View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1914_low_10 (Length: 423)
Name: NF1914_low_10
Description: NF1914
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1914_low_10 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 386; Significance: 0; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 386; E-Value: 0
Query Start/End: Original strand, 22 - 423
Target Start/End: Complemental strand, 32096904 - 32096503
Alignment:
| Q |
22 |
tcccaatgcctcctcaaatacatcctcttcacagtcccatacctccacaccaaaaaccatgacgaaacctcccctcaaactcatgatgcaggcgttgacc |
121 |
Q |
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| T |
32096904 |
tcccaatgcctcctcaaatacatcctcttcacagtcccatacctccacaccaaaaaccatgacgaaacctcccctcaaactcatgatgcaggcgttgacc |
32096805 |
T |
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| Q |
122 |
cctcctccaagttacgcggcaagggaacaccgcaagacgagctgagcgccaaccatgtcctcgcggagcgacgaagaagagagaaactcaatgagaggtt |
221 |
Q |
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|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
32096804 |
cctcctccaagttacgtggcaagggaacaccgcaagacgagctgagcgccaaccatgtcctcgcggagcgacgaagaagagagaaactcaatgaaaggtt |
32096705 |
T |
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| Q |
222 |
cattattttaagatcattggttccattcgtgacaaaaatggacaaggcttctctattaggtgacactattgagtacttgaaacagctaagaagaaagata |
321 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32096704 |
cattattttaagatcattggttccattcgtgacaaaaatggacaaggcttctatattaggtgacactattgagtacttgaaacagctaagaagaaagata |
32096605 |
T |
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| Q |
322 |
caagatcttgaaacacgtaaccgtcagatagagattgaacaacaaagtaggagtggtgtaacggttttggtgggtccaacagataagaaaaaggtgagga |
421 |
Q |
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|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32096604 |
caagatcttgaaacacgtaaccgtcagatagagactgaacaacaaagtaggagtggtgtaacggttttggtgggtccaacagataagaaaaaggtgagga |
32096505 |
T |
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| Q |
422 |
tt |
423 |
Q |
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| T |
32096504 |
tt |
32096503 |
T |
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