View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1915_high_3 (Length: 331)

Name: NF1915_high_3
Description: NF1915
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1915_high_3
NF1915_high_3
[»] chr8 (55 HSPs)
chr8 (18-321)||(2518504-2518801)
chr8 (64-261)||(10824322-10824511)
chr8 (137-268)||(13171880-13172007)
chr8 (69-184)||(44373780-44373895)
chr8 (61-258)||(44681194-44681387)
chr8 (61-268)||(41971933-41972132)
chr8 (61-268)||(36143293-36143492)
chr8 (65-268)||(16917108-16917306)
chr8 (119-280)||(8879653-8879811)
chr8 (61-268)||(29520584-29520777)
chr8 (119-260)||(32043522-32043659)
chr8 (61-267)||(33511285-33511482)
chr8 (85-261)||(10080086-10080256)
chr8 (120-253)||(15853691-15853823)
chr8 (93-184)||(12611539-12611630)
chr8 (119-268)||(36395162-36395308)
chr8 (210-280)||(6510726-6510796)
chr8 (104-181)||(29645044-29645121)
chr8 (93-228)||(9695595-9695726)
chr8 (62-229)||(11733710-11733873)
chr8 (122-280)||(36565457-36565612)
chr8 (209-268)||(28300411-28300470)
chr8 (137-184)||(41444557-41444604)
chr8 (119-252)||(18474173-18474298)
chr8 (119-173)||(23023258-23023312)
chr8 (62-164)||(30559717-30559819)
chr8 (199-267)||(16252860-16252929)
chr8 (119-184)||(18125177-18125242)
chr8 (120-184)||(40813328-40813392)
chr8 (119-261)||(45419170-45419306)
chr8 (199-253)||(16705701-16705756)
chr8 (95-174)||(17491810-17491889)
chr8 (119-174)||(35643814-35643869)
chr8 (119-280)||(36545058-36545218)
chr8 (74-243)||(43904833-43905000)
chr8 (137-268)||(45512726-45512854)
chr8 (61-239)||(29700233-29700403)
chr8 (142-253)||(7103201-7103316)
chr8 (119-184)||(12491351-12491416)
chr8 (185-261)||(16351321-16351398)
chr8 (62-253)||(5908581-5908772)
chr8 (209-280)||(30783339-30783411)
chr8 (199-253)||(36069582-36069637)
chr8 (210-280)||(37077676-37077747)
chr8 (209-268)||(38667478-38667537)
chr8 (216-267)||(43732492-43732543)
chr8 (119-173)||(1549590-1549644)
chr8 (199-268)||(30456500-30456569)
chr8 (104-157)||(9905079-9905132)
chr8 (185-268)||(33666773-33666855)
chr8 (62-131)||(35914757-35914826)
chr8 (104-172)||(13589502-13589570)
chr8 (110-174)||(30748471-30748535)
chr8 (137-181)||(42493537-42493581)
chr8 (232-268)||(44681398-44681434)
[»] chr7 (60 HSPs)
chr7 (61-268)||(47848598-47848801)
chr7 (61-184)||(26742051-26742174)
chr7 (61-268)||(36101920-36102123)
chr7 (61-267)||(48736055-48736256)
chr7 (104-268)||(36136688-36136848)
chr7 (59-267)||(39811882-39812086)
chr7 (62-280)||(1740708-1740927)
chr7 (119-280)||(31005134-31005292)
chr7 (104-280)||(36514405-36514576)
chr7 (119-268)||(34869344-34869489)
chr7 (78-184)||(40169653-40169759)
chr7 (61-267)||(43282330-43282534)
chr7 (74-261)||(46356024-46356207)
chr7 (199-280)||(27021994-27022077)
chr7 (119-280)||(35906414-35906572)
chr7 (119-268)||(37617868-37618014)
chr7 (119-280)||(45836693-45836851)
chr7 (119-280)||(49029187-49029345)
chr7 (30-184)||(12966026-12966180)
chr7 (119-268)||(13859221-13859366)
chr7 (61-261)||(28628088-28628284)
chr7 (93-170)||(35713713-35713790)
chr7 (119-184)||(36869457-36869522)
chr7 (61-170)||(38135368-38135476)
chr7 (119-280)||(43281587-43281743)
chr7 (142-280)||(30200199-30200330)
chr7 (119-280)||(38606916-38607073)
chr7 (93-184)||(42187474-42187565)
chr7 (61-163)||(6420645-6420747)
chr7 (110-268)||(25579281-25579429)
chr7 (119-184)||(6374872-6374937)
chr7 (62-181)||(27893707-27893823)
chr7 (119-261)||(33072885-33073021)
chr7 (119-280)||(11593871-11594029)
chr7 (109-184)||(19262636-19262711)
chr7 (209-248)||(47796437-47796476)
chr7 (200-280)||(28542173-28542254)
chr7 (118-184)||(38920798-38920864)
chr7 (119-268)||(39906583-39906728)
chr7 (119-252)||(44855385-44855514)
chr7 (74-164)||(48202870-48202960)
chr7 (119-184)||(12841488-12841553)
chr7 (200-264)||(25826759-25826824)
chr7 (119-184)||(31682815-31682880)
chr7 (119-255)||(41948453-41948585)
chr7 (120-184)||(2885936-2886000)
chr7 (122-182)||(7189442-7189502)
chr7 (120-184)||(27021906-27021970)
chr7 (79-253)||(8492406-8492576)
chr7 (199-268)||(14593685-14593755)
chr7 (120-261)||(28020895-28021032)
chr7 (210-260)||(29653854-29653904)
chr7 (210-268)||(36651918-36651976)
chr7 (61-173)||(5418094-5418207)
chr7 (218-267)||(37595630-37595679)
chr7 (199-251)||(40139204-40139257)
chr7 (90-158)||(9797888-9797956)
chr7 (232-268)||(16013208-16013244)
chr7 (137-173)||(28542127-28542163)
chr7 (119-183)||(29650389-29650453)
[»] chr2 (45 HSPs)
chr2 (61-276)||(38434866-38435079)
chr2 (74-266)||(9556537-9556724)
chr2 (61-253)||(43752102-43752290)
chr2 (68-184)||(18958911-18959031)
chr2 (74-168)||(3481161-3481255)
chr2 (74-184)||(12141548-12141658)
chr2 (119-280)||(41763255-41763412)
chr2 (210-280)||(16097290-16097361)
chr2 (119-280)||(38429795-38429953)
chr2 (93-261)||(42092450-42092612)
chr2 (111-268)||(40759023-40759177)
chr2 (88-228)||(13240927-13241063)
chr2 (119-280)||(8180691-8180849)
chr2 (213-268)||(9647908-9647963)
chr2 (119-280)||(36183362-36183520)
chr2 (88-165)||(12026187-12026264)
chr2 (209-253)||(21834492-21834536)
chr2 (66-268)||(45077672-45077877)
chr2 (119-261)||(3866003-3866141)
chr2 (61-184)||(6218971-6219094)
chr2 (110-180)||(14197366-14197437)
chr2 (187-253)||(41858679-41858746)
chr2 (110-261)||(7825289-7825438)
chr2 (85-264)||(23714440-23714612)
chr2 (85-264)||(24102112-24102284)
chr2 (210-268)||(41779606-41779664)
chr2 (119-184)||(25834685-25834750)
chr2 (63-160)||(42149803-42149900)
chr2 (200-268)||(44411640-44411709)
chr2 (104-184)||(11017318-11017398)
chr2 (104-223)||(37481815-37481930)
chr2 (137-184)||(11412725-11412772)
chr2 (119-252)||(12734641-12734768)
chr2 (137-183)||(12882271-12882317)
chr2 (120-280)||(41197442-41197599)
chr2 (210-268)||(41779032-41779090)
chr2 (119-173)||(41779521-41779575)
chr2 (119-184)||(2610592-2610657)
chr2 (119-184)||(3243866-3243931)
chr2 (119-184)||(38452898-38452963)
chr2 (138-183)||(38860178-38860223)
chr2 (69-174)||(41858745-41858850)
chr2 (209-261)||(9579000-9579052)
chr2 (209-253)||(17581407-17581451)
chr2 (88-184)||(44411716-44411812)
[»] chr4 (72 HSPs)
chr4 (85-268)||(54470131-54470310)
chr4 (62-261)||(33709850-33710050)
chr4 (61-280)||(29398730-29398945)
chr4 (119-280)||(31960027-31960185)
chr4 (119-250)||(51252674-51252799)
chr4 (209-269)||(2588904-2588964)
chr4 (74-174)||(47611741-47611841)
chr4 (77-184)||(28497494-28497600)
chr4 (199-280)||(45185305-45185388)
chr4 (209-266)||(17668410-17668467)
chr4 (111-184)||(28236187-28236260)
chr4 (65-251)||(50662330-50662511)
chr4 (108-184)||(30621406-30621482)
chr4 (110-182)||(42639224-42639296)
chr4 (68-180)||(56225074-56225186)
chr4 (200-254)||(10208976-10209031)
chr4 (61-148)||(13805420-13805507)
chr4 (73-175)||(45185194-45185296)
chr4 (119-268)||(56375214-56375359)
chr4 (145-280)||(12494661-12494793)
chr4 (209-270)||(17666341-17666402)
chr4 (201-261)||(20105761-20105822)
chr4 (211-267)||(17900405-17900461)
chr4 (119-280)||(23906508-23906672)
chr4 (120-184)||(31459034-31459098)
chr4 (104-172)||(38903918-38903986)
chr4 (104-184)||(41192840-41192920)
chr4 (119-280)||(43433829-43433993)
chr4 (88-184)||(43562691-43562787)
chr4 (119-280)||(48622756-48622912)
chr4 (137-181)||(49987435-49987479)
chr4 (119-267)||(50471453-50471595)
chr4 (119-280)||(436140-436298)
chr4 (111-268)||(1777222-1777373)
chr4 (119-280)||(33191061-33191219)
chr4 (119-280)||(33227120-33227278)
chr4 (210-280)||(35690215-35690286)
chr4 (88-183)||(46715554-46715649)
chr4 (65-181)||(50680746-50680863)
chr4 (119-253)||(52569728-52569858)
chr4 (61-148)||(54934940-54935027)
chr4 (120-261)||(37797783-37797920)
chr4 (74-184)||(53707798-53707908)
chr4 (138-184)||(55768733-55768779)
chr4 (138-184)||(55832989-55833035)
chr4 (119-184)||(26037718-26037783)
chr4 (201-253)||(34233323-34233376)
chr4 (137-261)||(44047579-44047699)
chr4 (85-173)||(31339552-31339639)
chr4 (209-268)||(21106908-21106967)
chr4 (210-280)||(45205148-45205219)
chr4 (209-268)||(45423543-45423602)
chr4 (88-174)||(1427466-1427552)
chr4 (119-185)||(7092433-7092499)
chr4 (209-268)||(11389644-11389705)
chr4 (212-250)||(20998954-20998992)
chr4 (110-184)||(42293453-42293527)
chr4 (200-253)||(43070053-43070107)
chr4 (199-268)||(44667530-44667600)
chr4 (213-267)||(44860779-44860833)
chr4 (111-184)||(20591505-20591578)
chr4 (119-184)||(35555860-35555925)
chr4 (185-253)||(51841465-51841534)
chr4 (119-183)||(4440858-4440922)
chr4 (209-261)||(18966484-18966536)
chr4 (199-266)||(25967555-25967623)
chr4 (137-181)||(26356626-26356670)
chr4 (119-183)||(38570960-38571024)
chr4 (120-184)||(39100749-39100813)
chr4 (209-249)||(42618817-42618857)
chr4 (209-253)||(44360022-44360066)
chr4 (88-184)||(49738786-49738882)
[»] chr3 (48 HSPs)
chr3 (61-268)||(42510171-42510369)
