View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19153_low_4 (Length: 265)

Name: NF19153_low_4
Description: NF19153
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19153_low_4
NF19153_low_4
[»] chr4 (69 HSPs)
chr4 (4-114)||(20688455-20688566)
chr4 (1-114)||(36099523-36099637)
chr4 (1-114)||(53621326-53621440)
chr4 (1-114)||(4758775-4758889)
chr4 (1-117)||(2385190-2385307)
chr4 (1-103)||(31227307-31227410)
chr4 (1-113)||(38687910-38688023)
chr4 (1-113)||(49122520-49122632)
chr4 (1-113)||(18135310-18135425)
chr4 (1-103)||(31854388-31854491)
chr4 (1-102)||(39877439-39877541)
chr4 (1-114)||(18430251-18430367)
chr4 (1-113)||(35328975-35329088)
chr4 (1-100)||(2279560-2279660)
chr4 (1-116)||(6246644-6246760)
chr4 (1-103)||(5970288-5970391)
chr4 (1-114)||(19485608-19485722)
chr4 (1-114)||(55292110-55292224)
chr4 (1-114)||(580409-580523)
chr4 (1-98)||(23125682-23125780)
chr4 (1-101)||(47948975-47949076)
chr4 (1-108)||(21221153-21221261)
chr4 (1-108)||(3085877-3085984)
chr4 (1-114)||(2411838-2411952)
chr4 (1-114)||(15170881-15170995)
chr4 (1-98)||(52535965-52536063)
chr4 (1-98)||(56216270-56216368)
chr4 (2-77)||(21229262-21229338)
chr4 (1-66)||(7350252-7350318)
chr4 (25-103)||(32517779-32517857)
chr4 (1-70)||(39834310-39834380)
chr4 (1-114)||(44199970-44200084)
chr4 (1-77)||(53303772-53303849)
chr4 (1-101)||(4698659-4698760)
chr4 (15-103)||(29833274-29833363)
chr4 (49-114)||(53621413-53621478)
chr4 (49-113)||(18135398-18135462)
chr4 (1-72)||(51833048-51833120)
chr4 (1-114)||(4698621-4698735)
chr4 (49-114)||(4758862-4758927)
chr4 (49-114)||(36099485-36099550)
chr4 (49-117)||(23125641-23125709)
chr4 (15-98)||(38046660-38046744)
chr4 (57-113)||(49122613-49122669)
chr4 (49-114)||(580496-580561)
chr4 (49-106)||(2279530-2279587)
chr4 (49-114)||(2385280-2385345)
chr4 (49-103)||(18430340-18430394)
chr4 (1-114)||(56216232-56216346)
chr4 (57-114)||(7350185-7350242)
chr4 (49-106)||(7350291-7350348)
chr4 (49-102)||(27006515-27006568)
chr4 (49-114)||(38687996-38688061)
chr4 (49-114)||(47948937-47949002)
chr4 (49-113)||(3085957-3086021)
chr4 (44-102)||(2411920-2411978)
chr4 (49-103)||(5970364-5970418)
chr4 (49-99)||(6246621-6246671)
chr4 (49-103)||(31227280-31227334)
chr4 (49-103)||(31854464-31854518)
chr4 (1-70)||(43413584-43413653)
chr4 (49-103)||(51833021-51833075)
chr4 (49-103)||(52536036-52536090)
chr4 (57-114)||(20459333-20459390)
chr4 (57-114)||(42804254-42804311)
chr4 (57-114)||(47866034-47866091)
chr4 (1-96)||(31240878-31240974)
chr4 (49-113)||(39877402-39877466)
chr4 (49-113)||(44200057-44200121)
[»] chr8 (47 HSPs)
chr8 (1-114)||(43135080-43135194)
chr8 (1-114)||(2229068-2229182)
chr8 (1-117)||(2339326-2339443)
chr8 (1-113)||(25848003-25848116)
chr8 (1-113)||(30923920-30924033)
chr8 (1-114)||(34028419-34028533)
chr8 (1-114)||(29563694-29563808)
chr8 (1-114)||(40465236-40465350)
chr8 (1-101)||(43295074-43295175)
chr8 (1-114)||(22781918-22782032)
chr8 (1-114)||(41915630-41915744)
chr8 (1-103)||(33642494-33642597)
chr8 (1-108)||(41569100-41569208)
chr8 (1-103)||(7668227-7668330)
chr8 (1-103)||(11293196-11293299)
chr8 (1-103)||(32159043-32159146)
chr8 (1-114)||(42351196-42351310)
chr8 (1-113)||(27793233-27793346)
chr8 (1-113)||(34157697-34157810)
chr8 (1-101)||(40834172-40834273)
chr8 (1-103)||(37564640-37564743)
chr8 (1-114)||(3799714-3799828)
chr8 (1-113)||(45145905-45146014)
chr8 (1-103)||(42189839-42189942)
chr8 (1-114)||(8242259-8242373)
chr8 (1-98)||(12270070-12270168)
chr8 (1-102)||(25878182-25878284)
chr8 (1-103)||(33837616-33837720)
chr8 (49-113)||(2229155-2229219)
chr8 (15-102)||(16928851-16928939)
chr8 (1-113)||(29916564-29916676)
chr8 (49-114)||(2339288-2339353)
chr8 (49-113)||(29563657-29563721)
chr8 (49-108)||(12270141-12270200)
chr8 (51-113)||(45145868-45145930)
chr8 (49-114)||(25847965-25848030)
chr8 (49-114)||(30924006-30924071)
chr8 (49-101)||(32159119-32159171)
chr8 (49-113)||(33642457-33642521)
chr8 (49-108)||(22781886-22781945)
chr8 (49-103)||(37564716-37564770)
chr8 (57-110)||(32575173-32575226)
chr8 (52-113)||(33837579-33837640)
chr8 (49-114)||(41915592-41915657)
chr8 (49-101)||(7668202-7668254)
chr8 (49-113)||(34028382-34028446)
chr8 (49-108)||(40834139-40834199)
[»] chr3 (67 HSPs)
chr3 (1-114)||(6086899-6087013)
chr3 (1-114)||(10049704-10049818)
chr3 (1-108)||(9440132-9440240)
chr3 (1-114)||(26999057-26999171)
chr3 (1-101)||(335386-335487)
chr3 (1-108)||(19202254-19202362)
chr3 (1-103)||(8243691-8243794)
chr3 (1-108)||(14768134-14768242)
chr3 (1-102)||(29019771-29019873)
chr3 (1-113)||(40214899-40215012)
chr3 (1-108)||(25846515-25846623)
chr3 (1-103)||(9465080-9465183)
chr3 (1-103)||(47449952-47450055)
chr3 (1-114)||(18765256-18765370)
chr3 (1-98)||(23825185-23825283)
chr3 (1-114)||(51698112-51698226)
chr3 (1-113)||(21653343-21653456)
chr3 (1-113)||(25113348-25113461)
chr3 (1-117)||(28564930-28565047)
chr3 (1-103)||(1122311-1122414)
chr3 (1-114)||(28945692-28945806)
chr3 (1-114)||(40464558-40464672)
chr3 (1-114)||(52114022-52114136)
chr3 (5-101)||(9190068-9190165)
chr3 (26-113)||(26123052-26123139)
chr3 (1-103)||(49122980-49123083)
chr3 (1-102)||(42605837-42605939)
chr3 (1-113)||(22003832-22003945)
chr3 (1-113)||(22011349-22011462)
chr3 (1-113)||(42225561-42225674)
chr3 (1-103)||(379106-379212)
chr3 (8-113)||(13826155-13826261)
chr3 (1-115)||(39341369-39341487)
chr3 (1-103)||(44593210-44593313)
chr3 (1-79)||(8825767-8825846)
chr3 (49-114)||(8243767-8243832)
chr3 (49-114)||(10049666-10049731)
chr3 (49-113)||(9440213-9440277)
chr3 (49-112)||(6086986-6087049)
chr3 (1-98)||(55139209-55139307)
chr3 (49-113)||(26999020-26999084)
chr3 (49-116)||(28945652-28945719)
chr3 (49-114)||(14768096-14768161)
chr3 (49-114)||(51698199-51698264)
chr3 (49-110)||(52114109-52114170)
chr3 (49-113)||(379069-379133)
chr3 (49-108)||(49122948-49123007)
chr3 (15-72)||(42841639-42841697)
chr3 (1-97)||(22003811-22003908)
chr3 (1-97)||(22011328-22011425)
chr3 (49-114)||(25846596-25846661)
chr3 (1-113)||(40141879-40141986)
chr3 (1-113)||(48593141-48593254)
chr3 (49-113)||(9465156-9465220)
chr3 (49-113)||(29019734-29019798)
chr3 (49-101)||(47449927-47449979)
chr3 (49-108)||(25113434-25113493)
chr3 (1-82)||(8987759-8987841)
chr3 (52-102)||(21653432-21653482)
chr3 (1-114)||(28406503-28406617)
chr3 (44-114)||(42605907-42605977)
chr3 (49-102)||(3484342-3484395)
chr3 (49-98)||(9190042-9190091)
chr3 (1-58)||(16660334-16660394)
chr3 (49-102)||(40141959-40142012)
chr3 (49-114)||(40214985-40215050)
chr3 (49-113)||(19202335-19202399)
[»] chr5 (57 HSPs)
chr5 (1-113)||(37699779-37699892)
chr5 (1-114)||(25027730-25027844)
chr5 (1-114)||(29374206-29374320)
chr5 (1-114)||(13144916-13145030)
chr5 (1-103)||(7749954-7750057)
chr5 (1-114)||(903964-904078)
chr5 (1-102)||(41989600-41989702)
chr5 (1-113)||(31802957-31803070)
chr5 (1-114)||(1643380-1643494)
chr5 (1-114)||(26898227-26898341)
chr5 (1-114)||(36417045-36417159)
chr5 (1-101)||(2825896-2825997)
chr5 (1-108)||(21090380-21090488)
chr5 (1-103)||(9601602-9601705)
chr5 (1-114)||(7053684-7053797)
chr5 (1-102)||(18353218-18353320)
chr5 (1-114)||(23411201-23411315)
chr5 (1-101)||(6338326-6338427)
chr5 (1-101)||(7945873-7945974)
chr5 (1-101)||(21610312-21610413)
chr5 (1-99)||(15569344-15569443)
chr5 (1-103)||(41815221-41815324)
chr5 (1-114)||(20578653-20578767)
chr5 (1-114)||(36418983-36419097)
chr5 (1-98)||(41046864-41046962)
chr5 (1-103)||(42311819-42311922)
chr5 (1-114)||(1108319-1108433)
chr5 (1-108)||(2959243-2959351)
chr5 (1-108)||(2967712-2967820)
chr5 (1-96)||(14338851-14338947)
chr5 (1-103)||(6910748-6910851)
chr5 (1-69)||(16089130-16089199)
chr5 (49-114)||(25027692-25027757)
chr5 (49-115)||(37699865-37699931)
chr5 (49-113)||(13144879-13144943)
chr5 (49-113)||(29374169-29374233)
chr5 (1-82)||(38393785-38393867)
chr5 (49-114)||(1643342-1643407)
chr5 (49-114)||(15569416-15569481)
chr5 (49-114)||(41989562-41989627)
chr5 (49-113)||(7053647-7053711)
chr5 (49-114)||(21610386-21610451)
chr5 (49-113)||(7749917-7749981)
chr5 (49-113)||(9601678-9601742)
chr5 (49-113)||(31803043-31803107)
chr5 (49-113)||(36417132-36417196)
chr5 (44-103)||(1108292-1108351)
chr5 (49-116)||(6338400-6338467)
chr5 (49-108)||(41046832-41046891)
chr5 (49-108)||(42311895-42311954)
chr5 (49-103)||(2959324-2959378)
chr5 (49-103)||(2967793-2967847)
chr5 (57-114)||(7945835-7945892)
chr5 (49-102)||(26898201-26898254)
chr5 (45-113)||(15968310-15968378)
chr5 (49-101)||(18353293-18353345)
chr5 (44-100)||(36419065-36419121)
[»] chr2 (58 HSPs)
chr2 (1-113)||(16241266-16241379)
chr2 (1-114)||(6761501-6761615)
chr2 (1-114)||(25891942-25892056)
chr2 (1-114)||(7765792-7765906)
chr2 (1-114)||(29866118-29866232)
chr2 (1-108)||(32197412-32197520)
chr2 (1-115)||(1944531-1944646)
chr2 (1-107)||(2100053-2100160)
chr2 (1-103)||(18452605-18452707)
chr2 (1-114)||(32750340-32750454)
chr2 (1-114)||(41260061-41260175)
chr2 (1-114)||(42263468-42263582)
chr2 (1-98)||(43657939-43658037)
chr2 (1-98)||(11363012-11363110)
chr2 (1-114)||(13775747-13775861)
chr2 (1-113)||(20427037-20427150)
chr2 (1-101)||(40430677-40430778)
chr2 (1-114)||(32880943-32881057)
chr2 (1-114)||(44737281-44737394)
chr2 (1-113)||(38598492-38598605)
chr2 (1-103)||(4740746-4740849)
chr2 (5-103)||(11711333-11711432)
chr2 (1-103)||(42341654-42341757)
chr2 (1-102)||(45065590-45065692)
chr2 (35-113)||(20360515-20360593)
chr2 (1-70)||(30864717-30864787)
chr2 (1-77)||(3264958-3265031)
chr2 (1-94)||(22857822-22857916)
chr2 (49-114)||(6761463-6761528)
chr2 (49-113)||(16241352-16241416)
chr2 (49-113)||(25892029-25892093)
chr2 (49-113)||(44737367-44737431)
chr2 (204-250)||(15930847-15930893)
chr2 (49-114)||(11711409-11711474)
chr2 (49-114)||(18452567-18452632)
chr2 (1-103)||(41205499-41205602)
chr2 (49-114)||(29866080-29866145)
chr2 (2-101)||(33913188-33913288)
chr2 (1-103)||(39377872-39377970)
chr2 (57-115)||(12486085-12486143)
chr2 (49-114)||(39377834-39377899)
chr2 (49-113)||(20427000-20427064)
chr2 (49-113)||(41260024-41260088)
chr2 (49-108)||(7765879-7765938)
chr2 (1-99)||(45065616-45065715)
chr2 (49-99)||(11363083-11363133)
chr2 (25-115)||(20555255-20555345)
chr2 (49-103)||(40430751-40430805)
chr2 (49-114)||(13775709-13775774)
chr2 (49-114)||(27182073-27182138)
chr2 (49-114)||(27831615-27831680)
chr2 (49-98)||(30864760-30864809)
chr2 (49-114)||(41205575-41205640)
chr2 (49-102)||(42263555-42263608)
chr2 (41-114)||(42470909-42470982)
chr2 (49-102)||(43658010-43658063)
chr2 (57-114)||(45034396-45034453)
chr2 (49-101)||(32880918-32880970)
[»] chr1 (47 HSPs)
chr1 (1-103)||(14281626-14281729)
chr1 (1-113)||(9301918-9302031)
chr1 (1-114)||(2352345-2352459)
chr1 (1-113)||(23398116-23398229)
chr1 (1-113)||(38830519-38830632)
chr1 (1-114)||(2961102-2961216)
chr1 (1-113)||(10380389-10380502)
chr1 (1-113)||(26545033-26545146)
chr1 (1-103)||(15289809-15289912)
chr1 (1-114)||(10065253-10065367)
chr1 (1-114)||(26550285-26550399)
chr1 (1-114)||(29312475-29312589)
chr1 (1-113)||(28989308-28989421)
chr1 (1-103)||(1673981-1674084)
chr1 (1-103)||(28359080-28359183)
chr1 (1-103)||(33325369-33325472)
chr1 (1-114)||(9548708-9548822)
chr1 (1-113)||(7796089-7796202)
chr1 (1-103)||(40161182-40161285)
chr1 (1-103)||(6784695-6784798)
chr1 (1-114)||(30264772-30264886)
chr1 (1-98)||(45536177-45536275)
chr1 (1-84)||(24594947-24595030)
chr1 (49-114)||(14281588-14281653)
chr1 (49-114)||(38830481-38830546)
chr1 (1-103)||(26733821-26733924)
chr1 (1-113)||(34718927-34719033)
chr1 (49-114)||(2961189-2961254)
chr1 (49-114)||(10380475-10380540)
chr1 (49-114)||(23398078-23398143)
chr1 (49-114)||(2352307-2352372)
chr1 (49-114)||(9302004-9302069)
chr1 (57-113)||(24595011-24595067)
chr1 (49-113)||(29312438-29312502)
chr1 (49-103)||(26733794-26733848)
chr1 (49-114)||(9548670-9548735)
chr1 (49-114)||(34718889-34718954)
chr1 (49-114)||(46320234-46320299)
chr1 (57-117)||(43929438-43929498)
chr1 (1-47)||(23537386-23537433)
chr1 (1-67)||(24463325-24463392)
chr1 (49-103)||(28359156-28359210)
chr1 (49-103)||(28989281-28989335)
chr1 (49-114)||(1674057-1674122)
chr1 (49-98)||(40161258-40161307)
chr1 (25-114)||(49944831-49944920)
chr1 (49-117)||(10065340-10065408)
[»] chr6 (35 HSPs)
chr6 (1-114)||(885600-885714)
chr6 (1-114)||(6047794-6047908)
chr6 (1-114)||(31971028-31971142)
chr6 (1-114)||(33859526-33859640)
chr6 (1-114)||(7405480-7405594)
chr6 (1-114)||(24949629-24949743)
chr6 (1-102)||(34639050-34639152)
chr6 (1-113)||(17225242-17225355)
chr6 (1-114)||(390803-390917)
chr6 (1-116)||(8558910-8559025)
chr6 (1-83)||(6801580-6801663)
chr6 (1-99)||(30686580-30686679)
chr6 (1-114)||(766425-766539)
chr6 (1-103)||(6045690-6045793)
chr6 (1-114)||(14931294-14931403)
chr6 (1-101)||(13144220-13144321)
chr6 (1-59)||(22898889-22898948)
chr6 (44-114)||(22880916-22880986)
chr6 (1-58)||(22880954-22881012)
chr6 (1-81)||(36347-36428)
chr6 (57-114)||(22898851-22898908)
chr6 (49-117)||(24949716-24949784)
chr6 (49-113)||(390890-390954)
chr6 (49-113)||(31971115-31971179)
chr6 (49-103)||(7405453-7405507)
chr6 (49-114)||(885687-885752)
chr6 (49-114)||(6045766-6045831)
chr6 (49-102)||(30686554-30686607)
chr6 (49-113)||(14931257-14931321)
chr6 (1-107)||(1158250-1158357)
chr6 (49-103)||(33859499-33859553)
chr6 (49-103)||(34639125-34639179)
chr6 (49-114)||(6047881-6047946)
chr6 (49-113)||(766512-766576)
chr6 (57-101)||(17225336-17225380)
[»] scaffold0123 (2 HSPs)
scaffold0123 (1-108)||(29280-29388)
scaffold0123 (49-113)||(29243-29307)
[»] scaffold0144 (2 HSPs)
scaffold0144 (1-114)||(38861-38975)
scaffold0144 (49-114)||(38823-38888)
[»] scaffold2107 (2 HSPs)
scaffold2107 (1-114)||(479-593)
scaffold2107 (49-102)||(453-506)
[»] chr7 (38 HSPs)
chr7 (1-114)||(5347721-5347835)
chr7 (1-114)||(7107666-7107780)
chr7 (1-114)||(12763265-12763379)
chr7 (1-114)||(20397851-20397965)
chr7 (1-113)||(34281668-34281781)
chr7 (1-114)||(23248666-23248780)
chr7 (1-114)||(30866281-30866395)
chr7 (1-114)||(3411368-3411482)
chr7 (1-114)||(12426528-12426642)
chr7 (1-98)||(19979507-19979606)
chr7 (1-103)||(29770358-29770461)
chr7 (1-103)||(5909480-5909583)
chr7 (1-103)||(10599324-10599428)
chr7 (1-103)||(12085033-12085136)
chr7 (1-113)||(7463485-7463599)
chr7 (1-102)||(26563957-26564059)
chr7 (1-114)||(32050078-32050192)
chr7 (25-77)||(6173997-6174049)
chr7 (7-72)||(15074659-15074725)
chr7 (1-101)||(46680840-46680941)
chr7 (1-114)||(35427657-35427771)
chr7 (49-113)||(23248753-23248817)
chr7 (49-114)||(5909556-5909621)
chr7 (49-113)||(35427744-35427808)
chr7 (1-84)||(46449806-46449890)
chr7 (49-103)||(12763238-12763292)
chr7 (57-114)||(12426623-12426680)
chr7 (41-98)||(36655436-36655493)
chr7 (49-113)||(5347808-5347871)
chr7 (1-72)||(17351512-17351583)
chr7 (49-103)||(3411341-3411395)
chr7 (49-103)||(7107639-7107693)
chr7 (49-103)||(30866254-30866308)
chr7 (49-102)||(12085109-12085162)
chr7 (11-79)||(22055763-22055832)
chr7 (49-98)||(34281754-34281803)
chr7 (49-113)||(20397814-20397878)
chr7 (57-113)||(27231926-27231982)
[»] scaffold0246 (1 HSPs)
scaffold0246 (1-103)||(15191-15293)
[»] scaffold0002 (2 HSPs)
scaffold0002 (1-114)||(492303-492417)
scaffold0002 (49-102)||(492390-492443)
[»] scaffold0221 (2 HSPs)
scaffold0221 (1-113)||(11066-11179)
scaffold0221 (49-114)||(11028-11093)
[»] scaffold0592 (1 HSPs)
scaffold0592 (1-114)||(415-529)
[»] scaffold0007 (2 HSPs)
scaffold0007 (1-113)||(77344-77457)
scaffold0007 (49-114)||(77430-77494)
[»] scaffold0024 (2 HSPs)
scaffold0024 (1-113)||(35990-36103)
scaffold0024 (49-114)||(35952-36017)
[»] scaffold0009 (2 HSPs)
scaffold0009 (16-103)||(3640-3728)
scaffold0009 (57-113)||(3733-3789)
[»] scaffold0067 (1 HSPs)
scaffold0067 (15-99)||(5266-5351)
[»] scaffold0421 (1 HSPs)
scaffold0421 (170-250)||(4678-4759)
[»] scaffold0018 (1 HSPs)
scaffold0018 (1-84)||(183821-183904)


Alignment Details
Target: chr4 (Bit Score: 92; Significance: 9e-45; HSPs: 69)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 4 - 114
Target Start/End: Original strand, 20688455 - 20688566
Alignment:
Q  4 tagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggac 102  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||    
T  20688455 tagatacattgaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatctaaaaagtcaactgtctcttgtaaataggac 20688554  T
Q  103 cagaggtagtat 114  Q
    | ||||||||||    
T  20688555 cggaggtagtat 20688566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 36099523 - 36099637
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||| | |||||||||||||||||||    
T  36099523 ttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatctaaaaaatcaactgtctcttgtaaatag 36099622  T
Q  100 gaccagaggtagtat 114  Q
    |||| |||| |||||    
T  36099623 gaccggagggagtat 36099637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 53621440 - 53621326
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    |||||||||||||||||||||||| |||||||||||||||||| | ||||||||||||||||||||||||||| |||||| |||||||||||||||||||    
T  53621440 ttttagatacattgaataatttatgtatttggtttaggttcttcattagatacatacattattcaatgtatctaaaaagtcaactgtctcttgtaaatag 53621341  T
Q  100 gaccagaggtagtat 114  Q
    |||| |||| |||||    
T  53621340 gaccggagggagtat 53621326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 4758889 - 4758775
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||||||| |||||||||| |||||| ||||||||||| ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||    
T  4758889 ttttagatacattaaataatttatgtatttgatttaggttcttaactagatacatacattattcaatgtatctaaaaagtcaactgtctcttgtaaatag 4758790  T
Q  100 gaccagaggtagtat 114  Q
    |||| |||| |||||    
T  4758789 gaccggagggagtat 4758775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 2385307 - 2385190
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||||||| |||||||||| ||||| |||||| ||||||||||||||||||||||||||||||||||| |||||| |||| ||||||||||||||    
T  2385307 ttttagatacattaaataatttatgtattttgtttagattcttgactagatacatacattattcaatgtatctaaaaagtcaactttctcttgtaaatag 2385208  T
Q  100 gaccagaggtagtatcat 117  Q
    |||| |||| ||||||||    
T  2385207 gaccggagggagtatcat 2385190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 31227307 - 31227410
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| |||||| |||| ||||||||||||||    
T  31227307 ttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattatttaatgtatctaaaaagtcaactttctcttgtaaatag 31227406  T
Q  100 gacc 103  Q
    ||||    
T  31227407 gacc 31227410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 38688023 - 38687910
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||||||| |||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| |||||| |||| |||||||||||||     
T  38688023 ttttagatacattaaataatttatgtatttggtttaggttcttgactagatacgtacattattcaatgtatctaaaaagtcaactttctcttgtaaataa 38687924  T
Q  100 gaccagaggtagta 113  Q
    |||| |||| ||||    
T  38687923 gaccggagggagta 38687910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 49122632 - 49122520
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||| ||| |||||| |||||||||||||||||||    
T  49122632 ttttagatacattgaataatttatatatttggtttaggttcttaactagatacatacattattcaatgt-tctaaaaagtcaactgtctcttgtaaatag 49122534  T
Q  100 gaccagaggtagta 113  Q
     ||| |||| ||||    
T  49122533 aaccggagggagta 49122520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 18135425 - 18135310
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaa--agttaactgtctcttgtaaat 97  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||| | |||  ||| |||| ||||||||||||    
T  18135425 ttttagatacattgaataatttatgtatttgatttaggttcttgactagatacatacattattcaatgtatttaaaaagagtcaactttctcttgtaaat 18135326  T
Q  98 aggaccagaggtagta 113  Q
    ||||||||||| ||||    
T  18135325 aggaccagagggagta 18135310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 31854491 - 31854388
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||||||| |||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| |||||| |||| |||||||||| |||    
T  31854491 ttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattcaatgtatctaaaaagtcaactttctcttgtaattag 31854392  T
Q  100 gacc 103  Q
    ||||    
T  31854391 gacc 31854388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 39877439 - 39877541
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| || |||||| |||| ||||||||||||||    
T  39877439 ttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattcaatgtacctaaaaagtcaactttctcttgtaaatag 39877538  T
Q  100 gac 102  Q
    |||    
T  39877539 gac 39877541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 18430367 - 18430251
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaa--agttaactgtctcttgtaaat 97  Q
    ||||||||||||| |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||| | |||  ||| |||| ||||||||||||    
T  18430367 ttttagatacattaaataatttatgtatttgatttaggttcttgactagatacatacattattcaatgtatttaaaaagagtcaactttctcttgtaaat 18430268  T
Q  98 aggaccagaggtagtat 114  Q
    ||||||||||| |||||    
T  18430267 aggaccagagggagtat 18430251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 35328975 - 35329088
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| | |||||| | || ||||||||||| ||    
T  35328975 ttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatttaaaaagtgacctttctcttgtaaacag 35329074  T
Q  100 gaccagaggtagta 113  Q
    |||| |||| ||||    
T  35329075 gaccggagggagta 35329088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 2279560 - 2279660
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||||||| |||||||||| |||||||||||||||| ||||||||||||||||||||| ||||||||| |||||| |||| ||||||||||||||    
T  2279560 ttttagatacattaaataatttatgtatttggtttaggttcatgactagatacatacattattgaatgtatctaaaaagtcaactttctcttgtaaatag 2279659  T
Q  100 g 100  Q
    |    
T  2279660 g 2279660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 6246644 - 6246760
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||| | ||||||| |||||| ||||||||| |||||| |||| ||||||||||||||    
T  6246644 ttttagatacattaaataatttatgtatttggtttaggttcttgaccaaatacatatattattgaatgtatctaaaaagtcaactttctcttgtaaatag 6246743  T
Q  100 gaccagaggtagtatca 116  Q
    |||| |||| |||||||    
T  6246744 gaccggagggagtatca 6246760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 5970391 - 5970288
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||| ||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||| ||| || |||||||    
T  5970391 ttttagacacattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatctaaaaagtcaactttcttttataaatag 5970292  T
Q  100 gacc 103  Q
    ||||    
T  5970291 gacc 5970288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 19485608 - 19485722
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||| ||||||| |||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| |||| | || | ||||||||||||||    
T  19485608 ttttaaatacattaaataatttatgtatttggtttaggttcttgattagatacatacattattcaatgtatctaaaaaatcaattttctcttgtaaatag 19485707  T
Q  100 gaccagaggtagtat 114  Q
    |||| |||| |||||    
T  19485708 gaccggagggagtat 19485722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 55292224 - 55292110
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||||||| |||||||||| |||||| |||||||||| ||||||||| |||||||||||||||||||| |||||| || | ||||||||||||||    
