||| || |||  | |||||||||||||||||||| |||| ||||||    
T  18833488 ggtaaacgtgcgagtgaggacaaaacacgctgaaaagactcgtgttgatttgt 18833540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 175
Target Start/End: Original strand, 36422354 - 36422512
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctc 115  Q
    |||||||||||||| |||||| |||| ||||| |||||||| || ||||||||||||||| |||||| |||||||||| |||||  | | |||||||| |    
T  36422354 atgcatcttcttttcggtagctcatttcataagaactccacagttaagcgtgcttgacttggagcaa-tttgggatgggtgacctaccgggaagtttccc 36422452  T
Q  116 aaaaagcgtgtgaatgataataaaacacgctgaaaagactcatgtttatttgttgggtca 175  Q
       ||| ||| || |||  | |||||||||||||||||||| ||||  ||||| ||||||    
T  36422453 ggtaagtgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtca 36422512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 16 - 98
Target Start/End: Complemental strand, 5406632 - 5406550
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgac 98  Q
    ||||||||| |||||||| |||||  |||||| |||||||| || ||||||||||||||| ||||||||||||||||| ||||    
T  5406632 atgcatcttatttttggttgcccaaaccataagaactccacagttaagcgtgcttgactttgagcaattttgggatggatgac 5406550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 16 - 76
Target Start/End: Complemental strand, 6747642 - 6747582
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgactta 76  Q
    |||||||||||||||||||||| ||||||||| |||||||| || ||||||||||||||||    
T  6747642 atgcatcttctttttggtagcctattccataaaaactccacagttaagcgtgcttgactta 6747582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 75
Target Start/End: Original strand, 679918 - 679977
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgactt 75  Q
    |||||| ||||||||||||||||||||||||| |||||||| || |||||||||||||||    
T  679918 atgcatattctttttggtagcccattccataagaactccacagttaagcgtgcttgactt 679977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 175
Target Start/End: Complemental strand, 22529279 - 22529120
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctc 115  Q
    ||||||||||||||  ||| | |||| || || |||| ||| || ||||||| ||||||| ||| | | || |||||| |||||  ||||||||||||||    
T  22529279 atgcatcttcttttcagtaactcattacaaaagaacttcacagttaagcgtgtttgacttggagtagtctttggatgggtgacctactgagaagtttctc 22529180  T
Q  116 aaaaagcgtgtgaatgataataaaacacgctgaaaagactcatgtttatttgttgggtca 175  Q
       |||||||||| |||  | |||| ||||||||||||||||||||  ||||| ||||||    
T  22529179 ggtaagcgtgtgagtgaggacaaaatacgctgaaaagactcatgttggtttgtagggtca 22529120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 75
Target Start/End: Complemental strand, 35474165 - 35474106
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgactt 75  Q
    ||||||||||||||||||||| |||||||||| |||||||| || ||||||| |||||||    
T  35474165 atgcatcttctttttggtagctcattccataagaactccacagttaagcgtgtttgactt 35474106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 75
Target Start/End: Original strand, 42515194 - 42515253
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgactt 75  Q
    |||||| |||||||||||||| |||||||||| |||||||| || |||||||||||||||    
T  42515194 atgcattttctttttggtagctcattccataagaactccacagttaagcgtgcttgactt 42515253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 98
Target Start/End: Complemental strand, 6719118 - 6719037
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgac 98  Q
    |||||||||||||| |||||| |||||||||| |||||||  || ||||||||||||||| ||| || |||||||||| ||||    
T  6719118 atgcatcttcttttcggtagctcattccataagaactccagagttaagcgtgcttgacttggagtaa-tttgggatgggtgac 6719037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 75
Target Start/End: Complemental strand, 2611696 - 2611637
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgactt 75  Q
    ||||||||||||||||||||||||||| |||| |||||||  || |||||||||| ||||    
T  2611696 atgcatcttctttttggtagcccattctataagaactccatagttaagcgtgctttactt 2611637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 113
Target Start/End: Original strand, 1628815 - 1628912
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttc 113  Q
    ||||||||||||||| | ||||||| |||||| |||||||  || ||| ||  ||| ||| ||||||||||||||||| |||||  ||| ||||||||    
T  1628815 atgcatcttcttttttgaagcccataccataagaactccatagttaagtgtatttggcttggagcaattttgggatgggtgacctcctgcgaagtttc 1628912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 194
Target Start/End: Complemental strand, 3305271 - 3305214
Alignment:
Q  137 aaaacacgctgaaaagactcatgtttatttgttgggtcattcagtaatacttaaagtc 194  Q
    |||||||||||||||||||| |||| |||||| || ||| |||| |||||||||||||    
T  3305271 aaaacacgctgaaaagactcgtgttgatttgtaggatcagtcagcaatacttaaagtc 3305214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 175
Target Start/End: Complemental strand, 29357500 - 29357341
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctc 115  Q
    |||||||||||||| | |||||| || ||||| |||| ||| || || |||| ||||||||||| | | ||  ||||| ||||| || |  ||||| |||    
T  29357500 atgcatcttcttttcgatagcccgtttcataagaactacacagttaaccgtgtttgacttagagtagtcttaagatggatgaccttccggtaagttcctc 29357401  T
Q  116 aaaaagcgtgtgaatgataataaaacacgctgaaaagactcatgtttatttgttgggtca 175  Q
     ||||||||| || ||| || ||| |||| ||||||||||| ||||  ||||| ||||||    
T  29357400 gaaaagcgtgcgagtgagaacaaagcacgttgaaaagactcgtgttggtttgtagggtca 29357341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 61 - 128
Target Start/End: Complemental strand, 37671760 - 37671693
Alignment:
Q  61 aagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctcaaaaagcgtgtga 128  Q
    |||||||||||| || ||||||||||| ||||| | ||| | ||| |||||||||| |||||||||||    
T  37671760 aagcgtgcttgaattggagcaattttgtgatgggtcaccttttgaaaagtttctcataaagcgtgtga 37671693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 75
Target Start/End: Original strand, 46425843 - 46425902
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgactt 75  Q
    |||||||||||||| |||| |  ||||||||| |||||||| || |||||||||||||||    
T  46425843 atgcatcttcttttcggtatcttattccataagaactccacagttaagcgtgcttgactt 46425902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 70
Target Start/End: Complemental strand, 31406628 - 31406574
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgctt 70  Q
    |||||||||||||| |||||||| || ||||| |||||||| || ||||||||||    
T  31406628 atgcatcttcttttcggtagcccgtttcataagaactccacagttaagcgtgctt 31406574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 124
Target Start/End: Original strand, 25182466 - 25182571
Alignment:
Q  19 catcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctcaaa 118  Q
    |||||| |||| |||| | |||||||||| |||| ||| || ||| ||| ||||||| ||| | | || ||||||  |||| |||| |||||||||||||    
T  25182466 catcttattttcggtaactcattccataagaacttcacagttaagtgtgtttgacttggagtagtctttggatggaggaccttctgggaagtttctcaaa 25182565  T
Q  119 aagcgt 124  Q
    ||||||    
T  25182566 aagcgt 25182571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 52
Target Start/End: Original strand, 16192421 - 16192457
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataact 52  Q
    |||||||||| ||||||||||||||||||||| ||||    
T  16192421 atgcatcttcgttttggtagcccattccataagaact 16192457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 64; Significance: 4e-28; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 16 - 175
Target Start/End: Complemental strand, 20054580 - 20054421
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctc 115  Q
    |||||||||||||| |||||| |||||||||| |||||||| || ||||||||||||||| ||||||||||||||||| |||||  | | |||||||| |    
T  20054580 atgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttccc 20054481  T
Q  116 aaaaagcgtgtgaatgataataaaacacgctgaaaagactcatgtttatttgttgggtca 175  Q
       ||||||| || |||  | |||||||||||||||||||| ||||  ||||| ||||||    
T  20054480 ggtaagcgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtca 20054421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 16 - 175
Target Start/End: Complemental strand, 20055036 - 20054877
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctc 115  Q
    |||||||||||||| |||||| |||||||||| |||||||| || ||||||||||||||| ||||||||||||||||| |||||  | | |||||||| |    
T  20055036 atgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttccc 20054937  T
Q  116 aaaaagcgtgtgaatgataataaaacacgctgaaaagactcatgtttatttgttgggtca 175  Q
       ||||||| || |||  | |||||||||||||||||||| ||||  ||||| ||||||    
T  20054936 ggtaagcgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtca 20054877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 16 - 175
Target Start/End: Complemental strand, 20055492 - 20055333
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctc 115  Q
    |||||||||||||| |||||| |||||||||| |||||||| || ||||||||||||||| ||||||||||||||||| |||||  | | |||||||| |    
T  20055492 atgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttccc 20055393  T
Q  116 aaaaagcgtgtgaatgataataaaacacgctgaaaagactcatgtttatttgttgggtca 175  Q
       ||||||| || |||  | |||||||||||||||||||| ||||  ||||| ||||||    
T  20055392 ggtaagcgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtca 20055333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 16 - 175
Target Start/End: Complemental strand, 20055948 - 20055789
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctc 115  Q
    |||||||||||||| |||||| |||||||||| |||||||| || ||||||||||||||| ||||||||||||||||| |||||  | | |||||||| |    
T  20055948 atgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttccc 20055849  T
Q  116 aaaaagcgtgtgaatgataataaaacacgctgaaaagactcatgtttatttgttgggtca 175  Q
       ||||||| || |||  | |||||||||||||||||||| ||||  ||||| ||||||    
T  20055848 ggtaagcgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtca 20055789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 16 - 175
Target Start/End: Complemental strand, 20056404 - 20056245
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctc 115  Q
    |||||||||||||| |||||| |||||||||| |||||||| || ||||||||||||||| ||||||||||||||||| |||||  | | |||||||| |    
T  20056404 atgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttccc 20056305  T
Q  116 aaaaagcgtgtgaatgataataaaacacgctgaaaagactcatgtttatttgttgggtca 175  Q
       ||||||| || |||  | |||||||||||||||||||| ||||  ||||| ||||||    
T  20056304 ggtaagcgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtca 20056245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 16 - 175
Target Start/End: Complemental strand, 20057307 - 20057148
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctc 115  Q
    |||||||||||||| |||||| |||||||||| |||||||| || ||||||||||||||| ||||||||||||||||| |||||  | | |||||||| |    
T  20057307 atgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttccc 20057208  T
Q  116 aaaaagcgtgtgaatgataataaaacacgctgaaaagactcatgtttatttgttgggtca 175  Q
       ||||||| || |||  | |||||||||||||||||||| ||||  ||||| ||||||    
T  20057207 ggtaagcgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtca 20057148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 16 - 175
Target Start/End: Complemental strand, 20057763 - 20057604
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctc 115  Q
    |||||||||||||| |||||| |||||||||| |||||||| || ||||||||||||||| ||||||||||||||||| |||||  | | |||||||| |    
T  20057763 atgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttccc 20057664  T
Q  116 aaaaagcgtgtgaatgataataaaacacgctgaaaagactcatgtttatttgttgggtca 175  Q
       ||||||| || |||  | |||||||||||||||||||| ||||  ||||| ||||||    
T  20057663 ggtaagcgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtca 20057604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 16 - 175
Target Start/End: Complemental strand, 16451977 - 16451818
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctc 115  Q
    |||||||||||||| |||||  |||||||||| |||||||| || ||||||||||||||| ||||||||||||||||| |||||  | |  ||||||  |    
T  16451977 atgcatcttcttttcggtagttcattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccggaaagttttcc 16451878  T
Q  116 aaaaagcgtgtgaatgataataaaacacgctgaaaagactcatgtttatttgttgggtca 175  Q