chr3 (74-249)||(39600849-39601020)
chr3 (80-260)||(36820135-36820309)
chr3 (79-253)||(19736935-19737106)
chr3 (79-253)||(19757838-19758009)
chr3 (75-250)||(45289260-45289434)
chr3 (65-184)||(41842670-41842789)
chr3 (105-259)||(49503753-49503903)
chr3 (119-280)||(52138711-52138869)
chr3 (119-268)||(49841535-49841688)
chr3 (61-253)||(344866-345054)
chr3 (136-253)||(31337756-31337867)
chr3 (119-280)||(47233809-47233967)
chr3 (119-268)||(54128302-54128447)
chr3 (119-184)||(50960846-50960911)
chr3 (199-280)||(50621648-50621731)
chr3 (120-280)||(51447924-51448080)
chr3 (199-268)||(38054625-38054695)
chr3 (200-268)||(2341003-2341072)
chr3 (63-148)||(30572956-30573040)
chr3 (104-172)||(39235154-39235222)
chr3 (18-174)||(21200562-21200724)
chr3 (137-184)||(26490319-26490366)
chr3 (105-184)||(27917574-27917653)
chr3 (122-268)||(28245361-28245503)
chr3 (119-280)||(54278931-54279089)
chr3 (88-174)||(42026718-42026804)
chr3 (211-261)||(46431972-46432022)
chr3 (58-174)||(46140446-46140562)
chr3 (118-181)||(3987054-3987117)
chr3 (210-280)||(33272328-33272399)
chr3 (93-172)||(44443391-44443470)
chr3 (210-261)||(45236787-45236838)
chr3 (210-280)||(45728057-45728128)
chr3 (199-280)||(46568027-46568110)
chr3 (140-253)||(50249320-50249432)
chr3 (119-268)||(21997-22141)
chr3 (209-267)||(11663574-11663632)
chr3 (120-174)||(48734349-48734403)
chr3 (119-184)||(5168836-5168901)
chr3 (119-172)||(11581460-11581513)
chr3 (218-267)||(19676398-19676447)
chr3 (137-182)||(26388487-26388532)
chr3 (119-184)||(35033150-35033215)
chr3 (119-184)||(38060435-38060500)
chr3 (123-184)||(38430852-38430913)
chr3 (137-174)||(44134061-44134098)
chr3 (118-174)||(33272234-33272290)
[»] chr1 (66 HSPs)
chr1 (61-184)||(48431561-48431684)
chr1 (61-247)||(35828705-35828887)
chr1 (104-261)||(43423648-43423803)
chr1 (74-184)||(2544603-2544713)
chr1 (104-184)||(36340001-36340081)
chr1 (119-280)||(1210656-1210814)
chr1 (110-241)||(1661377-1661508)
chr1 (119-280)||(15085845-15086003)
chr1 (119-280)||(30202343-30202501)
chr1 (17-184)||(40416375-40416548)
chr1 (119-183)||(13827930-13827994)
chr1 (93-181)||(32404713-32404801)
chr1 (119-280)||(696180-696338)
chr1 (199-261)||(40920825-40920888)
chr1 (61-171)||(8796226-8796336)
chr1 (119-268)||(9509242-9509387)
chr1 (119-268)||(49347606-49347751)
chr1 (119-268)||(51440978-51441123)
chr1 (209-262)||(16273119-16273172)
chr1 (61-184)||(5338728-5338851)
chr1 (119-280)||(8391683-8391841)
chr1 (119-280)||(9592645-9592803)
chr1 (61-180)||(13827725-13827844)
chr1 (61-172)||(14225984-14226095)
chr1 (187-280)||(40419550-40419645)
chr1 (199-268)||(4379929-4379999)
chr1 (139-268)||(9599627-9599752)
chr1 (211-261)||(35672619-35672669)
chr1 (210-267)||(16822319-16822376)
chr1 (77-161)||(9002379-9002463)
chr1 (120-172)||(41611822-41611874)
chr1 (85-173)||(52837540-52837628)
chr1 (120-261)||(8671851-8671986)
chr1 (93-172)||(46388392-46388471)
chr1 (93-179)||(990646-990732)
chr1 (119-268)||(4001668-4001813)
chr1 (122-180)||(7921843-7921901)
chr1 (210-268)||(19936446-19936504)
chr1 (61-250)||(27703951-27704135)
chr1 (137-277)||(32082976-32083113)
chr1 (111-268)||(32231159-32231312)
chr1 (119-268)||(34792562-34792707)
chr1 (119-244)||(39140468-39140589)
chr1 (119-184)||(51602060-51602125)
chr1 (187-267)||(52442780-52442861)
chr1 (61-133)||(43375742-43375814)
chr1 (209-268)||(52633471-52633530)
chr1 (200-261)||(4590813-4590875)
chr1 (104-170)||(17815490-17815556)
chr1 (61-171)||(26016454-26016564)
chr1 (209-267)||(39422340-39422398)
chr1 (104-174)||(51812539-51812609)
chr1 (212-261)||(6641063-6641112)
chr1 (93-174)||(17275210-17275291)
chr1 (211-268)||(34827403-34827460)
chr1 (137-185)||(2500067-2500115)
chr1 (88-184)||(3819038-3819134)
chr1 (120-184)||(4380017-4380081)
chr1 (212-264)||(4781305-4781357)
chr1 (236-264)||(12230955-12230983)
chr1 (77-161)||(16272992-16273076)
chr1 (145-268)||(16943099-16943218)
chr1 (212-268)||(17143179-17143235)
chr1 (232-268)||(26016361-26016397)
chr1 (199-246)||(33561077-33561125)
chr1 (138-245)||(52561843-52561946)
[»] chr5 (58 HSPs)
chr5 (59-184)||(43475244-43475369)
chr5 (117-253)||(6888932-6889064)
chr5 (61-181)||(7359415-7359534)
chr5 (61-168)||(21093772-21093879)
chr5 (187-268)||(28186944-28187026)
chr5 (61-180)||(79521-79640)
chr5 (93-270)||(10082926-10083098)
chr5 (137-253)||(14667696-14667814)
chr5 (119-280)||(2075687-2075845)
chr5 (200-262)||(9234999-9235062)
chr5 (199-251)||(683980-684033)
chr5 (119-280)||(16347591-16347749)
chr5 (121-268)||(21952275-21952424)
chr5 (120-268)||(1275189-1275332)
chr5 (199-268)||(11002709-11002779)
chr5 (74-268)||(41109908-41110099)
chr5 (88-174)||(42199300-42199386)
chr5 (119-184)||(20456777-20456842)
chr5 (136-184)||(27897-27945)
chr5 (199-261)||(5305547-5305610)
chr5 (209-268)||(7678404-7678463)
chr5 (201-267)||(21093701-21093768)
chr5 (119-280)||(24178421-24178579)
chr5 (209-267)||(6368224-6368282)
chr5 (119-184)||(1287792-1287857)
chr5 (104-249)||(4026533-4026673)
chr5 (119-184)||(4496388-4496453)
chr5 (61-158)||(15986892-15986989)
chr5 (91-172)||(18131921-18132002)
chr5 (119-184)||(28676599-28676664)
chr5 (119-184)||(28977072-28977137)
chr5 (119-184)||(31636133-31636198)
chr5 (138-253)||(32516497-32516606)
chr5 (119-184)||(33667220-33667285)
chr5 (119-184)||(38684971-38685036)
chr5 (91-172)||(43522623-43522704)
chr5 (185-268)||(219727-219811)
chr5 (211-267)||(16134480-16134536)
chr5 (104-184)||(27249224-27249304)
chr5 (210-280)||(1287889-1287960)
chr5 (137-184)||(15168796-15168843)
chr5 (137-172)||(30588465-30588500)
chr5 (93-184)||(37124571-37124662)
chr5 (62-184)||(2712948-2713070)
chr5 (235-280)||(5848401-5848447)
chr5 (122-184)||(25937973-25938035)
chr5 (119-169)||(27998478-27998528)
chr5 (138-172)||(29938131-29938165)
chr5 (200-261)||(30588384-30588446)
chr5 (119-184)||(3301848-3301913)
chr5 (60-184)||(18351061-18351186)
chr5 (232-280)||(34272933-34272982)
chr5 (119-184)||(34273031-34273096)
chr5 (111-172)||(43558032-43558093)
chr5 (88-148)||(9235104-9235164)
chr5 (61-173)||(15489647-15489759)
chr5 (232-268)||(27998347-27998383)
chr5 (232-268)||(43558136-43558172)
[»] chr6 (33 HSPs)
chr6 (119-267)||(33083983-33084127)
chr6 (30-268)||(9593826-9594070)
chr6 (150-268)||(12134145-12134259)
chr6 (93-244)||(2079288-2079435)
chr6 (119-280)||(5258361-5258521)
chr6 (119-280)||(28085287-28085445)
chr6 (199-261)||(33998292-33998355)
chr6 (62-184)||(14389324-14389445)
chr6 (212-280)||(31818449-31818518)
chr6 (61-180)||(24665818-24665938)
chr6 (210-261)||(7513283-7513334)
chr6 (59-180)||(6293539-6293660)
chr6 (137-280)||(9706687-9706827)
chr6 (104-172)||(43250-43318)
chr6 (210-280)||(608070-608141)
chr6 (209-248)||(8364520-8364559)
chr6 (119-280)||(20427849-20428007)
chr6 (199-268)||(5129125-5129195)
chr6 (88-182)||(6907009-6907103)
chr6 (220-262)||(7150628-7150670)
chr6 (61-146)||(579460-579545)
chr6 (119-278)||(30031169-30031325)
chr6 (210-280)||(10100157-10100228)
chr6 (111-181)||(26291788-26291856)
chr6 (232-280)||(4948629-4948678)
chr6 (232-280)||(4955600-4955649)
chr6 (137-174)||(5897483-5897520)
chr6 (209-258)||(10617525-10617574)
chr6 (91-172)||(18905894-18905974)
chr6 (110-171)||(29020111-29020171)
chr6 (209-261)||(9568591-9568643)
chr6 (61-173)||(9749379-9749491)
chr6 (65-133)||(30718922-30718990)
[»] scaffold0018 (3 HSPs)
scaffold0018 (61-184)||(44023-44146)
scaffold0018 (119-261)||(31399-31537)
scaffold0018 (209-268)||(44170-44229)
[»] scaffold0570 (1 HSPs)
scaffold0570 (119-184)||(1161-1226)
[»] scaffold0157 (1 HSPs)
scaffold0157 (145-253)||(25684-25788)


Alignment Details
Target: chr8 (Bit Score: 236; Significance: 1e-130; HSPs: 55)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 18 - 321
Target Start/End: Original strand, 2518504 - 2518801
Alignment:
Q  18 tagatcttgctcaatagtttgtcttataatttttcaaggaattcctctagtgatcagactatcctcaatttgatatactctctttcctacaaaatctata 117  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |    
T  2518504 tagatcttgctcaatagtttgtcttataatttttcaaggacttcctctagtgttcagactatcctcaatttgatatactctctttcctacaaaatctaca 2518603  T
Q  118 agtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgctatgctaccccaattttctctctaatttgtcattt 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||     |||||||||||||||||||||||||||||||||    
T  2518604 agtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctacttgagg-----tgctaccccaattttctctctaatttgtcattt 2518698  T
Q  218 ctaatcctatctcatctagtcttaccacacatccaatgcaacattctcatcccgctacacttannnnnnnnnctcatattggttcttcactgcccaactc 317  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         ||||||||||||||||||||||||||||    
