View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19156_high_7 (Length: 247)
Name: NF19156_high_7
Description: NF19156
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19156_high_7 |
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Alignment Details
Target: chr1 (Bit Score: 157; Significance: 1e-83; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 17 - 220
Target Start/End: Complemental strand, 2205818 - 2205618
Alignment:
| Q |
17 |
tcattaaaaacccatcctctatataatacaacttgatcactcctattttgcagtgccctaaaactatacattaaattttgttcaactgagttaaggaggt |
116 |
Q |
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| T |
2205818 |
tcattaaaaacccatcctctatataatacaacttgatcactcctattttgcagtgccctaaaactatacattaaattttgttcaactgagtta---aggt |
2205722 |
T |
|
| Q |
117 |
tcttgttccattgacaataaataattatatcccactctaattcaccgccatggatgtctt---caccaccacctccatattcatcatcgactcaaatcca |
213 |
Q |
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| T |
2205721 |
tattgttccattgacaata---aattatatcccactctaattcaccgccatcgatgtcttcaccaccaccacctccatattcatcatcgactcaaatcca |
2205625 |
T |
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| Q |
214 |
atccatt |
220 |
Q |
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||||||| |
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| T |
2205624 |
atccatt |
2205618 |
T |
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