    || ||||||| |  |||| | |||||||||||||||||||| ||||  ||||| ||||||    
T  16451877 aataagcgtgcgcgtgatgacaaaacacgctgaaaagactcgtgttggtttgtggggtca 16451818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 16 - 175
Target Start/End: Complemental strand, 16461130 - 16460971
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctc 115  Q
    |||||||||||||| |||||  |||||||||| |||||||| || ||||||||||||||| ||||||||||||||||| |||||  | |  ||||||  |    
T  16461130 atgcatcttcttttcggtagttcattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccggaaagttttcc 16461031  T
Q  116 aaaaagcgtgtgaatgataataaaacacgctgaaaagactcatgtttatttgttgggtca 175  Q
    || ||||||| |  |||| | |||||||||||||||||||| ||||  ||||| ||||||    
T  16461030 aataagcgtgcgcgtgatgacaaaacacgctgaaaagactcgtgttggtttgtggggtca 16460971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 16 - 175
Target Start/End: Complemental strand, 20056860 - 20056701
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctc 115  Q
    |||||||||||||| |||||| |||||||||| |||||||| || ||||||| ||||||| ||||||||||||||||| |||||  | | |||||||| |    
T  20056860 atgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgtttgacttggagcaattttgggatgggtgacctaccgggaagtttccc 20056761  T
Q  116 aaaaagcgtgtgaatgataataaaacacgctgaaaagactcatgtttatttgttgggtca 175  Q
       ||||||| || |||  | |||||||||||||||||||| ||||  ||||| ||||||    
T  20056760 ggtaagcgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtca 20056701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 16 - 175
Target Start/End: Complemental strand, 20845705 - 20845546
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctc 115  Q
    |||||||||||||| |||||| |||||||||| |||||||| || ||||||||||||||| ||| ||||||||||||| |||||  | | |||||||| |    
T  20845705 atgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttggagaaattttgggatgggtgacctaccgggaagtttccc 20845606  T
Q  116 aaaaagcgtgtgaatgataataaaacacgctgaaaagactcatgtttatttgttgggtca 175  Q
       ||||||| || |||  | |||||||||||||||||||| ||||  ||||| ||||||    
T  20845605 ggtaagcgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtca 20845546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 175
Target Start/End: Original strand, 52250645 - 52250804
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctc 115  Q
    |||||||||||||| |||||| |||||||||| |||||||| || |||||||||||||||  |||||||||||||||| |||||  | | |||||||| |    
T  52250645 atgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttgaagcaattttgggatgggtgacctaccgggaagtttccc 52250744  T
Q  116 aaaaagcgtgtgaatgataataaaacacgctgaaaagactcatgtttatttgttgggtca 175  Q
       ||| ||| || |||  | |||||||||||||||||||| ||||  ||||| ||||||    
T  52250745 ggtaagtgtgcgagtgaagacaaaacacgctgaaaagactcgtgttggtttgtggggtca 52250804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 175
Target Start/End: Original strand, 52250982 - 52251141
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctc 115  Q
    |||||||||||||| |||||| |||||||||| |||||||| || |||||||||||||||  |||||||||||||||| |||||  | | |||||||| |    
T  52250982 atgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttgaagcaattttgggatgggtgacctaccgggaagtttccc 52251081  T
Q  116 aaaaagcgtgtgaatgataataaaacacgctgaaaagactcatgtttatttgttgggtca 175  Q
       ||| ||| || |||  | |||||||||||||||||||| ||||  ||||| ||||||    
T  52251082 ggtaagtgtgcgagtgaagacaaaacacgctgaaaagactcgtgttggtttgtggggtca 52251141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 161
Target Start/End: Original strand, 38341008 - 38341153
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctc 115  Q
    |||||||||| ||| |||||| |||||||||| |||| ||| || ||||||||||||||| ||||||||||||||||| |||||  ||| |||||||| |    
T  38341008 atgcatcttcatttcggtagctcattccataagaacttcacagttaagcgtgcttgacttggagcaattttgggatgggtgacctactgggaagtttccc 38341107  T
Q  116 aaaaagcgtgtgaatgataataaaacacgctgaaaagactcatgtt 161  Q
       ||||||| || |||  | ||||||||| |||||||||| ||||    
T  38341108 ggtaagcgtgcgagtgaggacaaaacacgcggaaaagactcgtgtt 38341153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 16 - 99
Target Start/End: Complemental strand, 20054124 - 20054041
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgacc 99  Q
    |||||||||||||| |||||| |||||||||| |||||||| || ||||||||||||||  ||||||||||||||||| |||||    
T  20054124 atgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgactaggagcaattttgggatgggtgacc 20054041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 16 - 99
Target Start/End: Complemental strand, 46693779 - 46693696
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgacc 99  Q
    |||||||||||||| |||| | |||| |||||||||||||| || ||||||||||||||| ||||||||||||||||| |||||    
T  46693779 atgcatcttcttttcggtatctcatttcataataactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacc 46693696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 16 - 99
Target Start/End: Complemental strand, 51372918 - 51372835
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgacc 99  Q
    ||||||||| |||| |||||| |||||||||| |||||||| || ||||||||||||||| ||||||||||||||||| |||||    
T  51372918 atgcatcttattttcggtagctcattccataagaactccacagttaagcgtgcttgactttgagcaattttgggatgggtgacc 51372835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 16 - 175
Target Start/End: Original strand, 52250308 - 52250467
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctc 115  Q
    |||||||||||||| |||||| |||||||||| |||||||| || |||||||||||||||  ||||||||||| |||| |||||  | | |||||||| |    
T  52250308 atgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttgaagcaattttggaatgggtgacctaccgggaagtttccc 52250407  T
Q  116 aaaaagcgtgtgaatgataataaaacacgctgaaaagactcatgtttatttgttgggtca 175  Q
       ||| ||| || |||  | |||||||||||||||||||| ||||  ||||| ||||||    
T  52250408 ggtaagtgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtca 52250467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 180
Target Start/End: Complemental strand, 50003119 - 50002955
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctc 115  Q
    ||||||||||||||  ||||| ||||||| || |||| ||| || ||||||||||||||| |||||||||| |||||| |||||  | | |||||||| |    
T  50003119 atgcatcttcttttcagtagctcattccaaaagaacttcacagttaagcgtgcttgacttggagcaatttttggatgggtgacctaccgggaagtttccc 50003020  T
Q  116 aaaaagcgtgtgaatgataataaaacacgctgaaaagactcatgtttatttgttgggtcattcag 180  Q
       ||||||| || |||  | |||||||||||||||||||| ||||  ||||| |||||| ||||    
T  50003019 ggtaagcgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcag 50002955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 99
Target Start/End: Complemental strand, 20060384 - 20060301
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgacc 99  Q
    |||||||||||||| |||||| |||||||||| |||||||| || ||| ||||||||||| || |||||||||||||| |||||    
T  20060384 atgcatcttcttttcggtagctcattccataagaactccacagttaagtgtgcttgacttggatcaattttgggatgggtgacc 20060301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 16 - 93
Target Start/End: Complemental strand, 35760958 - 35760881
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatgg 93  Q
    ||||||||||||||||||||| |||||||| | ||||||   || ||||||||||||||| |||||||||||||||||    
T  35760958 atgcatcttctttttggtagctcattccatgagaactccgtagttaagcgtgcttgacttggagcaattttgggatgg 35760881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 43057109 - 43057046
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagag 79  Q
    |||||||||||||| ||||||||||||||||| |||||||| || ||||||| |||||||||||    
T  43057109 atgcatcttcttttcggtagcccattccataagaactccacagttaagcgtgattgacttagag 43057046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 91
Target Start/End: Complemental strand, 50002329 - 50002254
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggat 91  Q
    |||||||||||||| |||||| |||||||||| |||||||| ||  || ||||||||||| |||||||||||||||    
T  50002329 atgcatcttcttttcggtagctcattccataagaactccacagttgagtgtgcttgacttggagcaattttgggat 50002254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 175
Target Start/End: Complemental strand, 50002751 - 50002592
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctc 115  Q
    |||||||||||||| |||||| |||||  ||| |||||||  || ||||||| ||||||| ||||||||||||||||| |||||  | | |||||| | |    
T  50002751 atgcatcttcttttcggtagctcattctttaagaactccatagttaagcgtgtttgacttggagcaattttgggatggatgacctaccgggaagttcccc 50002652  T
Q  116 aaaaagcgtgtgaatgataataaaacacgctgaaaagactcatgtttatttgttgggtca 175  Q
       ||||||| || |||  | |||||||||||||||||||| ||||  ||||| ||||||    
T  50002651 ggtaagcgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtca 50002592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 8278065 - 8278142
Alignment:
Q  22 cttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgacc 99  Q
    |||||||||||||| ||||| |||||  ||||||| || |||||||||||||||  |||||||||||||||| |||||    
T  8278065 cttctttttggtagtccatttcataaagactccacagttaagcgtgcttgacttgaagcaattttgggatgggtgacc 8278142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 20 - 161
Target Start/End: Original strand, 23180836 - 23180977
Alignment:
Q  20 atcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctcaaaa 119  Q
    ||||||| || | ||||||||||||||| || |||||  | ||||||||||||||| ||| ||||||||||||| | ||| ||||  |||||| ||||||    
T  23180836 atcttctattcgctagcccattccataagaattccacaattaagcgtgcttgacttggagaaattttgggatgggttaccttctggaaagtttttcaaaa 23180935  T
Q  120 agcgtgtgaatgataataaaacacgctgaaaagactcatgtt 161  Q
    |  ||| || |||  | |||||| |||||||||||| |||||    
T  23180936 aatgtgcgagtgacgacaaaacatgctgaaaagactaatgtt 23180977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 161
Target Start/End: Complemental strand, 35759652 - 35759507
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctc 115  Q
    |||||||||||||| |||||| |||||||||| |||| ||  || || |||||||||||| |||| |||||||||| | |||||  | | ||||||| ||    
T  35759652 atgcatcttcttttcggtagctcattccataagaacttcatagttaaacgtgcttgacttggagctattttgggattggtgacctaccgggaagtttttc 35759553  T
Q  116 aaaaagcgtgtgaatgataataaaacacgctgaaaagactcatgtt 161  Q
       ||||||| || |||  | |||||||||||||||||||| ||||    
T  35759552 ggtaagcgtgcgagtgaggacaaaacacgctgaaaagactcgtgtt 35759507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 75
Target Start/End: Complemental strand, 43057567 - 43057508
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgactt 75  Q
    |||||||||||||| ||||||||||||||||| |||||||| || ||||||| |||||||    
T  43057567 atgcatcttcttttcggtagcccattccataagaactccacagttaagcgtgattgactt 43057508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 16 - 196
Target Start/End: Original strand, 2634568 - 2634748
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctc 115  Q
    |||||||||||||| | ||| | |||| |||| |||| ||| || || |||||||||||| ||| | | || |||||| ||||  |||| |||||||  |    
T  2634568 atgcatcttcttttcgatagtctattcaataagaacttcactgttaaacgtgcttgacttggagtagtctttggatggatgacattctgggaagttttcc 2634667  T
Q  116 aaaaagcgtgtgaatgataataaaacacgctgaaaagactcatgtttatttgttgggtcattcagtaatacttaaagtcat 196  Q
    ||||||| || ||||||  || || |||||||||||||||| ||||| |||||  ||||| |||  | | |||||||||||    
T  2634668 aaaaagcatgcgaatgaggatgaagcacgctgaaaagactcttgtttgtttgtaaggtcagtcatcattgcttaaagtcat 2634748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 93
Target Start/End: Complemental strand, 31822710 - 31822630
Alignment:
Q  13 aatatgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatgg 93  Q
    ||||||||||||||||| |||||| || |||| || |||||||| || ||||||  ||||||| || ||||||||||||||    
T  31822710 aatatgcatcttcttttcggtagctcaatccaaaagaactccacagttaagcgtttttgacttggaacaattttgggatgg 31822630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 75
Target Start/End: Original strand, 12728094 - 12728153
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgactt 75  Q
    |||||||||||||| |||||| |||||||||| |||||||| || |||| ||||||||||    
T  12728094 atgcatcttcttttcggtagcacattccataagaactccacagttaagcatgcttgactt 12728153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 113
