View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19152_low_13 (Length: 316)
Name: NF19152_low_13
Description: NF19152
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19152_low_13 |
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Alignment Details
Target: chr6 (Bit Score: 257; Significance: 1e-143; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 3 - 298
Target Start/End: Original strand, 1216410 - 1216722
Alignment:
| Q |
3 |
gtacgtatgcattcatttcagtactcttcatgaccaatggcttgcgttccaagtctacgaggcttgtatgcgtcttggctctgctcctgaaatgtctgac |
102 |
Q |
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| T |
1216410 |
gtacgtatgcattcatttcagtactcttcatgaccaatggcttgcgttccaagtctacgaggcttgtatgcgtcttggctctgctcctgaaatgtctgac |
1216509 |
T |
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| Q |
103 |
tgcaaggaagctaaaacttttgtgaaaaatgattattatttactcagggactcatttgggtgagtgagttcaccttt-----------------taactg |
185 |
Q |
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| T |
1216510 |
tgcaaggaagctaaaacttttgtgaaaaatgattattatttactcagggactcatttgggtgagtgagttcaccttttaagattcttccgccaataactg |
1216609 |
T |
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| Q |
186 |
catgttcttctagtttcattttcctgaattattctatgtgtagattgcgacaaattctactgaagtcagaaaaggtacaaatgcaattggaaacagagat |
285 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1216610 |
catgttcttctagtttcattttcctgaattattctatgtgtagattgcgacaaattctactgaagtcagaaaaggtacaaatgcaattggaaacagagat |
1216709 |
T |
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| Q |
286 |
tcaaagtgggggt |
298 |
Q |
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||||||||||||| |
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| T |
1216710 |
tcaaagtgggggt |
1216722 |
T |
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