View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19155_high_2 (Length: 267)

Name: NF19155_high_2
Description: NF19155
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19155_high_2
NF19155_high_2
[»] chr2 (3 HSPs)
chr2 (91-255)||(27488482-27488647)
chr2 (91-158)||(27878244-27878312)
chr2 (105-180)||(18371556-18371631)
[»] chr6 (3 HSPs)
chr6 (100-255)||(26272943-26273100)
chr6 (91-189)||(22886073-22886172)
chr6 (120-181)||(22728130-22728191)
[»] chr1 (2 HSPs)
chr1 (91-178)||(14458736-14458823)
chr1 (95-255)||(17774316-17774476)
[»] chr8 (8 HSPs)
chr8 (95-214)||(17938038-17938157)
chr8 (99-255)||(17729630-17729787)
chr8 (94-180)||(17816421-17816507)
chr8 (130-180)||(24175586-24175636)
chr8 (105-178)||(28914732-28914806)
chr8 (132-181)||(8989377-8989426)
chr8 (91-181)||(22471450-22471541)
chr8 (141-211)||(22741738-22741808)
[»] chr5 (4 HSPs)
chr5 (91-178)||(30074367-30074454)
chr5 (120-181)||(23190097-23190158)
chr5 (105-197)||(24189318-24189411)
chr5 (120-181)||(20057149-20057210)
[»] chr3 (5 HSPs)
chr3 (110-253)||(26883565-26883708)
chr3 (120-181)||(21515866-21515927)
chr3 (91-177)||(8364535-8364622)
chr3 (106-208)||(15485874-15485975)
chr3 (120-208)||(12755215-12755303)
[»] chr7 (6 HSPs)
chr7 (91-178)||(28489899-28489986)
chr7 (107-196)||(21935806-21935896)
chr7 (91-181)||(7229776-7229866)
chr7 (131-181)||(11968821-11968871)
chr7 (141-192)||(23008904-23008955)
chr7 (131-181)||(11976816-11976866)
[»] chr4 (1 HSPs)
chr4 (140-181)||(3462734-3462775)


Alignment Details
Target: chr2 (Bit Score: 122; Significance: 1e-62; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 91 - 255
Target Start/End: Original strand, 27488482 - 27488647
Alignment:
Q  91 tatcgagggaattctttgtaatcataaaaattgtaatcaaatttcaacaatagtggaagtccttaatagagacgtattctatcaagaagagaaaacatac 190  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||| |||| |||    
T  27488482 tatcgagagaattctttgtaatcataaaaattgtaatcaaatttcaacaatagtggaagtccttgatagagacgtattctatcaggaagagtaaacgtac 27488581  T
Q  191 cctgaagtgagaacgaaatgga-aacaactataaaaattatggtgttcttctcctccctttcctct 255  Q
    || |||| |||||||||||||| ||||||| |||||||||||||||||||||| ||||||||||||    
T  27488582 cccgaagcgagaacgaaatggagaacaactgtaaaaattatggtgttcttctcttccctttcctct 27488647  T

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Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 91 - 158
Target Start/End: Original strand, 27878244 - 27878312
Alignment:
Q  91 tatcgagggaattctttgtaatcataa-aaattgtaatcaaatttcaacaatagtggaagtccttaata 158  Q
    ||||||||||||||||||||||||||| || || ||| ||| |||| |||||||||||||||| |||||    
T  27878244 tatcgagggaattctttgtaatcataacaatttataaacaattttcgacaatagtggaagtccctaata 27878312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 105 - 180
Target Start/End: Original strand, 18371556 - 18371631
Alignment:
Q  105 tttgtaatcataaaaatt-gtaatcaaatttcaacaatagtggaagtccttaatagagacgtattctatcaagaaga 180  Q
    ||||||||||||| |||| |||| ||  |||||||| |||||||||||||| |||||||| | ||||| ||||||||    
T  18371556 tttgtaatcataacaatttgtaaacatttttcaaca-tagtggaagtccttgatagagacattttctaacaagaaga 18371631  T

