View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1914_low_21 (Length: 250)
Name: NF1914_low_21
Description: NF1914
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1914_low_21 |
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Alignment Details
Target: chr1 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 32667874 - 32668108
Alignment:
| Q |
1 |
tataagagcatttaaacttccaaatccaatgtactatgttgcctagtttatcagctattgtaacagcattgtttctttcccattttaaatttctaatagc |
100 |
Q |
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|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
32667874 |
tataagagcattcaaacttccaaatccaatgtactatgttgcctagtttatcagctattgtaacagcattgtttctttcccattttaaatttcttatagc |
32667973 |
T |
|
| Q |
101 |
tgcactggtgtttaaggaatatccatttggtagaaggcagacagccatatccatgaccatgcggatattgtatgtcttaccagaatcacatgcaggctta |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
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| T |
32667974 |
tgcactggtgtttaaggaatatccatttggtagaaggcagacagccatatccatgaccatgtggatattgtatgtcttaccagaatcacatgcaggctta |
32668073 |
T |
|
| Q |
201 |
taattattctaaaaatgcccaaaagttatatggag |
235 |
Q |
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||||||||||||||||||||||||||||||||||| |
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| T |
32668074 |
taattattctaaaaatgcccaaaagttatatggag |
32668108 |
T |
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