T  2518699 ctaatcctatctcatctagtcttaccacacatccaatgcaacattctcatcccgctacactta-ttttttttctcatattggttcttcactgcccaactc 2518797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 64 - 261
Target Start/End: Original strand, 10824322 - 10824511
Alignment:
Q  64 ctagtgatcagactatcctcaatttgatatactctctttcctacaaaatctataagtcttctctctacataatcaaaccacctaaacctattttccacca 163  Q
    |||| |||| |||||||||| ||||||| |||||||  | ||||||||||||| |||||| |||||| |||  |||||||||||| ||||||||| ||||    
T  10824322 ctagcgatctgactatcctccatttgatctactctccatactacaaaatctatgagtcttttctctaaatacccaaaccacctaagcctattttcgacca 10824421  T
Q  164 tcttttctactttaggtgctatgctaccccaattttctctctaat-ttgtcatttctaatcctatctcatctagtcttaccacacatccaatgcaacat 261  Q
    ||||||||||||||||     |||| || |||    ||||||||| || | |||||||||| |||| |||||||||||||||||| |||||||||||||    
T  10824422 tcttttctactttagg-----tgctgcctcaa----ctctctaatatttttatttctaatcatatcccatctagtcttaccacacgtccaatgcaacat 10824511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 137 - 268
Target Start/End: Original strand, 13171880 - 13172007
Alignment:
Q  137 caaaccacctaaacctattttccaccatcttttctactttaggtgctatgctaccccaattttctctctaat-ttgtcatttctaatcctatctcatcta 235  Q
    |||||||||||| | ||||||||||||||||||||||| ||||||||      |||||| | |||||||||| |||||||||||||||||||| | ||||    
T  13171880 caaaccacctaagcatattttccaccatcttttctactataggtgctt-----ccccaactctctctctaatcttgtcatttctaatcctatcccgtcta 13171974  T
Q  236 gtcttaccacacatccaatgcaacattctcatc 268  Q
    ||||||| |||||||||||||||||||||||||    
T  13171975 gtcttactacacatccaatgcaacattctcatc 13172007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 69 - 184
Target Start/End: Complemental strand, 44373895 - 44373780
Alignment:
Q  69 gatcagactatcctcaatttgatatactctctttcctacaaaatctataagtcttctctctacataatcaaaccacctaaacctattttccaccatcttt 168  Q
    |||| |||||||||| ||||||| |||||||||| |||||||||||||| |||||  ||||||||  |||||||||  || |||||||||||||||||||    
T  44373895 gatctgactatcctctatttgatctactctctttactacaaaatctataggtctttactctacatgctcaaaccactcaagcctattttccaccatcttt 44373796  T
Q  169 tctactttaggtgcta 184  Q
    ||||||||||||||||    
T  44373795 tctactttaggtgcta 44373780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 61 - 258
Target Start/End: Original strand, 44681194 - 44681387
Alignment:
Q  61 cctctagtgatcagactatcctcaatttgatatactctctttcctacaaaatctataagtcttctctctacataatcaaaccacctaaacctattttcca 160  Q
    |||||||||||  |||| || || || |||| ||||||| || || || |||||||| |||||||||||| ||   ||||||  |||| | |||||||||    
T  44681194 cctctagtgatatgactgtcatctatctgatctactctcattgctgcagaatctataggtcttctctctagatttccaaaccttctaagcttattttcca 44681293  T
Q  161 ccatcttttctactttaggtgctatgctaccccaattttctctctaat-ttgtcatttctaatcctatctcatctagtcttaccacacatccaatgcaa 258  Q
    |||||||||||| | |||||||||     || ||| | |||||||||| ||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  44681294 ccatcttttctattataggtgcta-----ccacaactgtctctctaatgttgtcatttctaatcttatctcgtctagtcttaccacacatccaatgcaa 44681387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 61 - 268
Target Start/End: Original strand, 41971933 - 41972132
Alignment:
Q  61 cctctagtgatcagactatcctcaatttgatatactctctttcctacaaaatctataagtcttctctctacataatcaaaccacctaaacctattttcca 160  Q
    |||||||||||  ||||||| || |  |||| ||||||| || ||| |||||||| | |||||||||||||||   |||||||||||||| |||||||||    
T  41971933 cctctagtgatttgactatcgtccacctgatctactctccttgctagaaaatctacacgtcttctctctacatgtccaaaccacctaaacttattttcca 41972032  T
Q  161 ccatcttttctactttaggtgctatgctaccccaattttctctctaat-ttgtcatttctaatcctatctcatctagtcttaccacacatccaatgcaac 259  Q
    ||||||||||||| ||||||| ||  ||| |       |||||||||| || ||||||||||| ||||||||| || ||||| |||||||||||| ||||    
T  41972033 ccatcttttctac-ttaggtgttaccctaac-------tctctctaatattctcatttctaattctatctcat-taatcttatcacacatccaatacaac 41972123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 61 - 268
Target Start/End: Complemental strand, 36143492 - 36143293
Alignment:
Q  61 cctctagtgatcagactatcctcaatttgatatactctctttcctacaaaatctataagtcttctctctacataatcaaaccacctaaacctattttcca 160  Q
    ||||||| |||| |||||||||| ||||||| |||||||  | ||||| |||||||| ||||| |||||| ||   ||||||||||||  ||||||||||    
T  36143492 cctctagcgatctgactatcctccatttgatctactctccatactacagaatctataggtcttttctctaaatgcccaaaccacctaagtctattttcca 36143393  T
Q  161 ccatcttttctactttaggtgctatgctaccccaattttctctctaat-ttgtcatttctaatcctatctcatctagtcttaccacacatccaatgcaac 259  Q
    |||||| |||| || ||||     ||||||| | |    ||||||||| || || |||||||||||||||||||||||||||||||||  ||||  ||||    
T  36143392 ccatctattctgctatagg-----tgctacctcga----ctctctaatcttttcctttctaatcctatctcatctagtcttaccacacgaccaacacaac 36143302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 65 - 268
Target Start/End: Complemental strand, 16917306 - 16917108
Alignment:
Q  65 tagtgatcagactatcctcaatttgatatactctctttcctacaaaatctataagtcttctctctacataatcaaaccacctaaacctattttccaccat 164  Q
    |||||||  ||||||||||||| |||| ||||||| || ||||||| |||| ||| ||||||| |||||   |||||||||||| |||| ||| ||||||    
T  16917306 tagtgatttgactatcctcaatctgatctactctccttactacaaa-tctacaagccttctctttacatgcccaaaccacctaagcctagtttgcaccat 16917208  T
Q  165 cttttctactttaggtgctatgctaccccaattttctctctaat-ttgtcatttctaatcctatctcatctagtcttaccacacatccaatgcaacattc 263  Q
    |||||||||||| ||     | ||||||||| ||| || ||||| ||||||||| ||||||||||    | |||||||||||| |  ||| |||||||||    
T  16917207 cttttctactttcgg-----tactaccccaactttatcactaatgttgtcatttttaatcctatccagccgagtcttaccacaaagtcaacgcaacattc 16917113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 119 - 280
Target Start/End: Original strand, 8879653 - 8879811
Alignment:
Q  119 gtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgctatgctaccccaattttctctctaatt-tgtcattt 217  Q
    ||||||||||||||||  |||| || ||||  |||||||| |||| |||||||||| ||||||||      |||| ||| ||||||||||| |||||||     
T  8879653 gtcttctctctacatacccaaatcatctaagtctattttctaccaacttttctactataggtgctt-----cccccattctctctctaattgtgtcattc 8879747  T
Q  218 ctaatcctatctcatctagtcttaccacacatccaatgcaacattctcatc-ccgctacactta 280  Q
    ||||||||||||  || |||||||||||  ||| | ||||||||||||||| ||||||||||||    
T  8879748 ctaatcctatctagtccagtcttaccacttatcaagtgcaacattctcatctccgctacactta 8879811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 61 - 268
Target Start/End: Complemental strand, 29520777 - 29520584
Alignment:
Q  61 cctctagtgatcagactatcctcaatttgatatactctctttcctacaaaatctataagtcttctctctacataatcaaaccacctaaacctattttcca 160  Q
    ||||| |||||  |||||||||| || |||| ||||||| || |||||||||||| |||||||||||||||||   |||||||           ||||||    
T  29520777 cctcttgtgatttgactatcctccatctgatctactctccttactacaaaatctacaagtcttctctctacatgcccaaacca-----------tttcca 29520689  T
Q  161 ccatct-tttctactttaggtgctatgctaccccaattttctctctaatt-tgtcatttctaatcctatctcatctagtcttaccacacatccaatgcaa 258  Q
    |||| | |||||||| |||     |||| ||||||| | ||||||||||  | ||||||||||||||||| |||||||||||||||||||||||| ||||    
T  29520688 ccatttatttctactatag-----atgccaccccaactctctctctaatggtatcatttctaatcctatcccatctagtcttaccacacatccaacgcaa 29520594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 119 - 260
Target Start/End: Complemental strand, 32043659 - 32043522
Alignment:
Q  119 gtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgctatgctaccccaattttctctctaat-ttgtcattt 217  Q
    |||||||||||||||   ||||||||| ||  ||| |||| |||||||||| |||| |||||| ||     |||||| | |||||||||| |||||||||    
T  32043659 gtcttctctctacatggccaaaccaccaaagtctagtttctaccatcttttgtactataggtgata-----ccccaactctctctctaatgttgtcattt 32043565  T
Q  218 ctaatcctatctcatctagtcttaccacacatccaatgcaaca 260  Q
    ||||| ||||| | |||||||||||||||||||||| ||||||    
T  32043564 ctaattctatcccgtctagtcttaccacacatccaacgcaaca 32043522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 61 - 267
Target Start/End: Complemental strand, 33511482 - 33511285
Alignment:
Q  61 cctctagtgatcagactatcctcaatttgatatactctctttcctacaaaatctataagtcttctctctacataatcaaaccacctaaacctattttcca 160  Q
    ||||| |||||| |||||||  ||||| ||| |||||||||  ||||| |||||||| |||||||||||  ||| |||||||||||||  ||||||| ||    
T  33511482 cctctggtgatctgactatctccaatt-gatctactctcttaactacagaatctataggtcttctctctgtatactcaaaccacctaagtctatttttca 33511384  T
Q  161 ccatcttttctactttaggtgctatgctaccccaattttctctctaat-ttgtcatttctaatcctatctcatctagtcttaccacacatccaatgcaac 259  Q
     ||| ||||||||  ||||     || ||||||||    ||||||||| || |||||||||||| |||||||| ||||||||||||||||| |  |||||    
T  33511383 tcattttttctaccatagg-----tgttaccccaa----ctctctaatattttcatttctaatcatatctcatatagtcttaccacacatcaagcgcaac 33511293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 85 - 261
Target Start/End: Original strand, 10080086 - 10080256
Alignment:
Q  85 atttgatatactctctttcctacaaaatctataagtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgcta 184  Q