T  55292224 ttttagatacattaaataatttatgtatttgatttaggttctcgactagatatatacattattcaatgtatctaaaaagtcaaatttctcttgtaaatag 55292125  T
Q  100 gaccagaggtagtat 114  Q
    |||| |||| |||||    
T  55292124 gaccggaggaagtat 55292110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 580523 - 580409
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||||||| |||||||||| ||||||||||||||| |||||| |||||||||||||||||| |||||| |||||| || | ||||||||||||||    
T  580523 ttttagatacattaaataatttatgtatttggtttaggtttttgactggatacatacattattcaacgtatctaaaaagtcaattttctcttgtaaatag 580424  T
Q  100 gaccagaggtagtat 114  Q
    || | |||| |||||    
T  580423 gatcggagggagtat 580409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 23125682 - 23125780
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaata 98  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| |||  | |||| |||||||||||||    
T  23125682 ttttagatacattaaataatttatgtatttggtttaggttcttgactaaatacatacattattcaatgtatctaaaatatcaactttctcttgtaaata 23125780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 47948975 - 47949076
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| |||| | |||| |||||| ||| |||    
T  47948975 ttttagatacattaaataatttatgtatttggtttaggttcttgactaaatacatacattattcaatgtatctaaaaaatcaactttctcttataattag 47949074  T
Q  100 ga 101  Q
    ||    
T  47949075 ga 47949076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 21221153 - 21221261
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||| |||||||||||||||| |||||| | || |||||| |||| ||    
T  21221153 ttttagatacattaaataatttatgtatttggtttaggttattgactagatacatatattattcaatgtatctaaaaagtgatctttctcttataaacag 21221252  T
Q  100 gaccagagg 108  Q
    |||| ||||    
T  21221253 gacccgagg 21221261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 3085984 - 3085877
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||||||| |||||||||| ||||||||||| ||| ||||||| |||||||||||||||||||| ||| ||||||||  | ||||||||||||||    
T  3085984 ttttagatacattaaataatttatgtatttggtttatgttattgactaaatacatacattattcaatgt-tctaaaaagttatttttctcttgtaaatag 3085886  T
Q  100 gaccagagg 108  Q
    |||| ||||    
T  3085885 gacccgagg 3085877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 2411952 - 2411838
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||||||| |||||||||| ||||| |||||| ||||||||||||||||||||||||||||||||| | |||||| | || |||||| |||| ||    
T  2411952 ttttagatacattaaataatttatgtatttagtttagattcttgactagatacatacattattcaatgtatttaaaaagtgatctttctcttataaacag 2411853  T
Q  100 gaccagaggtagtat 114  Q
     ||| |||| |||||    
T  2411852 aaccggagggagtat 2411838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 15170995 - 15170881
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    |||||||||||||||||||||||| |||||| |||| |||||||| ||| |||||| |||||||||||||| | |||||| || | |||||||||||||     
T  15170995 ttttagatacattgaataatttatgtatttgatttatgttcttgattagttacatatattattcaatgtatttaaaaagtcaattttctcttgtaaataa 15170896  T
Q  100 gaccagaggtagtat 114  Q
    |||| |||| |||||    
T  15170895 gaccggagggagtat 15170881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 52536063 - 52535965
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaata 98  Q
    ||||| ||||||| |||||||||| |||||| |||||||| || ||||||||||||||||||||||||||||| ||||||||||| | |||| ||||||    
T  52536063 ttttatatacattaaataatttatgtatttgatttaggtttttaactagatacatacattattcaatgtatctaaaaagttaactttttcttataaata 52535965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 56216270 - 56216368
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaata 98  Q
    ||||||||||||| |||||||||| |||||||||| | ||||| |||| |||||||||||||||||||||||| |||||| |||| |||||| ||||||    
T  56216270 ttttagatacattaaataatttatgtatttggtttggattcttaactaaatacatacattattcaatgtatctaaaaagtcaactttctcttataaata 56216368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 21229262 - 21229338
Alignment:
Q  2 tttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaa 77  Q
    |||| ||||||| |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| ||||    
T  21229262 tttaaatacattaaataatttatgtatttggtttaggttcttgactaaatacatacattattcaatgtatctaaaaa 21229338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 7350318 - 7350252
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaat 66  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||||||||||| ||||||||||    
T  7350318 ttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatatattattcaat 7350252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 25 - 103
Target Start/End: Complemental strand, 32517857 - 32517779
Alignment:
Q  25 tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggacc 103  Q
    |||||| ||||| |||||||||||||||||| |||||||||||||||| |||||| |||| |||||| |||||||||||    
T  32517857 tatttgatttagattcttgactagatacatatattattcaatgtatctaaaaagtcaactttctcttataaataggacc 32517779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 39834310 - 39834380
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtat 70  Q
    ||||||||||||| |||||||||| ||||| |||||||||||||| |||||||||||||||||||||||||    
T  39834310 ttttagatacattaaataatttatatattttgtttaggttcttgattagatacatacattattcaatgtat 39834380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 44200084 - 44199970
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||||| | |||||||||| |||||||||||| ||| |||||||||| |||||||||||||| ||||  |||| | |||| ||||||||||||||    
T  44200084 ttttagatacactaaataatttatgtatttggtttagattcctgactagatatatacattattcaatatatcaaaaaaatcaactttctcttgtaaatag 44199985  T
Q  100 gaccagaggtagtat 114  Q
     ||| |||| |||||    
T  44199984 aaccggagggagtat 44199970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 53303772 - 53303849
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaa 77  Q
    ||||||||||| | |||||||||| |||||||||||| |||||||||| |||||||||||||||||||||||| ||||    
T  53303772 ttttagatacactaaataatttatgtatttggtttagattcttgactaaatacatacattattcaatgtatctaaaaa 53303849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 4698659 - 4698760
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    |||||||||||||||||||||||| ||| |||||||| |||| ||| | ||||||| |||||||||||||||| |||| | || ||| | ||||||||||    
T  4698659 ttttagatacattgaataatttatgtatctggtttagattctagaccatatacataaattattcaatgtatctaaaaaatcaattgtttattgtaaatag 4698758  T
Q  100 ga 101  Q
    ||    
T  4698759 ga 4698760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 15 - 103
Target Start/End: Complemental strand, 29833363 - 29833274
Alignment:
Q  15 aataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggacc 103  Q
    |||||||||| |||||| |||||||||||||||| ||||||| ||| |||||||||||| |||||| || | | ||||||||||||||||    
T  29833363 aataatttatgtatttgatttaggttcttgactaaatacatatattcttcaatgtatctaaaaagtcaattttatcttgtaaataggacc 29833274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 49 - 114
Target Start/End: Original strand, 53621413 - 53621478
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggaccagaggtagtat 114  Q
    ||||||| |||||||||||||||| |||||| || |||||||||||||||||||| ||||||||||    
T  53621413 atacataaattattcaatgtatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtat 53621478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 49 - 113
Target Start/End: Original strand, 18135398 - 18135462
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggaccagaggtagta 113  Q
    ||||||| |||||||||||||||| |||||| || |||||||||||||||||||| |||||||||    
T  18135398 atacataaattattcaatgtatctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 18135462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 51833048 - 51833120
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatct 72  Q
    ||||||||||||| |||||||||| |||||||||||||||||||| || ||| |||||||||||| |||||||    
T  51833048 ttttagatacattaaataatttatgtatttggtttaggttcttgaataaatatatacattattcattgtatct 51833120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 4698735 - 4698621
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    |||||||||||||||||||||||| ||| |||| |||  |||  || ||||||||| |||||||||||||||| |||| | || ||| ||||||||| ||    
T  4698735 ttttagatacattgaataatttatgtatatggtctagaatctaaaccagatacataaattattcaatgtatctaaaaattcaattgtttcttgtaaaaag 4698636  T
Q  100 gaccagaggtagtat 114  Q
    || |||||| |||||    
T  4698635 gatcagagggagtat 4698621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 49 - 114
Target Start/End: Original strand, 4758862 - 4758927
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggaccagaggtagtat 114  Q
    ||||||| |||||| ||||||||| |||||| || |||||||||||||||||||| ||||||||||    
T  4758862 atacataaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtat 4758927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 49 - 114
Target Start/End: Complemental strand, 36099550 - 36099485
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggaccagaggtagtat 114  Q
    ||||||| |||||| ||||||||| |||||| || |||||||||||||||||||| ||||||||||    
T  36099550 atacataaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtat 36099485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 49 - 117
Target Start/End: Complemental strand, 23125709 - 23125641
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggaccagaggtagtatcat 117  Q
    ||||||| |||||| ||||||||| |||||| || |||||||||||||||||||| |||| ||||||||    
T  23125709 atacataaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccggagggagtatcat 23125641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 98
Target Start/End: Original strand, 38046660 - 38046744
Alignment:
Q  15 aataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaata 98  Q
    |||||||||| |||||||||||| || ||||||| |||||||||||||||||||||||| |||| | |||| | |||| ||||||    
T  38046660 aataatttatgtatttggtttagatttttgactaaatacatacattattcaatgtatctaaaaaatcaactttatcttataaata 38046744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 57 - 113
Target Start/End: Original strand, 49122613 - 49122669
Alignment:
Q  57 attattcaatgtatcttaaaagttaactgtctcttgtaaataggaccagaggtagta 113  Q
    |||||||||||||||| |||||| || |||||||||||||||||||| |||||||||    
T  49122613 attattcaatgtatctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 49122669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 49 - 114
Target Start/End: Original strand, 580496 - 580561
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggaccagaggtagtat 114  Q
    ||||||| |||||| ||||||||| |||| | || |||||||||||||||||||| ||||||||||    
T  580496 atacataaattatttaatgtatctaaaaaataaattgtctcttgtaaataggaccggaggtagtat 580561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 49 - 106
Target Start/End: Complemental strand, 2279587 - 2279530
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggaccaga 106  Q
    ||||||| |||||| ||||||||| |||||| || |||||||||||||||||||||||    
T  2279587 atacataaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccaga 2279530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 49 - 114
Target Start/End: Original strand, 2385280 - 2385345
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggaccagaggtagtat 114  Q
    ||||||| |||||| ||||||||| |||| | || ||||||||||||||||||||||||| |||||    
T  2385280 atacataaattatttaatgtatctaaaaattaaattgtctcttgtaaataggaccagagggagtat 2385345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 49 - 103
Target Start/End: Original strand, 18430340 - 18430394
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggacc 103  Q
    ||||||| |||||| ||||||||| |||||| || ||||||||||||||||||||    
T  18430340 atacataaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggacc 18430394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 56216346 - 56216232
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    |||||||||||||||||||| ||| ||||| ||| ||  ||   || | ||||||| |||||| ||||||||| |||||| || ||||||||||||||||    
T  56216346 ttttagatacattgaataatgtatgtatttagttaagaatccaaaccaaatacataaattatttaatgtatctaaaaagtaaattgtctcttgtaaatag 56216247  T
Q  100 gaccagaggtagtat 114  Q
     | |||||| |||||    
T  56216246 aatcagaggaagtat 56216232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 57 - 114
Target Start/End: Complemental strand, 7350242 - 7350185
Alignment:
Q  57 attattcaatgtatcttaaaagttaactgtctcttgtaaataggaccagaggtagtat 114  Q
    |||||||||||||||| ||| || |||| |||||| |||||||||||||||| |||||    
T  7350242 attattcaatgtatctaaaatgtcaactttctcttataaataggaccagaggaagtat 7350185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 49 - 106
Target Start/End: Original strand, 7350291 - 7350348
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggaccaga 106  Q
    ||||||| |||||| ||||||||| |||||| || ||||||||||||||| |||||||    
T  7350291 atacataaattatttaatgtatctaaaaagtaaattgtctcttgtaaatatgaccaga 7350348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 49 - 102
Target Start/End: Complemental strand, 27006568 - 27006515
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggac 102  Q
    ||||||| |||||| ||||||||| |||||| || |||||||||||||||||||    
T  27006568 atacataaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggac 27006515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 49 - 114
Target Start/End: Original strand, 38687996 - 38688061
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggaccagaggtagtat 114  Q
    ||||||| |||||| ||||||||| |||||| || ||| |||||||||||||||| |||| |||||    
T  38687996 atacataaattatttaatgtatctaaaaagtaaattgtttcttgtaaataggaccggagggagtat 38688061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 49 - 114
Target Start/End: Complemental strand, 47949002 - 47948937
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggaccagaggtagtat 114  Q
    ||||||| |||||| ||||||||| |||||| || |||||||||||| ||||||  ||||||||||    
T  47949002 atacataaattatttaatgtatctaaaaagtaaattgtctcttgtaagtaggactggaggtagtat 47948937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 113
Target Start/End: Original strand, 3085957 - 3086021
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggaccagaggtagta 113  Q
    ||||||| |||||| ||||||||| |||| | || |||||||||||||||||||| |||| ||||    
T  3085957 atacataaattatttaatgtatctaaaaaataaattgtctcttgtaaataggaccggagggagta 3086021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 102
Target Start/End: Original strand, 2411920 - 2411978
Alignment:
Q  44 actagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggac 102  Q
    |||| ||||||| |||||| ||||||||| |||||| || ||| |||||||||||||||    
T  2411920 actaaatacataaattatttaatgtatctaaaaagtaaattgtttcttgtaaataggac 2411978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 103
Target Start/End: Original strand, 5970364 - 5970418
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggacc 103  Q
    ||||||| |||||| ||||| ||| |||||| || ||||||||||||||||||||    
T  5970364 atacataaattatttaatgtgtctaaaaagtaaattgtctcttgtaaataggacc 5970418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 99
Target Start/End: Complemental strand, 6246671 - 6246621
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||| |||||| ||||||||| |||||| || ||||||||||||||||    
T  6246671 atacataaattatttaatgtatctaaaaagtaaattgtctcttgtaaatag 6246621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 103
Target Start/End: Complemental strand, 31227334 - 31227280
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggacc 103  Q
    ||||||| |||||| ||||||||| |||||| || ||| ||||||||||||||||    
T  31227334 atacataaattatttaatgtatctaaaaagtaaattgtttcttgtaaataggacc 31227280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 103
Target Start/End: Original strand, 31854464 - 31854518
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggacc 103  Q
    ||||||| |||||| ||||||||| |||||| || ||| ||||||||||||||||    
T  31854464 atacataaattatttaatgtatctaaaaagtaaattgtttcttgtaaataggacc 31854518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 43413653 - 43413584
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtat 70  Q
    ||||||||| |||| ||| ||||| ||| |||||||| ||| |||||| ||||||||||||||||||||||    
T  43413653 ttttagatatattggata-tttatgtatctggtttagattcatgactacatacatacattattcaatgtat 43413584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 103
Target Start/End: Complemental strand, 51833075 - 51833021
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggacc 103  Q
    ||||||| |||||| ||||||||| |||| | || ||||||||||||||||||||    
T  51833075 atacataaattatttaatgtatctaaaaaataaattgtctcttgtaaataggacc 51833021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 103
Target Start/End: Original strand, 52536036 - 52536090
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggacc 103  Q
    ||||||| |||||| ||||||| | ||||||||| ||| ||||||||||||||||    
T  52536036 atacataaattatttaatgtatataaaaagttaattgtatcttgtaaataggacc 52536090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 57 - 114
Target Start/End: Original strand, 20459333 - 20459390
Alignment:
Q  57 attattcaatgtatcttaaaagttaactgtctcttgtaaataggaccagaggtagtat 114  Q
    |||||| |||| |||| ||||||||||| | |||| ||||||||||| ||||||||||    
T  20459333 attattgaatgaatctaaaaagttaactttttcttataaataggaccggaggtagtat 20459390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 57 - 114
Target Start/End: Complemental strand, 42804311 - 42804254
Alignment:
Q  57 attattcaatgtatcttaaaagttaactgtctcttgtaaataggaccagaggtagtat 114  Q
    |||||| |||| |||| ||||||||||| | |||| ||||||||||| ||||||||||    
T  42804311 attattgaatgaatctaaaaagttaactttttcttataaataggaccggaggtagtat 42804254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 57 - 114
Target Start/End: Complemental strand, 47866091 - 47866034
Alignment:
Q  57 attattcaatgtatcttaaaagttaactgtctcttgtaaataggaccagaggtagtat 114  Q
    |||||| |||| |||| ||||||||||| | |||| ||||||||||| ||||||||||    
T  47866091 attattgaatgaatctaaaaagttaactttttcttataaataggaccggaggtagtat 47866034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 31240878 - 31240974
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaa 96  Q
    |||||||||  ||||||||||||| ||| |||||||   |||  |||| |||||||  ||||||||||||| | ||||||||| ||| |||||||||    
T  31240878 ttttagatattttgaataatttatgtatctggtttaaaatctaaactaaatacataatttattcaatgtatttaaaaagttaattgtttcttgtaaa 31240974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 49 - 113
Target Start/End: Complemental strand, 39877466 - 39877402
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggaccagaggtagta 113  Q
    ||||||| |||||| ||||||||| |||||| ||  || |||||||||||||||| |||| ||||    
T  39877466 atacataaattatttaatgtatctaaaaagtaaatcgtttcttgtaaataggaccggagggagta 39877402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 49 - 113
Target Start/End: Original strand, 44200057 - 44200121
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggaccagaggtagta 113  Q
    ||||||| |||||| | ||||||| |||||| || ||||||||||||||| |||| |||| ||||    
T  44200057 atacataaattatttagtgtatctaaaaagtaaattgtctcttgtaaataagaccggagggagta 44200121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 91; Significance: 4e-44; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 43135080 - 43135194
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||    
T  43135080 ttttagatacattgaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatctaaaaagtcaactgtctcttgtaaatag 43135179  T
Q  100 gaccagaggtagtat 114  Q
    |||| |||| |||||    
T  43135180 gaccggaggaagtat 43135194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 2229182 - 2229068
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| |||||| |||||||||||||||||||    
T  2229182 ttttagatacattgaataatttatgtatttggtttaggttcttgactagatacatacattattcattgtatctaaaaagtcaactgtctcttgtaaatag 2229083  T
Q  100 gaccagaggtagtat 114  Q
    |||| |||| |||||    
T  2229082 gaccggagggagtat 2229068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 2339326 - 2339443
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||| ||||||||||||||    
T  2339326 ttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatctaaaaagtcaactttctcttgtaaatag 2339425  T
Q  100 gaccagaggtagtatcat 117  Q
    |||| |||| ||||||||    
T  2339426 gaccggagggagtatcat 2339443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 25848003 - 25848116
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| |||||| |||||||||||||||||||    
T  25848003 ttttagatacattaaataatttatgtatttggtttaggttcttgactaaatacatacattattcaatgtatctaaaaagtcaactgtctcttgtaaatag 25848102  T
Q  100 gaccagaggtagta 113  Q
    |||| |||||||||    
T  25848103 gaccggaggtagta 25848116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 30924033 - 30923920
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||||||| |||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| |||||| |||||||||||||||||||    
T  30924033 ttttagatacattaaataatttatgtatttggtttaggttcttgattagatacatacattattcaatgtatctaaaaagtcaactgtctcttgtaaatag 30923934  T
Q  100 gaccagaggtagta 113  Q
    |||| |||| ||||    
T  30923933 gaccggaggaagta 30923920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 34028419 - 34028533
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| || |||| ||||||||||||||    
T  34028419 ttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatctaaaaggtcaactttctcttgtaaatag 34028518  T
Q  100 gaccagaggtagtat 114  Q
    |||| |||| |||||    
T  34028519 gaccggagggagtat 34028533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 29563694 - 29563808
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||||||| |||||||||| |||||||||||||||||| ||||||||||||||||||| ||||||||| |||||| |||| ||||||||||||||    
T  29563694 ttttagatacattaaataatttatgtatttggtttaggttcttaactagatacatacattattgaatgtatctaaaaagtcaactttctcttgtaaatag 29563793  T
Q  100 gaccagaggtagtat 114  Q
    |||| |||| |||||    
T  29563794 gaccggaggaagtat 29563808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 40465350 - 40465236
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| || | ||||||||||||||    
T  40465350 ttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatctaaaaagtcaattttctcttgtaaatag 40465251  T
Q  100 gaccagaggtagtat 114  Q
    || | |||| |||||    
T  40465250 gatcggagggagtat 40465236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 43295175 - 43295074
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||| ||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| |||||||    
T  43295175 ttttatatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatctaaaaagttaactttctcttataaatag 43295076  T
Q  100 ga 101  Q
    ||    
T  43295075 ga 43295074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 22781918 - 22782032
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||  |||| | |||| |||||| |||||||    
T  22781918 ttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatccaaaaaatcaactttctcttataaatag 22782017  T
Q  100 gaccagaggtagtat 114  Q
    |||| |||| |||||    
T  22782018 gaccggaggaagtat 22782032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 41915630 - 41915744
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||||||| |||||||||| |||||||||||| || |||||||||||||||||||||||||||||||| |||||| || | ||||||||||||||    
T  41915630 ttttagatacattaaataatttatgtatttggtttagattattgactagatacatacattattcaatgtatctaaaaagtcaattttctcttgtaaatag 41915729  T
Q  100 gaccagaggtagtat 114  Q
    |||| |||| |||||    
T  41915730 gaccggagggagtat 41915744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 33642494 - 33642597