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Target: chr6 (Bit Score: 79; Significance: 5e-37; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 100 - 255
Target Start/End: Complemental strand, 26273100 - 26272943
Alignment:
Q  100 aattctttgtaatcataaaaattgtaatcaaatttcaacaatagtggaagtccttaatagagacgtattctatcaagaagagaaaacataccctgaagtg 199  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||||| |||| ||| |||| ||||||||||||||||| |  | |||||||||| |    
T  26273100 aattctttataatcataacaattgtaatcaaatttcaacaatagtggaagcccttgatatagacatattctatcaagaagagcagtcgtaccctgaagcg 26273001  T
Q  200 agaacgaaatggaaa--caactataaaaattatggtgttcttctcctccctttcctct 255  Q
    || ||||||  ||||  | |||||||||||||||||||||||||| |||| |||||||    
T  26273000 aggacgaaagagaaaatctactataaaaattatggtgttcttctcttcccattcctct 26272943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 91 - 189
Target Start/End: Original strand, 22886073 - 22886172
Alignment:
Q  91 tatcgagggaattctttgtaatcataa-aaattgtaatcaaatttcaacaatagtggaagtccttaatagagacgtattctatcaagaagagaaaacata 189  Q
    ||||||||||||| ||||||||||||| || || ||| ||| |||||||||||||  |||| | | |||  ||||| ||||||||||||||| |||||||    
T  22886073 tatcgagggaattatttgtaatcataacaatttctaaacaattttcaacaatagtaaaagttcatgataacgacgttttctatcaagaagagtaaacata 22886172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 120 - 181
Target Start/End: Complemental strand, 22728191 - 22728130
Alignment:
Q  120 attgtaatcaaatttcaacaatagtggaagtccttaatagagacgtattctatcaagaagag 181  Q
    ||||||||||||||||||   ||||| ||||| || |||||||| | |||||||||||||||    
T  22728191 attgtaatcaaatttcaattttagtgaaagtctttgatagagaccttttctatcaagaagag 22728130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 68; Significance: 2e-30; HSPs: 2)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 91 - 178
Target Start/End: Complemental strand, 14458823 - 14458736
Alignment:
Q  91 tatcgagggaattctttgtaatcataaaaattgtaatcaaatttcaacaatagtggaagtccttaatagagacgtattctatcaagaa 178  Q
    ||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| ||||| |||||||| ||||||||||||||    
T  14458823 tatcgagggaattctatgtaatcataacaattgtaatcaaatttcaacaatagtggaaatccttgatagagacatattctatcaagaa 14458736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 95 - 255
Target Start/End: Original strand, 17774316 - 17774476
Alignment:
Q  95 gagggaattctttgtaatcataaaaattgtaatcaaatttcaacaatagtggaagtccttaatagagacgtattctatcaagaagagaaaacataccctg 194  Q
    ||||| |||| ||||||||| || |||||||||||||||| |||||  ||| ||||| || ||||||||||||||||||| |||||| | || | ||| |    
T  17774316 gagggtattcattgtaatcacaacaattgtaatcaaattttaacaaaggtgaaagtcgttgatagagacgtattctatcacgaagagtagacgtgccccg 17774415  T
Q  195 aagtgagaacgaaa-tggaaacaactataaaaattatggtgttcttctcctccctttcctct 255  Q
    ||| ||| ||||||  |||||| | ||| |||||||||||||| ||||| || |||||||||    
T  17774416 aagcgaggacgaaagaggaaactattat-aaaattatggtgttgttctcttctctttcctct 17774476  T

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Target: chr8 (Bit Score: 60; Significance: 1e-25; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 95 - 214
Target Start/End: Original strand, 17938038 - 17938157
Alignment:
Q  95 gagggaattctttgtaatcataaaaattgtaatcaaatttcaacaatagtggaagtccttaatagagacgtattctatcaagaagagaaaacataccctg 194  Q
    |||| |||||||||||||| ||| |||| |||| |||||||||||||||||||  ||||| |||||||| |||||||||||||| || |||| |||||||    
T  17938038 gaggaaattctttgtaatcttaacaattataatgaaatttcaacaatagtggatatccttgatagagacatattctatcaagaaaagtaaacgtaccctg 17938137  T
Q  195 aagtgagaacgaaatggaaa 214  Q
    ||| ||| |||||| |||||    
T  17938138 aagcgaggacgaaagggaaa 17938157  T