Target Start/End: Original strand, 12883626 - 12883723
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttc 113  Q
    |||||| |||||||||||||| |||||||||| |||||||| || ||| ||| |||||||  || | |||| |||||| |||||  ||| ||||||||    
T  12883626 atgcattttctttttggtagctcattccataaaaactccacagttaagtgtgtttgacttgaagtagtttttggatggatgacctactgggaagtttc 12883723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 56
Target Start/End: Original strand, 2328417 - 2328457
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccac 56  Q
    ||||||||||||||||||||| |||||||||| ||||||||    
T  2328417 atgcatcttctttttggtagcacattccataagaactccac 2328457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 113
Target Start/End: Original strand, 2739621 - 2739721
Alignment:
Q  13 aatatgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagttt 112  Q
    |||||| |||||||||||  ||| | ||||||||| |||| || ||| ||| ||| ||||||| |||||||||||  |||| ||||| ||||| ||||||    
T  2739621 aatatgtatcttcttttttatagtctattccataagaacttcatggttaagtgtgtttgactttgagcaattttgatatggatgaccttctgaaaagttt 2739720  T
Q  113 c 113  Q
    |    
T  2739721 c 2739721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 114
Target Start/End: Original strand, 16907339 - 16907434
Alignment:
Q  19 catcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttct 114  Q
    |||||||||||  || | |||||| | || |||||||  || ||||||| ||||||| ||||||||||| ||||| ||||| | ||||||||||||    
T  16907339 catcttcttttcagtggtccattctacaagaactccatagttaagcgtgtttgacttggagcaattttgagatgggtgaccttttgagaagtttct 16907434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 75
Target Start/End: Complemental strand, 30872994 - 30872935
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgactt 75  Q
    |||||||||||||||||||| |||||| |||| ||||||||  | |||| ||||||||||    
T  30872994 atgcatcttctttttggtagtccattctataagaactccacaattaagcatgcttgactt 30872935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 75
Target Start/End: Complemental strand, 35010019 - 35009981
Alignment:
Q  37 ccattccataataactccacggtcaagcgtgcttgactt 75  Q
    ||||||||||| ||||||||||| |||||||||||||||    
T  35010019 ccattccataagaactccacggttaagcgtgcttgactt 35009981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 113
Target Start/End: Original strand, 7548193 - 7548290
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttc 113  Q
    |||||| |||||||||||||||||||  |||| ||||||||  | |||||| |||||||| ||| | | || |||||| |||||  | ||||||||||    
T  7548193 atgcatattctttttggtagcccatttgataagaactccacaattaagcgtacttgacttggagtagtctttggatgggtgacctaccgagaagtttc 7548290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 92
Target Start/End: Original strand, 2635026 - 2635102
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatg 92  Q
    |||||||||||||| |||||| ||||| |||| |||||||| || ||||||| ||| ||| ||| ||| || |||||    
T  2635026 atgcatcttcttttcggtagctcattcaataagaactccacagttaagcgtgtttggcttggagtaatctttggatg 2635102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 92
Target Start/End: Complemental strand, 16440623 - 16440547
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatg 92  Q
    |||||| |||||||||||||| ||||| ||||||||| ||  || ||| ||| ||||||   |||||||||||||||    
T  16440623 atgcatattctttttggtagctcattctataataacttcaaagttaagtgtgattgactcgaagcaattttgggatg 16440547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 56
Target Start/End: Complemental strand, 20061235 - 20061195
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccac 56  Q
    |||||||||||||| |||||| |||||||||| ||||||||    
T  20061235 atgcatcttcttttcggtagctcattccataagaactccac 20061195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 48
Target Start/End: Complemental strand, 31823128 - 31823096
Alignment:
Q  16 atgcatcttctttttggtagcccattccataat 48  Q
    ||||||||||||||||||||| |||||||||||    
T  31823128 atgcatcttctttttggtagctcattccataat 31823096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 63; Significance: 2e-27; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 194
Target Start/End: Complemental strand, 29680151 - 29679973
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctc 115  Q
    |||||||||||||||||||||||||| ||||| |||||||| || ||||||| ||||||| ||| | | || |||||| ||||| || |||||||||| |    
T  29680151 atgcatcttctttttggtagcccattacataagaactccacagttaagcgtgtttgacttggagtagtctttggatgggtgaccttccgagaagtttccc 29680052  T
Q  116 aaaaagcgtgtgaatgataataaaacacgctgaaaagactcatgtttatttgttgggtcattcagtaatacttaaagtc 194  Q
     | |||||||  |||||  | |||||||||||||||||||| ||||  ||||| |||||| || | ||| |||||||||    
T  29680051 gataagcgtgcaaatgaggacaaaacacgctgaaaagactcgtgttggtttgtagggtcagtcggcaatgcttaaagtc 29679973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 16 - 175
Target Start/End: Complemental strand, 8391366 - 8391207
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctc 115  Q
    |||||||||||||| ||||||  ||||||||| |||||||  || ||||||||||||||| ||||||||||||||||| |||||  | | ||||||||||    
T  8391366 atgcatcttcttttcggtagctaattccataagaactccatagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttctc 8391267  T
Q  116 aaaaagcgtgtgaatgataataaaacacgctgaaaagactcatgtttatttgttgggtca 175  Q
     | || |||| || |||  | |||||||||||| ||||||| |||| |||||| ||||||    
T  8391266 gataaacgtgcgagtgaggacaaaacacgctgagaagactcgtgttgatttgtggggtca 8391207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 16 - 175
Target Start/End: Original strand, 34371714 - 34371873
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctc 115  Q
    |||||||||||||| |||||| |||||||||| ||| |||| || ||||||||||||||| ||||||||||||||||| |||||  ||| |||||||| |    
T  34371714 atgcatcttcttttcggtagctcattccataagaacaccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctactgggaagtttccc 34371813  T
Q  116 aaaaagcgtgtgaatgataataaaacacgctgaaaagactcatgtttatttgttgggtca 175  Q
       ||||||| || |||  | |||||||| ||||||||||| ||||  ||||| ||||||    
T  34371814 ggtaagcgtgcgagtgaggacaaaacacgttgaaaagactcgtgttggtttgtggggtca 34371873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 16 - 174
Target Start/End: Original strand, 1822008 - 1822166
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctc 115  Q
    |||||||||||||||||||||||||||||||| ||||||||  | ||||||||||||||| ||| | | || |||||| |||||  | | |||||||| |    
T  1822008 atgcatcttctttttggtagcccattccataagaactccacatttaagcgtgcttgacttggagtagtctttggatgggtgacctaccgggaagtttccc 1822107  T
Q  116 aaaaagcgtgtgaatgataataaaacacgctgaaaagactcatgtttatttgttgggtc 174  Q
       ||||||||||||||  | |||||||||||||||||||| ||||  ||||| |||||    
T  1822108 ggtaagcgtgtgaatgaggacaaaacacgctgaaaagactcgtgttggtttgtagggtc 1822166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 16 - 174
Target Start/End: Complemental strand, 10927447 - 10927289
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctc 115  Q
    |||||||||||||||||||||||||||||||| |||||||| || || |||||||||||| ||| | | || |||||| |||||  | | ||||||| ||    
T  10927447 atgcatcttctttttggtagcccattccataagaactccacagttaaacgtgcttgacttggagtagtctttggatgggtgaccgaccgggaagtttttc 10927348  T
Q  116 aaaaagcgtgtgaatgataataaaacacgctgaaaagactcatgtttatttgttgggtc 174  Q
       ||||||||||||||  | |||||||||||||||||||| ||||  ||||| |||||    
T  10927347 ggtaagcgtgtgaatgaggacaaaacacgctgaaaagactcgtgttggtttgtagggtc 10927289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 99
Target Start/End: Original strand, 2193918 - 2194001
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgacc 99  Q
    |||||||||||||| |||||| |||||||||| |||||||| || ||||||||||||||| ||||||||||||||||| |||||    
T  2193918 atgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacc 2194001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 99
Target Start/End: Original strand, 2474061 - 2474144
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgacc 99  Q
    |||||||||||||| |||||| |||||||||| |||||||| || ||||||||||||||| ||||||||||||||||| |||||    
T  2474061 atgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacc 2474144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 175
Target Start/End: Complemental strand, 3886645 - 3886486
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctc 115  Q
    |||||||||||||| |||||| |||||||||| |||||||| || ||||||| ||||| | |||||||||| |||||| |||||  | | |||||||| |    
T  3886645 atgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgtttgacgtggagcaatttttggatgggtgacctaccgggaagtttccc 3886546  T
Q  116 aaaaagcgtgtgaatgataataaaacacgctgaaaagactcatgtttatttgttgggtca 175  Q
    |  ||||||| || |||  | |||||||||||||||||||| ||||  ||||| ||||||    
T  3886545 agtaagcgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtca 3886486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 175
Target Start/End: Complemental strand, 3887101 - 3886942
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctc 115  Q
    |||||||||||||| |||| | |||||||||| |||| ||| || ||||||||||||||| |||||||||| |||||| |||||  ||| |||||||| |    
T  3887101 atgcatcttcttttcggtaactcattccataagaacttcacagttaagcgtgcttgacttggagcaatttttggatgggtgacctactgggaagtttccc 3887002  T
Q  116 aaaaagcgtgtgaatgataataaaacacgctgaaaagactcatgtttatttgttgggtca 175  Q
    |  ||||||| || |||  | |||||||||||| ||||||| ||||  ||||| ||||||    
T  3887001 agtaagcgtgcgagtgaggacaaaacacgctgacaagactcgtgttggtttgtggggtca 3886942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 175
Target Start/End: Complemental strand, 8642078 - 8641920
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctc 115  Q
    |||||||||||||| |||||| |||||||||| |||||||| || ||||||||||||||| ||||||||||  ||||| ||||| |  | ||||||||||    
T  8642078 atgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttaagatgggtgacc-tacgggaagtttctc 8641980  T
Q  116 aaaaagcgtgtgaatgataataaaacacgctgaaaagactcatgtttatttgttgggtca 175  Q
       ||||||| || |||  | |||||||||||||||||||| ||||  ||||| ||||||    
T  8641979 ggtaagcgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtca 8641920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 175
Target Start/End: Complemental strand, 17445499 - 17445340
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctc 115  Q
    |||||||||||| | |||||| |||||||||| || ||||| || ||||||||||||||| ||||||||||||||||| |||||  | | |||||||| |    
T  17445499 atgcatcttcttatcggtagctcattccataagaaatccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttccc 17445400  T
Q  116 aaaaagcgtgtgaatgataataaaacacgctgaaaagactcatgtttatttgttgggtca 175  Q
       ||||||| || |||  | |||||||||||||||||||| ||||  ||||| ||||||    
T  17445399 ggtaagcgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtca 17445340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 16 - 99
Target Start/End: Original strand, 2474507 - 2474590
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgacc 99  Q
    |||||||||||||| |||||| |||||||||| |||||||| || ||||||||||||||| ||||||||||| ||||| |||||    
T  2474507 atgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttgagatgggtgacc 2474590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 16 - 154
Target Start/End: Complemental strand, 42788690 - 42788552
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctc 115  Q
    |||||||||||||| |||||| ||||||| || |||||||| || ||||||||||||||| ||||||||||||||| | |||||  | | ||||||||||    
T  42788690 atgcatcttcttttcggtagctcattccacaagaactccacagttaagcgtgcttgacttggagcaattttgggataggtgacctaccgggaagtttctc 42788591  T
Q  116 aaaaagcgtgtgaatgataataaaacacgctgaaaagac 154  Q
       |||| || || |||  | ||||||||||||||||||    
T  42788590 ggtaagcttgcgagtgaggacaaaacacgctgaaaagac 42788552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 113
Target Start/End: Complemental strand, 21886190 - 21886093
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttc 113  Q
    |||||||||||||| |||||| |||||||||| |||||||  || ||| ||||||||||| ||||||||||||||||| |||||  ||| ||||||||    
T  21886190 atgcatcttcttttcggtagctcattccataagaactccaaagttaagtgtgcttgacttggagcaattttgggatgggtgacctactgggaagtttc 21886093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 125
Target Start/End: Complemental strand, 30684600 - 30684491