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| |||| | |||| |||||||||||||     
T  33642494 ttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatatattattcaatgtatctaaaaaatcaactttctcttgtaaataa 33642593  T
Q  100 gacc 103  Q
    ||||    
T  33642594 gacc 33642597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 41569208 - 41569100
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||| ||| |||||||||| ||||||||| |||||||||||||||||||||||||||||||| ||||| |||| | |||| ||||||||||||||    
T  41569208 ttttagatatattaaataatttatgtatttggttgaggttcttgactagatacatacattattcaatatatctaaaaaatcaactttctcttgtaaatag 41569109  T
Q  100 gaccagagg 108  Q
    |||| ||||    
T  41569108 gaccggagg 41569100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 7668227 - 7668330
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||| | |||||  || | ||||||||||||||    
T  7668227 ttttagatacattaaataatttatgtatttggtttaggttcttgactaaatacatacattattcaatgtatttaaaaagacaattttctcttgtaaatag 7668326  T
Q  100 gacc 103  Q
    ||||    
T  7668327 gacc 7668330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 11293299 - 11293196
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||| ||||||| ||| |||||| ||  |||||||||||||||||||||||||||||||||||||||||||| |||||| |||| ||||||||||||||    
T  11293299 ttttaaatacattaaatcatttatgtaaatggtttaggttcttgactagatacatacattattcaatgtatctaaaaagtcaactttctcttgtaaatag 11293200  T
Q  100 gacc 103  Q
    ||||    
T  11293199 gacc 11293196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 32159146 - 32159043
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||||||| |||||||||| |||||||||||| ||||||| ||||||||||||||||| ||||||||| |||||| || | ||||||||||||||    
T  32159146 ttttagatacattaaataatttatgtatttggtttagattcttgattagatacatacattatttaatgtatctaaaaagtcaaatttctcttgtaaatag 32159047  T
Q  100 gacc 103  Q
    ||||    
T  32159046 gacc 32159043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 42351310 - 42351196
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||||||| |||||||||| |||||| |||||||||||||||||||||||| |||||| ||||||||| |||||| |||  |||||||||||||     
T  42351310 ttttagatacattaaataatttatatatttgatttaggttcttgactagatacatatattatttaatgtatctaaaaagtcaacattctcttgtaaataa 42351211  T
Q  100 gaccagaggtagtat 114  Q
    |||| |||| |||||    
T  42351210 gaccggagggagtat 42351196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 27793233 - 27793346
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    |||||||| |||| |||||||||| ||||||||||||||||||||| ||||| |||||||||| ||| ||||| |||||| |||| ||||||||||||||    
T  27793233 ttttagatgcattaaataatttatgtatttggtttaggttcttgaccagatatatacattattgaatatatctaaaaagtcaactttctcttgtaaatag 27793332  T
Q  100 gaccagaggtagta 113  Q
    |||| |||| ||||    
T  27793333 gaccggagggagta 27793346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 34157697 - 34157810
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||  |||| | || | ||||||||||||||    
T  34157697 ttttagatacattaaataatttatgtatttggtttaggttcttgactaaatacatacattattcgatgtatccaaaaattcaaatttctcttgtaaatag 34157796  T
Q  100 gaccagaggtagta 113  Q
    |||| |||| ||||    
T  34157797 gaccggagggagta 34157810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 40834172 - 40834273
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| |||||  || | |||||| |||||||    
T  40834172 ttttagatacattaaataatttatgtatttggtttaggttcttgactaaatacatacattattcaatgtatctaaaaagacaattttctcttataaatag 40834271  T
Q  100 ga 101  Q
    ||    
T  40834272 ga 40834273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 37564743 - 37564640
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||| ||||||| |||||||||| |||||||||||||||||| ||||||| ||||||||||||||||||| | |||||| |||| |||||| |||||||    
T  37564743 ttttaaatacattaaataatttatgtatttggtttaggttcttaactagatgcatacattattcaatgtatttaaaaagtcaactttctcttataaatag 37564644  T
Q  100 gacc 103  Q
    ||||    
T  37564643 gacc 37564640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 3799828 - 3799714
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||| ||||||| |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||| |||||   ||| |||||| ||||| |    
T  3799828 ttttaaatacattaaataatttatgtatttggtttagattcttgactagatacatacattattcaatgtatctaaaaagccgactttctcttataaatgg 3799729  T
Q  100 gaccagaggtagtat 114  Q
    |||| |||| |||||    
T  3799728 gaccggagggagtat 3799714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 45145905 - 45146014
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||||||| |||||||||| | |||||||||||||||||||||    ||||||||||||||||||||| |||||| || | ||||||||||||||    
T  45145905 ttttagatacattaaataatttatgtttttggtttaggttcttgacta----catacattattcaatgtatctaaaaagtcaattttctcttgtaaatag 45146000  T
Q  100 gaccagaggtagta 113  Q
    |||| |||| ||||    
T  45146001 gaccggagggagta 45146014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 42189839 - 42189942
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||| ||| ||| |||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| |||||| |||| | || | |||||||    
T  42189839 ttttaaatatattaaataatttatgtatttggtttaggttcttgactagatatatacattattcaatgtatctaaaaagtcaactttatcatataaatag 42189938  T
Q  100 gacc 103  Q
    ||||    
T  42189939 gacc 42189942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 8242259 - 8242373
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||| ||||||| ||| |||||| |||||| ||||||||||||||||||||||||||||||||||||||||| |||| | || | ||| || |||||||    
T  8242259 ttttaaatacattaaatgatttatgtatttgatttaggttcttgactagatacatacattattcaatgtatctaaaaaatcaaatttcttttataaatag 8242358  T
Q  100 gaccagaggtagtat 114  Q
    ||| ||||| |||||    
T  8242359 gactagagggagtat 8242373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 12270168 - 12270070
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaata 98  Q
    ||||||||||||| |||||||||| ||||||||||| ||||||||||| ||| ||| ||||||| |||||||| |||||| |||| |||||||||||||    
T  12270168 ttttagatacattaaataatttatgtatttggtttaagttcttgactaaatatatatattattcgatgtatctaaaaagtcaactttctcttgtaaata 12270070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 25878284 - 25878182
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    |||||||||||||  ||||||||| |||||| |||||||||||||||||||||||||||| |||||||||| | |||||| || | |||||| |||||||    
T  25878284 ttttagatacattatataatttatgtatttgatttaggttcttgactagatacatacattcttcaatgtatttaaaaagtcaattttctcttataaatag 25878185  T
Q  100 gac 102  Q
    |||    
T  25878184 gac 25878182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 33837616 - 33837720
Alignment:
Q  1 ttttagatacattgaataatttatt-atttggtttaggttcttgactagatacatacattattcaatgtatct-taaaagttaactgtctcttgtaaata 98  Q
    ||||||||||||| ||||||||||  |||| |||||| |||||||||||||||||| |||||||||||||| |  |||| | |||| |||||||||||||    
T  33837616 ttttagatacattaaataatttatgcatttagtttagattcttgactagatacataaattattcaatgtatttaaaaaaatcaactttctcttgtaaata 33837715  T
Q  99 ggacc 103  Q
    |||||    
T  33837716 ggacc 33837720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 49 - 113
Target Start/End: Original strand, 2229155 - 2229219
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggaccagaggtagta 113  Q
    ||||||| |||||||||||||||| |||||| || |||||||||||||||||||| |||||||||    
T  2229155 atacataaattattcaatgtatctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 2229219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 15 - 102
Target Start/End: Complemental strand, 16928939 - 16928851
Alignment:
Q  15 aataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggac 102  Q
    |||||||||| |||||||||||| ||||||| |||||||||| |||||||||| ||||| ||| || |||  |||||||||||||||||    
T  16928939 aataatttatgtatttggtttagattcttgagtagatacataaattattcaatttatctaaaatgtcaacattctcttgtaaataggac 16928851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 29916564 - 29916676
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||||||| |||||||||| ||||||||||| ||||||||||| |||| |||| |||||||||||| | |||||| ||   |||||| ||||||     
T  29916564 ttttagatacattaaataatttatgtatttggtttaagttcttgactaaatac-tacaatattcaatgtatataaaaagtcaatcttctcttataaataa 29916662  T
Q  100 gaccagaggtagta 113  Q
    ||| ||||| ||||    
T  29916663 gactagagggagta 29916676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 49 - 114
Target Start/End: Complemental strand, 2339353 - 2339288
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggaccagaggtagtat 114  Q
    ||||||| |||||| ||||||||| |||||| || |||||||||||||||||||| |||| |||||    
T  2339353 atacataaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccggagggagtat 2339288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 49 - 113
Target Start/End: Complemental strand, 29563721 - 29563657
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggaccagaggtagta 113  Q
    ||||||| |||||| ||||||||| |||||| || |||||||||||||||||||| |||| ||||    
T  29563721 atacataaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccggagggagta 29563657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 49 - 108
Target Start/End: Original strand, 12270141 - 12270200
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggaccagagg 108  Q
    ||||||| |||||| ||||||||| |||||| || |||||||||||||||||||| ||||    
T  12270141 atacataaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccggagg 12270200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 51 - 113
Target Start/End: Complemental strand, 45145930 - 45145868
Alignment:
Q  51 acatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggaccagaggtagta 113  Q
    ||||| |||||| ||||||||| |||||| || |||||||||||||||||||| |||| ||||    
T  45145930 acataaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccggagggagta 45145868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 49 - 114
Target Start/End: Complemental strand, 25848030 - 25847965
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggaccagaggtagtat 114  Q
    ||||||| |||||| ||||||||| |||||| || |||||||||||||||||| | ||| ||||||    
T  25848030 atacataaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggatcggagctagtat 25847965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 49 - 114
Target Start/End: Original strand, 30924006 - 30924071
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggaccagaggtagtat 114  Q
    ||||||| |||||| ||||||||| |||||| || ||||| || ||||||||||| ||||||||||    
T  30924006 atacataaattatttaatgtatctaaaaagtaaattgtcttttataaataggaccggaggtagtat 30924071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 101
Target Start/End: Original strand, 32159119 - 32159171
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatagga 101  Q
    ||||||| |||||| ||||||||| |||||| || ||||||||||||||||||    
T  32159119 atacataaattatttaatgtatctaaaaagtaaattgtctcttgtaaatagga 32159171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 113
Target Start/End: Complemental strand, 33642521 - 33642457
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggaccagaggtagta 113  Q
    ||||||| |||||| ||||||||| |||||| || | |||||||||||||||||| |||| ||||    
T  33642521 atacataaattatttaatgtatctaaaaagtaaattatctcttgtaaataggaccggagggagta 33642457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 49 - 108
Target Start/End: Complemental strand, 22781945 - 22781886
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggaccagagg 108  Q
    ||||||| |||||| ||||||||| |||||| || ||| |||||||||||||||| ||||    
T  22781945 atacataaattatttaatgtatctaaaaagtaaattgtttcttgtaaataggaccggagg 22781886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 103
Target Start/End: Original strand, 37564716 - 37564770
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggacc 103  Q
    ||||||| |||||| ||||||| | |||||| || ||||||||||||||||||||    
T  37564716 atacataaattatttaatgtatttaaaaagtaaattgtctcttgtaaataggacc 37564770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 57 - 110
Target Start/End: Complemental strand, 32575226 - 32575173
Alignment:
Q  57 attattcaatgtatcttaaaagttaactgtctcttgtaaataggaccagaggta 110  Q
    |||||| |||| |||| ||||||||||| | |||||||||||||||| ||||||    
T  32575226 attattgaatgaatctaaaaagttaactttttcttgtaaataggaccggaggta 32575173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 52 - 113
Target Start/End: Complemental strand, 33837640 - 33837579
Alignment:
Q  52 catacattattcaatgtatcttaaaagttaactgtctcttgtaaataggaccagaggtagta 113  Q
    |||| |||||| ||||||||| |||||| || |||||||||||||||| ||| |||| ||||    
T  33837640 cataaattatttaatgtatctaaaaagtaaattgtctcttgtaaatagaaccggagggagta 33837579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 49 - 114
Target Start/End: Complemental strand, 41915657 - 41915592
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggaccagaggtagtat 114  Q
    ||||||| |||||| ||||||||| |||| | || |||||||| ||||||||||| |||| |||||    
T  41915657 atacataaattatttaatgtatctaaaaattaaattgtctcttataaataggaccggagggagtat 41915592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 49 - 101
Target Start/End: Complemental strand, 7668254 - 7668202
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatagga 101  Q
    ||||||| |||||| ||||||||| |||| | || ||||||||||||||||||    
T  7668254 atacataaattatttaatgtatctaaaaaataaattgtctcttgtaaatagga 7668202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 49 - 113
Target Start/End: Complemental strand, 34028446 - 34028382
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggaccagaggtagta 113  Q
    ||||||| |||||| ||||||||| |||||| || |||  ||||||||||||||| |||| ||||    
T  34028446 atacataaattatttaatgtatctaaaaagtaaattgttacttgtaaataggaccggagggagta 34028382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 49 - 108
Target Start/End: Complemental strand, 40834199 - 40834139
Alignment:
Q  49 atacatacattattcaatgtatcttaaaag-ttaactgtctcttgtaaataggaccagagg 108  Q
    ||||||| |||||| ||||||||| ||||  |||| |||||||||||||||||||| ||||    
T  40834199 atacataaattatttaatgtatctaaaaaaattaattgtctcttgtaaataggaccggagg 40834139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 91; Significance: 4e-44; HSPs: 67)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 6087013 - 6086899
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||    
T  6087013 ttttagatacattgaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatctaaaaagtcaactgtctcttgtaaatag 6086914  T
Q  100 gaccagaggtagtat 114  Q
    |||| |||| |||||    
T  6086913 gaccggagggagtat 6086899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 10049704 - 10049818
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| || ||||||||||||||||    
T  10049704 ttttagatacattgaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatctaaaaagtcaattgtctcttgtaaatag 10049803  T
Q  100 gaccagaggtagtat 114  Q
    |||| |||| |||||    
T  10049804 gaccggagggagtat 10049818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 9440240 - 9440132
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||    
T  9440240 ttttagatacattgaataatttatgtatttggtttaagttcttgactagatacatacattattcaatgtatctaaaaagtcaactgtctcttgtaaatag 9440141  T
Q  100 gaccagagg 108  Q
    |||| ||||    
T  9440140 gaccggagg 9440132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 26999057 - 26999171
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| || ||||||||||||||||    
T  26999057 ttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatctaaaaagtcaaatgtctcttgtaaatag 26999156  T
Q  100 gaccagaggtagtat 114  Q
    |||| |||| |||||    
T  26999157 gaccggagggagtat 26999171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 335487 - 335386
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||| ||||||||||||||    
T  335487 ttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatctaaaaagtcaactttctcttgtaaatag 335388  T
Q  100 ga 101  Q
    ||    
T  335387 ga 335386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 19202362 - 19202254
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| |||||| |||| ||||||||||||||    
T  19202362 ttttagatacattaaataatttatgtatttggtttaggttcttgactagatacataccttattcaatgtatctaaaaagtcaactttctcttgtaaatag 19202263  T
Q  100 gaccagagg 108  Q
    |||| ||||    
T  19202262 gaccggagg 19202254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 8243794 - 8243691
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    |||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||| |||||| || |||||||||||||||     
T  8243794 ttttagatacattgaataatttatgtatttggtttagattcttgactagatacatacattattcaatgtatctaaaaagtcaattgtctcttgtaaataa 8243695  T
Q  100 gacc 103  Q
    ||||    
T  8243694 gacc 8243691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 14768134 - 14768242
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| |||| | |||| ||||||||||||||    
T  14768134 ttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatatattattcaatgtatctaaaaaatcaactttctcttgtaaatag 14768233  T
Q  100 gaccagagg 108  Q
    |||| ||||    
T  14768234 gaccggagg 14768242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 29019771 - 29019873
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| |||||| || | ||||||||||||||    
T  29019771 ttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatatattattcaatgtatctaaaaagtcaattttctcttgtaaatag 29019870  T
Q  100 gac 102  Q
    |||    
T  29019871 gac 29019873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 40215012 - 40214899
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||||||| |||||||||| |||||| ||||| |||||||||||||||||||||||| |||||||||| |||||| |||| ||||||||||||||    
T  40215012 ttttagatacattaaataatttatgtatttgatttagattcttgactagatacatacattatccaatgtatctaaaaagtcaactttctcttgtaaatag 40214913  T
Q  100 gaccagaggtagta 113  Q
    |||| |||| ||||    
T  40214912 gaccggagggagta 40214899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 25846623 - 25846515
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||| ||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||| | |||||||| || |||||||    
T  25846623 ttttaaatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatctaaaaaatcaactgtcttttataaatag 25846524  T
Q  100 gaccagagg 108  Q
    |||| ||||    
T  25846523 gaccggagg 25846515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 9465183 - 9465080
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||||||  |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| |||||| |||| | ||||||||||||    
T  9465183 ttttagatacataaaataatttatgtatttgatttaggttcttgactagatacatacattattcaatgtatctaaaaagtcaactttatcttgtaaatag 9465084  T
Q  100 gacc 103  Q
    ||||    
T  9465083 gacc 9465080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 47449952 - 47450055
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| |||| | |||| ||| ||||||||||    
T  47449952 ttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattatttaatgtatctaaaaactcaactttctattgtaaatag 47450051  T
Q  100 gacc 103  Q
    ||||    
T  47450052 gacc 47450055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 18765370 - 18765256
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    |||||||| |||| |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| |||| | |||| |||||||||||||     
T  18765370 ttttagatgcattaaataatttatgtatttggtttaggttcttgactaaatacatacattattcaatgtatctaaaaaatcaactttctcttgtaaatat 18765271  T
Q  100 gaccagaggtagtat 114  Q
    |||| |||| |||||    
T  18765270 gaccggaggaagtat 18765256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 23825185 - 23825283
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaata 98  Q
    ||||||||||||  |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||| |||||| |||| |||||||||||||    
T  23825185 ttttagatacatcaaataatttatgtatttggtttagattcttgactagatacatacattattcaatgtatctaaaaagtcaactttctcttgtaaata 23825283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 51698226 - 51698112
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||||||| |||||||||| ||||||||||| |||| | ||||||||||||||||||| ||||||||| |||||| |||| ||||||||||||||    
T  51698226 ttttagatacattaaataatttatgtatttggtttatgttcattactagatacatacattattgaatgtatctaaaaagtcaactttctcttgtaaatag 51698127  T
Q  100 gaccagaggtagtat 114  Q
    |||| |||| |||||    
T  51698126 gaccggagggagtat 51698112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 21653456 - 21653343
Alignment:
Q  1 ttttagatacattgaataatttatt-atttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||||||| ||||||||||  |||||||||||||||||||||||||| |||||||||||||||||||| |||| | || | ||||||||||||||    
T  21653456 ttttagatacattaaataatttatgcatttggtttaggttcttgactagatatatacattattcaatgtatctaaaaaatcaaatttctcttgtaaatag 21653357  T
Q  100 gaccagaggtagta 113  Q
    |||| |||| ||||    
T  21653356 gaccggagggagta 21653343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 25113461 - 25113348
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    |||| |||||||| |||||||||| |||||||||||||||||||| || |||||||||||||||||||||||| |||||| |||| |||||| |||||||    
T  25113461 ttttcgatacattaaataatttatgtatttggtttaggttcttgattaaatacatacattattcaatgtatctaaaaagtcaactttctcttataaatag 25113362  T
Q  100 gaccagaggtagta 113  Q
    |||| |||| ||||    
T  25113361 gaccggaggaagta 25113348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 28565047 - 28564930
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    |||||||| |||| |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| | |||||| || | ||||||||||||||    
T  28565047 ttttagatgcattaaataatttatgtatttggtttagattcttgactagatacatacattattcaatgtatataaaaagtcaattttctcttgtaaatag 28564948  T
Q  100 gaccagaggtagtatcat 117  Q
    |||| |||| ||| ||||    
T  28564947 gaccggagggagtttcat 28564930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 1122311 - 1122414
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||||||| |||||||||| |||||  |||||||||||||||||||||||||||| |||||||||||| |||||| || | ||||||||||||||    
T  1122311 ttttagatacattaaataatttatgtatttattttaggttcttgactagatacatacattcttcaatgtatctaaaaagtcaattttctcttgtaaatag 1122410  T
Q  100 gacc 103  Q
    ||||    
T  1122411 gacc 1122414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 28945692 - 28945806
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||||||| |||||||||| |||||||||||||||||| |||||| |||||||||||| ||| ||||| |||||| || | ||||||||||||||    
T  28945692 ttttagatacattaaataatttatgtatttggtttaggttcttaactagaaacatacattattgaatatatctaaaaagtcaattttctcttgtaaatag 28945791  T
Q  100 gaccagaggtagtat 114  Q
    |||| |||| |||||    
T  28945792 gaccggagggagtat 28945806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 40464558 - 40464672
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| | |||| | |||| | |||| |||||||    
T  40464558 ttttagataaattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatttaaaaaatcaactttatcttataaatag 40464657  T
Q  100 gaccagaggtagtat 114  Q
    |||| |||| |||||    
T  40464658 gaccggagggagtat 40464672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 52114136 - 52114022
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||||||| |||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| |||| | |||| ||||||| | |||     
T  52114136 ttttagatacattaaataatttatgtatttggtttaggttctttactagatacatacattattcaatgtatctaaaaaatcaactttctcttgaagataa 52114037  T
Q  100 gaccagaggtagtat 114  Q
    |||| |||| |||||    
T  52114036 gacccgagggagtat 52114022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 5 - 101