    ||||||| ||||||| || ||||||||||   | |||||||||||||||   ||||||| | |  |||| ||||||||||||||||||||| ||     |    
T  10080086 atttgatctactctccttactacaaaatcctcaggtcttctctctacatgcccaaaccatc-aggcctagtttccaccatcttttctactt-ag-----a 10080178  T
Q  185 tgctaccccaattttctctctaat-ttgtcatttctaatcctatctcatctagtcttaccacacatccaatgcaacat 261  Q
    ||||||| ||| | |||||||||| ||||||||||||||| |||||| ||||||||||||| ||| |||| |||||||    
T  10080179 tgctacctcaactctctctctaatgttgtcatttctaatcttatctcgtctagtcttaccaaacacccaacgcaacat 10080256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 120 - 253
Target Start/End: Original strand, 15853691 - 15853823
Alignment:
Q  120 tcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgctatgctaccccaattttctctctaatttgtcatttct 219  Q
    ||||||||||||| |   |||||||||||||| ||||| ||| |||||||||||| ||||||||   | ||||||| | | |||||||||| ||||||||    
T  15853691 tcttctctctacacaccaaaaccacctaaacccatttttcacgatcttttctactataggtgct-gcccaccccaactctatctctaatttttcatttct 15853789  T
Q  220 aatcctatctcatctagtcttaccacacatccaa 253  Q
    |||| |||||||| |  ||||| |||||||||||    
T  15853790 aatcttatctcatatcttcttatcacacatccaa 15853823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 93 - 184
Target Start/End: Complemental strand, 12611630 - 12611539
Alignment:
Q  93 tactctctttcctacaaaatctataagtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgcta 184  Q
    |||||||||| ||| | |||| | | || |||| ||||||||  |||||||||||| |||| ||||||||||||||||||||||||||||||    
T  12611630 tactctctttactatataatccacaggtgttctgtctacatacgcaaaccacctaagcctagtttccaccatcttttctactttaggtgcta 12611539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 119 - 268
Target Start/End: Original strand, 36395162 - 36395308
Alignment:
Q  119 gtcttctctctacataatcaaaccacctaaa-cctattttccaccatcttttctactttaggtgctatgctaccccaattttctctctaatt-tgtcatt 216  Q
    |||||||||||||||   ||||||| ||||| ||||||||| |||| |||||||||| |||||||||     |||| | | ||||||||||  |||||||    
T  36395162 gtcttctctctacatgcccaaaccatctaaagcctattttctaccaacttttctactataggtgcta-----cccccactctctctctaatggtgtcatt 36395256  T
Q  217 tctaatcctatctcatctagtcttaccacacatccaatgcaacattctcatc 268  Q
     |||||||||||   |||||||||||||| ||||||| ||||||| ||||||    
T  36395257 cctaatcctatcctgtctagtcttaccactcatccaacgcaacatcctcatc 36395308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 210 - 280
Target Start/End: Original strand, 6510726 - 6510796
Alignment:
Q  210 tgtcatttctaatcctatctcatctagtcttaccacacatccaatgcaacattctcatcccgctacactta 280  Q
    |||||||||||||| |||||||||||||||||||||  ||||||  ||||||  |||||||||||||||||    
T  6510726 tgtcatttctaatcatatctcatctagtcttaccacttatccaacacaacatcatcatcccgctacactta 6510796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 104 - 181
Target Start/End: Complemental strand, 29645121 - 29645044
Alignment:
Q  104 ctacaaaatctataagtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtg 181  Q
    |||||||||||||| ||||||||| |||||   |||||||  |||||||||||||||||||||||| |||| ||||||    
T  29645121 ctacaaaatctataggtcttctctttacatgtccaaaccaattaaacctattttccaccatcttttatactataggtg 29645044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 93 - 228
Target Start/End: Complemental strand, 9695726 - 9695595
Alignment:
Q  93 tactctctttcctacaaaatctataagtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgctatgctaccc 192  Q
    |||||||||| || || |||||| | | |||||||||||||   |||||||||||| || | |||||||||||||||||||| ||||     ||||||||    
T  9695726 tactctctttacttcagaatctacaggacttctctctacatgcccaaaccacctaagccgagtttccaccatcttttctactatagg-----tgctaccc 9695632  T
Q  193 caattttctctctaat-ttgtcatttctaatcctatc 228  Q
    ||| | ||||| |||| |||||||||||||| |||||    
T  9695631 caaatatctctataatgttgtcatttctaattctatc 9695595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 62 - 229
Target Start/End: Complemental strand, 11733873 - 11733710
Alignment:
Q  62 ctctagtgatcagactatcctcaatttgatatactctctttcctacaaaatctataagtcttctctctacataatcaaaccacctaaacctattttccac 161  Q
    ||||||||||| |||||||||| |  |||| ||||||| || |||||| ||||| || ||||||||| |||  |||||||||| |||  ||| |||||||    
T  11733873 ctctagtgatctgactatcctccacgtgatctactctccttactacaacatctacaaatcttctctcaacaagatcaaaccacttaactctagtttccac 11733774  T
Q  162 catcttttctactttaggtgctatgctaccccaattttctctctaat-ttgtcatttctaatcctatct 229  Q
    ||||| |||||   |||||| |||     ||||| | | |||||||| |||||||||||||||||||||    
T  11733773 catctattctatcataggtgttat-----cccaactctttctctaatgttgtcatttctaatcctatct 11733710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 122 - 280
Target Start/End: Original strand, 36565457 - 36565612
Alignment:
Q  122 ttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgctatgctaccccaattttctctctaatt-tgtcatttcta 220  Q
    ||||||||||||   ||||||| |||| ||||||||| |||| |||||||||| |||||||||     |||| | | ||||||||||  ||||||| |||    
T  36565457 ttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgcta-----cccccactctctctctaatggtgtcattccta 36565551  T
Q  221 atcctatctcatctagtcttaccacacatccaatgcaacattctcatc-ccgctacactta 280  Q
    ||||||||   |||||||||||||| ||||||| ||| ||| |||||| | ||||||||||    
T  36565552 atcctatcctgtctagtcttaccactcatccaacgcatcatcctcatctctgctacactta 36565612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 209 - 268
Target Start/End: Original strand, 28300411 - 28300470
Alignment:
Q  209 ttgtcatttctaatcctatctcatctagtcttaccacacatccaatgcaacattctcatc 268  Q
    ||||||||||||||| |||||||||||||||||| ||||||||||  |||||| ||||||    
T  28300411 ttgtcatttctaatcttatctcatctagtcttactacacatccaacacaacatcctcatc 28300470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 137 - 184
Target Start/End: Original strand, 41444557 - 41444604
Alignment:
Q  137 caaaccacctaaacctattttccaccatcttttctactttaggtgcta 184  Q
    ||||||||||||||||| |||||||||||||||||||| |||||||||    
T  41444557 caaaccacctaaacctagtttccaccatcttttctactataggtgcta 41444604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 119 - 252
Target Start/End: Original strand, 18474173 - 18474298
Alignment:
Q  119 gtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgctatgctaccccaattttctctctaat-ttgtcattt 217  Q
    |||||||||||||||  |||||||| |||| |||| ||||||||||| |||||||| |||||||||  |||          ||||||||| |||||||||    
T  18474173 gtcttctctctacatgctcaaaccaactaagcctagtttccaccatcatttctactataggtgctactcta---------actctctaatattgtcattt 18474263  T
Q  218 ctaatcctatctcatctagtcttaccacacatcca 252  Q
    ||| | ||||| ||||||| |||||||||||||||    
T  18474264 ctatttctatcacatctagccttaccacacatcca 18474298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 119 - 173
Target Start/End: Complemental strand, 23023312 - 23023258
Alignment:
Q  119 gtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctac 173  Q
    ||||||||||||||||||||||| |||||| |||| ||||| |||||||||||||    
T  23023312 gtcttctctctacataatcaaactacctaagcctagtttcccccatcttttctac 23023258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 62 - 164
Target Start/End: Complemental strand, 30559819 - 30559717
Alignment:
Q  62 ctctagtgatcagactatcctcaatttgatatactctctttcctacaaaatctataagtcttctctctacataatcaaaccacctaaacctattttccac 161  Q
    ||||||||||| |||||||||| || ||||  ||| || || |||||||||||| | |||||||||||| ||   |||||||||||| ||||||||| ||    
T  30559819 ctctagtgatccgactatcctccatctgatccactgtccttactacaaaatctacatgtcttctctctaaatgcccaaaccacctaagcctattttcgac 30559720  T
Q  162 cat 164  Q
    |||    
T  30559719 cat 30559717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 199 - 267
Target Start/End: Complemental strand, 16252929 - 16252860
Alignment:
Q  199 tctctctaat-ttgtcatttctaatcctatctcatctagtcttaccacacatccaatgcaacattctcat 267  Q
    |||||||||| ||||||||||||||  ||||||||||| |||||||||||||||||  |||||| |||||    
T  16252929 tctctctaatgttgtcatttctaattttatctcatctaatcttaccacacatccaacacaacatcctcat 16252860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 119 - 184
Target Start/End: Complemental strand, 18125242 - 18125177
Alignment:
Q  119 gtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgcta 184  Q
    |||||||||||||||  |||||||| |||| ||||||||| |||| |||||||||| |||||||||    
T  18125242 gtcttctctctacatgttcaaaccatctaagcctattttctaccaacttttctactataggtgcta 18125177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 120 - 184
Target Start/End: Complemental strand, 40813392 - 40813328
Alignment:
Q  120 tcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgcta 184  Q
    ||||||||||||||   ||||||| |||||||||||||| |||| |||||||||| |||||||||    
T  40813392 tcttctctctacatgcccaaaccatctaaacctattttctaccaacttttctactataggtgcta 40813328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 119 - 261
Target Start/End: Complemental strand, 45419306 - 45419170