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Target: chr8; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 99 - 255
Target Start/End: Complemental strand, 17729787 - 17729630
Alignment:
Q  99 gaattctttgtaatcataaaaattgtaatcaaatttcaacaatagtggaagtccttaatagagacgtattctatcaagaagagaaaacataccctgaagt 198  Q
    |||||||||||||||| || ||||||| ||||||||||||||||||| || ||||| |||||||| |||| |||||||||||| | |  | ||  ||||     
T  17729787 gaattctttgtaatcacaacaattgtagtcaaatttcaacaatagtgaaaatccttgatagagacatattttatcaagaagagtagattttcctcgaagc 17729688  T
Q  199 gagaacgaaat-ggaaacaactataaaaattatggtgttcttctcctccctttcctct 255  Q
    ||| ||||||| || ||| ||||||||||||   ||||||||||| || |||||||||    
T  17729687 gaggacgaaatggggaactactataaaaatttcagtgttcttctcttctctttcctct 17729630  T

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Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 94 - 180
Target Start/End: Original strand, 17816421 - 17816507
Alignment:
Q  94 cgagggaattctttgtaatcataaaaattgtaatcaaatttcaac-aatagtggaagtccttaatagagacgtattctatcaagaaga 180  Q
    ||||||||||||| ||||||| || | |||||||||||||||||| || |||||||||| || ||| | | |||||||||||||||||    
T  17816421 cgagggaattctt-gtaatcacaacatttgtaatcaaatttcaacaaaaagtggaagtcattgataaacatgtattctatcaagaaga 17816507  T

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Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 130 - 180
Target Start/End: Complemental strand, 24175636 - 24175586
Alignment:
Q  130 aatttcaacaatagtggaagtccttaatagagacgtattctatcaagaaga 180  Q
    |||||||||||||||||||||| || ||||||| || ||||||||||||||    
T  24175636 aatttcaacaatagtggaagtctttgatagagatgttttctatcaagaaga 24175586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 105 - 178
Target Start/End: Complemental strand, 28914806 - 28914732
Alignment:
Q  105 tttgtaatcataaaaatt-gtaatcaaatttcaacaatagtggaagtccttaatagagacgtattctatcaagaa 178  Q
    ||||||||||||| |||| |||| ||  ||||||||||||||||||||||| ||| || ||| ||||||||||||    
T  28914806 tttgtaatcataacaatttgtaaacatttttcaacaatagtggaagtccttgataaaggcgttttctatcaagaa 28914732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 132 - 181
Target Start/End: Original strand, 8989377 - 8989426
Alignment:
Q  132 tttcaacaatagtggaagtccttaatagagacgtattctatcaagaagag 181  Q
    |||||| |||||||||||||||| ||||||| || |||||||||||||||    
T  8989377 tttcaataatagtggaagtccttgatagagaagttttctatcaagaagag 8989426  T

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Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 91 - 181
Target Start/End: Complemental strand, 22471541 - 22471450
Alignment:
Q  91 tatcgagggaattctttgtaatcataaaaatt-gtaatcaaatttcaacaatagtggaagtccttaatagagacgtattctatcaagaagag 181  Q
    ||||||||||||  ||||||||||||| |||| || |  |  ||||||||||||| |||||| ||||||||||||| |||||| || |||||    
T  22471541 tatcgagggaatcttttgtaatcataacaatttgtgaatatttttcaacaatagtagaagtctttaatagagacgttttctataaaaaagag 22471450  T

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Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 211
Target Start/End: Original strand, 22741738 - 22741808
Alignment:
Q  141 tagtggaagtccttaatagagacgtattctatcaagaagagaaaacataccctgaagtgagaacgaaatgg 211  Q
    |||||||||| ||| |||| ||||| ||||||||||||||| | |||||| |  ||||||| |||||||||    
T  22741738 tagtggaagttcttgatagcgacgttttctatcaagaagagtagacatactccaaagtgaggacgaaatgg 22741808  T