Target Start/End: Original strand, 9190068 - 9190165
Alignment:
Q  5 agatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatagga 101  Q
    ||||||||| |||||||||| |||||||||||  ||||||||||||||||||||||||||||||||||| |||||| |||| |||||| |||||||||    
T  9190068 agatacattaaataatttatgtatttggtttaaattcttgactagatacatacattattcaatgtatctaaaaagtcaactttctcttataaatagga 9190165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 26 - 113
Target Start/End: Original strand, 26123052 - 26123139
Alignment:
Q  26 atttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggaccagaggtagta 113  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||| | || |||||||||||||||||| |||| ||||    
T  26123052 atttggtttaggtttttgactagatacatacattattcaatgtatctaaaaagtcatctttctcttgtaaataggaccggagggagta 26123139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 49122980 - 49123083
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||||||| |||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| |||||| || | | || | |||||||    
T  49122980 ttttagatacattaaataatttatgtatttggtttaggctcttgactagatacatacattattcaatgtatctaaaaagtcaaatttatcctataaatag 49123079  T
Q  100 gacc 103  Q
    ||||    
T  49123080 gacc 49123083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 42605939 - 42605837
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||||||  |||||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||| |||| | |||| | ||||||||||||    
T  42605939 ttttagatacataaaataatttatgtatttagtttaagttcttgactagatacatacattattcaatgtatctaaaaaatcaactttatcttgtaaatag 42605840  T
Q  100 gac 102  Q
    |||    
T  42605839 gac 42605837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 22003832 - 22003945
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    |||||||||||||||||||||||| ||||| |||||| ||||| |||||||||||| |||||||||||||||| |||||| || | ||| || |||||||    
T  22003832 ttttagatacattgaataatttatatatttagtttagattctttactagatacataaattattcaatgtatctaaaaagtcaattttctgttataaatag 22003931  T
Q  100 gaccagaggtagta 113  Q
    |||| |||| ||||    
T  22003932 gaccggaggaagta 22003945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 22011349 - 22011462
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    |||||||||||||||||||||||| ||||| |||||| ||||| |||||||||||| |||||||||||||||| |||||| || | ||| || |||||||    
T  22011349 ttttagatacattgaataatttatatatttagtttagattctttactagatacataaattattcaatgtatctaaaaagtcaattttctgttataaatag 22011448  T
Q  100 gaccagaggtagta 113  Q
    |||| |||| ||||    
T  22011449 gaccggaggaagta 22011462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 42225674 - 42225561
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    |||| |||||||| |||||||||| ||||| ||||||||| |||||||||||||||||||||||||||||||| |||| |||| | | |||||||||| |    
T  42225674 tttttgatacattaaataatttatgtatttagtttaggttattgactagatacatacattattcaatgtatctaaaaaattaattttttcttgtaaatgg 42225575  T
Q  100 gaccagaggtagta 113  Q
    |||| |||| ||||    
T  42225574 gaccggagggagta 42225561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 379106 - 379212
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggtt---cttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaa 96  Q
    ||||||||||||| |||||||||| |||||||||||| ||   |||||||||||||||| |||||||||||||||| |||||| |||| |||||| ||||    
T  379106 ttttagatacattaaataatttatgtatttggtttagattgatcttgactagatacataaattattcaatgtatctaaaaagtcaactttctcttataaa 379205  T
Q  97 taggacc 103  Q
    |||||||    
T  379206 taggacc 379212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 8 - 113
Target Start/End: Original strand, 13826155 - 13826261
Alignment:
Q  8 tacattgaataatttatta-tttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggaccaga 106  Q
    |||||| |||||||||| | |||| |||||||||||||||| ||||||||||| |||||||||||| |||||| |||| |||||||||||||| ||| ||    
T  13826155 tacattaaataatttatgaatttgatttaggttcttgactaaatacatacattcttcaatgtatctaaaaagtcaactttctcttgtaaatagaaccgga 13826254  T
Q  107 ggtagta 113  Q
    || ||||    
T  13826255 ggaagta 13826261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 39341487 - 39341369
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattatt---caatgtatcttaaaagttaactgtctcttgtaaa 96  Q
    ||||||||| ||| |||||||||| |||||| ||||| |||||||||||||||||||||||||    ||||||||| |||||| || | |||||||||||    
T  39341487 ttttagatatattaaataatttatatatttgatttagattcttgactagatacatacattatttaataatgtatctaaaaagtcaattttctcttgtaaa 39341388  T
Q  97 taggaccagaggtagtatc 115  Q
    ||||||| |||| ||||||    
T  39341387 taggaccggagggagtatc 39341369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 44593313 - 44593210
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||||||| |||||||||| ||||||||||| ||| |||| |||||||||| |||||||||||||| | |||||| |||| | |||||||||||     
T  44593313 ttttagatacattaaataatttatgtatttggtttaagtttttgattagatacatatattattcaatgtatttaaaaagtcaactttttcttgtaaataa 44593214  T
Q  100 gacc 103  Q
    ||||    
T  44593213 gacc 44593210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 8825767 - 8825846
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagt 79  Q
    ||||||||| ||| |||||||||| ||||||||||| ||||||||||||||||||| ||||||||||| |||| ||||||    
T  8825767 ttttagatatattaaataatttatgtatttggtttaagttcttgactagatacatatattattcaatgcatctaaaaagt 8825846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 49 - 114
Target Start/End: Original strand, 8243767 - 8243832
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggaccagaggtagtat 114  Q
    ||||||| |||||||||||||||| |||||| || |||||||||||||||||||| ||||||||||    
T  8243767 atacataaattattcaatgtatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtat 8243832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 49 - 114
Target Start/End: Complemental strand, 10049731 - 10049666
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggaccagaggtagtat 114  Q
    ||||||| |||||||||||||||| |||||| || |||||||||||||||||||| ||||||||||    
T  10049731 atacataaattattcaatgtatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtat 10049666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 49 - 113
Target Start/End: Original strand, 9440213 - 9440277
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggaccagaggtagta 113  Q
    ||||||| |||||||||||||||| |||||| || |||||||||||||||||||| |||||||||    
T  9440213 atacataaattattcaatgtatctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 9440277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 49 - 112
Target Start/End: Original strand, 6086986 - 6087049
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggaccagaggtagt 112  Q
    ||||||| |||||||||||||||| |||||| || |||||||||||||||||||| ||||||||    
T  6086986 atacataaattattcaatgtatctaaaaagtaaattgtctcttgtaaataggaccggaggtagt 6087049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 55139209 - 55139307
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaata 98  Q
    |||||||||||||||||||||||| |||||| ||||  |||||||| | ||||||| |||||||||| ||||| ||||||| | ||| |||| ||||||    
T  55139209 ttttagatacattgaataatttatgtatttgttttaaattcttgaccaaatacataaattattcaatatatctaaaaagttgattgtttcttttaaata 55139307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 49 - 113
Target Start/End: Complemental strand, 26999084 - 26999020
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggaccagaggtagta 113  Q
    ||||||| |||||| ||||||||| |||||| || |||||||||||||||||||| |||||||||    
T  26999084 atacataaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 26999020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 49 - 116
Target Start/End: Complemental strand, 28945719 - 28945652
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggaccagaggtagtatca 116  Q
    ||||||| |||||| ||||||||| |||||| || |||||||||||||||||||| |||| |||||||    
T  28945719 atacataaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccggagggagtatca 28945652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 49 - 114
Target Start/End: Complemental strand, 14768161 - 14768096
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggaccagaggtagtat 114  Q
    ||||||| |||||| ||||||||| |||||| || |||||||||||||||||||| |||| |||||    
T  14768161 atacataaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccggagggagtat 14768096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 49 - 114
Target Start/End: Original strand, 51698199 - 51698264
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggaccagaggtagtat 114  Q
    ||||||| |||||| ||||||||| |||||| || |||||||||||||||||| |||||| |||||    
T  51698199 atacataaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggatcagagggagtat 51698264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 49 - 110
Target Start/End: Original strand, 52114109 - 52114170
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggaccagaggta 110  Q
    ||||||| |||||| ||||||||| |||||| || ||||||||||||||||||| |||||||    
T  52114109 atacataaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggactagaggta 52114170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 49 - 113
Target Start/End: Complemental strand, 379133 - 379069
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggaccagaggtagta 113  Q
    ||||||| |||||| ||||||||| |||| |||| |||||||||||||||||||| |||| ||||    
T  379133 atacataaattatttaatgtatctaaaaaattaattgtctcttgtaaataggaccggagggagta 379069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 49 - 108
Target Start/End: Complemental strand, 49123007 - 49122948
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggaccagagg 108  Q
    ||||||| |||||| ||||||||| |||||| || |||||||||||||||||||| ||||    
T  49123007 atacataaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccggagg 49122948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 15 - 72
Target Start/End: Complemental strand, 42841697 - 42841639
Alignment:
Q  15 aataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatct 72  Q
    |||||||||| ||||| |||||| ||||| |||||||| ||||||||||||||||||||    
T  42841697 aataatttatgtatttagtttagattcttaactagatatatacattattcaatgtatct 42841639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 22003908 - 22003811
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaat 97  Q
    |||||||||||||||||||||||| ||| | ||  ||  |||  |||| ||| ||| |||||||||||||||| |||| |||| ||||||||||||||    
T  22003908 ttttagatacattgaataatttatgtatctagtaaagaatctaaactaaatatataaattattcaatgtatctaaaaaattaattgtctcttgtaaat 22003811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 22011425 - 22011328
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaat 97  Q
    |||||||||||||||||||||||| ||| | ||  ||  |||  |||| ||| ||| |||||||||||||||| |||| |||| ||||||||||||||    
T  22011425 ttttagatacattgaataatttatgtatctagtaaagaatctaaactaaatatataaattattcaatgtatctaaaaaattaattgtctcttgtaaat 22011328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 49 - 114
Target Start/End: Original strand, 25846596 - 25846661
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggaccagaggtagtat 114  Q
    ||||||| |||||| ||||||| | |||||| || |||||||||||||||||||| || |||||||    
T  25846596 atacataaattatttaatgtatttaaaaagtaaattgtctcttgtaaataggaccggaagtagtat 25846661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 40141986 - 40141879
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||||||| |||||||||| |||||||||||  |||||||||| ||||||||     |||||||||| ||||||| |  | ||||||||||| ||    
T  40141986 ttttagatacattaaataatttatgtatttggtttaaattcttgactaaatacatac-----tcaatgtatc-taaaagtgatatttctcttgtaaacag 40141893  T
Q  100 gaccagaggtagta 113  Q
    |||| |||| ||||    
T  40141892 gacccgagggagta 40141879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 48593254 - 48593141
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    |||||||| ||||||||||||||| |||||||| ||  |||| |||  |||||||  |||||||||||||||| |||||| |  ||| |||| |  ||||    
T  48593254 ttttagattcattgaataatttatgtatttggtctatattctagacccgatacatcaattattcaatgtatctaaaaagtcacttgtttcttatgtatag 48593155  T
Q  100 gaccagaggtagta 113  Q
    ||||||||| ||||    
T  48593154 gaccagagggagta 48593141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 113
Target Start/End: Original strand, 9465156 - 9465220
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggaccagaggtagta 113  Q
    ||||||| ||||||  |||||||| |||||| || |||||||||||||||||||| |||| ||||    
T  9465156 atacataaattattttatgtatctaaaaagtaaattgtctcttgtaaataggaccggagggagta 9465220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 113
Target Start/End: Complemental strand, 29019798 - 29019734
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggaccagaggtagta 113  Q
    ||||||| |||||| ||||||||| ||| || || |||||||||||||||||||| |||| ||||    
T  29019798 atacataaattatttaatgtatctaaaatgtaaattgtctcttgtaaataggaccggagggagta 29019734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 101
Target Start/End: Complemental strand, 47449979 - 47449927
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatagga 101  Q
    ||||||| |||||| ||||||||| |||||| || ||||||||||||||||||    
T  47449979 atacataaattatttaatgtatctaaaaagtaaattgtctcttgtaaatagga 47449927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 49 - 108
Target Start/End: Original strand, 25113434 - 25113493
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggaccagagg 108  Q
    ||||||| |||||| ||||||||  |||||| || |||||||||||||||||||| ||||    
T  25113434 atacataaattatttaatgtatcgaaaaagtaaattgtctcttgtaaataggaccggagg 25113493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 8987841 - 8987759
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaa 82  Q
    ||||||||||||| |||||||||| |||||||||||  |||| ||| | |||||||  |||||||||| |||| |||| ||||    
T  8987841 ttttagatacattcaataatttatgtatttggtttaaattctagaccaaatacataagttattcaatgcatctaaaaaattaa 8987759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 102
Target Start/End: Original strand, 21653432 - 21653482
Alignment:
Q  52 catacattattcaatgtatcttaaaagttaactgtctcttgtaaataggac 102  Q
    |||| |||||| ||||||||| |||||| || |||||||||||||||||||    
T  21653432 cataaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggac 21653482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 28406503 - 28406617
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    |||||||| | |||||||||| || |||||||| ||  |||| |||  | |||||| ||||||||||| | || |||||| || ||| ||||||||||||    
T  28406503 ttttagattcgttgaataattaatgtatttggtctatattctagaccgggtacataaattattcaatgaacctaaaaagtcaattgtttcttgtaaatag 28406602  T
Q  100 gaccagaggtagtat 114  Q
    |||| |||| |||||    
T  28406603 gaccggagggagtat 28406617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 114
Target Start/End: Original strand, 42605907 - 42605977
Alignment:
Q  44 actagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggaccagaggtagtat 114  Q
    |||| ||||||| ||||||  |||||||| |||||| || |||||||||||| ||||||| |||| |||||    
T  42605907 actaaatacataaattattttatgtatctaaaaagtaaattgtctcttgtaagtaggaccggagggagtat 42605977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 49 - 102
Target Start/End: Complemental strand, 3484395 - 3484342
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggac 102  Q
    ||||||| | |||| ||||||||| |||| |||| |||||||||||||||||||    
T  3484395 atacataaactatttaatgtatctaaaaaattaattgtctcttgtaaataggac 3484342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 49 - 98
Target Start/End: Complemental strand, 9190091 - 9190042
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaata 98  Q
    ||||||| |||||| |||||||||||||||| ||  ||||||||||||||    
T  9190091 atacataaattatttaatgtatcttaaaagtaaatcgtctcttgtaaata 9190042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 16660394 - 16660334
Alignment:
Q  1 ttttagatacattgaataa--tttat-tatttggtttaggttcttgactagatacatacat 58  Q
    ||||||||||||| |||||  ||||| ||||||||||||||| ||||||| ||||||||||    
T  16660394 ttttagatacattaaataaaatttatgtatttggtttaggttgttgactaaatacatacat 16660334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 49 - 102
Target Start/End: Original strand, 40141959 - 40142012
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggac 102  Q
    ||||||| |||||| ||||||||| |||||| || ||| |||||||||||||||    
T  40141959 atacataaattatttaatgtatctaaaaagtaaattgtttcttgtaaataggac 40142012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 49 - 114
Target Start/End: Original strand, 40214985 - 40215050
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggaccagaggtagtat 114  Q
    ||||||| |||||| ||||||||| |||||| |  |||||||| ||||||||||| |||| |||||    
T  40214985 atacataaattatttaatgtatctaaaaagtaacttgtctcttataaataggaccggagggagtat 40215050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 49 - 113
Target Start/End: Original strand, 19202335 - 19202399
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggaccagaggtagta 113  Q
    ||||||| |||||| ||||||||| |||||| || ||| | |||||||||||||| |||| ||||    
T  19202335 atacataaattatttaatgtatctaaaaagtaaattgttttttgtaaataggaccggagggagta 19202399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 90; Significance: 1e-43; HSPs: 57)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 37699892 - 37699779
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||    
T  37699892 ttttagatacattgaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatctaaaaagtcaactgtctcttgtaaatag 37699793  T
Q  100 gaccagaggtagta 113  Q
    |||| |||| ||||    
T  37699792 gaccggagggagta 37699779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 25027730 - 25027844
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| |||||| |||||||||||||||||||    
T  25027730 ttttagatacattgaataatttatgtatttggtttaggttcttgactagatatatacattattcaatgtatctaaaaagtcaactgtctcttgtaaatag 25027829  T
Q  100 gaccagaggtagtat 114  Q
    |||| |||| |||||    
T  25027830 gaccggagggagtat 25027844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 29374206 - 29374320
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||| |||||| |||||||||||||||||||    
T  29374206 ttttagatacattgaataatttatgtatttggtttaggttcttgacgagatacatacattattcaatgtatctaaaaagtcaactgtctcttgtaaatag 29374305  T
Q  100 gaccagaggtagtat 114  Q
    |||| |||| |||||    
T  29374306 gaccggagggagtat 29374320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 13144916 - 13145030
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||| | |||||||||||||||||||    
T  13144916 ttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatctaaaaaatcaactgtctcttgtaaatag 13145015  T
Q  100 gaccagaggtagtat 114  Q
    |||| |||| |||||    
T  13145016 gaccggagggagtat 13145030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 7749954 - 7750057
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||||||| |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||| |||||| |||| ||||||||||||||    
T  7749954 ttttagatacattaaataatttatgtatttggtttagattcttgactagatacatacattattcaatgtatctaaaaagtcaactttctcttgtaaatag 7750053  T
Q  100 gacc 103  Q
    ||||    
T  7750054 gacc 7750057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 904078 - 903964
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||||||||| ||||| |||||| |||| ||||||||||||||    
T  904078 ttttagatacattaaataatttatgtatttggtttaggttcttgactagatacacacattattcaatatatctaaaaagtcaactttctcttgtaaatag 903979  T
Q  100 gaccagaggtagtat 114  Q
    |||| |||| |||||    
T  903978 gaccggagggagtat 903964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 41989600 - 41989702
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||| |||||| |||||||    
T  41989600 ttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatctaaaaagtcaactttctcttttaaatag 41989699  T
Q  100 gac 102  Q
    |||    
T  41989700 gac 41989702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 31803070 - 31802957
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||||||| |||||||||| ||||||||||||||| ||||||||||| |||||||||||||||||||| |||||| |||| ||||||||||||||    
T  31803070 ttttagatacattaaataatttatgtatttggtttaggttattgactagatatatacattattcaatgtatctaaaaagtcaactttctcttgtaaatag 31802971  T
Q  100 gaccagaggtagta 113  Q
    |||| |||| ||||    
T  31802970 gaccggagggagta 31802957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 1643380 - 1643494
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    |||||||||||||||| ||||||| |||||| ||||| ||||||||||||||||||||||||| ||||||||| |||||| ||||||||||| |||||||    
T  1643380 ttttagatacattgaaaaatttatgtatttgatttagattcttgactagatacatacattattgaatgtatctaaaaagtcaactgtctcttataaatag 1643479  T
Q  100 gaccagaggtagtat 114  Q
    |||| |||| |||||    
T  1643480 gaccggagggagtat 1643494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 26898227 - 26898341
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||| ||||||| |||||||||| ||||||||||||||||||||||| ||||||||||||||||||| |||| |||||| |||| ||||||||||||||    
T  26898227 ttttaaatacattaaataatttatgtatttggtttaggttcttgactaaatacatacattattcaatgcatctaaaaagtcaactttctcttgtaaatag 26898326  T
Q  100 gaccagaggtagtat 114  Q
    |||| |||| |||||    
T  26898327 gaccggagggagtat 26898341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 36417159 - 36417045
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||||||| |||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| | |||||| || | ||||||||||||||    
T  36417159 ttttagatacattaaataatttatgtatttggattaggttcttgactagatacatacattattcaatgtatttaaaaagtcaaatttctcttgtaaatag 36417060  T
Q  100 gaccagaggtagtat 114  Q
    |||| |||| |||||    
T  36417059 gaccggagggagtat 36417045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 2825896 - 2825997
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||||||| |||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| |||||| || | ||||||||||||||    
T  2825896 ttttagatacattaaataatttatgtatttggtttaggttcttaactagatacatacattattcaatgtatctaaaaagtcaattttctcttgtaaatag 2825995  T
Q  100 ga 101  Q
    ||    
T  2825996 ga 2825997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 21090488 - 21090380
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||| ||||||| |||||| ||| |||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| | ||||||||||||||    
T  21090488 ttttaaatacattaaataatgtatgtatttggtttagattcttgactagatacatacattattcaatgtatctaaaaagttaattttctcttgtaaatag 21090389  T
Q  100 gaccagagg 108  Q
    |||| ||||    
T  21090388 gaccggagg 21090380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 9601705 - 9601602
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||||||  |||||||||| |||||||||||| || |||||||||||||||||||||||||||||||| |||||| |||| ||||||||||||||    
T  9601705 ttttagatacatcaaataatttatgtatttggtttagatttttgactagatacatacattattcaatgtatctaaaaagtcaactttctcttgtaaatag 9601606  T
Q  100 gacc 103  Q
    ||||    
T  9601605 gacc 9601602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 7053684 - 7053797
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||||||| |||||||||| |||||| |||||| |||||||||||||||||||||||||||||||| | |||||| |||| ||||||||||||||    
T  7053684 ttttagatacattaaataatttatgtatttgatttaggctcttgactagatacatacattattcaatgtatttaaaaagtcaact-tctcttgtaaatag 7053782  T
Q  100 gaccagaggtagtat 114  Q
    |||| |||| |||||    
T  7053783 gaccggagggagtat 7053797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 18353320 - 18353218