Alignment:
Q  119 gtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgctatgctaccccaattttctctctaatt-tgtcattt 217  Q
    ||||| |||||||||   ||||||||||||  |||||||  ||||||||||||||| |||||||||     ||||||||  |||||||||  |||||||     
T  45419306 gtcttatctctacatgcccaaaccacctaagtctattttataccatcttttctactataggtgcta-----ccccaatt--ctctctaatggtgtcattc 45419214  T
Q  218 ctaatcctatctcatctagtcttaccacacatccaatgcaacat 261  Q
    |||||| |||| | ||||||||||||||  |||||| |||||||    
T  45419213 ctaatcttatcccttctagtcttaccactaatccaacgcaacat 45419170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 199 - 253
Target Start/End: Complemental strand, 16705756 - 16705701
Alignment:
Q  199 tctctctaat-ttgtcatttctaatcctatctcatctagtcttaccacacatccaa 253  Q
    |||||||||| |||||||||||||| ||||| ||||||||||||||||||| ||||    
T  16705756 tctctctaatgttgtcatttctaattctatcccatctagtcttaccacacaaccaa 16705701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 95 - 174
Target Start/End: Original strand, 17491810 - 17491889
Alignment:
Q  95 ctctctttcctacaaaatctataagtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctact 174  Q
    ||||| || ||||||||| |||| ||||||||||||||||  ||||||||||||   |||| |||||||| |||||||||    
T  17491810 ctctccttactacaaaatgtataggtcttctctctacatacccaaaccacctaagtttattgtccaccatattttctact 17491889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 119 - 174
Target Start/End: Original strand, 35643814 - 35643869
Alignment:
Q  119 gtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctact 174  Q
    |||||||||||||||   |||||||||||| | |||||||||||||||||||||||    
T  35643814 gtcttctctctacatgcccaaaccacctaagcatattttccaccatcttttctact 35643869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 119 - 280
Target Start/End: Complemental strand, 36545218 - 36545058
Alignment:
Q  119 gtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgctatgctaccccaat-tttctctctaat-ttgtcatt 216  Q
    |||||||||||||||   ||||||| |||| ||||||||| |||| |||||||||| |||||| ||     ||||| | | ||||||||||  |||||||    
T  36545218 gtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgtta----cccccactctctctctctaatggtgtcatt 36545123  T
Q  217 tctaatcctatctcatctagtcttaccacacatccaatgcaacattctcatc-ccgctacactta 280  Q
     |||||||||||   |||||||||||||| |||||||  |||||| |||||| | ||||||||||    
T  36545122 cctaatcctatcatgtctagtcttaccactcatccaacacaacatcctcatctctgctacactta 36545058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 74 - 243
Target Start/End: Original strand, 43904833 - 43905000
Alignment:
Q  74 gactatcctcaatttgatatactctctttcctacaaaatctataagtcttctctctacataatcaaaccacctaaac---ctattttccaccatcttttc 170  Q
    |||||||||| || |||| || |||  || |||||| ||||||| |||||||||||||||   |||||||||||| |    |||||||| ||||||||||    
T  43904833 gactatcctccatctgatctattcttcttactacaacatctataggtcttctctctacatgtccaaaccacctaagcttattattttcctccatcttttc 43904932  T
Q  171 tactttaggtgctatgctaccccaattttctctctaat-ttgtcatttctaatcctatctcatctagtcttacc 243  Q
    |||| |||     ||||||| |||| |  ||||||||| ||||||||| | ||||||| |||||||||||||||    
T  43904933 tactatag-----atgctacgccaa-tacctctctaatgttgtcattttttatcctatttcatctagtcttacc 43905000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 137 - 268
Target Start/End: Original strand, 45512726 - 45512854
Alignment:
Q  137 caaaccacctaaacctattttccaccatcttttctactttaggtgctatgctaccccaattttctctct--aat-ttgtcatttctaatcctatctcatc 233  Q
    ||||||| |||| | ||||||||| ||||||||||||| |||||||||     |||||| |  ||||||  ||| || |||||||||| |||| || |||    
T  45512726 caaaccatctaagcttattttccatcatcttttctactataggtgcta-----ccccaactccctctctttaatattttcatttctaaccctacct-atc 45512819  T
Q  234 tagtcttaccacacatccaatgcaacattctcatc 268  Q
    |||||||||||||||||||| | ||||||||||||    
T  45512820 tagtcttaccacacatccaacgaaacattctcatc 45512854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 61 - 239
Target Start/End: Complemental strand, 29700403 - 29700233
Alignment:
Q  61 cctctagtgatcagactatcctcaatttgatatactctctttcctacaaaatctataagtcttctctctacataatcaaaccacctaaacctattttcca 160  Q
    |||||||||||  |||||||||| || | || ||||||| || ||||| |||| |   ||||| |||||| ||   |||||||||||| || | |||||     
T  29700403 cctctagtgatatgactatcctccatctaatctactctccttactacagaatccaatggtcttttctctatatgcccaaaccacctaagccaactttcct 29700304  T
Q  161 ccatcttttctactttaggtgctatgctaccccaattttctctctaa-tttgtcatttctaatcctatctcatctagtct 239  Q
    |||||||||||||| ||||     |||||||||||    ||||||||  || ||||||||||||||||||||||||||||    
T  29700303 ccatcttttctactatagg-----tgctaccccaa----ctctctaacattttcatttctaatcctatctcatctagtct 29700233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 142 - 253
Target Start/End: Complemental strand, 7103316 - 7103201
Alignment:
Q  142 cacctaaacctattttccaccatcttttctactttaggtgctatgc---taccccaattttctctctaat-ttgtcatttctaatcctatctcatctagt 237  Q
    ||||||| |||| |||| ||||||||||||||| |||||||||  |   |||||  | | | |||||||| ||||||||| |||||||||||||||||||    
T  7103316 cacctaagcctagtttctaccatcttttctactataggtgctaaccgtctaccctgactctatctctaatgttgtcatttataatcctatctcatctagt 7103217  T
Q  238 cttaccacacatccaa 253  Q
     ||||  |||||||||    
T  7103216 tttacagcacatccaa 7103201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 119 - 184
Target Start/End: Original strand, 12491351 - 12491416
Alignment:
Q  119 gtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgcta 184  Q
    |||||||||||||||   ||||||| |||| ||||||||| |||| |||||||||| |||||||||    
T  12491351 gtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgcta 12491416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 185 - 261
Target Start/End: Complemental strand, 16351398 - 16351321
Alignment:
Q  185 tgctaccccaattttctctctaat-ttgtcatttctaatcctatctcatctagtcttaccacacatccaatgcaacat 261  Q
    |||||||| |||| |||||||||| |||||||||||||  ||||  | ||||||||||||||| |||||| |||||||    
T  16351398 tgctaccctaattctctctctaatgttgtcatttctaactctattccgtctagtcttaccacatatccaacgcaacat 16351321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 253
Target Start/End: Complemental strand, 5908772 - 5908581
Alignment:
Q  62 ctctagtgatcagactatcctcaatttgatatactctctttcctacaaaatctataagtcttctctctacataatcaaaccacctaaacctattttcc-- 159  Q
    ||||||||||| ||| |||||| |  |||| ||||||| || |||||||||||| | |||||||||||  |||  ||||||| ||||  ||| |||||      
T  5908772 ctctagtgatctgaccatcctccacctgatctactctccttactacaaaatctacaggtcttctctct--atatccaaaccaactaagtctagtttccat 5908675  T
Q  160 ----accatcttttctactttaggtgctatgctaccccaattttctctctaat-ttgtcatttctaatcctatctcatctagtcttaccacacatccaa 253  Q
        ||||||||||||||| ||||     | ||||||||| | |||||||||| ||||||||||||||| |||| | |||||||||   ||||||||||    
T  5908674 ttcaaccatcttttctactatagg-----ttctaccccaactctctctctaatgttgtcatttctaatcttatcccgtctagtcttgaaacacatccaa 5908581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 280
Target Start/End: Original strand, 30783339 - 30783411
Alignment:
Q  209 ttgtcatttctaatcctatctcatctagtcttaccacacatccaatgcaacattctcatc-ccgctacactta 280  Q
    ||||||||||||||||||||  |||||||||| ||||| |||||| |||| || |||||| || |||||||||    
T  30783339 ttgtcatttctaatcctatcctatctagtcttgccacagatccaacgcaagatcctcatctccactacactta 30783411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 199 - 253
Target Start/End: Complemental strand, 36069637 - 36069582
Alignment:
Q  199 tctctctaat-ttgtcatttctaatcctatctcatctagtcttaccacacatccaa 253  Q
    |||||||||| ||||| ||||||||| |||| | ||||||||||||||||||||||    
T  36069637 tctctctaatgttgtcgtttctaatcttatcccgtctagtcttaccacacatccaa 36069582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 210 - 280
Target Start/End: Complemental strand, 37077747 - 37077676
Alignment:
Q  210 tgtcatttctaatcctatctcatctagtcttaccacacatccaatgcaacattctcatc-ccgctacactta 280  Q
    ||||||| ||||||||||||| |||||| ||||||| ||||||  ||||||| |||||| |||| |||||||    
T  37077747 tgtcattcctaatcctatctcgtctagttttaccactcatccagcgcaacatcctcatctccgccacactta 37077676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 209 - 268
Target Start/End: Complemental strand, 38667537 - 38667478
Alignment:
Q  209 ttgtcatttctaatcctatctcatctagtcttaccacacatccaatgcaacattctcatc 268  Q
    |||||||| |||||||||||||||||| | ||||||||| |||||  |||||||| ||||    
T  38667537 ttgtcattactaatcctatctcatctacttttaccacacgtccaacacaacattcccatc 38667478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 216 - 267
Target Start/End: Complemental strand, 43732543 - 43732492
Alignment:
Q  216 ttctaatcctatctcatctagtcttaccacacatccaatgcaacattctcat 267  Q
    ||||||| ||||| |||||||||||||||||||||||| | ||||| |||||    
T  43732543 ttctaattctatcacatctagtcttaccacacatccaacgtaacatcctcat 43732492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 119 - 173