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctc 115  Q
    |||||||||||||| |||||  ||  |||||| |||||||| || |||||||||  |||| ||||||||||||||||| ||||| ||||| |||||||||    
T  30684600 atgcatcttcttttcggtaggtcaaaccataagaactccacagttaagcgtgctcaacttggagcaattttgggatgggtgaccttctgaaaagtttctc 30684501  T
Q  116 aaaaagcgtg 125  Q
     |||||||||    
T  30684500 gaaaagcgtg 30684491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 161
Target Start/End: Original strand, 34372170 - 34372315
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctc 115  Q
    |||||||||||||| |||||| |||||||||| |||| ||| || ||||||||||||||| ||||||||||||||| | |||||  | | |||||||  |    
T  34372170 atgcatcttcttttcggtagctcattccataagaacttcacagttaagcgtgcttgacttggagcaattttgggattggtgacctaccgggaagttttcc 34372269  T
Q  116 aaaaagcgtgtgaatgataataaaacacgctgaaaagactcatgtt 161  Q
     | ||||||| || |||  | ||||||||||||||| |||| ||||    
T  34372270 gataagcgtgcgagtgaggaaaaaacacgctgaaaatactcgtgtt 34372315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 189174 - 189253
Alignment:
Q  20 atcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgacc 99  Q
    |||||||||| |||||| |||||||||| |||||||| || |||| |||||||||| ||||||||||||||||| |||||    
T  189174 atcttcttttcggtagctcattccataagaactccacagttaagcatgcttgacttggagcaattttgggatgggtgacc 189253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 75
Target Start/End: Original strand, 39147041 - 39147100
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgactt 75  Q
    |||||||||||||||||||||||||||||||| |||||||| || |||||||||||||||    
T  39147041 atgcatcttctttttggtagcccattccataagaactccacagttaagcgtgcttgactt 39147100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 16 - 161
Target Start/End: Complemental strand, 27646879 - 27646734
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctc 115  Q
    |||||||||||||||||||||||||| ||||| |||||||| || ||||||||||| ||| ||| | | || | |||| |||||  | | |||||||| |    
T  27646879 atgcatcttctttttggtagcccatttcataagaactccacagttaagcgtgcttgtcttggagtagtctttgcatgggtgacctaccgggaagtttccc 27646780  T
Q  116 aaaaagcgtgtgaatgataataaaacacgctgaaaagactcatgtt 161  Q
    || || |||| || |||  | |||||| ||||||||||||||||||    
T  27646779 aataaacgtgcgagtgaggacaaaacatgctgaaaagactcatgtt 27646734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 99
Target Start/End: Complemental strand, 15513056 - 15512973
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgacc 99  Q
    ||||||||||||||||||| | |||||||||| ||||||||  | || ||||||||||||  |||||||||||||||| |||||    
T  15513056 atgcatcttctttttggtatctcattccataagaactccacaattaaacgtgcttgacttgaagcaattttgggatggatgacc 15512973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 175
Target Start/End: Original strand, 18304533 - 18304692
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctc 115  Q
    |||||| ||||||| |||||| |||||||||| || ||||| || |||| || ||||||| ||||||||||| ||||| ||||| | ||||||||||| |    
T  18304533 atgcatattcttttcggtagctcattccataagaattccacagttaagcatgtttgacttggagcaattttgtgatgggtgaccttttgagaagtttcac 18304632  T
Q  116 aaaaagcgtgtgaatgataataaaacacgctgaaaagactcatgtttatttgttgggtca 175  Q
    | |||  ||| || |||  | ||||||||||||| | |||| |||| |||| | ||||||    
T  18304633 agaaattgtgcgagtgaggacaaaacacgctgaacaaactcgtgttgatttctggggtca 18304692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 199
Target Start/End: Complemental strand, 18750240 - 18750057
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctc 115  Q
    |||||||||||||| ||||||  ||||||||| |||||||   | || ||| |||||||| |||||||||| |||||| ||||| |||  ||||||| |     
T  18750240 atgcatcttcttttcggtagcttattccataagaactccataattaatcgtacttgacttggagcaattttaggatgggtgaccttctaggaagtttttt 18750141  T
Q  116 aaaaagcgtgtgaatgataataaaacacgctgaaaagactcatgtttatttgttgggtcattcagtaatacttaaagtcatatg 199  Q
    | |||| ||| || |||  | ||||||| ||||||||||||  |||  ||||| |||||| |||  ||||||||||||| ||||    
T  18750140 agaaagtgtgcgagtgaggacaaaacacactgaaaagactcgagttggtttgtggggtcagtcaacaatacttaaagtcgtatg 18750057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 153
Target Start/End: Complemental strand, 24182289 - 24182153
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctc 115  Q
    |||||||||||||  |||| ||||  |||||||||||  || || ||||||| ||||||| ||||||||||||||||| ||||| ||| | |||||||||    
T  24182289 atgcatcttctttc-ggtaccccaaaccataataacttaacagttaagcgtggttgacttggagcaattttgggatgggtgaccttctaaaaagtttctc 24182191  T
Q  116 aaaaagcgtgtgaatgataataaaacacgctgaaaaga 153  Q
      |||| ||| || |||  |||||||||| ||||||||    
T  24182190 ggaaagtgtgcgagtgaggataaaacacgttgaaaaga 24182153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 69 - 153
Target Start/End: Complemental strand, 16370702 - 16370618
Alignment:
Q  69 ttgacttagagcaattttgggatggctgaccatctgagaagtttctcaaaaagcgtgtgaatgataataaaacacgctgaaaaga 153  Q
    ||||||| ||||||||||||||||| ||||  ||||| |||||||||| |||||||| ||||||  | ||||||| |||||||||    
T  16370702 ttgacttggagcaattttgggatgggtgacattctgaaaagtttctcataaagcgtgcgaatgaggaaaaaacacactgaaaaga 16370618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 175
Target Start/End: Original strand, 22557071 - 22557231
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctc 115  Q
    |||||||||||||| |||||| |||||  ||| |||| ||| || |||||||| |||||| ||||||||||||||||| |||||  | | |||||||| |    
T  22557071 atgcatcttcttttcggtagctcattctttaagaacttcacagttaagcgtgcctgacttggagcaattttgggatgggtgacctaccgggaagtttccc 22557170  T
Q  116 aaaaagcgtgtgaatgataataaaacacgctg-aaaagactcatgtttatttgttgggtca 175  Q
       ||||||| || |||  | ||||||||||| ||||||||| ||||  ||||| ||||||    
T  22557171 ggtaagcgtgcgagtgaggacaaaacacgctgtaaaagactcgtgttggtttgtagggtca 22557231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 99
Target Start/End: Complemental strand, 11757325 - 11757242
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgacc 99  Q
    |||||||||||||| |||||  || ||||||| |||||||| || |||||||||||||||| |||||||| | ||||| |||||    
T  11757325 atgcatcttcttttcggtagttcaatccataagaactccacagttaagcgtgcttgacttacagcaatttcgagatgggtgacc 11757242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 27 - 170
Target Start/End: Complemental strand, 20039508 - 20039365
Alignment:
Q  27 ttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctcaaaaagcgtgt 126  Q
    ||||||||||||||||||||| ||||| || || ||| ||||||||||||||| | | || |||| | |||||   || |||||||| |   |||||||     
T  20039508 ttttggtagcccattccataagaactctacagttaagtgtgcttgacttagagtagtctttggattggtgacctattgggaagtttcccggtaagcgtgc 20039409  T
Q  127 gaatgataataaaacacgctgaaaagactcatgtttatttgttg 170  Q
    || |||  | |||||||||||||||||||||||||  |||||||    
T  20039408 gagtgaggacaaaacacgctgaaaagactcatgttggtttgttg 20039365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 91
Target Start/End: Original strand, 34867892 - 34867967
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggat 91  Q
    |||||||||||||| |||||| |||| ||||| |||||||  || |||||||||| |||| |||||||||||||||    
T  34867892 atgcatcttcttttcggtagctcatttcataagaactccatagttaagcgtgcttaactttgagcaattttgggat 34867967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 16 - 175
Target Start/End: Original strand, 22556638 - 22556798
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctc 115  Q
    |||||||||||||| |||||| |||||  ||| |||| ||| || |||||||  |||||| ||||||||||||||||| |||||  |   ||||||||||    
T  22556638 atgcatcttcttttcggtagctcattctttaagaacttcacagttaagcgtggctgacttggagcaattttgggatgggtgacctaccaggaagtttctc 22556737  T
Q  116 aaaaagcgtgtgaatgataataaaacacgctg-aaaagactcatgtttatttgttgggtca 175  Q
       ||||||| || |||  | ||||||||||| ||||||||| ||||  ||||| ||||||    
T  22556738 ggtaagcgtgcgagtgaggacaaaacacgctgtaaaagactcgtgttggtttgtagggtca 22556798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 75
Target Start/End: Complemental strand, 10926990 - 10926931
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgactt 75  Q
    |||||||||| ||||||||| ||||||||||| |||||||| || || ||||||||||||    
T  10926990 atgcatcttccttttggtagtccattccataagaactccacagttaaacgtgcttgactt 10926931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 26 - 112
Target Start/End: Original strand, 4102908 - 4102994
Alignment:
Q  26 tttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagttt 112  Q
    |||| |||||||||  |||||| |||| ||| || || |||||||||||| ||||||||||| ||||  ||||| ||||||||||||    
T  4102908 ttttcggtagcccaaaccataagaacttcacagttaaacgtgcttgacttggagcaattttgagatgagtgaccttctgagaagttt 4102994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 92
Target Start/End: Original strand, 5785964 - 5786023
Alignment:
Q  33 tagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatg 92  Q
    ||||||||||||||| ||||| ||| | ||||||| ||||||| |||||||||| |||||    
T  5785964 tagcccattccataagaactctacgcttaagcgtgtttgacttggagcaattttaggatg 5786023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 175
Target Start/End: Complemental strand, 30719849 - 30719690
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctc 115  Q
    |||||||||||||| |||||  ||  |||||| ||||||||  | |||||||||  |||| |||||||||||||| || ||||  ||| | ||||||||     
T  30719849 atgcatcttcttttcggtaggtcaaaccataagaactccacaattaagcgtgctcaacttggagcaattttgggacgggtgacattctaaaaagtttctt 30719750  T
Q  116 aaaaagcgtgtgaatgataataaaacacgctgaaaagactcatgtttatttgttgggtca 175  Q
     ||||||||| ||  || || ||||||  || ||||||||| | || |||||| ||||||    
T  30719749 gaaaagcgtgcgagagagaacaaaacatactaaaaagactcgtattaatttgtggggtca 30719690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 86
Target Start/End: Complemental strand, 32574702 - 32574632
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaatttt 86  Q
    |||||||||  |||||||||||||  | ||||||||| ||  || ||||||||||||||| ||||||||||    
T  32574702 atgcatctttcttttggtagcccaaactataataacttcatagttaagcgtgcttgacttggagcaatttt 32574632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 52
Target Start/End: Complemental strand, 4658037 - 4658001
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataact 52  Q
    |||||||||||||||||||| ||||||||||| ||||    
T  4658037 atgcatcttctttttggtagtccattccataagaact 4658001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 93
Target Start/End: Original strand, 42429244 - 42429324
Alignment:
Q  13 aatatgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatgg 93  Q
    ||||||||| |||||||  ||||||| || ||||| |||| ||  || ||| |||||||||||| ||||||||||| ||||    
T  42429244 aatatgcatattcttttccgtagcccgttacataagaacttcatagttaagggtgcttgacttaaagcaattttggaatgg 42429324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 16 - 161
Target Start/End: Original strand, 1322 - 1467
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctc 115  Q
    |||||||||||||| |||||| |||||||||| |||||||| || ||||||||||||||| ||||||||||||||||| |||||  | | |||||||| |    
T  1322 atgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttccc 1421  T
Q  116 aaaaagcgtgtgaatgataataaaacacgctgaaaagactcatgtt 161  Q
       ||||||| || |||  | |||||||||||||||||||| ||||    
T  1422 ggtaagcgtgcgagtgaggacaaaacacgctgaaaagactcgtgtt 1467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0322 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0322
Description:

Target: scaffold0322; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 19 - 175
Target Start/End: Original strand, 19071 - 19227
Alignment:
Q  19 catcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctcaaa 118  Q
    ||||||||||| |||||| |||| ||||| |||||||| || ||||||||||||||| ||||||||||||||||| |||||  | | |||||||| |       
T  19071 catcttcttttcggtagctcatttcataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcccggt 19170  T
Q  119 aagcgtgtgaatgataataaaacacgctgaaaagactcatgtttatttgttgggtca 175  Q
    |||||||||| |||  | |||||||||||||||||||| ||||  ||||| ||||||    
T  19171 aagcgtgtgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtca 19227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 61; Significance: 3e-26; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 16 - 175