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||||||| |||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| | |||| | |||| ||||||||||||||    
T  18353320 ttttagatacattaaataatttatgtatttggtttatgttcttgactagatacatacattattcaatgtatgtaaaaaatcaactttctcttgtaaatag 18353221  T
Q  100 gac 102  Q
    |||    
T  18353220 gac 18353218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 23411201 - 23411315
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| |||| | || | |||||||||||||     
T  23411201 ttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatatattattcaatgtatctaaaaaatcaattttctcttgtaaataa 23411300  T
Q  100 gaccagaggtagtat 114  Q
    |||| |||| |||||    
T  23411301 gaccggagggagtat 23411315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 6338427 - 6338326
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||||||| |||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| |||||| ||||  ||||| |||||||    
T  6338427 ttttagatacattaaataatttatgtatttggtttaggttcttgattagatacatacattattcaatgtatctaaaaagtcaacttcctcttataaatag 6338328  T
Q  100 ga 101  Q
    ||    
T  6338327 ga 6338326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 7945873 - 7945974
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||||||| |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||| |||||| | || ||||||||||| ||    
T  7945873 ttttagatacattaaataatttatatatttggtttagattcttgactagatacatacattattcaatgtatctaaaaagtgatctttctcttgtaaacag 7945972  T
Q  100 ga 101  Q
    ||    
T  7945973 ga 7945974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 21610413 - 21610312
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||| ||||||| |||||||||| ||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||||| | ||||||||||||    
T  21610413 ttttatatacattaaataatttatgtatttggtttaggttcttgactaaatatatacattattcaatgtatctaaaaagttaactttatcttgtaaatag 21610314  T
Q  100 ga 101  Q
    ||    
T  21610313 ga 21610312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 15569443 - 15569344
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||||||| |||||||||| ||||||||||| |||||||| |||||| |||||||||||||||||||| |||||| |||| ||||||||||||||    
T  15569443 ttttagatacattaaataatttatgtatttggtttatgttcttgattagatatatacattattcaatgtatctaaaaagtcaactttctcttgtaaatag 15569344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 41815221 - 41815324
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||| ||||||| |||||||||| ||||||||| ||||||||||||| |||| ||||||||||||||||||| |||||| |||| ||||||||||||||    
T  41815221 ttttaaatacattaaataatttatgtatttggttcaggttcttgactaaatacgtacattattcaatgtatctaaaaagtcaactttctcttgtaaatag 41815320  T
Q  100 gacc 103  Q
    ||||    
T  41815321 gacc 41815324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 20578767 - 20578653
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||| ||||||| |||||||||| ||||||||||||||| ||||||||||| ||| |||||||||||||||| |||||| |||| |||||| |||||||    
T  20578767 ttttatatacattaaataatttatgtatttggtttaggttattgactagatagatatattattcaatgtatctaaaaagtcaactttctcttataaatag 20578668  T
Q  100 gaccagaggtagtat 114  Q
     |||||||| |||||    
T  20578667 aaccagagggagtat 20578653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 36419097 - 36418983
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||||||  |||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||  |||| | |||| | ||||||||||||    
T  36419097 ttttagatacataaaataatttatgtatttagtttaggttcttgactagatacatacattattcaatgtatcaaaaaaatcaactttatcttgtaaatag 36418998  T
Q  100 gaccagaggtagtat 114  Q
    |||| |||| |||||    
T  36418997 gaccggagggagtat 36418983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 41046864 - 41046962
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaata 98  Q
    ||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||| |||||||||||||||| |||| | |||| |||||| ||||||    
T  41046864 ttttagatacattaaataatttatgtatttggtttaagttcttgactagatacatatattattcaatgtatctaaaaaatcaactttctcttataaata 41046962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 42311922 - 42311819
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||||||| |||||||||| ||||||||||| ||| ||||||| |||||||||||||||||||||| | |||||| || | | ||||||||||||    
T  42311922 ttttagatacattaaataatttatgtatttggtttaagtttttgactaaatacatacattattcaatgtatttaaaaagtcaattttttcttgtaaatag 42311823  T
Q  100 gacc 103  Q
    ||||    
T  42311822 gacc 42311819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 1108319 - 1108433
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||||||  |||||||||| ||||| ||||||||||||||||||||||||||||||||||||| |||| |||  | |||| | ||| ||||||||    
T  1108319 ttttagatacataaaataatttatgtatttagtttaggttcttgactagatacatacattattcaatgcatctaaaagatcaactttatctcgtaaatag 1108418  T
Q  100 gaccagaggtagtat 114  Q
    |||| |||| |||||    
T  1108419 gaccggagggagtat 1108433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 2959351 - 2959243
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||||||| |||||| ||| |||||| ||||  |||||||||||||| ||||||| |||||||||||| |||||| || | ||||||||||||||    
T  2959351 ttttagatacattaaataatatatgtatttgatttaaattcttgactagatatatacattcttcaatgtatctaaaaagtcaattttctcttgtaaatag 2959252  T
Q  100 gaccagagg 108  Q
    |||| ||||    
T  2959251 gaccggagg 2959243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 2967820 - 2967712
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||||||| |||||| ||| |||||| ||||  |||||||||||||| ||||||| |||||||||||| |||||| || | ||||||||||||||    
T  2967820 ttttagatacattaaataatatatgtatttgatttaaattcttgactagatatatacattcttcaatgtatctaaaaagtcaattttctcttgtaaatag 2967721  T
Q  100 gaccagagg 108  Q
    |||| ||||    
T  2967720 gaccggagg 2967712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 14338851 - 14338947
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaa 96  Q
    ||||||||| ||| |||||||||| |||||||||||  ||||||| |||||||||| |||||||||||||||| ||||||||| | |||||||||||    
T  14338851 ttttagataaattaaataatttatgtatttggtttaaattcttgaatagatacataaattattcaatgtatctaaaaagttaaatttctcttgtaaa 14338947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 6910748 - 6910851
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||||||| |||||||||| |||||| ||||| ||||||||||||| ||||||||||||||| ||||| |||||| |||| | | ||||||| ||    
T  6910748 ttttagatacattaaataatttatgtatttgatttagattcttgactagatgcatacattattcaatatatctaaaaagtcaactttgtattgtaaacag 6910847  T
Q  100 gacc 103  Q
    ||||    
T  6910848 gacc 6910851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 16089199 - 16089130
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgta 69  Q
    ||||||||| ||| |||||||||| |||||||||||||||| ||||||||||||||||||||||||||||    
T  16089199 ttttagatatattaaataatttatgtatttggtttaggttcatgactagatacatacattattcaatgta 16089130  T

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Target: chr5; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 49 - 114
Target Start/End: Complemental strand, 25027757 - 25027692
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggaccagaggtagtat 114  Q
    ||||||| |||||||||||||||| |||||| || |||||||||||||||||||| ||||||||||    
T  25027757 atacataaattattcaatgtatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtat 25027692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 49 - 115
Target Start/End: Original strand, 37699865 - 37699931
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggaccagaggtagtatc 115  Q
    ||||||| |||||||||||||||| |||||| || |||||||||||||||||||| || ||||||||    
T  37699865 atacataaattattcaatgtatctaaaaagtaaattgtctcttgtaaataggaccggatgtagtatc 37699931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 49 - 113
Target Start/End: Complemental strand, 13144943 - 13144879
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggaccagaggtagta 113  Q
    ||||||| |||||| ||||||||| |||||| || |||||||||||||||||||| |||||||||    
T  13144943 atacataaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 13144879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 49 - 113
Target Start/End: Complemental strand, 29374233 - 29374169
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggaccagaggtagta 113  Q
    ||||||| |||||||||||||||| |||||| || |||||||||||||||||| | |||||||||    
T  29374233 atacataaattattcaatgtatctaaaaagtaaattgtctcttgtaaataggatcggaggtagta 29374169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 38393867 - 38393785
Alignment:
Q  1 ttttagatacattgaataatttatta-tttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaa 82  Q
    ||||| ||| |||||||||||||| | |||| ||||| |||||||||| ||||||| |||||||||||||| |||||| ||||    
T  38393867 ttttaaatatattgaataatttatgaatttgatttagattcttgactatatacataaattattcaatgtattttaaaaattaa 38393785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 49 - 114
Target Start/End: Complemental strand, 1643407 - 1643342
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggaccagaggtagtat 114  Q
    ||||||| ||| |||||||||||| |||||| || ||||| |||||||||||||| ||||||||||    
T  1643407 atacataaatttttcaatgtatctaaaaagtaaattgtctattgtaaataggaccggaggtagtat 1643342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 49 - 114
Target Start/End: Original strand, 15569416 - 15569481
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggaccagaggtagtat 114  Q
    ||||||| |||||| ||||||||| |||||| || |||||||||||||||||||| |||| |||||    
T  15569416 atacataaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccggaggaagtat 15569481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 49 - 114
Target Start/End: Complemental strand, 41989627 - 41989562
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggaccagaggtagtat 114  Q
    ||||||| |||||| ||||||||| |||||| || |||||||||||||||||||| |||| |||||    
T  41989627 atacataaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccggaggaagtat 41989562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 49 - 113
Target Start/End: Complemental strand, 7053711 - 7053647
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggaccagaggtagta 113  Q
    ||||||| |||||| ||||||||| |||||| || |||||||||||||||||||| |||| ||||    
T  7053711 atacataaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccggagggagta 7053647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 49 - 114
Target Start/End: Original strand, 21610386 - 21610451
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggaccagaggtagtat 114  Q
    ||||||| |||||| ||||||| | ||||||||| ||| |||||||||||||||| |||| |||||    
T  21610386 atacataaattatttaatgtatataaaaagttaattgtttcttgtaaataggaccggagggagtat 21610451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 113
Target Start/End: Complemental strand, 7749981 - 7749917
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggaccagaggtagta 113  Q
    ||||||| |||||| ||||||||| |||| | || |||||||||||||||||||| |||| ||||    
T  7749981 atacataaattatttaatgtatctaaaaattaaattgtctcttgtaaataggaccggagggagta 7749917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 113
Target Start/End: Original strand, 9601678 - 9601742
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggaccagaggtagta 113  Q
    ||||||| ||||||  |||||||| |||||| || |||||||||||||||||||| |||| ||||    
T  9601678 atacataaattatttgatgtatctaaaaagtaaattgtctcttgtaaataggaccggagggagta 9601742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 113
Target Start/End: Original strand, 31803043 - 31803107
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggaccagaggtagta 113  Q
    ||||||| |||||| ||||||||| |||||| || ||| |||||||||||||||| |||| ||||    
T  31803043 atacataaattatttaatgtatctaaaaagtaaattgtttcttgtaaataggaccggagggagta 31803107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 113
Target Start/End: Original strand, 36417132 - 36417196
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggaccagaggtagta 113  Q
    ||||||| |||||| ||||||||| |||||| || ||| |||| |||||||||||||||| ||||    
T  36417132 atacataaattatttaatgtatctaaaaagtaaattgtttcttataaataggaccagagggagta 36417196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 44 - 103
Target Start/End: Complemental strand, 1108351 - 1108292
Alignment:
Q  44 actagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggacc 103  Q
    |||| ||||||| ||||||  |||||||| |||||| || ||||||||||||||||||||    
T  1108351 actaaatacataaattattttatgtatctaaaaagtaaattgtctcttgtaaataggacc 1108292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 49 - 116
Target Start/End: Original strand, 6338400 - 6338467
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggaccagaggtagtatca 116  Q
    ||||||| |||||| ||||||||| |||||| || ||||| |||||||||||||  |||| |||||||    
T  6338400 atacataaattatttaatgtatctaaaaagtaaattgtcttttgtaaataggactggagggagtatca 6338467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 49 - 108
Target Start/End: Complemental strand, 41046891 - 41046832
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggaccagagg 108  Q
    ||||||| |||||| ||||||||| ||||||  | |||||||||||||||||||| ||||    
T  41046891 atacataaattatttaatgtatctaaaaagtagattgtctcttgtaaataggaccggagg 41046832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 49 - 108
Target Start/End: Original strand, 42311895 - 42311954
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggaccagagg 108  Q
    ||||||| |||||| ||||||||| |||| | || |||||||||||||||||| ||||||    
T  42311895 atacataaattatttaatgtatctaaaaaataaattgtctcttgtaaataggatcagagg 42311954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 103
Target Start/End: Original strand, 2959324 - 2959378
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggacc 103  Q
    ||||||| |||||| ||||||||| |||||| || ||| ||||||||||||||||    
T  2959324 atacatatattatttaatgtatctaaaaagtaaattgtttcttgtaaataggacc 2959378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 103
Target Start/End: Original strand, 2967793 - 2967847
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggacc 103  Q
    ||||||| |||||| ||||||||| |||||| || ||| ||||||||||||||||    
T  2967793 atacatatattatttaatgtatctaaaaagtaaattgtttcttgtaaataggacc 2967847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 57 - 114
Target Start/End: Complemental strand, 7945892 - 7945835
Alignment:
Q  57 attattcaatgtatcttaaaagttaactgtctcttgtaaataggaccagaggtagtat 114  Q
    |||||| ||||||||| |||||| || ||| |||||||||||||||| |||| |||||    
T  7945892 attatttaatgtatctaaaaagtaaattgtttcttgtaaataggaccggagggagtat 7945835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 49 - 102
Target Start/End: Complemental strand, 26898254 - 26898201
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggac 102  Q
    ||||||| |||||| ||||||| | |||||| || |||||||||||||||||||    
T  26898254 atacataaattatttaatgtatttaaaaagtaaattgtctcttgtaaataggac 26898201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 113
Target Start/End: Complemental strand, 15968378 - 15968310
Alignment:
Q  45 ctagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggaccagaggtagta 113  Q
    ||||||||||  |||||| |||| |||| |||| |||||| | |||| ||||||||||| |||||||||    
T  15968378 ctagatacattaattattgaatgaatctaaaaaattaactttttcttataaataggaccggaggtagta 15968310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 49 - 101
Target Start/End: Original strand, 18353293 - 18353345
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatagga 101  Q
    ||||||| |||||| ||||||||| |||||| || ||| ||||||||||||||    
T  18353293 atacataaattatttaatgtatctaaaaagtaaattgtttcttgtaaatagga 18353345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 100
Target Start/End: Original strand, 36419065 - 36419121
Alignment:
Q  44 actagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatagg 100  Q
    |||| ||||||| ||||||  |||||||| |||||| || |||||||||||||||||    
T  36419065 actaaatacataaattattttatgtatctaaaaagtaaattgtctcttgtaaatagg 36419121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 90; Significance: 1e-43; HSPs: 58)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 16241379 - 16241266
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||    
T  16241379 ttttagatacattgaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatctaaaaagtcaactgtctcttgtaaatag 16241280  T
Q  100 gaccagaggtagta 113  Q
    |||| |||| ||||    
T  16241279 gaccggagggagta 16241266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 6761501 - 6761615
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||    
T  6761501 ttttagatacattgaataatttatgtatttggtttatgttcttgactagatacatacattattcaatgtatctaaaaagtcaactgtctcttgtaaatag 6761600  T
Q  100 gaccagaggtagtat 114  Q
    |||| |||| |||||    
T  6761601 gaccggagggagtat 6761615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 25892056 - 25891942
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||| |||||| ||||||||||| |||||||    
T  25892056 ttttagatacattgaataatttatgtatttggtttaggttcttgactagatacatacattattcaatttatctaaaaagtcaactgtctcttataaatag 25891957  T
Q  100 gaccagaggtagtat 114  Q
    || | |||| |||||    
T  25891956 gatcggagggagtat 25891942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 7765906 - 7765792
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||||||| ||||| |||| |||||| ||||||||||||||||||||||||||||||||||||||||| |||||| |||| ||||||||||||||    
T  7765906 ttttagatacattaaataaattatgtatttgatttaggttcttgactagatacatacattattcaatgtatctaaaaagtcaactttctcttgtaaatag 7765807  T
Q  100 gaccagaggtagtat 114  Q
    |||| |||| |||||    
T  7765806 gaccggagggagtat 7765792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 29866118 - 29866232
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| || |||||| |||| | ||||||||||||    
T  29866118 ttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtacctaaaaagtcaactttatcttgtaaatag 29866217  T
Q  100 gaccagaggtagtat 114  Q
    |||| |||| |||||    
T  29866218 gaccggagggagtat 29866232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 32197412 - 32197520
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||||||| |||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| |||| | |||| ||||||||||||||    
T  32197412 ttttagatacattaaataatttatgtatttggtttatgttcttgactagatacatacattattcaatgtatctaaaaaatcaactttctcttgtaaatag 32197511  T
Q  100 gaccagagg 108  Q
    |||| ||||    
T  32197512 gaccggagg 32197520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 1944646 - 1944531
Alignment:
Q  1 ttttagatacattgaataatttatta-tttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||||||| |||||| ||| | |||||||||||||||||||||||||||||||||||||||||||||| |||||| |||| ||| ||||||||||    
T  1944646 ttttagatacattaaataatatatgaatttggtttaggttcttgactagatacatacattattcaatgtatctaaaaagtcaactttcttttgtaaatag 1944547  T
Q  100 gaccagaggtagtatc 115  Q
    || |||||| ||||||    
T  1944546 gatcagagggagtatc 1944531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 2100053 - 2100160
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||| ||| || |||||||    
T  2100053 ttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatctaaaaagtcaactttcttttataaatag 2100152  T
Q  100 gaccagag 107  Q
    || |||||    
T  2100153 gatcagag 2100160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 18452605 - 18452707
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| ||| | |||||| |||||||||||||||||||    
T  18452605 ttttagatacattgaataatttatgtatttggtttaagttcttgactagatacatacattattcaatatat-taaaaagtcaactgtctcttgtaaatag 18452703  T
Q  100 gacc 103  Q
    ||||    
T  18452704 gacc 18452707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 32750454 - 32750340
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    |||||||||||||  ||||||||| |||||| ||||| ||||||||||||||||||||||||||||||||||| |||||| |||| ||||||||||||||    
T  32750454 ttttagatacattacataatttatgtatttgatttagattcttgactagatacatacattattcaatgtatctaaaaagtcaactttctcttgtaaatag 32750355  T
Q  100 gaccagaggtagtat 114  Q
    |||| |||| |||||    
T  32750354 gaccggagggagtat 32750340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 41260061 - 41260175
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    |||| |||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| | ||||||  ||| ||||||||||||||    
T  41260061 tttttgatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatttaaaaagtcgactttctcttgtaaatag 41260160  T
Q  100 gaccagaggtagtat 114  Q
    |||| |||| |||||    
T  41260161 gaccggaggaagtat 41260175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 42263582 - 42263468
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| |||| | |||| |||||| |||||||    
T  42263582 ttttagatacattaaataatttatgtatttggtttaggttcttgactaaatacatacattattcaatgtatctaaaaaatcaactttctcttataaatag 42263483  T
Q  100 gaccagaggtagtat 114  Q
    |||| |||| |||||    
T  42263482 gaccggagggagtat 42263468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 43658037 - 43657939
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaata 98  Q
    ||||||||||||| |||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| |||||| |||| |||||||||||||    
T  43658037 ttttagatacattaaataatttatgtatttggtttaggtttttgactagatacatacattattcaatgtatctaaaaagtcaactttctcttgtaaata 43657939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 11363110 - 11363012
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaata 98  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||||||| ||||||||||||||| |||| |||||| |||| |||||||||||||    
T  11363110 ttttagatacattaaataatttatgtatttggtttaggttcttgactagatagatacattattcaatgcatctaaaaagtcaactttctcttgtaaata 11363012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 13775747 - 13775861
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||| ||| |||||||||| ||||||||||||||| |||||||||||||||||||||| ||||||||| |||||| |||| |||||| |||||||    
T  13775747 ttttagatatattaaataatttatgtatttggtttaggtttttgactagatacatacattatttaatgtatctaaaaagtcaactttctcttataaatag 13775846  T
Q  100 gaccagaggtagtat 114  Q
    |||| |||| |||||    
T  13775847 gaccggagggagtat 13775861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 20427037 - 20427150
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||| ||| |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| |||||| || | |||||| ||||||     
T  20427037 ttttagatagattaaataatttatgtatttgatttaggttcttgactagatacatacattattcaatgtatctaaaaagtcaattttctcttataaataa 20427136  T
Q  100 gaccagaggtagta 113  Q
    ||||||||| ||||    
T  20427137 gaccagagggagta 20427150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 40430778 - 40430677
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| |||||| || | |||||| |||||||    
T  40430778 ttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattgaatgtatctaaaaagtcaattttctcttataaatag 40430679  T
Q  100 ga 101  Q
    ||    
T  40430678 ga 40430677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 32880943 - 32881057
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||| ||||||| |||||||||| ||||||||||||||||||||||||||||||| |||||||||| ||||| |||||| |||| | ||||||||||||    
T  32880943 ttttatatacattaaataatttatgtatttggtttaggttcttgactagatacatatattattcaatatatctaaaaagtcaactttatcttgtaaatag 32881042  T
Q  100 gaccagaggtagtat 114  Q
     | |||||| |||||    
T  32881043 aatcagagggagtat 32881057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 44737394 - 44737281
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    |||||||||||||||||||||||| ||||||||| || ||||| ||||||||||||||||||||||||||||| |||||| || | |||||||||||||     