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Target: chr5 (Bit Score: 60; Significance: 1e-25; HSPs: 4)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 91 - 178
Target Start/End: Original strand, 30074367 - 30074454
Alignment:
Q  91 tatcgagggaattctttgtaatcataaaaattgtaatcaaatttcaacaatagtggaagtccttaatagagacgtattctatcaagaa 178  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||| || | |||||| |||||||| ||||||||| ||||    
T  30074367 tatcgagggaattctttgtaatcataacaattgtaatcaaatttcaacaataatgcatgtccttgatagagacatattctatcgagaa 30074454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 120 - 181
Target Start/End: Complemental strand, 23190158 - 23190097
Alignment:
Q  120 attgtaatcaaatttcaacaatagtggaagtccttaatagagacgtattctatcaagaagag 181  Q
    |||||||||||||||| |||||||||||||| |||||||||||||| |||||||||||||||    
T  23190158 attgtaatcaaatttctacaatagtggaagttcttaatagagacgttttctatcaagaagag 23190097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 105 - 197
Target Start/End: Original strand, 24189318 - 24189411
Alignment:
Q  105 tttgtaatcataaaaatt-gtaatcaaatttcaacaatagtggaagtccttaatagagacgtattctatcaagaagagaaaacataccctgaag 197  Q
    |||||||||||||||||| |||| ||  | | || || |||||||||| || ||| ||||||||| |||||||||||| |||||||||||||||    
T  24189318 tttgtaatcataaaaatttgtaaacatttctaaaaaaaagtggaagtctttgataaagacgtattttatcaagaagagtaaacataccctgaag 24189411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 120 - 181
Target Start/End: Complemental strand, 20057210 - 20057149
Alignment:
Q  120 attgtaatcaaatttcaacaatagtggaagtccttaatagagacgtattctatcaagaagag 181  Q
    |||||||||||||||| |   |||||||||||| | ||||||||||  ||||||||||||||    
T  20057210 attgtaatcaaatttctattttagtggaagtccatgatagagacgttctctatcaagaagag 20057149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 53; Significance: 2e-21; HSPs: 5)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 110 - 253
Target Start/End: Original strand, 26883565 - 26883708
Alignment:
Q  110 aatcataaaaat-tgtaatcaaatttcaacaatagtggaagtccttaatagagacgtattctatcaagaagagaaaacataccctgaagtgagaacgaaa 208  Q
    |||||||| ||| ||||| ||| | ||||||||||||||||||||  ||||| |||| ||||||||||||||| | || ||||| |||| ||| ||||||    
T  26883565 aatcataacaatatgtaaacaattgtcaacaatagtggaagtcctcgatagatacgttttctatcaagaagagtagacgtaccccgaagcgaggacgaaa 26883664  T
Q  209 tggaaacaactataaaaattatggtgttcttctcctccctttcct 253  Q
     |||||| ||||| |||||| ||||||||||||| ||| ||||||    
T  26883665 gggaaactactat-aaaattttggtgttcttctcttccatttcct 26883708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 120 - 181
Target Start/End: Complemental strand, 21515927 - 21515866
Alignment:
Q  120 attgtaatcaaatttcaacaatagtggaagtccttaatagagacgtattctatcaagaagag 181  Q
    ||||||||||||||||||||||||||||||||||| ||||||| ||||| ||||||||||||    
T  21515927 attgtaatcaaatttcaacaatagtggaagtccttgatagagatgtattatatcaagaagag 21515866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 91 - 177
Target Start/End: Original strand, 8364535 - 8364622
Alignment:
Q  91 tatcgagggaattctttgtaatcataaaaatt-gtaatcaaatttcaacaatagtggaagtccttaatagagacgtattctatcaaga 177  Q
    |||||| ||||||||||| ||||||||||||| |||| ||| ||||||||||||||||||||||| |||||| ||| || ||||||||    
T  8364535 tatcgatggaattctttgcaatcataaaaatttgtaaacaattttcaacaatagtggaagtccttgatagaggcgttttttatcaaga 8364622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 106 - 208
Target Start/End: Complemental strand, 15485975 - 15485874
Alignment:
Q  106 ttgtaatcataaaaattgtaatcaaatttcaacaatagtggaagtccttaatagagacgtattctatcaagaagagaaaacataccctgaagtgagaacg 205  Q
    |||||||||||| | |||||||||||||| |||||| || ||||||||| ||||||||||  |||||||||||||| | | |||||| |||||||| |||    
T  15485975 ttgtaatcataaca-ttgtaatcaaattttaacaattgttgaagtccttgatagagacgttctctatcaagaagagtatatataccccgaagtgaggacg 15485877  T
Q  206 aaa 208  Q
    |||    
T  15485876 aaa 15485874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 208
Target Start/End: Original strand, 12755215 - 12755303
Alignment:
Q  120 attgtaatcaaatttcaacaatagtggaagtccttaatagagacgtattctatcaagaagagaaaacataccctgaagtgagaacgaaa 208  Q
    ||||||||||||||||||   ||| ||||| |||| ||| |||||| || |||| ||||||| | ||||||| ||||| ||| ||||||    
T  12755215 attgtaatcaaatttcaattttagcggaagcccttgataaagacgttttttatccagaagagtagacataccatgaagcgaggacgaaa 12755303  T