Target Start/End: Original strand, 9352164 - 9352323
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgacc-atctgagaagtttct 114  Q
    |||||||||||||| |||||| |||||||||| |||||||| || ||||||||||||||| ||||||||||||||||| ||||| | ||| |||||||||    
T  9352164 atgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctacctg-gaagtttct 9352262  T
Q  115 caaaaagcgtgtgaatgataataaaacacgctgaaaagactcatgtttatttgttgggtca 175  Q
    |   ||||||| || |||  | |||||| ||||||||||||| ||||  ||||| ||||||    
T  9352263 cggtaagcgtgcgagtgaggacaaaacatgctgaaaagactcgtgttggtttgtggggtca 9352323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 16 - 175
Target Start/End: Original strand, 13492434 - 13492594
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctc 115  Q
    |||||||||||||| ||||||  ||||||||| |||||||| || ||||||||||||||| ||||||||||||||||| |||||  | | |||||||| |    
T  13492434 atgcatcttcttttcggtagctaattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttccc 13492533  T
Q  116 aaaaagcgtgtgaatga-taataaaacacgctgaaaagactcatgtttatttgttgggtca 175  Q
    |  ||||||| || |||  || |||||||||||||||||||| ||||  ||||| ||||||    
T  13492534 agtaagcgtgcgagtgaggaaaaaaacacgctgaaaagactcgtgttggtttgtggggtca 13492594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 19 - 175
Target Start/End: Complemental strand, 17027572 - 17027416
Alignment:
Q  19 catcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctcaaa 118  Q
    ||||||||||| |||||| |||| ||||| |||||||| || ||||||||||||||| ||||||||||||||||| |||||  | | |||||||| |       
T  17027572 catcttcttttcggtagctcatttcataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcccggt 17027473  T
Q  119 aagcgtgtgaatgataataaaacacgctgaaaagactcatgtttatttgttgggtca 175  Q
    |||||||||| |||  | |||||||||||||||||||| ||||  ||||| ||||||    
T  17027472 aagcgtgtgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtca 17027416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 16 - 99
Target Start/End: Original strand, 13492891 - 13492974
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgacc 99  Q
    |||||||||||||| |||||| |||||||||| |||||||| || ||||||||||||||||||||||||||||||||| |||||    
T  13492891 atgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttagagcaattttgggatgggtgacc 13492974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 16 - 175
Target Start/End: Original strand, 20850423 - 20850582
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctc 115  Q
    |||||||||||||| |||||| |||||||||| ||||| || || ||||||||||||||| ||||||||||||||||| |||||  | | |||||||| |    
T  20850423 atgcatcttcttttcggtagctcattccataagaactctacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttccc 20850522  T
Q  116 aaaaagcgtgtgaatgataataaaacacgctgaaaagactcatgtttatttgttgggtca 175  Q
       ||||||| || |||  | |||||||||||||||||||| ||||  ||||| ||||||    
T  20850523 ggtaagcgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtca 20850582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 16 - 175
Target Start/End: Complemental strand, 13191557 - 13191398
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctc 115  Q
    |||||||||||||| |||||| | |||||||| |||| ||| || ||||||||||||||| ||||||||||| ||||| |||||| | | |||||||| |    
T  13191557 atgcatcttcttttcggtagctcgttccataagaacttcacagttaagcgtgcttgacttggagcaattttgagatgggtgaccaaccgggaagtttccc 13191458  T
Q  116 aaaaagcgtgtgaatgataataaaacacgctgaaaagactcatgtttatttgttgggtca 175  Q
     | ||||||| || |||  | |||| || |||||||||||| ||||  ||||| ||||||    
T  13191457 gataagcgtgcgagtgaggacaaaatacactgaaaagactcgtgttggtttgtggggtca 13191398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 16 - 99
Target Start/End: Original strand, 16520070 - 16520153
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgacc 99  Q
    |||||||||||||| |||||| |||||||||| |||||||| || ||||||||||||||| ||||||||||| ||||| |||||    
T  16520070 atgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttgagatgggtgacc 16520153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 16 - 99
Target Start/End: Complemental strand, 20896732 - 20896649
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgacc 99  Q
    ||||||||||||||  ||||| |||||||||| ||||||||||| ||||||||||| ||| ||||||||||||||||| |||||    
T  20896732 atgcatcttcttttcagtagctcattccataagaactccacggttaagcgtgcttggcttggagcaattttgggatgggtgacc 20896649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 16 - 155
Target Start/End: Complemental strand, 23986361 - 23986222
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctc 115  Q
    |||||||||||||| |||||| ||  |||||| |||| ||| || ||| ||||||||||| ||||||||||||||||| ||||| |||| |||||||| |    
T  23986361 atgcatcttcttttcggtagctcaaaccataagaacttcacagttaagtgtgcttgacttggagcaattttgggatgggtgaccttctgggaagtttcac 23986262  T
Q  116 aaaaagcgtgtgaatgataataaaacacgctgaaaagact 155  Q
      |||||||| || |||  | || ||||||||||||||||    
T  23986261 ggaaagcgtgcgagtgaggagaagacacgctgaaaagact 23986222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 16 - 99
Target Start/End: Original strand, 28780212 - 28780295
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgacc 99  Q
    ||||||||| |||| |||||| |||||||||| |||||||| || ||||||||||||||| ||||||||||||||||| |||||    
T  28780212 atgcatcttgttttcggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacc 28780295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 161
Target Start/End: Original strand, 7912412 - 7912557
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctc 115  Q
    |||||| ||||||| |||||| |||||||||| |||||||  || || |||||||||||| |||||||||||| |||| |||||  ||| |||||||| |    
T  7912412 atgcattttcttttcggtagctcattccataagaactccatagttaaacgtgcttgacttggagcaattttggaatgggtgacctgctgggaagtttccc 7912511  T
Q  116 aaaaagcgtgtgaatgataataaaacacgctgaaaagactcatgtt 161  Q
       ||||||  || |||  | |||||||||||||||||||||||||    
T  7912512 gttaagcgtacgagtgaggacaaaacacgctgaaaagactcatgtt 7912557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 99
Target Start/End: Original strand, 7911980 - 7912063
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgacc 99  Q
    |||||||||||||| |||||| |||||||||| |||||||| || | || |||||||||| ||||||||||||||||| |||||    
T  7911980 atgcatcttcttttcggtagctcattccataagaactccacagttatgcttgcttgacttggagcaattttgggatgggtgacc 7912063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 75
Target Start/End: Original strand, 11062387 - 11062446
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgactt 75  Q
    |||||||||||||||||||||||||||||||| |||||||| || |||||||||||||||    
T  11062387 atgcatcttctttttggtagcccattccataagaactccacagttaagcgtgcttgactt 11062446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 16 - 133
Target Start/End: Complemental strand, 9440353 - 9440236
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctc 115  Q
    |||||| ||||||| |||||| || ||||||| |||| ||| || ||| |||||||| || |||||||||| |||||| ||||| | || |||||||||     
T  9440353 atgcattttcttttcggtagctcactccataagaacttcacagttaagtgtgcttgatttggagcaatttttggatgggtgaccttatgggaagtttcta 9440254  T
Q  116 aaaaagcgtgtgaatgat 133  Q
    ||||| ||||||||||||    
T  9440253 aaaaaacgtgtgaatgat 9440236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 128
Target Start/End: Original strand, 15929684 - 15929796
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctc 115  Q
    |||||||||||||| |||||| |||||||||| |||||||| || ||||||| || || |  |||||||||||||||| ||||| | |  |||||||| |    
T  15929684 atgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgtttaacatgaagcaattttgggatgggtgaccttttatgaagtttccc 15929783  T
Q  116 aaaaagcgtgtga 128  Q
    | ||||| |||||    
T  15929784 ataaagcatgtga 15929796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 175
Target Start/End: Complemental strand, 2890883 - 2890724
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctc 115  Q
    |||| |||||||||  |||||||||||||||| |||||||| || |||||||||||||||  |  | |  | |||||| |||||  |||||||||||| |    
T  2890883 atgcttcttcttttcagtagcccattccataagaactccacagttaagcgtgcttgacttgaaatagtactaggatgggtgacctactgagaagtttccc 2890784  T
Q  116 aaaaagcgtgtgaatgataataaaacacgctgaaaagactcatgtttatttgttgggtca 175  Q
     | ||||||| || |||  | |||||||||| ||||||||| ||||  ||||| ||||||    
T  2890783 gataagcgtgcgagtgaggacaaaacacgctaaaaagactcgtgttggtttgtagggtca 2890724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 75
Target Start/End: Original strand, 17851020 - 17851079
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgactt 75  Q
    ||||||||||||| ||||||||||||| |||| |||||||| || |||||||||||||||    
T  17851020 atgcatcttctttctggtagcccattctataagaactccacagttaagcgtgcttgactt 17851079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 75
Target Start/End: Original strand, 17851476 - 17851535
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgactt 75  Q
    ||||||||||||||||||||||||||| |||| ||||||||  | |||||||||||||||    
T  17851476 atgcatcttctttttggtagcccattctataagaactccacaattaagcgtgcttgactt 17851535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 26 - 161
Target Start/End: Complemental strand, 28065869 - 28065735
Alignment:
Q  26 tttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctcaaaaagcgtg 125  Q
    |||||||||||  ||||||||| ||||||||  | |||| || ||||||| ||||| ||||| ||||| | ||| |  |||||||||| | |||||||||    
T  28065869 tttttggtagcttattccataagaactccacaattaagcatgtttgactttgagcagttttgtgatgggtaacctttcgagaagtttc-cgaaaagcgtg 28065771  T
Q  126 tgaatgataataaaacacgctgaaaagactcatgtt 161  Q
    |||||||| | |||||||||| ||||  ||||||||    
T  28065770 tgaatgatgacaaaacacgctaaaaaatctcatgtt 28065735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 13 - 75
Target Start/End: Complemental strand, 6330959 - 6330897
Alignment:
Q  13 aatatgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgactt 75  Q
    ||||||||||||||||| |||||| |||| ||||| |||||||| || |||||||||||||||    
T  6330959 aatatgcatcttcttttcggtagctcatttcataagaactccacagttaagcgtgcttgactt 6330897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 93
Target Start/End: Complemental strand, 2681260 - 2681183
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatgg 93  Q
    |||||||||||||| |||||| |||||||||| ||||||||  | |||||||||| | || || ||||||||||||||    
T  2681260 atgcatcttcttttcggtagctcattccataagaactccacaattaagcgtgcttaatttggaacaattttgggatgg 2681183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 113
Target Start/End: Original strand, 23776543 - 23776639
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttc 113  Q
    |||||||||||||| |||||| |||| ||||| |||| |||  | |||||| |||||||| ||||||||||||||||| |||||  ||| ||||||||    
T  23776543 atgcatcttcttttcggtagctcatttcataagaacttcacatt-aagcgtacttgacttggagcaattttgggatggatgacctactgggaagtttc 23776639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 87
Target Start/End: Complemental strand, 17731153 - 17731082
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttg 87  Q
    |||||||||||||| |||||| |||||  ||| ||||||||  | ||||||||||||||| |||||||||||    
T  17731153 atgcatcttcttttcggtagctcattctttaagaactccacatttaagcgtgcttgacttggagcaattttg 17731082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 75
Target Start/End: Complemental strand, 20126226 - 20126167
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgactt 75  Q
    ||||||||||||||||||||| |||||||||| || |||||  | |||||||||||||||    
T  20126226 atgcatcttctttttggtagcacattccataagaattccacaattaagcgtgcttgactt 20126167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 26 - 156
Target Start/End: Complemental strand, 2720597 - 2720467
Alignment:
Q  26 tttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctcaaaaagcgtg 125  Q
    ||||||||||| |||||||||| |||||||| || ||| ||||||||||| ||| | | || |||||| ||||    || |||||||| | | |||||||    
T  2720597 tttttggtagctcattccataagaactccacagttaagtgtgcttgacttggagtagtctttggatgggtgacatattgggaagtttcccgataagcgtg 2720498  T
Q  126 tgaatgataataaaacacgctgaaaagactc 156  Q
     || ||| || |||||||||||| |||||||    
T  2720497 cgagtgagaacaaaacacgctgagaagactc 2720467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 13 - 75