T  44737394 ttttagatacattgaataatttatgtatttggtt-agattcttaactagatacatacattattcaatgtatctaaaaagtcaattttctcttgtaaataa 44737296  T
Q  100 gaccagaggtagtat 114  Q
    |||| |||| |||||    
T  44737295 gaccggagggagtat 44737281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 38598492 - 38598605
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||| ||| ||| |||||||||| ||||||||||||||||||||| ||||||||| |||||||||||||||| |||||| |||| ||| ||||||||||    
T  38598492 ttttatatatattaaataatttatgtatttggtttaggttcttgaccagatacatatattattcaatgtatctaaaaagtaaactttcttttgtaaatag 38598591  T
Q  100 gaccagaggtagta 113  Q
    |||| |||| ||||    
T  38598592 gaccggaggaagta 38598605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 4740746 - 4740849
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||| ||| ||| |||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||| | ||||||||||| |||||||||||||     
T  4740746 ttttatatatattaaataatttatatatttggtataggttcttgattagatacatacattattcaatgtatttaaaaagttaactttctcttgtaaataa 4740845  T
Q  100 gacc 103  Q
    ||||    
T  4740846 gacc 4740849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 5 - 103
Target Start/End: Complemental strand, 11711432 - 11711333
Alignment:
Q  5 agatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggacc 103  Q
    ||||||||| |||||||||| ||||||  |||||||||||||||||||||||||||||||||||||||| |||||| || | ||| | ||||||||||||    
T  11711432 agatacattaaataatttatgtatttgacttaggttcttgactagatacatacattattcaatgtatctaaaaagtcaattttctttcgtaaataggacc 11711333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 42341654 - 42341757
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||| ||||||| |||||||||| |||||||||||| ||||||| ||||||||||||||||||||||||| | |||| | || | ||||||||||||||    
T  42341654 ttttaaatacattaaataatttatgtatttggtttagattcttgattagatacatacattattcaatgtatttaaaaaatcaattttctcttgtaaatag 42341753  T
Q  100 gacc 103  Q
    ||||    
T  42341754 gacc 42341757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 45065692 - 45065590
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||||||| |||||||||| |||||  ||||| |||| |||||||||||||||||||||||||||||| |||||| |||| ||| || |||||||    
T  45065692 ttttagatacattaaataatttatgtatttaatttagattctagactagatacatacattattcaatgtatctaaaaagtcaactttcttttataaatag 45065593  T
Q  100 gac 102  Q
    |||    
T  45065592 gac 45065590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 35 - 113
Target Start/End: Original strand, 20360515 - 20360593
Alignment:
Q  35 aggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggaccagaggtagta 113  Q
    |||||||||||||||||||||||||||||||||||||| |||||| |||| |||||| ||||||| ||| |||| ||||    
T  20360515 aggttcttgactagatacatacattattcaatgtatctaaaaagtcaactttctcttataaatagaaccggagggagta 20360593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 30864787 - 30864717
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtat 70  Q
    ||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||| ||||||||||||||    
T  30864787 ttttagatacattaaataatttatgtatttggtttaagttcttgactagatacatatattattcaatgtat 30864717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 3264958 - 3265031
Alignment:
Q  1 ttttagatacattgaataatttattatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaa 77  Q
    ||||||||||||| ||||||||||   |||||||| ||||||||||| |||||||||||||||||||||||| ||||    
T  3264958 ttttagatacattaaataatttat---ttggtttaagttcttgactaaatacatacattattcaatgtatctaaaaa 3265031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 22857916 - 22857822
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgta 94  Q
    ||||||||||| |||||||||||| |||||||||||| |||| ||  ||||||||| |||||||||||||||| |||||| || ||| |||||||    
T  22857916 ttttagatacaatgaataatttatgtatttggtttagattctagatcagatacataaattattcaatgtatctaaaaagtcaattgtttcttgta 22857822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 49 - 114
Target Start/End: Complemental strand, 6761528 - 6761463
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggaccagaggtagtat 114  Q
    ||||||| |||||||||||||||| |||||| || |||||||||||||||||||| ||||||||||    
T  6761528 atacataaattattcaatgtatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtat 6761463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 49 - 113
Target Start/End: Original strand, 16241352 - 16241416
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggaccagaggtagta 113  Q
    ||||||| |||||||||||||||| |||||| || |||||||||||||||||||| |||||||||    
T  16241352 atacataaattattcaatgtatctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 16241416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 49 - 113
Target Start/End: Original strand, 25892029 - 25892093
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggaccagaggtagta 113  Q
    ||||||| |||||||||||||||| |||||| || |||||||||||||||||||| |||||||||    
T  25892029 atacataaattattcaatgtatctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 25892093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 49 - 113
Target Start/End: Original strand, 44737367 - 44737431
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggaccagaggtagta 113  Q
    ||||||| |||||||||||||||| |||||| || |||||||||||||||||||| |||||||||    
T  44737367 atacataaattattcaatgtatctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 44737431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 204 - 250
Target Start/End: Original strand, 15930847 - 15930893
Alignment:
Q  204 ttcaaattcaaacagccaaatactttgaagttcaaatagtggaattt 250  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||    
T  15930847 ttcaaattcaaacagccaaatactttgaaattcaaatagtggaattt 15930893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 49 - 114
Target Start/End: Original strand, 11711409 - 11711474
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggaccagaggtagtat 114  Q
    ||||||| |||||| |||||||||||||||| || |||||||||||||||||||| |||| |||||    
T  11711409 atacataaattatttaatgtatcttaaaagtaaattgtctcttgtaaataggaccggagggagtat 11711474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 49 - 114
Target Start/End: Complemental strand, 18452632 - 18452567
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggaccagaggtagtat 114  Q
    ||||||| |||||||||||||||| |||||| || |||||||||||||||||||  ||||||||||    
T  18452632 atacataaattattcaatgtatctaaaaagtaaattgtctcttgtaaataggactggaggtagtat 18452567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 41205602 - 41205499
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||| ||| |||||||||| |||||||||||  || || |||||||||||| |||||||||| ||||| |||| | |||| |||||| ||||||     
T  41205602 ttttagatatattaaataatttatgtatttggtttatattttttactagatacataaattattcaatatatctaaaaaatcaactttctcttataaataa 41205503  T
Q  100 gacc 103  Q
    ||||    
T  41205502 gacc 41205499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 49 - 114
Target Start/End: Complemental strand, 29866145 - 29866080
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggaccagaggtagtat 114  Q
    ||||||| |||||| ||||||||| |||||| || |||||||||||||||||||| |||| |||||    
T  29866145 atacataaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccggagggagtat 29866080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 101
Target Start/End: Original strand, 33913188 - 33913288
Alignment:
Q  2 tttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatagg 100  Q
    |||||||| ||| |||||||||| |||||||||||| |||| |||||||||||||| ||||| ||| ||| | |||| | |||| | | |||||||||||    
T  33913188 tttagatatattaaataatttatgtatttggtttagattctcgactagatacatacgttatttaatatatttaaaaaatcaactttatattgtaaatagg 33913287  T
Q  101 a 101  Q
    |    
T  33913288 a 33913288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 39377872 - 39377970
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||||||  |||||||||| |||||||||||     ||||| | ||||||| ||||||  |||||||| |||||| || ||||||||||||||||    
T  39377872 ttttagatacatcaaataatttatgtatttggttta-----ttgaccaaatacataaattatttgatgtatctaaaaagtaaattgtctcttgtaaatag 39377966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 57 - 115
Target Start/End: Original strand, 12486085 - 12486143
Alignment:
Q  57 attattcaatgtatcttaaaagttaactgtctcttgtaaataggaccagaggtagtatc 115  Q
    ||||||||||| |||| |||||| || ||| ||||||||||||||||||||| ||||||    
T  12486085 attattcaatgaatctaaaaagtcaattgtttcttgtaaataggaccagagggagtatc 12486143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 49 - 114
Target Start/End: Complemental strand, 39377899 - 39377834
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggaccagaggtagtat 114  Q
    ||||||| ||||||  |||||||| |||||| || |||||||||||||||||||| |||| |||||    
T  39377899 atacataaattatttgatgtatctaaaaagtaaattgtctcttgtaaataggaccggagggagtat 39377834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 113
Target Start/End: Complemental strand, 20427064 - 20427000
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggaccagaggtagta 113  Q
    ||||||| |||||| ||| ||||| |||||| || |||||||||||||||||||| |||| ||||    
T  20427064 atacataaattatttaatctatctaaaaagtaaattgtctcttgtaaataggaccggagggagta 20427000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 113
Target Start/End: Complemental strand, 41260088 - 41260024
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggaccagaggtagta 113  Q
    ||||||| |||||| ||||||||  |||||| || |||||||||||||||||||| |||| ||||    
T  41260088 atacataaattatttaatgtatcaaaaaagtaaattgtctcttgtaaataggaccggagggagta 41260024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 49 - 108
Target Start/End: Original strand, 7765879 - 7765938
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggaccagagg 108  Q
    |||||||  ||||| ||||||||| |||||| || |||||||| ||||||||||||||||    
T  7765879 atacataatttatttaatgtatctaaaaagtaaattgtctcttataaataggaccagagg 7765938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 45065616 - 45065715
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    |||||||||||||||||||| ||| ||| | || |||  |||  | || ||||||| |||||| ||||||||| |||||| || ||||||||||||||||    
T  45065616 ttttagatacattgaataatgtatgtatctagtctagaatctaaattaaatacataaattatttaatgtatctaaaaagtaaattgtctcttgtaaatag 45065715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 99
Target Start/End: Original strand, 11363083 - 11363133
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||| |||||| ||||||||| |||||| || ||||||||||||||||    
T  11363083 atacataaattatttaatgtatctaaaaagtaaattgtctcttgtaaatag 11363133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 115
Target Start/End: Complemental strand, 20555345 - 20555255
Alignment:
Q  25 tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggaccagaggtagtatc 115  Q
    |||||||| ||  |||| ||| ||||||||  |||||||||||||||| |||| |||| | | |||| ||||||||||| ||| |||||||    
T  20555345 tatttggtctatattctagacaagatacatcaattattcaatgtatctaaaaaattaattttttcttataaataggaccggagatagtatc 20555255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 103
Target Start/End: Original strand, 40430751 - 40430805
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggacc 103  Q
    ||||||| |||||| ||||||||| |||||| || |||||||| |||||||||||    
T  40430751 atacataaattatttaatgtatctaaaaagtaaattgtctcttataaataggacc 40430805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 49 - 114
Target Start/End: Complemental strand, 13775774 - 13775709
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggaccagaggtagtat 114  Q
    ||||||| |||||| ||| ||||| |||||| || | |||||||||||||||||| |||| |||||    
T  13775774 atacataaattatttaatatatctaaaaagtaaattatctcttgtaaataggaccggagggagtat 13775709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 49 - 114
Target Start/End: Complemental strand, 27182138 - 27182073
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggaccagaggtagtat 114  Q
    ||||||| |||||||||||||||| |||| | || ||| ||||||||||| || |||||| |||||    
T  27182138 atacataaattattcaatgtatctgaaaaatcaattgtttcttgtaaataagatcagagggagtat 27182073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 49 - 114
Target Start/End: Complemental strand, 27831680 - 27831615
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggaccagaggtagtat 114  Q
    ||||||| |||||||||||||||| |||| | || ||| ||||||||||| || |||||| |||||    
T  27831680 atacataaattattcaatgtatctgaaaaatcaattgtttcttgtaaataagatcagagggagtat 27831615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 49 - 98
Target Start/End: Original strand, 30864760 - 30864809
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaata 98  Q
    ||||||| |||||| ||||||||| |||||| || |||||||||||||||    
T  30864760 atacataaattatttaatgtatctaaaaagtaaattgtctcttgtaaata 30864809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 49 - 114
Target Start/End: Original strand, 41205575 - 41205640
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggaccagaggtagtat 114  Q
    ||||||| |||||| ||| ||||| |||| |||| | |||||| |||||||||||||||| |||||    
T  41205575 atacataaattatttaatatatctaaaaaattaattatctcttataaataggaccagaggaagtat 41205640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 49 - 102
Target Start/End: Original strand, 42263555 - 42263608
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggac 102  Q
    ||||||| |||||| ||||||||| |||||| || ||| |||||||||||||||    
T  42263555 atacataaattatttaatgtatctaaaaagtaaattgtttcttgtaaataggac 42263608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 41 - 114
Target Start/End: Complemental strand, 42470982 - 42470909
Alignment:
Q  41 ttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggaccagaggtagtat 114  Q
    ||||||||||| ||||||||||||||||||||  ||| | |||| ||| || ||||||||| | |||| |||||    
T  42470982 ttgactagatatatacattattcaatgtatctacaaaatcaactttcttttataaataggatccgagggagtat 42470909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 49 - 102
Target Start/End: Original strand, 43658010 - 43658063
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggac 102  Q
    ||||||| |||||| ||||||||| |||||| || | |||||||||||||||||    
T  43658010 atacataaattatttaatgtatctaaaaagtaaattatctcttgtaaataggac 43658063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 57 - 114
Target Start/End: Complemental strand, 45034453 - 45034396
Alignment:
Q  57 attattcaatgtatcttaaaagttaactgtctcttgtaaataggaccagaggtagtat 114  Q
    |||||| |||| |||| ||||||||||| | |||| ||||||||||| ||||||||||    
T  45034453 attattgaatgaatctaaaaagttaactttttcttataaataggaccggaggtagtat 45034396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 49 - 101
Target Start/End: Complemental strand, 32880970 - 32880918
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatagga 101  Q
    ||||||| |||||| ||||||| | |||||| || ||||||||||||||||||    
T  32880970 atacataaattatttaatgtatataaaaagtaaattgtctcttgtaaatagga 32880918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 88; Significance: 2e-42; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 14281626 - 14281729
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||    
T  14281626 ttttagatacattgaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatctaaaaagtcaactgtctcttgtaaatag 14281725  T
Q  100 gacc 103  Q
    ||||    
T  14281726 gacc 14281729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 9302031 - 9301918
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  9302031 ttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattatttaatgtatctaaaaagttaactgtctcttgtaaatag 9301932  T
Q  100 gaccagaggtagta 113  Q
    |||| |||| ||||    
T  9301931 gaccggagggagta 9301918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 2352345 - 2352459
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||    
T  2352345 ttttagatatattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatctaaaaagtcaactgtctcttgtaaatag 2352444  T
Q  100 gaccagaggtagtat 114  Q
    |||| |||| |||||    
T  2352445 gaccggagggagtat 2352459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 23398116 - 23398229
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| || ||||| ||||||||||    
T  23398116 ttttagatacattgaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatctaaaaagtcaattgtctattgtaaatag 23398215  T
Q  100 gaccagaggtagta 113  Q
    |||| |||| ||||    
T  23398216 gaccggagggagta 23398229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 38830519 - 38830632
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||| | |||||| |||||||||||||||||||    
T  38830519 ttttagatacattgaataatttatgtatttggtttaggttcttgactagatacatatattattcaatgtatttaaaaagtcaactgtctcttgtaaatag 38830618  T
Q  100 gaccagaggtagta 113  Q
    |||| |||| ||||    
T  38830619 gaccggagggagta 38830632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 2961216 - 2961102
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||||||| |||||||||| |||||||||||||||| ||||||||||||||||||||| ||||||||| |||||| |||| ||||||||||||||    
T  2961216 ttttagatacattaaataatttatgtatttggtttaggttcatgactagatacatacattattgaatgtatctaaaaagtcaactttctcttgtaaatag 2961117  T
Q  100 gaccagaggtagtat 114  Q
    |||| |||| |||||    
T  2961116 gaccggagggagtat 2961102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 10380502 - 10380389
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||||||| |||||||||| |||||||||||||||| ||||||||||||||||||||| ||||||||| |||||| || | ||||||||||||||    
T  10380502 ttttagatacattaaataatttatgtatttggtttaggttcatgactagatacatacattattgaatgtatctaaaaagtcaattttctcttgtaaatag 10380403  T
Q  100 gaccagaggtagta 113  Q
    |||| |||| ||||    
T  10380402 gaccggaggaagta 10380389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 26545033 - 26545146
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    |||||||| |||| |||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| |||||| |||| |||||||||||||     
T  26545033 ttttagattcattaaataatttatgtatttggtttaagttcttgactagatacatacattattcaatgtatctaaaaagtcaactttctcttgtaaataa 26545132  T
Q  100 gaccagaggtagta 113  Q
    |||| |||| ||||    
T  26545133 gaccggaggaagta 26545146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 15289809 - 15289912
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||||||| |||||||||| ||||||||||||||| |||||||| ||||||||||||||||||||||| |||||| |||| |||||||||||||     
T  15289809 ttttagatacattaaataatttatatatttggtttaggttattgactaggtacatacattattcaatgtatctaaaaagtcaactttctcttgtaaataa 15289908  T
Q  100 gacc 103  Q
    ||||    
T  15289909 gacc 15289912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 10065367 - 10065253
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||||||| |||||||||| |||||| |||||||||||||| |||||||||||||||||||||||||| |||| | || | ||||||||||||||    
T  10065367 ttttagatacattaaataatttatgtatttgatttaggttcttgacgagatacatacattattcaatgtatctaaaaaatcaattttctcttgtaaatag 10065268  T
Q  100 gaccagaggtagtat 114  Q
    |||| |||| |||||    
T  10065267 gaccggagggagtat 10065253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 26550399 - 26550285
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||| ||||| |||||||||| |||||| ||||||||||| ||||||||||||||||||||||||||||| |||||| |||| ||||||||||||||    
T  26550399 ttttagaaacattaaataatttatgtatttgctttaggttcttaactagatacatacattattcaatgtatctaaaaagtcaactttctcttgtaaatag 26550300  T
Q  100 gaccagaggtagtat 114  Q
    || | |||| |||||    
T  26550299 gatcggaggaagtat 26550285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 29312475 - 29312589
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||||||| |||||||||| |||||| ||||||||||||||||||||| ||||||||||||||||| | |||||| |||| ||| ||||||||||    
T  29312475 ttttagatacattaaataatttatgtatttgatttaggttcttgactagatacgtacattattcaatgtatttaaaaagtcaactttctgttgtaaatag 29312574  T
Q  100 gaccagaggtagtat 114  Q
    |||| |||| |||||    
T  29312575 gaccggaggaagtat 29312589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 28989308 - 28989421
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||||||| |||||||||| |||||||||||| ||||||||||||||| ||||||||||||||||||| | |||| |||| |||||||||||||     
T  28989308 ttttagatacattaaataatttatgtatttggtttagattcttgactagatacgtacattattcaatgtatctaataagtcaactttctcttgtaaataa 28989407  T
Q  100 gaccagaggtagta 113  Q
    |||| |||| ||||    
T  28989408 gaccggagggagta 28989421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 1674084 - 1673981
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||| ||||||| |||||| |||||||||  ||||| |||| ||||||||||||||    
T  1674084 ttttagatacattaaataatttatgtatttggtttaggttcttgactaaatacatatattatttaatgtatctagaaagtcaactttctcttgtaaatag 1673985  T
Q  100 gacc 103  Q
    ||||    
T  1673984 gacc 1673981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 28359183 - 28359080
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||||||| |||||||||| |||||||||| |||||||||||||||||||| |||||||||||||||| |||| | |||| |||||| |||||||    
T  28359183 ttttagatacattaaataatttatgtatttggttttggttcttgactagatacatatattattcaatgtatctaaaaaatcaactttctcttataaatag 28359084  T
Q  100 gacc 103  Q
    ||||    
T  28359083 gacc 28359080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 33325369 - 33325472
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||||||| |||||||||| ||| |||||||| || |||||||||||||||||||||||||||||||| |||||| |||| | ||||||||||||    
T  33325369 ttttagatacattaaataatttatgtatctggtttagatttttgactagatacatacattattcaatgtatctaaaaagtcaactttttcttgtaaatag 33325468  T
Q  100 gacc 103  Q
    ||||    
T  33325469 gacc 33325472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 9548708 - 9548822
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||||||| |||||||||| |||||| ||||||||||||| |||||||| ||||| |||||||||||| |||||| || | ||||||||||||||    
T  9548708 ttttagatacattaaataatttatgtatttgatttaggttcttgattagatacacacattcttcaatgtatctaaaaagtcaattttctcttgtaaatag 9548807  T
Q  100 gaccagaggtagtat 114  Q
    |||| |||| |||||    
T  9548808 gaccggagggagtat 9548822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 7796202 - 7796089
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||||||| |||||||||| |||||||||||| |||||||||| |||||||||||||||||||||||| |||||   | | ||||||||||||||    
T  7796202 ttttagatacattaaataatttatgtatttggtttagattcttgactaaatacatacattattcaatgtatctaaaaagactattttctcttgtaaatag 7796103  T
Q  100 gaccagaggtagta 113  Q
    |||| |||| ||||    
T  7796102 gaccggagggagta 7796089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 40161285 - 40161182
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||||||| |||||||||| ||||||||||||||| |||||| ||||||||||||||||||||||| | |||||| || | |||||||||||||     
T  40161285 ttttagatacattaaataatttatgtatttggtttaggtttttgactggatacatacattattcaatgtatttaaaaagtcaattttctcttgtaaatat 40161186  T
Q  100 gacc 103  Q
    ||||    
T  40161185 gacc 40161182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 6784695 - 6784798
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||||||| |||||||||| |||||| || |||||||||| ||||||||||||||||||||||||||| |||| | |||| ||| || |||||||    
T  6784695 ttttagatacattaaataatttatatatttgattcaggttcttgattagatacatacattattcaatgtatctaaaaaatcaactttctattataaatag 6784794  T
Q  100 gacc 103  Q
    ||||    
T  6784795 gacc 6784798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 30264886 - 30264772
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||| ||| |||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||  | || | |||| ||||| ||||||||    