Target Start/End: Original strand, 1549590 - 1549644
Alignment:
Q  119 gtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctac 173  Q
    |||||||||||||||  |||||| |||||| |||| ||||| |||||||||||||    
T  1549590 gtcttctctctacatgctcaaactacctaagcctagtttcccccatcttttctac 1549644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 268
Target Start/End: Original strand, 30456500 - 30456569
Alignment:
Q  199 tctctctaattt-gtcatttctaatcctatctcatctagtcttaccacacatccaatgcaacattctcatc 268  Q
    |||||||||| | |||||||||||| ||||| ||| | |||||||||||||||||| ||||||| ||||||    
T  30456500 tctctctaatgtcgtcatttctaattctatcccat-tggtcttaccacacatccaacgcaacatcctcatc 30456569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 104 - 157
Target Start/End: Original strand, 9905079 - 9905132
Alignment:
Q  104 ctacaaaatctataagtcttctctctacataatcaaaccacctaaacctatttt 157  Q
    |||||| ||||| |||||||||||||||||   |||||||||||| ||||||||    
T  9905079 ctacaacatctacaagtcttctctctacatgtccaaaccacctaagcctatttt 9905132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 268
Target Start/End: Original strand, 33666773 - 33666855
Alignment:
Q  185 tgctaccccaattttctctctaatttgtcatttctaatcctatctcatctagtctta-ccacacatccaatgcaacattctcatc 268  Q
    ||||||||||| | ||||||| ||  ||||||  |||||||||||||||||| |||| |||||||||||||  || |||||||||    
T  33666773 tgctaccccaactctctctcttat--gtcattcttaatcctatctcatctagccttacccacacatccaataaaatattctcatc 33666855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 131
Target Start/End: Original strand, 35914757 - 35914826
Alignment:
Q  62 ctctagtgatcagactatcctcaatttgatatactctctttcctacaaaatctataagtcttctctctac 131  Q
    |||||| |||| |||||||||| || |||  ||||||| || ||| |||||||||| |||||||||||||    
T  35914757 ctctagggatctgactatcctccatctgacctactctccttgctataaaatctataggtcttctctctac 35914826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 104 - 172
Target Start/End: Complemental strand, 13589570 - 13589502
Alignment:
Q  104 ctacaaaatctataagtcttctctctacataatcaaaccacctaaacctattttccaccatcttttcta 172  Q
    |||||| ||||||  |||||||||| ||||  ||||||||||||| | ||||||| ||||| |||||||    
T  13589570 ctacaacatctatcggtcttctctcaacatgttcaaaccacctaatcatattttctaccatattttcta 13589502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 110 - 174
Target Start/End: Complemental strand, 30748535 - 30748471
Alignment:
Q  110 aatctataagtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctact 174  Q
    |||||| | |||||||||||||||   |||||||||||| |||   |||||||||||||||||||    
T  30748535 aatctacaggtcttctctctacatgcccaaaccacctaagccttgattccaccatcttttctact 30748471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 137 - 181
Target Start/End: Original strand, 42493537 - 42493581
Alignment:
Q  137 caaaccacctaaacctattttccaccatcttttctactttaggtg 181  Q
    |||||||||||| |||| ||||||| |||||||||||| ||||||    
T  42493537 caaaccacctaagcctagtttccacaatcttttctactataggtg 42493581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 268
Target Start/End: Original strand, 44681398 - 44681434
Alignment:
Q  232 tctagtcttaccacacatccaatgcaacattctcatc 268  Q
    ||||||||||||||||||||||| |||||| ||||||    
T  44681398 tctagtcttaccacacatccaatacaacatcctcatc 44681434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 77; Significance: 1e-35; HSPs: 60)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 61 - 268
Target Start/End: Complemental strand, 47848801 - 47848598
Alignment:
Q  61 cctctagtgatcagactatcctcaatttgatatactctctttcctacaaaatctataagtcttctctctacataatcaaaccacctaaacctattttcca 160  Q
    ||||||||||||||||||||||| || |||| ||||||| ||  |||| ||| || |||||||||||| ||||   |||||||||||| |||||||||||    
T  47848801 cctctagtgatcagactatcctccatctgatctactctccttagtacagaatttacaagtcttctctcgacatgcccaaaccacctaagcctattttcca 47848702  T
Q  161 ccatcttttctactttaggtgctatgctaccccaattttctctctaat-ttgtcatttctaatcctatctcatctagtcttaccacacatccaatgcaac 259  Q
    |||||||||||||| ||||      |||||||||| | |||||||||| || ||| |||| |||||||| | ||||||||||||||||||||||  ||||    
T  47848701 ccatcttttctactatagg-----cgctaccccaactctctctctaatgttatcacttctgatcctatcccgtctagtcttaccacacatccaacacaac 47848607  T
Q  260 attctcatc 268  Q
    || ||||||    
T  47848606 atcctcatc 47848598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 61 - 184
Target Start/End: Original strand, 26742051 - 26742174
Alignment:
Q  61 cctctagtgatcagactatcctcaatttgatatactctctttcctacaaaatctataagtcttctctctacataatcaaaccacctaaacctattttcca 160  Q
    |||||||||||| |||||| ||| || |||| ||||||| || | |||||||||||| ||| | |||||||||  ||||||||||||| |||||||||||    
T  26742051 cctctagtgatctgactattctctatctgatctactctccttaccacaaaatctataggtcgtttctctacatgttcaaaccacctaatcctattttcca 26742150  T
Q  161 ccatcttttctactttaggtgcta 184  Q
    |||||||||||||| |||||||||    
T  26742151 ccatcttttctactataggtgcta 26742174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 61 - 268
Target Start/End: Original strand, 36101920 - 36102123
Alignment:
Q  61 cctctagtgatcagactatcctcaatttgatatactctctttcctacaaaatctataagtcttctctctacataatcaaaccacctaaacctattttcca 160  Q
    |||||||||||| |||||| ||| || |||| |||||||  |  ||||||||||||| |||||||||||||||   |||||||||||| |||||||||||    
T  36101920 cctctagtgatctgactattctccatatgatctactctccctgttacaaaatctataggtcttctctctacatccccaaaccacctaagcctattttcca 36102019  T
Q  161 ccatcttttctactttaggtgctatgctaccccaattttctctctaat-ttgtcatttctaatcctatctcatctagtcttaccacacatccaatgcaac 259  Q
     ||||||||||| | |||||||||   |    || | ||| ||| ||| |||||||||||||||  ||| ||||||||||||||||||||| ||  ||||    
T  36102020 acatcttttctattataggtgctacctt----cactcttc-ctcaaatgttgtcatttctaatctcatcccatctagtcttaccacacatcgaactcaac 36102114  T
Q  260 attctcatc 268  Q
    ||| |||||    
T  36102115 attttcatc 36102123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 61 - 267
Target Start/End: Original strand, 48736055 - 48736256
Alignment:
Q  61 cctctagtgatcagactatcctcaatttgatatactctctttcctacaaaatctataagtcttctctctacataatcaaaccacctaaacctattttcca 160  Q
    |||||||||||| ||||  |||| ||||||| ||||||| |  ||||| |||| | | |||||| |||||||| | ||||||||||||  ||| ||||      
T  48736055 cctctagtgatctgactc-cctccatttgatctactctcctaactacataatccacaggtcttcgctctacatgagcaaaccacctaagtctagtttctc 48736153  T
Q  161 ccatcttttctactttaggtgctatgctaccccaattttctctctaattt-gtcatttctaatcctatctcatctagtcttaccacacatccaatgcaac 259  Q
    |||||||||||||| |||||||||     |||||| | ||||| |||| | ||||||||||||  ||||||||||||||||||||||||| ||| |||||    
T  48736154 ccatcttttctactgtaggtgcta-----ccccaactctctctataatgtcgtcatttctaattttatctcatctagtcttaccacacattcaacgcaac 48736248  T
Q  260 attctcat 267  Q
    || |||||    
T  48736249 atcctcat 48736256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 104 - 268
Target Start/End: Complemental strand, 36136848 - 36136688
Alignment:
Q  104 ctacaaaatctataagtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgctatgctaccccaattttctct 203  Q
    |||||| ||||||| || ||||||||| ||   ||||| ||||||  |||||||| ||||||||||||||| ||||     ||||||||||| | |||||    
T  36136848 ctacaacatctataggtattctctctatatgcccaaacaacctaagactattttctaccatcttttctactatagg-----tgctaccccaactctctct 36136754  T
Q  204 ctaat-ttgtcatttctaatcctatctcatctagtcttaccacacatccaatgcaacattctcatc 268  Q
    |||||  ||||||| |||| |||||| | |||||||||||||| |||||||  |||||||||||||    
T  36136753 ctaatggtgtcattcctaaacctatcccttctagtcttaccacccatccaacacaacattctcatc 36136688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 59 - 267
Target Start/End: Complemental strand, 39812086 - 39811882
Alignment:
Q  59 ttcctctagtgatcagactatcctcaatttgatatactctctttcctacaaaatctataagtcttctctctacataatcaaaccacctaaacctattttc 158  Q
    |||||||||||||  | || ||||| || |||| ||||||| || ||| | |||||| |  ||||||||||||||   ||||| |||||| || | |||     
T  39812086 ttcctctagtgatttggctttcctccatctgatctactctccttactatagaatctacatctcttctctctacatgcccaaactacctaagccgagtttt 39811987  T
Q  159 caccatcttttctactttaggtgctatgctaccccaattttctctctaat-ttgtcatttctaatcctatctcatctagtcttaccacacatccaatgca 257  Q
    |||||| |||||||   ||||||||      |||||| | |||||||||| |||||||||||||||||||| | |||||||||||||||||||||| |||    
T  39811986 caccattttttctatgataggtgctg-----ccccaactctctctctaatgttgtcatttctaatcctatcacgtctagtcttaccacacatccaaagca 39811892  T
Q  258 acattctcat 267  Q
    |||| |||||    
T  39811891 acatcctcat 39811882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 62 - 280
Target Start/End: Complemental strand, 1740927 - 1740708
Alignment:
Q  62 ctctagtgatcagactatcctcaatttgatatactctctttcctacaaaatctataagtcttctctctacataatcaaaccacctaaacctattttccac 161  Q
    ||||||||||  ||||| |||| || |||| ||||||| || |||||||||| | || ||| || ||||||||  |||||||||||| |||| |||||||    