Target Start/End: Original strand, 20732677 - 20732739
Alignment:
Q  13 aatatgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgactt 75  Q
    ||||||||| ||||||| |||||||||||| |||| ||||| ||||| ||| |||||||||||    
T  20732677 aatatgcatattcttttcggtagcccattcaataaaaactctacggttaagagtgcttgactt 20732739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 113
Target Start/End: Complemental strand, 9440901 - 9440804
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttc 113  Q
    |||||| |||||||  ||||||||  |||||| |||| ||| || ||| ||| ||||||| ||||||||||||||||| ||||| |||  ||||||||    
T  9440901 atgcattttcttttcagtagcccaaaccataagaacttcacagttaagtgtgtttgactttgagcaattttgggatgggtgaccttcttggaagtttc 9440804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 81
Target Start/End: Original strand, 21312073 - 21312138
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagca 81  Q
    |||||||||||||||||||||||||| ||||| || ||||  || || |||||||||||| |||||    
T  21312073 atgcatcttctttttggtagcccatttcataagaaatccatagttaaacgtgcttgacttggagca 21312138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 75
Target Start/End: Original strand, 21311620 - 21311676
Alignment:
Q  19 catcttctttttggtagcccattccataataactccacggtcaagcgtgcttgactt 75  Q
    |||||||||||||| ||| |||||||||| |||||| | || |||||||||||||||    
T  21311620 catcttctttttggaagctcattccataagaactccgcagttaagcgtgcttgactt 21311676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 112
Target Start/End: Complemental strand, 33775046 - 33774950
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagttt 112  Q
    |||||||||||||||| ||| ||||||||||| |||||||| || ||| ||| |||||||  || | | || |||||| |||||  |||||||||||    
T  33775046 atgcatcttctttttgatagtccattccataagaactccacagttaagtgtgtttgacttgcagtagtctttggatgggtgacctactgagaagttt 33774950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 56
Target Start/End: Complemental strand, 2891343 - 2891297
Alignment:
Q  10 aagaatatgcatcttctttttggtagcccattccataataactccac 56  Q
    ||||| |||||||||  ||||||||||||||||||||| ||||||||    
T  2891343 aagaagatgcatctttgttttggtagcccattccataaaaactccac 2891297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 93
Target Start/End: Original strand, 17205451 - 17205517
Alignment:
Q  27 ttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatgg 93  Q
    ||||||||||||||||||||| |||||||  || || | ||||||| || ||| |||||||||||||    
T  17205451 ttttggtagcccattccataagaactccattgttaaacatgcttgatttggagtaattttgggatgg 17205517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 56
Target Start/End: Original strand, 3652588 - 3652628
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccac 56  Q
    ||||||||||||||||||||  |||||||||| ||||||||    
T  3652588 atgcatcttctttttggtagttcattccataagaactccac 3652628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 153
Target Start/End: Complemental strand, 31416107 - 31415995
Alignment:
Q  41 tccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctcaaaaagcgtgtgaatgataataaaa 140  Q
    ||||||| ||||||||  | ||||||| ||||||||||  | |||||||||||  || | | ||  ||||||||| |||| ||||||| |||  | ||||    
T  31416107 tccataagaactccacaattaagcgtgtttgacttagattagttttgggatggacgatcttatggaaagtttctcgaaaaacgtgtgagtgaggacaaaa 31416008  T
Q  141 cacgctgaaaaga 153  Q
    |||||||||||||    
T  31416007 cacgctgaaaaga 31415995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 61; Significance: 3e-26; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 16 - 168
Target Start/End: Original strand, 27026605 - 27026756
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctc 115  Q
    ||||||||| |||||||||||||||||||||| |||| |   || |||||||||||||||  ||||||||||||| || ||||| |||  |||||||  |    
T  27026605 atgcatctt-tttttggtagcccattccataagaactacgtagttaagcgtgcttgacttgaagcaattttgggaagggtgaccttctaggaagtttacc 27026703  T
Q  116 aaaaagcgtgtgaatgataataaaacacgctgaaaagactcatgtttatttgt 168  Q
    ||||||||||||| |||  | |||||||||||||||||||| ||||| |||||    
T  27026704 aaaaagcgtgtgactgaggaaaaaacacgctgaaaagactcgtgtttgtttgt 27026756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 16 - 175
Target Start/End: Complemental strand, 23350321 - 23350162
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctc 115  Q
    |||||||||||||| |||||| | |||||||| |||| ||  || ||||||||||||||| ||||||||||||||||| |||||  | ||||||||||||    
T  23350321 atgcatcttcttttcggtagctccttccataagaacttcatagttaagcgtgcttgacttggagcaattttgggatggatgacctaccgagaagtttctc 23350222  T
Q  116 aaaaagcgtgtgaatgataataaaacacgctgaaaagactcatgtttatttgttgggtca 175  Q
       |||||||||| |||  | ||||||| |||||||||||| ||||  ||||| ||||||    
T  23350221 tgtaagcgtgtgagtgaggacaaaacacactgaaaagactcgtgttggtttgtggggtca 23350162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 113
Target Start/End: Complemental strand, 12692037 - 12691940
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttc 113  Q
    |||||||||||||| |||||| |||||||||| |||||||| || ||||||||||||||| ||||||||||||||||| |||||  ||| ||||||||    
T  12692037 atgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctactgggaagtttc 12691940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 16 - 196
Target Start/End: Original strand, 4185817 - 4185995
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctc 115  Q
    ||||||||||||||||||||| ||||| | || ||||| || || |||  |||||||||| ||||||||||||||| | ||||| | || ||| ||||||    
T  4185817 atgcatcttctttttggtagctcattctacaagaactctacagttaagtatgcttgacttggagcaattttgggataggtgaccttatgcgaaatttctc 4185916  T
Q  116 aaaaagcgtgtgaatgataataaaacacgctgaaaagactcatgtttatttgttgggtcattcagtaatacttaaagtcat 196  Q
     ||||||||||||||||  | ||||||| || ||||||||  |||| ||||| ||||||| |||  |||||||||||||||    
T  4185917 gaaaagcgtgtgaatgaggacaaaacacactaaaaagact-gtgttaatttg-tgggtcagtcaacaatacttaaagtcat 4185995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 175
Target Start/End: Complemental strand, 23943280 - 23943121
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctc 115  Q
    ||||||||||||||||||||| |||||||||| |||||||| || ||||||||||||||| ||| | | || |||||| |||||| | | |||||||| |    
T  23943280 atgcatcttctttttggtagcacattccataagaactccacagttaagcgtgcttgacttggagtagtctttggatgggtgaccaaccgggaagtttccc 23943181  T
Q  116 aaaaagcgtgtgaatgataataaaacacgctgaaaagactcatgtttatttgttgggtca 175  Q
       ||||||| || |||  | |||||||||||||||||||| ||||  ||||| ||||||    
T  23943180 ggtaagcgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtagggtca 23943121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 99
Target Start/End: Complemental strand, 50814863 - 50814780
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgacc 99  Q
    |||||||||||||| |||||| |||||||||| |||||||| || ||||||||||||||| ||||||||||||||||| |||||    
T  50814863 atgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatggatgacc 50814780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 161
Target Start/End: Complemental strand, 4127927 - 4127782
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctc 115  Q
    |||||||||||||| ||||||| ||||||||| |||| ||  || ||||||||||| ||||||||||||||||||||| |||||  | || ||||||  |    
T  4127927 atgcatcttcttttcggtagccaattccataagaacttcagagttaagcgtgcttggcttagagcaattttgggatgggtgacctaccgaaaagttttcc 4127828  T
Q  116 aaaaagcgtgtgaatgataataaaacacgctgaaaagactcatgtt 161  Q
       |||||||||| |||  | |||||||||||||||||||| ||||    
T  4127827 ggtaagcgtgtgagtgaggacaaaacacgctgaaaagactcgtgtt 4127782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 161
Target Start/End: Original strand, 49998738 - 49998883
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctc 115  Q
    |||||||||||||| |||||| |||||||||| |||||||| || ||||||| ||||||| ||||||||||||||||| |||||  | | |||||||| |    
T  49998738 atgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgtttgacttggagcaattttgggatgggtgacctaccgggaagtttccc 49998837  T
Q  116 aaaaagcgtgtgaatgataataaaacacgctgaaaagactcatgtt 161  Q
       ||| ||| || |||  | |||||||||||||||||||| ||||    
T  49998838 ggtaagtgtgcgagtgaggacaaaacacgctgaaaagactcgtgtt 49998883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 61 - 161
Target Start/End: Complemental strand, 14572147 - 14572047
Alignment:
Q  61 aagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctcaaaaagcgtgtgaatgataataaaacacgctgaaaagactcatgt 160  Q
    ||||||||||||||||||||||||||| ||||| ||||| |||| ||||||||||  ||||||||||| |||  | |||||||| ||||||||||| |||    
T  14572147 aagcgtgcttgacttagagcaattttgagatgggtgaccttctgggaagtttctcggaaagcgtgtgagtgaggacaaaacacggtgaaaagactcgtgt 14572048  T
Q  161 t 161  Q
    |    
T  14572047 t 14572047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 16 - 99
Target Start/End: Complemental strand, 44471363 - 44471280
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgacc 99  Q
    |||||||||||||| |||||| |||||||||| |||||||| || |||||||||||| || ||||||||||||||||| |||||    
T  44471363 atgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgatttggagcaattttgggatgggtgacc 44471280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 93
Target Start/End: Complemental strand, 15306129 - 15306052
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatgg 93  Q
    |||||||||||||| |||||| |||||||||| |||||||| || ||||||||||||||| ||||||| |||||||||    
T  15306129 atgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgactttgagcaatcttgggatgg 15306052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 156
Target Start/End: Complemental strand, 7678660 - 7678520
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctc 115  Q
    |||||||||||||| ||||||  ||||||||| |||||||| || ||| ||||||||||| ||||||||||||||||| |||||  | | |||||||| |    
T  7678660 atgcatcttcttttcggtagcttattccataagaactccacagttaagtgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttccc 7678561  T
Q  116 aaaaagcgtgtgaatgataataaaacacgctgaaaagactc 156  Q
       ||| ||| || |||  | ||||||||||||||||||||    
T  7678560 ggtaagtgtgcgagtgaggacaaaacacgctgaaaagactc 7678520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 23 - 99
Target Start/End: Original strand, 35871736 - 35871812
Alignment:
Q  23 ttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgacc 99  Q
    ||||||| |||||| |||||||||| |||||||| || ||||||||||||||| ||||||||||||||||| |||||    
T  35871736 ttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacc 35871812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 38 - 194
Target Start/End: Complemental strand, 44470891 - 44470735
Alignment:
Q  38 cattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctcaaaaagcgtgtgaatgataata 137  Q
    |||||||||| |||||||| || ||||||||||||||| ||||||||||||||||| |||||  | | |||||||| |   ||||||| || |||  | |    
T  44470891 cattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatggttgacctaccgggaagtttcccggtaagcgtgcgagtgaggaca 44470792  T
Q  138 aaacacgctgaaaagactcatgtttatttgttgggtcattcagtaatacttaaagtc 194  Q
    |||||||||| |||||||| ||||  ||||| |||||| |||  ||| |||||||||    
T  44470791 aaacacgctggaaagactcgtgttggtttgtagggtcagtcaacaattcttaaagtc 44470735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 75
Target Start/End: Complemental strand, 1645787 - 1645728
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgactt 75  Q
    |||||||||||||||||||||||||||||||| |||||||| || |||||||||||||||    
T  1645787 atgcatcttctttttggtagcccattccataagaactccacagttaagcgtgcttgactt 1645728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 99
Target Start/End: Complemental strand, 24629015 - 24628932
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgacc 99  Q
    ||||||||||||||  ||||| | |||||||| |||||||| || ||||||||||||||| ||||||||||||||||| |||||    
T  24629015 atgcatcttcttttcagtagctcgttccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacc 24628932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 16 - 174
Target Start/End: Original strand, 1464249 - 1464406
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctc 115  Q
    |||||||||||||| |||||| |||| ||||| |||| |||  |  ||||||||| |||| ||||||||||||||||| ||||| ||||||||||||  |    