T  30264886 ttttagatatattaaataatttatatatttggtttaggttcttgactagatacatatattattcaatgtatccaacaaatcaactttctctcgtaaatag 30264787  T
Q  100 gaccagaggtagtat 114  Q
    || | |||| |||||    
T  30264786 gatcggagggagtat 30264772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 45536275 - 45536177
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaata 98  Q
    ||||||||||||  |||||||||| |||||||||||||||||||||| |||| |||||||||| ||||||||| |||||| || | |||||||||||||    
T  45536275 ttttagatacatcaaataatttatgtatttggtttaggttcttgacttgataaatacattattgaatgtatctaaaaagtcaattttctcttgtaaata 45536177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 24595030 - 24594947
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaact 84  Q
    ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| |||||||| |||| |||||| ||||    
T  24595030 ttttagatacattaaataatttatatatttggtttaggttcttgactagatacatacataattcaatg-atctaaaaagtcaact 24594947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 49 - 114
Target Start/End: Complemental strand, 14281653 - 14281588
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggaccagaggtagtat 114  Q
    ||||||| |||||||||||||||| |||||| || |||||||||||||||||||| ||||||||||    
T  14281653 atacataaattattcaatgtatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtat 14281588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 49 - 114
Target Start/End: Complemental strand, 38830546 - 38830481
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggaccagaggtagtat 114  Q
    ||||||| |||||||||||||||| |||||| || |||||||||||||||||||| ||||||||||    
T  38830546 atacataaattattcaatgtatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtat 38830481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 26733821 - 26733924
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||||||| |||||| ||| |||||||||||  |||||||||||||||||| |||||| | | |||||  ||||| |||| |||||| |||||||    
T  26733821 ttttagatacattaaataatctatgtatttggtttatattcttgactagatacataaattatttattttatctataaagtcaactttctcttataaatag 26733920  T
Q  100 gacc 103  Q
    ||||    
T  26733921 gacc 26733924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 34718927 - 34719033
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||||||| |||||||||| |||||||||||| || |||||||||||| |||||||       ||||| ||||||||||| ||| ||||||||||    
T  34718927 ttttagatacattaaataatttatgtatttggtttagatttttgactagatacgtacatta-------tatctaaaaagttaactttcttttgtaaatag 34719019  T
Q  100 gaccagaggtagta 113  Q
    |||| |||| ||||    
T  34719020 gaccggagggagta 34719033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 49 - 114
Target Start/End: Original strand, 2961189 - 2961254
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggaccagaggtagtat 114  Q
    ||||||| |||||| ||||||||| |||||| || ||||||||||||||||||||||||| |||||    
T  2961189 atacataaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtat 2961254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 49 - 114
Target Start/End: Original strand, 10380475 - 10380540
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggaccagaggtagtat 114  Q
    ||||||| |||||| ||||||||| |||||| || ||||||||||||||||||||||||| |||||    
T  10380475 atacataaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtat 10380540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 49 - 114
Target Start/End: Complemental strand, 23398143 - 23398078
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggaccagaggtagtat 114  Q
    ||||||| |||||||||||||||| |||||| |  |||||||||||||||||||| ||||||||||    
T  23398143 atacataaattattcaatgtatctaaaaagtaagttgtctcttgtaaataggaccggaggtagtat 23398078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 49 - 114
Target Start/End: Complemental strand, 2352372 - 2352307
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggaccagaggtagtat 114  Q
    ||||||| |||||| ||| ||||| |||||| || |||||||||||||||||||| ||||||||||    
T  2352372 atacataaattatttaatatatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtat 2352307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 49 - 114
Target Start/End: Original strand, 9302004 - 9302069
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggaccagaggtagtat 114  Q
    ||||||| |||||| ||||||||| |||||| || |||||||| ||||||||||| ||||||||||    
T  9302004 atacataaattatttaatgtatctaaaaagtaaattgtctcttataaataggaccggaggtagtat 9302069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 57 - 113
Target Start/End: Original strand, 24595011 - 24595067
Alignment:
Q  57 attattcaatgtatcttaaaagttaactgtctcttgtaaataggaccagaggtagta 113  Q
    |||||| ||||||||| |||||| || |||||||||||||||||| |||||||||||    
T  24595011 attatttaatgtatctaaaaagtaaattgtctcttgtaaataggatcagaggtagta 24595067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 49 - 113
Target Start/End: Complemental strand, 29312502 - 29312438
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggaccagaggtagta 113  Q
    ||||||| |||||| ||||||||| |||||| || |||||||||||||||||||| |||| ||||    
T  29312502 atacataaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccggaggaagta 29312438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 49 - 103
Target Start/End: Complemental strand, 26733848 - 26733794
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggacc 103  Q
    ||||||| |||||| ||||||||| ||||||||| ||| ||||||||||||||||    
T  26733848 atacatagattatttaatgtatctaaaaagttaattgtttcttgtaaataggacc 26733794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 49 - 114
Target Start/End: Complemental strand, 9548735 - 9548670
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggaccagaggtagtat 114  Q
    ||||||| |||||| ||||||||| |||||| || ||| |||||||||||||||| |||| |||||    
T  9548735 atacataaattatttaatgtatctaaaaagtaaattgtttcttgtaaataggaccggaggaagtat 9548670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 49 - 114
Target Start/End: Complemental strand, 34718954 - 34718889
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggaccagaggtagtat 114  Q
    ||||||| |||||| ||||||||| |||| | || |||||||||||||||||||| |||| |||||    
T  34718954 atacataaattatttaatgtatctaaaaattaaattgtctcttgtaaataggaccggagggagtat 34718889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 49 - 114
Target Start/End: Original strand, 46320234 - 46320299
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggaccagaggtagtat 114  Q
    ||||||| ||||||  |||||||| |||||| || |||||||||||||||||| |||||| |||||    
T  46320234 atacataaattatttgatgtatctaaaaagtaaattgtctcttgtaaataggaacagagggagtat 46320299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 57 - 117
Target Start/End: Original strand, 43929438 - 43929498
Alignment:
Q  57 attattcaatgtatcttaaaagttaactgtctcttgtaaataggaccagaggtagtatcat 117  Q
    |||||| |||| |||| ||||||||||| | |||| ||||||||||| |||||||||||||    
T  43929438 attattgaatgaatctaaaaagttaactttttcttataaataggaccggaggtagtatcat 43929498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 23537433 - 23537386
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgacta 47  Q
    ||||||||| ||| |||||||||| |||||||||||||||||||||||    
T  23537433 ttttagataaattaaataatttatgtatttggtttaggttcttgacta 23537386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 24463325 - 24463392
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatg 67  Q
    ||||||||| ||| |||||||||| ||||||||||| ||||||||  | |||||||||||||| ||||    
T  24463325 ttttagatatattaaataatttatatatttggtttatgttcttgatcaaatacatacattattgaatg 24463392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 103
Target Start/End: Original strand, 28359156 - 28359210
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggacc 103  Q
    ||||||| |||||| ||||||||| |||||| || ||| ||||||||||||||||    
T  28359156 atacataaattatttaatgtatctaaaaagtaaattgtttcttgtaaataggacc 28359210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 103
Target Start/End: Complemental strand, 28989335 - 28989281
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggacc 103  Q
    ||||||| |||||| ||||||||| |||||| || ||| ||||||||||||||||    
T  28989335 atacataaattatttaatgtatctaaaaagtaaattgtttcttgtaaataggacc 28989281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 49 - 114
Target Start/End: Original strand, 1674057 - 1674122
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggaccagaggtagtat 114  Q
    ||||||| |||||| ||||||||| |||| | || |||||||||||||||||| | |||| |||||    
T  1674057 atacataaattatttaatgtatctaaaaaataaattgtctcttgtaaataggatccgagggagtat 1674122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 49 - 98
Target Start/End: Original strand, 40161258 - 40161307
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaata 98  Q
    ||||||| |||||| ||||||||| |||||| || |||||||||||||||    
T  40161258 atacataaattatttaatgtatctaaaaagtaaattgtctcttgtaaata 40161307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 25 - 114
Target Start/End: Complemental strand, 49944920 - 49944831
Alignment:
Q  25 tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggaccagaggtagtat 114  Q
    |||||||| ||  |||| ||| ||||||||  ||||||||||| |||| ||||||||| | | |||| ||||||||||| || |||||||    
T  49944920 tatttggtctatattctagacaagatacatcaattattcaatgaatctaaaaagttaaatttttcttataaataggaccggatgtagtat 49944831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 49 - 117
Target Start/End: Original strand, 10065340 - 10065408
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggaccagaggtagtatcat 117  Q
    ||||||| |||||| ||||||||| |||||| || ||| | |||||||||||| | |||| ||||||||    
T  10065340 atacataaattatttaatgtatctaaaaagtaaattgttttttgtaaataggatcggaggaagtatcat 10065408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 87; Significance: 9e-42; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 885714 - 885600
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||    
T  885714 ttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatctaaaaagtcaactgtctcttgtaaatag 885615  T
Q  100 gaccagaggtagtat 114  Q
    |||| |||| |||||    
T  885614 gaccggagggagtat 885600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 6047908 - 6047794
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||||||| |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||    
T  6047908 ttttagatacattaaataatttatgtatttgatttaggttcttgactagatacatacattattcaatgtatctaaaaagttaactttctgttgtaaatag 6047809  T
Q  100 gaccagaggtagtat 114  Q
    |||| |||| |||||    
T  6047808 gaccggagggagtat 6047794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 31971142 - 31971028
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||| |||||||||||||     
T  31971142 ttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatctaaaaagtcaactttctcttgtaaataa 31971043  T
Q  100 gaccagaggtagtat 114  Q
    |||| |||| |||||    
T  31971042 gaccggagggagtat 31971028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 33859526 - 33859640
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||||||| |||||||||| |||||||||||| |||||||||||||||||||||||||| |||||||| ||||||||||| ||||||||||||||    
T  33859526 ttttagatacattaaataatttatgtatttggtttagtttcttgactagatacatacattattcgatgtatctaaaaagttaactttctcttgtaaatag 33859625  T
Q  100 gaccagaggtagtat 114  Q
    |||| |||| |||||    
T  33859626 gaccggagggagtat 33859640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 7405480 - 7405594
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| || | |||||||||||||     
T  7405480 ttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatctaaaaagtcaattttctcttgtaaataa 7405579  T
Q  100 gaccagaggtagtat 114  Q
    |||| |||| |||||    
T  7405580 gaccggagggagtat 7405594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 24949743 - 24949629
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||||||| |||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| |||||| || | ||||||||||||||    
T  24949743 ttttagatacattaaataatttatgtatttggtttatgttcttgactagatacatacattattcaatgtatctaaaaagtcaattttctcttgtaaatag 24949644  T
Q  100 gaccagaggtagtat 114  Q
    |||| |||| |||||    
T  24949643 gaccggagggagtat 24949629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 34639152 - 34639050
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||  |||||||| |||||| |||||||||||||||||||    
T  34639152 ttttagatacattgaaaaatttatgtatttggtttaggttcttgactagatacatacattattgcatgtatctaaaaagtcaactgtctcttgtaaatag 34639053  T
Q  100 gac 102  Q
    |||    
T  34639052 gac 34639050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 17225355 - 17225242
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||| || ||||||||||     
T  17225355 ttttagatacattaaataatttatatatttggtttaggttcttgactagatacatacattattcaatgtatctaaaaagtcaactttcacttgtaaataa 17225256  T
Q  100 gaccagaggtagta 113  Q
    |||| |||| ||||    
T  17225255 gaccggagggagta 17225242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 390917 - 390803
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||| | |||| | |||| ||||| |    
T  390917 ttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatctaaaaaatcaactttatcttataaattg 390818  T
Q  100 gaccagaggtagtat 114  Q
    |||| ||| ||||||    
T  390817 gaccggagatagtat 390803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 8559025 - 8558910
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||||||  |||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| |||||| || | ||||||||||||||    
T  8559025 ttttagatacata-aataatttatgtatttggtttaggttcttaactagatacatacattattcaatgtatctaaaaagtcaattttctcttgtaaatag 8558927  T
Q  100 gaccagaggtagtatca 116  Q
    |||  |||| |||||||    
T  8558926 gactggagggagtatca 8558910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 6801663 - 6801580
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaac 83  Q
    ||||||||||||| ||||||| || |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  6801663 ttttagatacattaaataattcatgtatttggtttaggttcttgactagatacatacattattcaatgtatctaaaaagttaac 6801580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 30686580 - 30686679
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||||||| |||||||||| ||||| ||||||||| |||||||||||||||||||||||||||||| | |||||| || | ||||||||||||||    
T  30686580 ttttagatacattaaataatttatgtatttcgtttaggtttttgactagatacatacattattcaatgtatttaaaaagtcaattttctcttgtaaatag 30686679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 766539 - 766425
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||||||| |||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||||| |||| |  ||| |||||| |||||||    
T  766539 ttttagatacattaaataatttatgtatttggtttaggttattgactaaatacatacattattcaatgtatctaaaaaatcgactttctcttataaatag 766440  T
Q  100 gaccagaggtagtat 114  Q
    || | |||| |||||    
T  766439 gatcggaggaagtat 766425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 6045793 - 6045690
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||| ||| |||||||||| |||||| ||||| |||||||||||||||||| |||||||||||||||| ||| || |||| |||||| |||||||    
T  6045793 ttttagatagattaaataatttatgtatttgatttagattcttgactagatacatagattattcaatgtatctaaaaggtcaactttctcttataaatag 6045694  T
Q  100 gacc 103  Q
    ||||    
T  6045693 gacc 6045690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 14931294 - 14931403
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||||||| |||||||||| ||||||||||||||| ||     ||||||||||||||||||||||||| |||||| || |||||||||||||||     
T  14931294 ttttagatacattaaataatttatgtatttggtttaggttttt-----gatacatacattattcaatgtatctaaaaagtcaattgtctcttgtaaatat 14931388  T
Q  100 gaccagaggtagtat 114  Q
    |||| |||| |||||    
T  14931389 gaccggagggagtat 14931403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 13144321 - 13144220
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||||||| |||||||||| ||||| |||||||||||||||| ||||||||||| ||| ||||||||| |||||| |||| | | ||||||||||    
T  13144321 ttttagatacattaaataatttatgtattttgtttaggttcttgacttgatacatacataattgaatgtatctaaaaagtcaactttattttgtaaatag 13144222  T
Q  100 ga 101  Q
    ||    
T  13144221 ga 13144220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 22898889 - 22898948
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacatt 59  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||    
T  22898889 ttttagatacattgaataatttatatatttggtttaggttcttgactatatacatacatt 22898948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 44 - 114
Target Start/End: Complemental strand, 22880986 - 22880916
Alignment:
Q  44 actagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggaccagaggtagtat 114  Q
    |||| ||| ||| |||||||||||||||| |||||| || |||||||||||||||||||| ||||||||||    
T  22880986 actaaatatataaattattcaatgtatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtat 22880916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 22880954 - 22881012
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacat 58  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||||| ||||||||||    
T  22880954 ttttagatacattgaataatttatatatttagtttaggttcttgactatatacatacat 22881012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 36428 - 36347
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagtta 81  Q
    ||||||||| ||| |||||||||| |||||||||||| || ||||||||||| ||| |||||||||| ||||| ||||||||    
T  36428 ttttagatatattaaataatttatgtatttggtttagatttttgactagatatataaattattcaatatatctaaaaagtta 36347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 57 - 114
Target Start/End: Complemental strand, 22898908 - 22898851
Alignment:
Q  57 attattcaatgtatcttaaaagttaactgtctcttgtaaataggaccagaggtagtat 114  Q
    |||||||||||||||| |||||| || |||||||||||||||||||| ||||||||||    
T  22898908 attattcaatgtatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtat 22898851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 49 - 117
Target Start/End: Original strand, 24949716 - 24949784
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggaccagaggtagtatcat 117  Q
    ||||||| |||||| ||||||||| |||||| || |||||||||||||||||||| |||| ||||||||    
T  24949716 atacataaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccggagggagtatcat 24949784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 49 - 113
Target Start/End: Original strand, 390890 - 390954
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggaccagaggtagta 113  Q
    ||||||| |||||| ||||||||| |||||| || |||||||||||||||||||| |||| ||||    
T  390890 atacataaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccggagggagta 390954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 49 - 113
Target Start/End: Original strand, 31971115 - 31971179
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggaccagaggtagta 113  Q
    ||||||| |||||| ||||||||| ||| || || |||||||||||||||||||| |||||||||    
T  31971115 atacataaattatttaatgtatctaaaatgtaaattgtctcttgtaaataggaccggaggtagta 31971179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 49 - 103
Target Start/End: Complemental strand, 7405507 - 7405453
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggacc 103  Q
    ||||||| |||||| ||||||||| |||||| || ||||||||||||||||||||    
T  7405507 atacataaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggacc 7405453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 49 - 114
Target Start/End: Original strand, 885687 - 885752
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggaccagaggtagtat 114  Q
    ||||||| |||||| ||||||||| |||||| || | |||||||||||||||| | ||||||||||    
T  885687 atacataaattatttaatgtatctaaaaagtaaattctctcttgtaaataggatcggaggtagtat 885752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 49 - 114
Target Start/End: Original strand, 6045766 - 6045831
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggaccagaggtagtat 114  Q
    ||||||| |||||| ||| ||||| |||||| || |||||||||||||||||||| |||| |||||    
T  6045766 atacataaattatttaatctatctaaaaagtaaattgtctcttgtaaataggaccggagggagtat 6045831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 49 - 102
Target Start/End: Complemental strand, 30686607 - 30686554
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggac 102  Q
    ||||||| |||||| ||||||||| |||||| || |||||||||||||||||||    
T  30686607 atacataaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggac 30686554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 113
Target Start/End: Complemental strand, 14931321 - 14931257
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggaccagaggtagta 113  Q
    ||||||| |||||| ||||||||| |||||| || |||||||| ||||||||||| || ||||||    
T  14931321 atacataaattatttaatgtatctaaaaagtaaattgtctcttataaataggaccggaagtagta 14931257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 1158357 - 1158250
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||| ||||||||||||||| || |||||||| |||  | | |||   ||||||  ||||||||||| |||| ||||||||| ||||| ||||||||||    
T  1158357 ttttaaatacattgaataattgatgtatttggtctagaatatagaccgaatacattaattattcaatgaatctaaaaagttaaatgtcttttgtaaatag 1158258  T
Q  100 gaccagag 107  Q
     |||||||    
T  1158257 aaccagag 1158250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 103
Target Start/End: Complemental strand, 33859553 - 33859499
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggacc 103  Q
    ||||||| |||||| ||||||||| |||||| || ||||| ||||||||||||||    
T  33859553 atacataaattatttaatgtatctaaaaagtaaattgtctattgtaaataggacc 33859499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 103
Target Start/End: Original strand, 34639125 - 34639179
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggacc 103  Q
    ||||||| ||| |||||||||||| |||||| || |||||||| |||||||||||    
T  34639125 atacataaatttttcaatgtatctaaaaagtaaattgtctcttataaataggacc 34639179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 49 - 114
Target Start/End: Original strand, 6047881 - 6047946
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggaccagaggtagtat 114  Q
    ||||||| |||||| ||||||||| |||||| || | ||||||||||||| |||| |||| |||||    
T  6047881 atacataaattatttaatgtatctaaaaagtaaattatctcttgtaaatatgaccggagggagtat 6047946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 49 - 113
Target Start/End: Original strand, 766512 - 766576
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggaccagaggtagta 113  Q
    ||||||| |||||| ||||||||| |||| | || | |||||||||||||||||| |||| ||||    
T  766512 atacataaattatttaatgtatctaaaaaataaattatctcttgtaaataggaccggagggagta 766576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 57 - 101
Target Start/End: Original strand, 17225336 - 17225380
Alignment:
Q  57 attattcaatgtatcttaaaagttaactgtctcttgtaaatagga 101  Q
    |||||| ||||||||| |||||| || ||||||||||||||||||    
T  17225336 attatttaatgtatctaaaaagtaaattgtctcttgtaaatagga 17225380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 81; Significance: 3e-38; HSPs: 2)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 29280 - 29388
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||| ||||||||||||||    
T  29280 ttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatctaaaaagtcaactttctcttgtaaatag 29379  T
Q  100 gaccagagg 108  Q
    |||| ||||    
T  29380 gaccggagg 29388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 113
Target Start/End: Complemental strand, 29307 - 29243
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggaccagaggtagta 113  Q
    ||||||| |||||| ||||||||| |||||| || ||| |||||||||||||||| |||| ||||    