T  1740927 ctctagtgatttgactaccctccatctgatctactctccttactacaaaatccacaattctcctatctacatacccaaaccacctaagcctagtttccac 1740828  T
Q  162 catcttttctactttaggtgctatgctaccccaattttctctctaat-ttgtcatttctaatcctatctcatctagtcttaccacacatccaatgcaaca 260  Q
    ||| ||||||||| ||| |||||  | | | |   | |||||||||| || |||||||||||| || | || |||||||||| |||||||||| ||||||    
T  1740827 catattttctactgtagatgctacccaaactc-tctctctctctaatgttctcatttctaatcttaccccacctagtcttactacacatccaacgcaaca 1740729  T
Q  261 ttctcatc-ccgctacactta 280  Q
    | |||||| | ||||||||||    
T  1740728 tcctcatctctgctacactta 1740708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 119 - 280
Target Start/End: Complemental strand, 31005292 - 31005134
Alignment:
Q  119 gtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgctatgctaccccaattttctctctaatt-tgtcattt 217  Q
    |||||||||||||||   ||||||| |||||||||||||| |||| |||||||||| |||||||||     |||| | | ||||||||||  ||| |||     
T  31005292 gtcttctctctacatgcccaaaccatctaaacctattttctaccaacttttctactataggtgcta-----cccccactctctctctaatggtgttattc 31005198  T
Q  218 ctaatcctatctcatctagtcttaccacacatccaatgcaacattctcatc-ccgctacactta 280  Q
    |||||||||||   |||||||||||||| ||||||| ||||||| |||||| | ||||||||||    
T  31005197 ctaatcctatcctgtctagtcttaccactcatccaacgcaacatcctcatctctgctacactta 31005134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 104 - 280
Target Start/End: Original strand, 36514405 - 36514576
Alignment:
Q  104 ctacaaaatctataagtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgctatgctaccccaattttctct 203  Q
    ||||| |||| | ||||| |||||||||||   ||||||||||||  ||| |||| ||||||||||||||| |||||||||     |||||| |  ||||    
T  36514405 ctacagaatccacaagtcgtctctctacatgcccaaaccacctaagtctagtttctaccatcttttctactataggtgcta-----ccccaact--ctct 36514497  T
Q  204 ctaat-ttgtcatttctaatcctatctcatctagtcttaccacacatccaatgcaacattctcatc-ccgctacactta 280  Q
    ||||| ||||| |||||||| ||||| | | |||||||||||||||||||| ||||||| |||||| | ||||||||||    
T  36514498 ctaatgttgtcctttctaattctatcccgtttagtcttaccacacatccaacgcaacatcctcatctctgctacactta 36514576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 119 - 268
Target Start/End: Complemental strand, 34869489 - 34869344
Alignment:
Q  119 gtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgctatgctaccccaattttctctctaatt-tgtcattt 217  Q
    |||||||||||||||   ||||||| |||| ||||||||| |||| |||||||||| |||||||||     |||| | | ||||||||||  |||||||     
T  34869489 gtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgcta-----cccccactctctctctaatggtgtcattc 34869395  T
Q  218 ctaatcctatctcatctagtcttaccacacatccaatgcaacattctcatc 268  Q
    |||||||||||   |||||||||||||| ||||||| ||||||| ||||||    
T  34869394 ctaatcctatcatgtctagtcttaccactcatccaacgcaacatcctcatc 34869344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 78 - 184
Target Start/End: Complemental strand, 40169759 - 40169653
Alignment:
Q  78 atcctcaatttgatatactctctttcctacaaaatctataagtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctacttta 177  Q
    |||||| ||||||| ||||||| |||  ||||||||||   ||||| |||||||||   |||||||||||| ||||||||||||||||||||||||| ||    
T  40169759 atcctccatttgatctactctccttcacacaaaatctacgtgtcttatctctacatgcccaaaccacctaagcctattttccaccatcttttctactata 40169660  T
Q  178 ggtgcta 184  Q
     ||||||    
T  40169659 agtgcta 40169653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 61 - 267
Target Start/End: Complemental strand, 43282534 - 43282330
Alignment:
Q  61 cctctagtgatcagactatcctcaatttgatatactctctttcctacaaaatctataagtcttctctctacataatcaaaccacctaaacctattttcca 160  Q
    ||||| |||||| |||||||||| || | || ||||||| |||||||| |||||  |||||||||||||||||   |||  ||||||| |||| ||||||    
T  43282534 cctcttgtgatctgactatcctccatct-atctactctccttcctacagaatctgcaagtcttctctctacatgcccaattcacctaagcctagtttcca 43282436  T
Q  161 ccatcttttctactttaggtgctatgctaccccaattttctctct---aat-ttgtcatttctaatcctatctcatctagtcttaccacacatccaatgc 256  Q
    ||  |||||||||| ||||     ||||||||||| | |||||||   ||| ||||||||||||||| ||||   ||||| ||||||||||||| || ||    
T  43282435 ccgacttttctactatagg-----tgctaccccaactctctctctctaaatgttgtcatttctaatcatatcatgtctagacttaccacacatctaacgc 43282341  T
Q  257 aacattctcat 267  Q
    ||||| |||||    
T  43282340 aacatcctcat 43282330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 74 - 261
Target Start/End: Original strand, 46356024 - 46356207
Alignment:
Q  74 gactatcctcaatttgatatactctctttcctacaaaatctataagtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctac 173  Q
    |||| ||||| ||||||| ||||||  || | |||| |||||   |||||||||||||||   ||||||| |||||||||||||| |||| |||||||||    
T  46356024 gactctcctccatttgatctactcttcttaccacaacatctacgtgtcttctctctacatgcccaaaccatctaaacctattttctaccaacttttctac 46356123  T
Q  174 tttaggtgctatgctaccccaattttctctctaatt-tgtcatttctaatcctatctcatctagtcttaccacacatccaatgcaacat 261  Q
    | |||||||||     |||| ||| ||||||| ||  ||||||| |||||||||||   |||||||||||||| ||| ||| |||||||    
T  46356124 tataggtgcta-----cccccattctctctctgatggtgtcattcctaatcctatcctgtctagtcttaccactcattcaacgcaacat 46356207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 199 - 280
Target Start/End: Original strand, 27021994 - 27022077
Alignment:
Q  199 tctctctaat-ttgtcatttctaatcctatctcatctagtcttaccacacatccaatgcaacattctca-tcccgctacactta 280  Q
    |||||||||| ||||||||| ||||||||||   |||||||||| |||||||||||||||||||||||| | ||||||||||||    
T  27021994 tctctctaatgttgtcatttttaatcctatcctgtctagtcttatcacacatccaatgcaacattctcattgccgctacactta 27022077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 119 - 280
Target Start/End: Original strand, 35906414 - 35906572
Alignment:
Q  119 gtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgctatgctaccccaattttctctctaat-ttgtcattt 217  Q
    |||||||||||||||   ||||||| |||| ||||||||| |||| |||||||||| ||||     ||||||| | | | ||||||||||  |||||||     
T  35906414 gtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactatagg-----tgctacctccactctctctctaatggtgtcattc 35906508  T
Q  218 ctaatcctatctcatctagtcttaccacacatccaatgcaacattctcatc-ccgctacactta 280  Q
    |||||||||||   |||||||||||||| ||||||| ||||||| |||||| | ||||||||||    
T  35906509 ctaatcctatcctgtctagtcttaccactcatccaacgcaacatcctcatctctgctacactta 35906572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 119 - 268
Target Start/End: Complemental strand, 37618014 - 37617868
Alignment:
Q  119 gtcttctctctacataatcaaaccacctaaacctattttcc-accatcttttctactttaggtgctatgctaccccaattttctctctaatt-tgtcatt 216  Q
    |||||||||||||||   ||||||| |||| |||||||| | |||| |||||||||| |||||||||     |||| | | ||||||||||  |||||||    
T  37618014 gtcttctctctacatgcccaaaccatctaagcctatttttctaccaacttttctactataggtgcta-----cccccactctctctctaatggtgtcatt 37617920  T
Q  217 tctaatcctatctcatctagtcttaccacacatccaatgcaacattctcatc 268  Q
     ||||||||||||  |||||||||||||| ||||||| ||||||| ||||||    
T  37617919 cctaatcctatcttgtctagtcttaccactcatccaacgcaacatcctcatc 37617868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 119 - 280
Target Start/End: Original strand, 45836693 - 45836851
Alignment:
Q  119 gtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgctatgctaccccaattttctctctaatt-tgtcattt 217  Q
    |||||||||||||||   ||||||| |||| ||||||||| |||| |||||||||| |||||||||     |||| | | ||||||||||  |||||||     
T  45836693 gtcttctctctacatgtccaaaccatctaagcctattttctaccaacttttctactataggtgcta-----cccccactctctctctaatggtgtcattc 45836787  T
Q  218 ctaatcctatctcatctagtcttaccacacatccaatgcaacattctcatc-ccgctacactta 280  Q
    ||||||||||||  |||| ||||||||| ||||||  ||||||| |||||| ||||| ||||||    
T  45836788 ctaatcctatcttgtctactcttaccactcatccagcgcaacatcctcatctccgctgcactta 45836851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 119 - 280
Target Start/End: Complemental strand, 49029345 - 49029187
Alignment:
Q  119 gtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgctatgctaccccaattttctctctaatt-tgtcattt 217  Q
    |||||||||||||||   ||||||| |||| ||||||||| |||| |||||||||| |||||||||     |||| | | ||||||||||  |||||||     
T  49029345 gtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgcta-----cccccactctctctctaatggtgtcattc 49029251  T
Q  218 ctaatcctatctcatctagtcttaccacacatccaatgcaacattctcatc-ccgctacactta 280  Q
    |||||||||||   |||||||||||||| ||||||| | ||||| |||||| | ||||||||||    
T  49029250 ctaatcctatcatgtctagtcttaccactcatccaacgtaacatcctcatctctgctacactta 49029187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 30 - 184
Target Start/End: Complemental strand, 12966180 - 12966026
Alignment:
Q  30 aatagtttgtcttataatttttcaaggaattcctctagtgatcagactatcctcaatttgatatactctctttcctacaaaatctataagtcttctctct 129  Q
    |||||||| ||||||| |||||| |||  |||||||||||||  |||||  ||  | ||||| ||||||| || ||||| ||| ||   |||||||||||    