T  1464249 atgcatcttcttttcggtagctcatttcataagaacttcacaatttagcgtgcttaacttggagcaattttgggatgggtgaccttctgagaagttttcc 1464348  T
Q  116 aaaaagcgtgtgaatgataataaaacacgctgaaaagactcatgtttatttgttgggtc 174  Q
    ||||| |||| || | |  | | ||||||||||||| |||| |||| |||||| |||||    
T  1464349 aaaaaacgtgcgagttaggacacaacacgctgaaaa-actcgtgttgatttgtggggtc 1464406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 19 - 175
Target Start/End: Complemental strand, 27578944 - 27578788
Alignment:
Q  19 catcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctcaaa 118  Q
    |||||||||||  |||||||  ||||||| |||| ||| || |||||||||| |||| |||| |||||||||||  ||||| |||| |||||||| || |    
T  27578944 catcttcttttcagtagccctatccataagaactacacagttaagcgtgcttaacttggagcgattttgggatgcgtgaccttctgggaagtttcccaga 27578845  T
Q  119 aagcgtgtgaatgataataaaacacgctgaaaagactcatgtttatttgttgggtca 175  Q
    ||||||| || |||  | ||| || ||||||||||||  |||| |||||| ||||||    
T  27578844 aagcgtgcgagtgaggacaaatcatgctgaaaagacttgtgttgatttgtagggtca 27578788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 69 - 173
Target Start/End: Original strand, 41870073 - 41870177
Alignment:
Q  69 ttgacttagagcaattttgggatggctgaccatctgagaagtttctcaaaaagcgtgtgaatgataataaaacacgctgaaaagactcatgtttatttgt 168  Q
    ||||| |||||||||||||||||||  |||| ||||| |||||| || |||||||||| |  ||| | | |||||||||||||||||| |||||||||||    
T  41870073 ttgacatagagcaattttgggatggaagaccttctgaaaagtttttcgaaaagcgtgtaagggatgacagaacacgctgaaaagactcgtgtttatttgt 41870172  T
Q  169 tgggt 173  Q
     ||||    
T  41870173 ggggt 41870177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 99
Target Start/End: Complemental strand, 24629471 - 24629388
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgacc 99  Q
    |||||||||||||| |||| | | |||||||| || ||||| || ||||||||||||||| ||||||||||||||||| |||||    
T  24629471 atgcatcttcttttcggtacctcgttccataagaattccacagttaagcgtgcttgacttggagcaattttgggatgggtgacc 24629388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 42 - 175
Target Start/End: Complemental strand, 14571700 - 14571567
Alignment:
Q  42 ccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctcaaaaagcgtgtgaatgataataaaac 141  Q
    |||||| |||||||| || ||||||||||||||| ||||||||| | ||||| ||| | | || ||||||||||  |||| |||||| |||  | |||||    
T  14571700 ccataagaactccacagttaagcgtgcttgacttggagcaatttcgagatgggtgatcttttgggaagtttctcggaaagtgtgtgagtgaggacaaaac 14571601  T
Q  142 acgctgaaaagactcatgtttatttgttgggtca 175  Q
    ||| ||||||||||| ||||  ||||| ||||||    
T  14571600 acgttgaaaagactcgtgttggtttgtggggtca 14571567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 156
Target Start/End: Complemental strand, 27578495 - 27578355
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctc 115  Q
    |||||||||||||| |||| ||||  |||||| |||||||  || ||||||||||||||| || |||||||||||||   |||| |||| |||||||  |    
T  27578495 atgcatcttcttttcggtatcccaaaccataagaactccatagttaagcgtgcttgacttcgaacaattttgggatgagcgaccttctgggaagttttcc 27578396  T
Q  116 aaaaagcgtgtgaatgataataaaacacgctgaaaagactc 156  Q
     | ||||||| || |||  | ||||||||| ||||||||||    
T  27578395 gacaagcgtgcgagtgaggacaaaacacgcagaaaagactc 27578355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 199
Target Start/End: Original strand, 14351897 - 14352080
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctc 115  Q
    ||||||||||||||||||| || ||||||||| |||||||| || ||||||| ||||||| ||| | | || |||||| |||||  |||  ||||||  |    
T  14351897 atgcatcttctttttggtatcctattccataagaactccacagttaagcgtgtttgacttcgagtagtctttggatggatgacctactgcaaagttttcc 14351996  T
Q  116 aaaaagcgtgtgaatgataataaaacacgctgaaaagactcatgtttatttgttgggtcattcagtaatacttaaagtcatatg 199  Q
    |  |||||||  | |||  | |||| | ||||||||||||||||||  |||||  ||||| |||| ||| ||||||||| ||||    
T  14351997 agtaagcgtgcaagtgaagacaaaatatgctgaaaagactcatgttggtttgtatggtcagtcagcaatgcttaaagtcgtatg 14352080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 155
Target Start/End: Original strand, 17628613 - 17628752
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctc 115  Q
    |||||||||||||| | |||||||  |||||| || ||||| ||  ||||||| |||||| ||||||||||| ||||| ||||| |||  |||| ||| |    
T  17628613 atgcatcttcttttcgatagcccaacccataagaattccacagttgagcgtgcctgacttggagcaattttgagatgggtgaccttctaggaagattccc 17628712  T
Q  116 aaaaagcgtgtgaatgataataaaacacgctgaaaagact 155  Q
    | ||||||||||| |||  | ||||||| ||| |||||||    
T  17628713 ataaagcgtgtgagtgaggacaaaacacactggaaagact 17628752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 99
Target Start/End: Complemental strand, 21220369 - 21220286
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgacc 99  Q
    ||||||||||||||||||| | ||||| |||| |||| ||| || ||||||| ||||||| |||||||||||||| || |||||    
T  21220369 atgcatcttctttttggtaactcattctataagaactacacagttaagcgtgtttgacttggagcaattttgggacgggtgacc 21220286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 75
Target Start/End: Complemental strand, 23942827 - 23942768
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgactt 75  Q
    ||||||||||||||| ||||| |||||||||| |||||||| || |||||||||||||||    
T  23942827 atgcatcttcttttttgtagcacattccataagaactccacagttaagcgtgcttgactt 23942768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 24 - 86
Target Start/End: Complemental strand, 20306194 - 20306132
Alignment:
Q  24 tctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaatttt 86  Q
    ||||||||||| |||||| ||||| |||| |||||| ||||||||||||||| ||||||||||    
T  20306194 tctttttggtatcccatttcataagaactacacggttaagcgtgcttgacttggagcaatttt 20306132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 93
Target Start/End: Complemental strand, 23091549 - 23091472
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatgg 93  Q
    ||||||||||||| |||||||  |||| |||| |||||||| || |||| ||||||||||  ||||||||||||||||    
T  23091549 atgcatcttctttctggtagcttattctataaaaactccacagttaagcatgcttgacttgtagcaattttgggatgg 23091472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 75
Target Start/End: Original strand, 3169308 - 3169367
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgactt 75  Q
    ||||||||||||||||||| |||| ||||||| ||||||||  | |||||||||||||||    
T  3169308 atgcatcttctttttggtaacccaatccataagaactccacacttaagcgtgcttgactt 3169367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 118 - 173
Target Start/End: Original strand, 5810038 - 5810093
Alignment:
Q  118 aaagcgtgtgaatgataataaaacacgctgaaaagactcatgtttatttgttgggt 173  Q
    ||||||||||| |||  ||||||||||||||||||||||||||| |||||| ||||    
T  5810038 aaagcgtgtgagtgaggataaaacacgctgaaaagactcatgttgatttgtggggt 5810093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 71
Target Start/End: Original strand, 27029379 - 27029434
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttg 71  Q
    |||||||||||||| ||||||||||||||||| |||||||| || ||| |||||||    
T  27029379 atgcatcttcttttcggtagcccattccataagaactccacagttaagtgtgcttg 27029434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 161
Target Start/End: Complemental strand, 27578314 - 27578179
Alignment:
Q  26 tttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctcaaaaagcgtg 125  Q
    |||| |||||||||  | |||| |||| ||| || ||||||||||||||| ||||| ||||||||||  ||||| | || |||||||| |  ||| ||||    
T  27578314 ttttcggtagcccaaactataagaacttcacagttaagcgtgcttgacttggagcagttttgggatgagtgaccttatgggaagtttccctgaaaacgtg 27578215  T
Q  126 tgaatgataataaaacacgctgaaaagactcatgtt 161  Q
     || |||  | |||||||||||||||||||| ||||    
T  27578214 cgagtgaggacaaaacacgctgaaaagactcgtgtt 27578179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 75
Target Start/End: Complemental strand, 50398576 - 50398517
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgactt 75  Q
    |||||||||||||| |||||| |||||||||| |||||||  || |||||||||||||||    
T  50398576 atgcatcttcttttcggtagctcattccataagaactccatagttaagcgtgcttgactt 50398517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 75
Target Start/End: Complemental strand, 50399031 - 50398972
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgactt 75  Q
    |||||||||||||| |||||| |||||||||| |||||||| || ||||||| |||||||    
T  50399031 atgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgtttgactt 50398972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 66 - 128
Target Start/End: Complemental strand, 26200281 - 26200219
Alignment:
Q  66 tgcttgacttagagcaattttgggatggctgaccatctgagaagtttctcaaaaagcgtgtga 128  Q
    |||||||||| ||||||||||||||||| ||||| || | |||||||| | ||||||||||||    
T  26200281 tgcttgacttggagcaattttgggatgggtgaccttcagcgaagtttcacgaaaagcgtgtga 26200219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 31 - 104
Target Start/End: Complemental strand, 11828508 - 11828435
Alignment:
Q  31 ggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctg 104  Q
    |||||| | |||||||| |||||||| || |||||||||| |||| ||||| ||||||||||| ||||| ||||    
T  11828508 ggtagctccttccataagaactccacagttaagcgtgctttacttggagcatttttgggatgggtgaccttctg 11828435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 75
Target Start/End: Complemental strand, 51331316 - 51331260
Alignment:
Q  19 catcttctttttggtagcccattccataataactccacggtcaagcgtgcttgactt 75  Q
    ||||||||||| |||||| |||| ||||| |||||||| || |||||||||||||||    
T  51331316 catcttcttttcggtagctcatttcataagaactccacagttaagcgtgcttgactt 51331260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 75
Target Start/End: Complemental strand, 53996150 - 53996094
Alignment:
Q  19 catcttctttttggtagcccattccataataactccacggtcaagcgtgcttgactt 75  Q
    |||||||||||||||| | |||||||||| |||||||| || ||| |||||||||||    
T  53996150 catcttctttttggtatctcattccataagaactccacagttaagtgtgcttgactt 53996094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 75
Target Start/End: Complemental strand, 29628694 - 29628647
Alignment:
Q  28 tttggtagcccattccataataactccacggtcaagcgtgcttgactt 75  Q
    |||||||||||||||||||| |||||||| || ||||||| |||||||    
T  29628694 tttggtagcccattccataagaactccacagttaagcgtgtttgactt 29628647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 175
Target Start/End: Complemental strand, 8467813 - 8467692
Alignment:
Q  49 aactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctcaaaaagcgtgtgaatgataataaaacacgctga 148  Q
    |||||||| || ||||||||||||||| |||||||||||||     ||||| | || ||||||||||  ||||| || || |||  | |||||||| |||    
T  8467813 aactccacagttaagcgtgcttgacttggagcaattttggg-----tgaccttatgggaagtttctcggaaagcatgcgagtgaggacaaaacacgttga 8467719  T
Q  149 aaagactcatgtttatttgttgggtca 175  Q
    |||||||| ||||  ||||| ||||||    
T  8467718 aaagactcgtgttggtttgtggggtca 8467692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 98
Target Start/End: Original strand, 33764962 - 33765044
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgac 98  Q
    ||||||||||||||| ||||| ||||  |||| |||| |||  | |||||||||||| || || |||||||||||||| ||||    
T  33764962 atgcatcttcttttttgtagctcattttataagaacttcacacttaagcgtgcttgatttggatcaattttgggatgggtgac 33765044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 75
Target Start/End: Original strand, 21067843 - 21067892
Alignment:
Q  26 tttttggtagcccattccataataactccacggtcaagcgtgcttgactt 75  Q
    |||||||||| ||||||||||| |||| ||| || |||||||||||||||    
T  21067843 tttttggtagtccattccataagaacttcacagttaagcgtgcttgactt 21067892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 56
Target Start/End: Complemental strand, 4127475 - 4127435
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccac 56  Q
    |||||||||||||| |||||| |||||||||| ||||||||    
T  4127475 atgcatcttcttttcggtagctcattccataagaactccac 4127435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 112
Target Start/End: Original strand, 13266188 - 13266284
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagttt 112  Q
    ||||||||| |||| |||||||||   || || ||| |||| || ||||||||||||||| ||| |||||| |||||| ||||| | || |||||||    
T  13266188 atgcatcttattttcggtagcccaaatcacaagaaccccacagttaagcgtgcttgactttgagaaattttaggatgggtgaccttttgggaagttt 13266284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0499 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0499