T  29307 atacataaattatttaatgtatctaaaaagtaaattgtttcttgtaaataggaccggagggagta 29243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144 (Bit Score: 79; Significance: 5e-37; HSPs: 2)
Name: scaffold0144
Description:

Target: scaffold0144; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 38861 - 38975
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| | ||| || |||||||||||||||||||    
T  38861 ttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatttaaaatgtcaactgtctcttgtaaatag 38960  T
Q  100 gaccagaggtagtat 114  Q
    |||| |||| |||||    
T  38961 gaccggagggagtat 38975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 49 - 114
Target Start/End: Complemental strand, 38888 - 38823
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggaccagaggtagtat 114  Q
    ||||||| |||||| ||||||||| |||||| || |||||||||||| ||||||| ||| ||||||    
T  38888 atacataaattatttaatgtatctaaaaagtaaattgtctcttgtaactaggaccggagatagtat 38823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2107 (Bit Score: 75; Significance: 1e-34; HSPs: 2)
Name: scaffold2107
Description:

Target: scaffold2107; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 479 - 593
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||||||| |||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||| |||||| || | ||||||||||||||    
T  479 ttttagatacattaaataatttatgtatttcgtttaggttcttgactagatacatacattattcaatgtatctaaaaagtcaattttctcttgtaaatag 578  T
Q  100 gaccagaggtagtat 114  Q
    |||| |||| |||||    
T  579 gaccggagggagtat 593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2107; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 49 - 102
Target Start/End: Complemental strand, 506 - 453
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggac 102  Q
    ||||||| |||||| ||||||||| |||||| || ||| |||||||||||||||    
T  506 atacataaattatttaatgtatctaaaaagtaaattgtttcttgtaaataggac 453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 75; Significance: 1e-34; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 5347835 - 5347721
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| |||||| |||| |||||| |||||||    
T  5347835 ttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattgaatgtatctaaaaagtcaactttctcttataaatag 5347736  T
Q  100 gaccagaggtagtat 114  Q
    |||| |||| |||||    
T  5347735 gaccggagggagtat 5347721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 7107666 - 7107780
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||||||| |||||||||| |||||||||||| || ||||||||||||||| |||||||||||||||| |||||| |||| ||||||||||||||    
T  7107666 ttttagatacattaaataatttatgtatttggtttagatttttgactagatacataaattattcaatgtatctaaaaagtcaactttctcttgtaaatag 7107765  T
Q  100 gaccagaggtagtat 114  Q
    |||| ||||||||||    
T  7107766 gaccggaggtagtat 7107780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 12763265 - 12763379
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| || | |||||||||||||     
T  12763265 ttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatctaaaaagtcaattttctcttgtaaataa 12763364  T
Q  100 gaccagaggtagtat 114  Q
    |||| |||| |||||    
T  12763365 gaccggagggagtat 12763379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 20397851 - 20397965
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||||||| |||||||||| ||||| |||||| ||||||||||||||||||||||||||||||||||| |||||| |||| ||||||||||||||    
T  20397851 ttttagatacattaaataatttatgtattttgtttagattcttgactagatacatacattattcaatgtatctaaaaagtcaactttctcttgtaaatag 20397950  T
Q  100 gaccagaggtagtat 114  Q
    |||| |||| |||||    
T  20397951 gaccggagggagtat 20397965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 34281781 - 34281668
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||| | |||||| |||| ||||||||||||||    
T  34281781 ttttagatacattaaataatttatgtatttggtttaggttcttgactaaatacatacattattcaatgtatgtaaaaagtcaactttctcttgtaaatag 34281682  T
Q  100 gaccagaggtagta 113  Q
    |||| |||| ||||    
T  34281681 gaccggagggagta 34281668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 23248780 - 23248666
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||| ||||||| |||||||||||||||| |||||| |||| | ||||||||||||    
T  23248780 ttttagatacattaaataatttatgtatttggtttaggttcttgactaaatacatatattattcaatgtatctaaaaagtcaactttatcttgtaaatag 23248681  T
Q  100 gaccagaggtagtat 114  Q
    |||| |||| |||||    
T  23248680 gaccggagggagtat 23248666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 30866281 - 30866395
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| |||| | |||| |||||||||||||     
T  30866281 ttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattgaatgtatctaaaaaatcaactttctcttgtaaataa 30866380  T
Q  100 gaccagaggtagtat 114  Q
    |||| |||| |||||    
T  30866381 gaccggagggagtat 30866395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 3411368 - 3411482
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||||||| |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| |||||| || | |||||| |||||||    
T  3411368 ttttagatacattaaataatttatgtatttggtttaggttcttgactaggtacatacattattcaatgtatctaaaaagtcaaatttctcttataaatag 3411467  T
Q  100 gaccagaggtagtat 114  Q
    || | |||| |||||    
T  3411468 gatcggagggagtat 3411482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 12426642 - 12426528
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||||||| |||||||||  |||||||||||| ||||||||||||||||||||||||||||||||||| |||| |||||| |||||| ||||||     
T  12426642 ttttagatacattaaataatttacgtatttggtttagattcttgactagatacatacattattcaatgtatctaaaaaattaactttctcttataaataa 12426543  T
Q  100 gaccagaggtagtat 114  Q
    |||| |||| |||||    
T  12426542 gaccggagggagtat 12426528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 19979606 - 19979507
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatct-taaaagttaactgtctcttgtaaata 98  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||  ||||||||||| |||||| ||||||    
T  19979606 ttttagatacattaaataatttatgtatttggtttaggttcttgactaaatacatacattattcaatgtatctaaaaaagttaactttctcttataaata 19979507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 29770358 - 29770461
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||||||| |||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||| |||||| |||| |  ||| |||||||    
T  29770358 ttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatgcattattcaatgtatctaaaaagtcaactttaacttataaatag 29770457  T
Q  100 gacc 103  Q
    ||||    
T  29770458 gacc 29770461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 5909583 - 5909480
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||| ||| |||||||||| ||||||||| ||| || || | ||||||||||||||    
T  5909583 ttttagatacattaaataatttatgtatttggtttaggttcttgactaaatatatacattattgaatgtatctaaaaggtcaattttctcttgtaaatag 5909484  T
Q  100 gacc 103  Q
    ||||    
T  5909483 gacc 5909480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 10599428 - 10599324
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatct-taaaagttaactgtctcttgtaaata 98  Q
    ||||||||||||  |||||||||| ||||||||||||||  ||||||||||||||||||||||||||||||||  |||||| |||| | |||||||||||    
T  10599428 ttttagatacatacaataatttatgtatttggtttaggtgtttgactagatacatacattattcaatgtatctaaaaaagtcaactttatcttgtaaata 10599329  T
Q  99 ggacc 103  Q
    |||||    
T  10599328 ggacc 10599324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 12085136 - 12085033
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||||||| |||||||||| |||||| ||||||||||||| |  |||||||||||||||||||||||| || ||| || | ||||||||||||||    
T  12085136 ttttagatacattaaataatttatgtatttgatttaggttcttgatttaatacatacattattcaatgtatctaaacagtcaattttctcttgtaaatag 12085037  T
Q  100 gacc 103  Q
    ||||    
T  12085036 gacc 12085033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 7463485 - 7463599
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatct-taaaagttaactgtctcttgtaaata 98  Q
    ||||| |||||||  ||||||||| |||||||||||| ||||||| |||||||||||||||||||||||||||  |||||| || | |||||| ||||||    
T  7463485 ttttaaatacattacataatttatgtatttggtttagattcttgattagatacatacattattcaatgtatctaaaaaagtcaattttctcttataaata 7463584  T
Q  99 ggaccagaggtagta 113  Q
    |||||||||| ||||    
T  7463585 ggaccagagggagta 7463599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 26563957 - 26564059
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||| ||||||||| |||| |||||||||||| |||| ||| |||||| || |||||||||||||||| |||||| || ||| ||||||||||||    
T  26563957 ttttagatatattgaataaattatgtatttggtttagattctagaccagatacgtaaattattcaatgtatctgaaaagtcaattgtttcttgtaaatag 26564056  T
Q  100 gac 102  Q
    |||    
T  26564057 gac 26564059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 32050192 - 32050078
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||| ||| |||||||||| |||||||| ||||||||||| ||||||||||||||||||||| ||||| |||| | || | |||||| |||||||    
T  32050192 ttttagatatattaaataatttatgtatttggtgtaggttcttgagtagatacatacattattcaatatatctaaaaaatcaattttctcttataaatag 32050093  T
Q  100 gaccagaggtagtat 114  Q
     ||| |||| |||||    
T  32050092 aaccggagggagtat 32050078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 25 - 77
Target Start/End: Original strand, 6173997 - 6174049
Alignment:
Q  25 tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaa 77  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  6173997 tatttggtttaggttcttgactagatacatacattattcaatgtatctaaaaa 6174049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 7 - 72
Target Start/End: Original strand, 15074659 - 15074725
Alignment:
Q  7 atacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatct 72  Q
    ||||||| |||||||||| ||||||||||| ||||||||||||||||||||||||||| ||||||||    
T  15074659 atacattaaataatttatgtatttggtttaagttcttgactagatacatacattattcgatgtatct 15074725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 46680941 - 46680840
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||||||| |||||||||| |||||| |||| ||||||||||||||| ||||||| |||||||| ||| |||||| || | | || |||||||||    
T  46680941 ttttagatacattaaataatttatatatttgatttaagttcttgactagatatatacattcttcaatgtgtctaaaaagtcaattttatcatgtaaatag 46680842  T
Q  100 ga 101  Q
    ||    
T  46680841 ga 46680840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 35427771 - 35427657
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaag-ttaactgtctcttgtaaata 98  Q
    ||||||||||||| |||||||||| ||||||||||| ||| ||||||| |||||||||||||| ||||||| ||||||| | || | | |||| ||||||    
T  35427771 ttttagatacattaaataatttatgtatttggtttatgtttttgactatatacatacattattgaatgtat-ttaaaagatcaattttatcttataaata 35427673  T
Q  99 ggaccagaggtagtat 114  Q
    ||||| |||| |||||    
T  35427672 ggaccggagggagtat 35427657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 49 - 113
Target Start/End: Original strand, 23248753 - 23248817
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggaccagaggtagta 113  Q
    ||||||| |||||| ||||||||| |||||| || |||||||||||||||||||| |||||||||    
T  23248753 atacataaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 23248817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 49 - 114
Target Start/End: Original strand, 5909556 - 5909621
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggaccagaggtagtat 114  Q
    ||||||| |||||| ||||||||| |||||| || |||||||||||||||||||| |||| |||||    
T  5909556 atacataaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccggaggaagtat 5909621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 49 - 113
Target Start/End: Original strand, 35427744 - 35427808
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggaccagaggtagta 113  Q
    ||||||| |||||| ||||||||| |||||| || |||||||||||||||||||| |||| ||||    
T  35427744 atacataaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccggagggagta 35427808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 46449890 - 46449806
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaact 84  Q
    ||||| ||||||| |||||||||| |||||||||||| || || | || ||||||| |||||||||||||||| |||||| ||||    
T  46449890 ttttaaatacattaaataatttatatatttggtttagatttttaattaaatacataaattattcaatgtatctaaaaagtcaact 46449806  T

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Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 49 - 103
Target Start/End: Complemental strand, 12763292 - 12763238
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggacc 103  Q
    ||||||| |||||| ||||||||| |||||| || ||||||||||||||||||||    
T  12763292 atacataaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggacc 12763238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 57 - 114
Target Start/End: Original strand, 12426623 - 12426680
Alignment:
Q  57 attattcaatgtatcttaaaagttaactgtctcttgtaaataggaccagaggtagtat 114  Q
    |||||| ||||||||| |||||| |||||||||||||||||| |||| |||| |||||    
T  12426623 attatttaatgtatctaaaaagtaaactgtctcttgtaaataagaccggaggaagtat 12426680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 41 - 98
Target Start/End: Original strand, 36655436 - 36655493
Alignment:
Q  41 ttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaata 98  Q
    ||||||||||||||||||| |||||||||||| |||| | || | |||||||||||||    
T  36655436 ttgactagatacatacattgttcaatgtatctaaaaattcaattttctcttgtaaata 36655493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 113
Target Start/End: Original strand, 5347808 - 5347871
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggaccagaggtagta 113  Q
    ||||||| |||||| ||||||||| |||||| || |||||||||||||||||||| |||| ||||    
T  5347808 atacataaattatttaatgtatct-aaaagtaaattgtctcttgtaaataggaccggagggagta 5347871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 17351583 - 17351512
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatct 72  Q
    |||||||||| || |||||||||| |||||  ||||| ||||||| |||||||||| ||||||||||||||||    
T  17351583 ttttagatacgttaaataatttatgtattta-tttagattcttgagtagatacataaattattcaatgtatct 17351512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 103
Target Start/End: Complemental strand, 3411395 - 3411341
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggacc 103  Q
    ||||||| |||||| ||||||||| |||||| || ||||||||||||||| ||||    
T  3411395 atacataaattatttaatgtatctaaaaagtaaattgtctcttgtaaataagacc 3411341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 103
Target Start/End: Complemental strand, 7107693 - 7107639
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggacc 103  Q
    ||||||| |||||| ||||||||| |||| |||| ||||||||||||||| ||||    
T  7107693 atacataaattatttaatgtatctaaaaaattaattgtctcttgtaaatatgacc 7107639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 103
Target Start/End: Complemental strand, 30866308 - 30866254
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggacc 103  Q
    ||||||| |||||| ||||||||| |||||| || |||||||| |||||||||||    
T  30866308 atacataaattatttaatgtatctaaaaagtaaattgtctcttttaaataggacc 30866254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 49 - 102
Target Start/End: Original strand, 12085109 - 12085162
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggac 102  Q
    ||||||| |||||| ||||||||| |||| | |||||||||||||||| |||||    
T  12085109 atacataaattatttaatgtatctaaaaaataaactgtctcttgtaaaaaggac 12085162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 11 - 79
Target Start/End: Complemental strand, 22055832 - 22055763
Alignment:
Q  11 attgaataatttatt-atttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagt 79  Q
    ||||||||||||||| ||||||||||  ||||| |||  ||||||| |||||||||| ||||| ||||||    
T  22055832 attgaataatttatttatttggtttaaattctttactgaatacataaattattcaatatatctaaaaagt 22055763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 49 - 98
Target Start/End: Original strand, 34281754 - 34281803
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaata 98  Q
    ||||||| |||||| ||||||||| |||||| || |||||||||||||||    
T  34281754 atacataaattatttaatgtatctaaaaagtaaattgtctcttgtaaata 34281803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 49 - 113
Target Start/End: Complemental strand, 20397878 - 20397814
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggaccagaggtagta 113  Q
    ||||||| |||||| ||||||||| |||| | || |||||||| ||||||||||| |||| ||||    
T  20397878 atacataaattatttaatgtatctaaaaattaaattgtctcttataaataggaccggagggagta 20397814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 57 - 113
Target Start/End: Original strand, 27231926 - 27231982
Alignment:
Q  57 attattcaatgtatcttaaaagttaactgtctcttgtaaataggaccagaggtagta 113  Q
    |||||| |||| |||| ||||||||||| | |||| ||||||||||| |||||||||    
T  27231926 attattgaatgaatctaaaaagttaactttttcttataaataggaccggaggtagta 27231982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246 (Bit Score: 72; Significance: 8e-33; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 15191 - 15293
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||| |||| ||||||||||||||||||| ||||||||||| ||||||||||||||    
T  15191 ttttagatacattaaataatttatgtatttggtttaggttcttgacta-atacgtacattattcaatgtatctaaaaagttaactttctcttgtaaatag 15289  T
Q  100 gacc 103  Q
    ||||    
T  15290 gacc 15293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 71; Significance: 3e-32; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 492417 - 492303
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| |||| | |||| |||||| |||||||    
T  492417 ttttagatacattaaataatttatgtatttggtttaggttcttgactaaatacatacattattcaatgtatctaaaaaatcaactttctcttataaatag 492318  T
Q  100 gaccagaggtagtat 114  Q
    |||| |||| |||||    
T  492317 gaccggagggagtat 492303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 49 - 102
Target Start/End: Original strand, 492390 - 492443
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggac 102  Q
    ||||||| |||||| ||||||||| |||||| || ||| |||||||||||||||    
T  492390 atacataaattatttaatgtatctaaaaagtaaattgtttcttgtaaataggac 492443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 70; Significance: 1e-31; HSPs: 2)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 11066 - 11179
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||||||| |||||||||| ||||||||||| |||||||| |||||||||| |||||||||||||||| |||||| |||| ||||||||||||||    
T  11066 ttttagatacattaaataatttatgtatttggtttaagttcttgattagatacatatattattcaatgtatctaaaaagtcaactttctcttgtaaatag 11165  T
Q  100 gaccagaggtagta 113  Q
    |||| |||| ||||    
T  11166 gaccggagggagta 11179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 49 - 114
Target Start/End: Complemental strand, 11093 - 11028
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggaccagaggtagtat 114  Q
    ||||||| |||||| ||||||||| |||||| || ||||||||||||| |||||| |||| |||||    
T  11093 atacataaattatttaatgtatctaaaaagtaaattgtctcttgtaaaaaggaccggagggagtat 11028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0592 (Bit Score: 67; Significance: 8e-30; HSPs: 1)
Name: scaffold0592
Description:

Target: scaffold0592; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 415 - 529
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||| ||| |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| |||||| |||  ||||||||||||||    
T  415 ttttagatatattaaataatttatatatatggtttaggttcttgactagatacatacattattcaatgtatctaaaaagtcaaccttctcttgtaaatag 514  T
Q  100 gaccagaggtagtat 114  Q
    || | |||| |||||    
T  515 gatcggagggagtat 529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 66; Significance: 3e-29; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 77457 - 77344
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||||||| |||||||||| |||||||||||| |||||||||| ||||||| |||||||||||||||| |||||| |||| |||||| |||||||    
T  77457 ttttagatacattaaataatttatgtatttggtttagattcttgactacatacataaattattcaatgtatctgaaaagtcaactttctcttataaatag 77358  T
Q  100 gaccagaggtagta 113  Q
    |||| |||| ||||    
T  77357 gaccggagggagta 77344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 49 - 114
Target Start/End: Original strand, 77430 - 77494
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggaccagaggtagtat 114  Q
    ||||||| |||||| ||||||||| |||| |||| |||||||| ||||||||||| |||| |||||    
T  77430 atacataaattatttaatgtatctaaaaa-ttaattgtctcttataaataggaccggagggagtat 77494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 35990 - 36103
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    ||||||||||||| |||||||||| ||||| |||||||||||| ||||||||||| ||||||| |||| |||| |||||| || | ||||||||||||||    
T  35990 ttttagatacattaaataatttatgtattttgtttaggttcttaactagatacatgcattattgaatgcatctaaaaagtcaattttctcttgtaaatag 36089  T
Q  100 gaccagaggtagta 113  Q
    |||| |||| ||||    
T  36090 gaccggagggagta 36103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 49 - 114
Target Start/End: Complemental strand, 36017 - 35952
Alignment:
Q  49 atacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggaccagaggtagtat 114  Q
    ||||||| |||||| ||||||||| |||||| || |||||||||||||||||||| |||| |||||    
T  36017 atacataaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccggagggagtat 35952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 57; Significance: 7e-24; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 16 - 103
Target Start/End: Complemental strand, 3728 - 3640
Alignment:
Q  16 ataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaataggacc 103  Q
    ||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| |||||| |||| ||| || |||||||||||    
T  3728 ataatttatgtatttggtttaggttcttgactaaatacatacattattcaatgtatctaaaaagtcaactttcttttataaataggacc 3640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 57 - 113
Target Start/End: Original strand, 3733 - 3789
Alignment:
Q  57 attattcaatgtatcttaaaagttaactgtctcttgtaaataggaccagaggtagta 113  Q
    |||||| ||||||||| |||||| || |||||||||||||||  |||||||| ||||    
T  3733 attatttaatgtatctaaaaagtaaattgtctcttgtaaataaaaccagagggagta 3789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 15 - 99
Target Start/End: Original strand, 5266 - 5351
Alignment:
Q  15 aataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaactgtctcttgtaaatag 99  Q
    |||||||||| ||||||||||||||||||||||| ||||||| |||||||||| ||||| ||||||||| | ||||||||||||||    
T  5266 aataatttatatatttggtttaggttcttgactaaatacatatattattcaatttatctaaaaagttaattttctcttgtaaatag 5351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0421 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0421
Description:

Target: scaffold0421; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 170 - 250
Target Start/End: Complemental strand, 4759 - 4678
Alignment:
Q  170 ccaccgaattaataaggtttgattccnnnnnnnn-ttcaaattcaaacagccaaatactttgaagttcaaatagtggaattt 250  Q
    ||||||||||||||||||||||||||         ||||||||||||||||||||||||||||| |||||||||||||||||    
T  4759 ccaccgaattaataaggtttgattccaaaaaaaaattcaaattcaaacagccaaatactttgaaattcaaatagtggaattt 4678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 183904 - 183821
Alignment:
Q  1 ttttagatacattgaataatttat-tatttggtttaggttcttgactagatacatacattattcaatgtatcttaaaagttaact 84  Q
    ||||| ||| |||||||||||||| |||   |||||| || ||||| | ||||||| |||||||||||||| |||||||||||||    
T  183904 ttttaaatatattgaataatttatgtatcaagtttagatttttgaccaaatacataaattattcaatgtat-ttaaaagttaact 183821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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