View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19150_low_6 (Length: 381)
Name: NF19150_low_6
Description: NF19150
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19150_low_6 |
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Alignment Details
Target: chr5 (Bit Score: 350; Significance: 0; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 350; E-Value: 0
Query Start/End: Original strand, 10 - 363
Target Start/End: Complemental strand, 36157224 - 36156871
Alignment:
| Q |
10 |
attattctctctatctgtttccttcacttgtcaatatttttgtgtcacatgttttgtccctttatataaaaacgttcctcattggggttctcgagaaaag |
109 |
Q |
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| T |
36157224 |
attattctctctatctgtttccttcacttgtcaatatttttgtgtcacatgttttgtccctttatataaaaacgttcctcattggggttctcgagaaaag |
36157125 |
T |
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| Q |
110 |
ggacagagttgctgtacattgaatcattgatattggtcatgcaattcatatatgatgcctaatcttaaccctaataataatatatatagtcttcatttaa |
209 |
Q |
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| T |
36157124 |
ggaccgagttgctgtacattgaatcattgatattggtcatgcaattcatatatgatgcctaatcttaaccctaataataatatatatagtcttcatttaa |
36157025 |
T |
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| Q |
210 |
ttgtctactacgtatagaagccagctaagttcatcaataaggaatatatcttgcattttatttcccatcatgcatgagaatgacggaaattttttgtgac |
309 |
Q |
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| T |
36157024 |
ttgtctactacgtatagaagccagctaagttcatcaataaggaatatatcttgcattttatttcccatcatgcatgagaatgacggaaattttttgtgac |
36156925 |
T |
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| Q |
310 |
atatgtagaatgaagaacaaggtgatactattgatgcacaagctgtgaaacaag |
363 |
Q |
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| T |
36156924 |
atatgtagaatgaagaacaaggtgatactattgatgcacaagctgtgaaacaag |
36156871 |
T |
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