Description:

Target: scaffold0499; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 16 - 175
Target Start/End: Complemental strand, 2095 - 1936
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctc 115  Q
    |||||||||||||| |||||| |||||||||| |||||||| || ||||||||||||||| ||||||||||||||||| |||||  | | |||||||| |    
T  2095 atgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttccc 1996  T
Q  116 aaaaagcgtgtgaatgataataaaacacgctgaaaagactcatgtttatttgttgggtca 175  Q
       ||||||| || |||  | |||| ||||||||||||||| ||||  ||||| ||||||    
T  1995 ggtaagcgtgcgagtgaggacaaaatacgctgaaaagactcgtgttggtttgtggggtca 1936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 59; Significance: 4e-25; HSPs: 3)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 16 - 174
Target Start/End: Original strand, 163173 - 163331
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctc 115  Q
    |||||||||||||| |||||| |||||  ||| || ||||| || ||||||||||||||| ||||||||||||||||| |||||  | |||||||||| |    
T  163173 atgcatcttcttttcggtagctcattctttaagaattccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgagaagtttccc 163272  T
Q  116 aaaaagcgtgtgaatgataataaaacacgctgaaaagactcatgtttatttgttgggtc 174  Q
    |  ||||||| || |||  | |||||||||||||||||||| ||||  ||||| |||||    
T  163273 agtaagcgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtagggtc 163331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 10 - 161
Target Start/End: Complemental strand, 163184 - 163033
Alignment:
Q  10 aagaatatgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgacc-atctgagaa 108  Q
    ||||| ||||||||| |||| |||||| |||||||||| |||||||| || ||||||||||||||| ||||||||||||||||| ||||| ||| | |||    
T  163184 aagaagatgcatcttgttttcggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctatc-gggaa 163086  T
Q  109 gtttctcaaaaagcgtgtgaatgataataaaacacgctgaaaagactcatgtt 161  Q
    |||||||   ||||||  || |||  | |||||||||||||||||||| ||||    
T  163085 gtttctcggtaagcgttcgagtgaggacaaaacacgctgaaaagactcgtgtt 163033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 16 - 175
Target Start/End: Complemental strand, 162722 - 162562
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgacc-atctgagaagtttct 114  Q
    |||||||||||||| |||||| |||||||||| |||||| | || ||||||||||||||| |||||| |||||||||  ||||| | ||| ||||||||     
T  162722 atgcatcttcttttcggtagctcattccataagaactccgcagttaagcgtgcttgacttggagcaactttgggatgagtgacctacctg-gaagtttcg 162624  T
Q  115 caaaaagcgtgtgaatgataataaaacacgctg-aaaagactcatgtttatttgttgggtca 175  Q
    | | ||||||| || |||  | ||||||||||| ||||||||| ||||  ||||| ||||||    
T  162623 cgataagcgtgcgagtgaggacaaaacacgctgaaaaagactcgtgttggtttgtggggtca 162562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 161
Target Start/End: Original strand, 105822 - 105967
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctc 115  Q
    |||||||||||||| |||||| |||||||||| |||||||| || ||||||||||||||| ||||||||||||||||  |||||  | ||||||||||      
T  105822 atgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgtgtgacctaccgagaagtttcct 105921  T
Q  116 aaaaagcgtgtgaatgataataaaacacgctgaaaagactcatgtt 161  Q
       ||||||| || |||  | |||||||||||||||||||| ||||    
T  105922 ggtaagcgtgcgagtgaggacaaaacacgctgaaaagactcgtgtt 105967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 175
Target Start/End: Original strand, 2844 - 3003
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctc 115  Q
    |||||| ||||||| |||||| |||||||||| |||||||| || ||||||||||||||| |||||||||||||||||  ||||  | | |||||||| |    
T  2844 atgcatattcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggagacctaccgggaagtttccc 2943  T
Q  116 aaaaagcgtgtgaatgataataaaacacgctgaaaagactcatgtttatttgttgggtca 175  Q
       ||| ||| || |||  | |||||||||||||||||||| |||| |||||| ||||||    
T  2944 ggtaagtgtgcgagtgaggacaaaacacgctgaaaagactcgtgttgatttgtggggtca 3003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 175
Target Start/End: Complemental strand, 107507 - 107348
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctc 115  Q
    |||||||||||||| |||||| |||||||||| |||||||| || ||||||||||||||| ||||||||||||||||| ||||   | | |||||||| |    
T  107507 atgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacgtaccgggaagtttccc 107408  T
Q  116 aaaaagcgtgtgaatgataataaaacacgctgaaaagactcatgtttatttgttgggtca 175  Q
       ||||||| || |||  | |||||| ||||||||||||| ||||  ||||| ||||||    
T  107407 ggtaagcgtgcgagtgaggacaaaacatgctgaaaagactcgtgttggtttgtggggtca 107348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 61 - 161
Target Start/End: Original strand, 245229 - 245329
Alignment:
Q  61 aagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctcaaaaagcgtgtgaatgataataaaacacgctgaaaagactcatgt 160  Q
    ||||||||||||||||||||||||||| ||||| ||||| |||| ||||||||||  ||||||||||| |||  | |||||||| ||||||||||| |||    
T  245229 aagcgtgcttgacttagagcaattttgagatgggtgaccttctgggaagtttctcggaaagcgtgtgagtgaggacaaaacacggtgaaaagactcgtgt 245328  T
Q  161 t 161  Q
    |    
T  245329 t 245329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 42 - 175
Target Start/End: Original strand, 245676 - 245809
Alignment:
Q  42 ccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctcaaaaagcgtgtgaatgataataaaac 141  Q
    |||||| |||||||| || ||||||||||||||| ||||||||| | ||||| ||| | | || ||||||||||  |||| |||||| |||  | |||||    
T  245676 ccataagaactccacagttaagcgtgcttgacttggagcaatttcgagatgggtgatcttttgggaagtttctcggaaagtgtgtgagtgaggacaaaac 245775  T
Q  142 acgctgaaaagactcatgtttatttgttgggtca 175  Q
    ||| ||||||||||| ||||  ||||| ||||||    
T  245776 acgttgaaaagactcgtgttggtttgtggggtca 245809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0277
Description:

Target: scaffold0277; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 16 - 99
Target Start/End: Complemental strand, 14746 - 14663
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgacc 99  Q
    ||||||||| |||| |||||| |||||||||| |||||||| || ||||||||||||||| ||||||||||||||||| |||||    
T  14746 atgcatcttgttttcggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacc 14663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 16 - 175
Target Start/End: Original strand, 154859 - 155018
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctc 115  Q
    ||||||||||||||  ||||| |||||||||| |||||||| || ||||||||||||||| |||||||||||| |||| |||||  | | ||||||||||    
T  154859 atgcatcttcttttcagtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttggaatgggtgacctaccgggaagtttctc 154958  T
Q  116 aaaaagcgtgtgaatgataataaaacacgctgaaaagactcatgtttatttgttgggtca 175  Q
       ||| |||  | |||  | |||||||||||||||||||| ||||  ||||| ||||||    
T  154959 ggtaagtgtgctagtgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtca 155018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 175
Target Start/End: Original strand, 10402 - 10560
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctc 115  Q
    ||||||||| |||| |||||| |||||||||| |||||||| || ||||||||||||||| |||||||||| |||||| |||||  | | ||||||||      
T  10402 atgcatctttttttcggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaatttt-ggatgggtgacctaccgggaagtttcct 10500  T
Q  116 aaaaagcgtgtgaatgataataaaacacgctgaaaagactcatgtttatttgttgggtca 175  Q
       ||||||| || |||  | |||||||||||||||||||| ||||  ||||| ||||||    
T  10501 ggtaagcgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtca 10560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 25 - 175
Target Start/End: Original strand, 421 - 571
Alignment:
Q  25 ctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctcaaaaagcgt 124  Q
    ||||| |||||| |||||||||| | |||||  || ||||||||||||| | ||||||||||||||||| |||||  | | |||||||| | | |||| |    
T  421 cttttcggtagctcattccataaaatctccatagttaagcgtgcttgacatggagcaattttgggatgggtgacctaccgggaagtttcccgataagcat 520  T
Q  125 gtgaatgataataaaacacgctgaaaagactcatgtttatttgttgggtca 175  Q
    |||| |||  | |||||||||||||||||||| ||||  ||||| ||||||    
T  521 gtgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtca 571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 99
Target Start/End: Complemental strand, 2254 - 2171
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgacc 99  Q
    |||||||||||||| ||||||  ||||||||| ||||| |  || ||||||||||||||| ||||||||||||||||| |||||    
T  2254 atgcatcttcttttcggtagcttattccataagaactcaatagttaagcgtgcttgacttggagcaattttgggatgggtgacc 2171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 2)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 99
Target Start/End: Original strand, 5123 - 5205
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgacc 99  Q
    |||||||||||||| |||||| |||| ||||| |||||||| || |||||||||| |||| |||||| |||||||||| |||||    
T  5123 atgcatcttcttttcggtagctcatttcataagaactccacagttaagcgtgcttaacttggagcaa-tttgggatgggtgacc 5205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 175
Target Start/End: Original strand, 4663 - 4821
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctc 115  Q
    |||||||||||||| |||||| ||||  |||| |||||||| || ||| |||||| |||| |||||| |||||||||| |||||  | | |||||||| |    
T  4663 atgcatcttcttttcggtagctcattttataagaactccacagttaagtgtgcttaacttggagcaa-tttgggatgggtgacctaccgggaagtttccc 4761  T
Q  116 aaaaagcgtgtgaatgataataaaacacgctgaaaagactcatgtttatttgttgggtca 175  Q
       ||| ||| || |||  | |||||||||||||||||||| ||||  ||||| ||||||    
T  4762 ggtaagtgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtagggtca 4821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0557 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0557
Description:

Target: scaffold0557; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 2207 - 2264
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgac 73  Q
    |||||||||||||||||||||||||||| ||| |||||||| || |||| ||||||||    
T  2207 atgcatcttctttttggtagcccattccttaagaactccacagttaagcatgcttgac 2264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1519 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 61 - 175
Target Start/End: Complemental strand, 1700 - 1586
Alignment:
Q  61 aagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctcaaaaagcgtgtgaatgataataaaacacgctgaaaagactcatgt 160  Q
    ||||||||||||||| ||||||||||||||||| |||||  | | |||||||| |   |||| ||||| |||  | |||||||||| ||||||||| |||    
T  1700 aagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcccggtaagcatgtgagtgaggacaaaacacgctaaaaagactcgtgt 1601  T
Q  161 ttatttgttgggtca 175  Q
    |  ||||| ||||||    
T  1600 tggtttgtggggtca 1586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 161
Target Start/End: Complemental strand, 17638 - 17497
Alignment:
Q  20 atcttctttttggtagcccattccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctcaaaa 119  Q
    ||||||||||||||||| || | ||||| |||||||| || ||||||||||||||| ||| | | || |||||| |||||  ||   |||||| ||   |    
T  17638 atcttctttttggtagctcaattcataagaactccacagttaagcgtgcttgacttggagtactctttggatgggtgacctactcgaaagtttttcggta 17539  T
Q  120 agcgtgtgaatgataataaaacacgctgaaaagactcatgtt 161  Q
    |||||| || |||  | |||||||||||||||||||| ||||    
T  17538 agcgtgcgagtgaggacaaaacacgctgaaaagactcgtgtt 17497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 75
Target Start/End: Complemental strand, 18178 - 18120
Alignment:
Q  16 atgcatcttctttttggtagcccattccataataactccacggtcaagcgtgcttgactt 75  Q
    ||||||||| |||||||||||  ||||||||| |||||||| || |||||||||||||||    
T  18178 atgcatctt-tttttggtagctaattccataagaactccacagttaagcgtgcttgactt 18120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 128
Target Start/End: Original strand, 7070 - 7156
Alignment:
Q  42 ccataataactccacggtcaagcgtgcttgacttagagcaattttgggatggctgaccatctgagaagtttctcaaaaagcgtgtga 128  Q
    |||||| |||||||| || |||| |||||||||| |||||||||||| |||| ||||| | ||  ||||||| | |||||| |||||    
T  7070 ccataagaactccacagttaagcatgcttgacttggagcaattttggtatgggtgaccttttggaaagtttcccgaaaagcatgtga 7156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University