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Target: chr7 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 6)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 91 - 178
Target Start/End: Original strand, 28489899 - 28489986
Alignment:
Q  91 tatcgagggaattctttgtaatcataaaaatt-gtaatcaaatttcaacaatagtggaagtccttaatagagacgtattctatcaagaa 178  Q
    ||||||||||||||||| ||||||||| |||| |||| ||| | ||||||||| || |||||||| ||||||| |||||||||||||||    
T  28489899 tatcgagggaattctttctaatcataacaatttgtaaacaattctcaacaataatg-aagtccttgatagagatgtattctatcaagaa 28489986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 107 - 196
Target Start/End: Complemental strand, 21935896 - 21935806
Alignment:
Q  107 tgtaatcataaaaatt-gtaatcaaatttcaacaatagtggaagtccttaatagagacgtattctatcaagaagagaaaacataccctgaa 196  Q
    |||||||||||||||| |||| ||  |||||||||||||| |||||||| ||| ||| || ||||||||||||||| |||  |||||||||    
T  21935896 tgtaatcataaaaatttgtaaacatttttcaacaatagtgtaagtccttgataaagatgttttctatcaagaagagtaaaggtaccctgaa 21935806  T

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Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 91 - 181
Target Start/End: Complemental strand, 7229866 - 7229776
Alignment:
Q  91 tatcgagggaattctttgtaatcataaaaatt-gtaatcaaatttcaacaatagtggaagtccttaatagagacgtattctatcaagaagag 181  Q
    |||||| |||||  ||||||||||||| |||| |||| ||  |||||||| |||||||||||||| |||||||  |||||||||||||||||    
T  7229866 tatcgaaggaatcttttgtaatcataacaatttgtaaacatttttcaaca-tagtggaagtccttgatagagagatattctatcaagaagag 7229776  T

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Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 131 - 181
Target Start/End: Original strand, 11968821 - 11968871
Alignment:
Q  131 atttcaacaatagtggaagtccttaatagagacgtattctatcaagaagag 181  Q
    |||||||||||||||||||| ||| |||||||||| ||||| |||||||||    
T  11968821 atttcaacaatagtggaagttcttgatagagacgttttctaccaagaagag 11968871  T

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Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 141 - 192
Target Start/End: Original strand, 23008904 - 23008955
Alignment:
Q  141 tagtggaagtccttaatagagacgtattctatcaagaagagaaaacataccc 192  Q
    ||||||||||||||  ||||||||| ||||||||||||||| |||| |||||    
T  23008904 tagtggaagtccttggtagagacgttttctatcaagaagagtaaacgtaccc 23008955  T

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Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 181
Target Start/End: Original strand, 11976816 - 11976866
Alignment:
Q  131 atttcaacaatagtggaagtccttaatagagacgtattctatcaagaagag 181  Q
    |||||||||||||||||||| ||| ||| ||| || |||||||||||||||    
T  11976816 atttcaacaatagtggaagttcttgataaagatgttttctatcaagaagag 11976866  T

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Target: chr4 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 140 - 181
Target Start/End: Complemental strand, 3462775 - 3462734
Alignment:
Q  140 atagtggaagtccttaatagagacgtattctatcaagaagag 181  Q
    ||||||||||||||| |||||||| | |||||||||||||||    
T  3462775 atagtggaagtccttgatagagacattttctatcaagaagag 3462734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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