T  12966180 aatagtttctcttatagtttttctaggtcttcctctagtgatttgactagtcttcacttgatctactctccttactacagaatttacgggtcttctctct 12966081  T
Q  130 acataatcaaaccacctaaacctattttccaccatcttttctactttaggtgcta 184  Q
    ||||   |||||||||||| | || ||||||||||||||||| || |||||||||    
T  12966080 acatgcccaaaccacctaagcatagtttccaccatcttttcttctataggtgcta 12966026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 119 - 268
Target Start/End: Original strand, 13859221 - 13859366
Alignment:
Q  119 gtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgctatgctaccccaattttctctctaatt-tgtcattt 217  Q
    |||||||||||||||   ||||||| |||| ||||||||| |||| |||||||||| |||||||||     |||| | | ||||||||||  |||||||     
T  13859221 gtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgcta-----cccccactctctctctaatggtgtcattc 13859315  T
Q  218 ctaatcctatctcatctagtcttaccacacatccaatgcaacattctcatc 268  Q
    |||||||||||   |||||||||||||| | ||||| ||||||| ||||||    
T  13859316 ctaatcctatcatgtctagtcttaccactcgtccaacgcaacatcctcatc 13859366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 61 - 261
Target Start/End: Original strand, 28628088 - 28628284
Alignment:
Q  61 cctctagtgatcagactatcctcaatttgatatactctctttcctacaaaatctataagtcttctctctacataatcaaaccacctaaacctattttcca 160  Q
    ||||| |||||  |||||||||| ||  ||| ||||||| || ||||| |||||| | || |||||| |||||   |||||||||||| || ||||||||    
T  28628088 cctcttgtgatttgactatcctccatcggatctactctccttactacataatctacaggttttctctttacatgcccaaaccacctaagccaattttcca 28628187  T
Q  161 ccatcttttctactttaggtgctatgctaccccaattttctctctaat-ttgtcatttctaatcctatctcatctagtcttaccacacatccaatgcaac 259  Q
    ||||| |||||||| ||||     |||||| |||| |  ||||||||| |||| ||||||||||| ||| | | | ||||||||| |||||||| |||||    
T  28628188 ccatcatttctactctagg-----tgctactccaactccctctctaatgttgtaatttctaatcccatcccgtatggtcttaccatacatccaaggcaac 28628282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 93 - 170
Target Start/End: Complemental strand, 35713790 - 35713713
Alignment:
Q  93 tactctctttcctacaaaatctataagtcttctctctacataatcaaaccacctaaacctattttccaccatcttttc 170  Q
    ||||||| || ||||||||| || |||||||||||||||||   |||||||||||| ||||||||||||||| |||||    
T  35713790 tactctccttactacaaaatgtacaagtcttctctctacatgcccaaaccacctaagcctattttccaccattttttc 35713713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 119 - 184
Target Start/End: Original strand, 36869457 - 36869522
Alignment:
Q  119 gtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgcta 184  Q
    ||||||||||||||| | ||||||| |||||||||||||| |||| |||||||||| |||||||||    
T  36869457 gtcttctctctacatgaccaaaccatctaaacctattttctaccaacttttctactataggtgcta 36869522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 61 - 170
Target Start/End: Original strand, 38135368 - 38135476
Alignment:
Q  61 cctctagtgatcagactatcctcaatttgatatactctctttcctacaaaatctataagtcttctctctacataatcaaaccacctaaacctattttcca 160  Q
    |||||| ||||| |||||||||| || |||| || |||| || ||||||||||||   ||||||| |||||||   |||||||||||| |||||||||||    
T  38135368 cctctaatgatctgactatcctccatctgatcta-tctccttactacaaaatctactggtcttctgtctacatgtccaaaccacctaagcctattttcca 38135466  T
Q  161 ccatcttttc 170  Q
    ||||||||||    
T  38135467 ccatcttttc 38135476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 119 - 280
Target Start/End: Complemental strand, 43281743 - 43281587
Alignment:
Q  119 gtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgctatgctaccccaattttctctctaat-ttgtcattt 217  Q
    |||||||||||||||   ||||||| |||| ||||||||| |||| |||||||||| |||||||||     |||||    ||||||||||  |||||||     
T  43281743 gtcttctctctacatgtccaaaccatctaagcctattttctaccaacttttctactataggtgcta----ccccca---ctctctctaatggtgtcattc 43281651  T
Q  218 ctaatcctatctcatctagtcttaccacacatccaatgcaacattctcat-cccgctacactta 280  Q
    |||||||||| |  |||||||||||||| ||||||  ||||||| ||||| |||||||||||||    
T  43281650 ctaatcctatattgtctagtcttaccactcatccagcgcaacatcctcatccccgctacactta 43281587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 142 - 280
Target Start/End: Original strand, 30200199 - 30200330
Alignment:
Q  142 cacctaaacctattttccaccatcttttctactttaggtgctatgctaccccaattttctctctaat-ttgtcatttctaatcctatctcatctagtctt 240  Q
    ||||||| |||| |||||||||||||||||||| |||||| ||     ||| ||    ||||||||| ||||||||||||||| |||| |||||| ||||    
T  30200199 cacctaagcctagtttccaccatcttttctactataggtgtta-----ccctaa----ctctctaatgttgtcatttctaatcatatcccatctaatctt 30200289  T
Q  241 accacacatccaatgcaacattctcatc-ccgctacactta 280  Q
    |||||||||||||  |||||| |||||| | ||||||||||    
T  30200290 accacacatccaacacaacatcctcatctctgctacactta 30200330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 119 - 280
Target Start/End: Complemental strand, 38607073 - 38606916
Alignment:
Q  119 gtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgctatgctaccccaattttctctctaat-ttgtcattt 217  Q
    |||||||||||||||   ||||||| |||| ||||||||| |||| | |||||||| |||||||||     |||| | | ||||| |||| ||||||||     
T  38607073 gtcttctctctacatgtccaaaccatctaagcctattttctaccaacctttctactataggtgcta-----cccccactctctct-taatgttgtcattc 38606980  T
Q  218 ctaatcctatctcatctagtcttaccacacatccaatgcaacattctcatc-ccgctacactta 280  Q
    |||||||||||   |||||||||||||| ||||||  |||||||| ||||| ||||||||||||    
T  38606979 ctaatcctatcatgtctagtcttaccactcatccagcgcaacattatcatctccgctacactta 38606916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 93 - 184
Target Start/End: Complemental strand, 42187565 - 42187474
Alignment:
Q  93 tactctctttcctacaaaatctataagtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgcta 184  Q
    ||||||| || ||||| |||||| | | ||||||| |||||   |||||||||||| ||||||||||||||||||||||| | |||||||||    
T  42187565 tactctccttactacataatctacaggccttctctttacatgcccaaaccacctaagcctattttccaccatcttttctattataggtgcta 42187474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 61 - 163
Target Start/End: Original strand, 6420645 - 6420747
Alignment:
Q  61 cctctagtgatcagactatcctcaatttgatatactctctttcctacaaaatctataagtcttctctctacataatcaaaccacctaaacctattttcca 160  Q
    |||||||||||| ||||||| |  || |||| ||||||| || |||||  ||||| |||||||||||||||||   |||||||||||| |||| ||||||    
T  6420645 cctctagtgatctgactatcattcatctgatctactctccttactacagtatctacaagtcttctctctacatgcccaaaccacctaagcctagtttcca 6420744  T
Q  161 cca 163  Q
    |||    
T  6420745 cca 6420747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 110 - 268
Target Start/End: Original strand, 25579281 - 25579429
Alignment:
Q  110 aatctataagtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgctatgctaccccaattttctctctaat- 208  Q
    |||||| | |||||||||||||||   |||||||||||| ||||||||||||||| |||||| || | |||||||  || |||||    ||||||||||     
T  25579281 aatctacatgtcttctctctacatccccaaaccacctaagcctattttccaccattttttctgctatgggtgcta--ct-cccca---ctctctctaatg 25579374  T
Q  209 ttgtcatttctaatcctatctcatctagtcttaccacacatccaatgcaacattctcatc 268  Q
    | |||||||||||||||     ||||||| ||||||||||||||| ||||||| ||||||    
T  25579375 tggtcatttctaatcct-----atctagtattaccacacatccaacgcaacatcctcatc 25579429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 119 - 184
Target Start/End: Complemental strand, 6374937 - 6374872
Alignment:
Q  119 gtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgcta 184  Q
    |||||||||||||||  |||||||| |||| ||||||||| |||| |||||||||| |||||||||    
T  6374937 gtcttctctctacatgctcaaaccatctaagcctattttctaccaacttttctactataggtgcta 6374872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 62 - 181
Target Start/End: Original strand, 27893707 - 27893823
Alignment:
Q  62 ctctagtgatcagactatcctcaatttgatatactctctttcctacaaaatctataagtcttctctctacataatcaaaccacctaaacctattttccac 161  Q
    ||||||||||| || ||||||| || |||| ||||||| |   ||||||||||| |  ||||   |||||||  ||||||||||||| ||||||||||||    
T  27893707 ctctagtgatctgaatatcctccatctgatctactctcctaagtacaaaatctacagatctt---tctacatgttcaaaccacctaagcctattttccac 27893803  T
Q  162 catcttttctactttaggtg 181  Q
    ||||| ||||||| ||||||    
T  27893804 catctattctactataggtg 27893823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 119 - 261
Target Start/End: Complemental strand, 33073021 - 33072885
Alignment:
Q  119 gtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgctatgctaccccaattttctctctaatt-tgtcattt 217  Q
    |||||||||||||||   |||| || |||| ||||||||| |||| |||||||||| |||||||||     ||||| |   |||||||||  |||||||     
T  33073021 gtcttctctctacatgcccaaatcatctaagcctattttctaccaacttttctactataggtgctac----ccccact---ctctctaatggtgtcattc 33072929  T
Q  218 ctaatcctatctcatctagtcttaccacacatccaatgcaacat 261  Q
    ||||||||||||  |||||||||||||| ||||||| |||||||    
T  33072928 ctaatcctatcttgtctagtcttaccactcatccaacgcaacat 33072885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 119 - 280
Target Start/End: Complemental strand, 11594029 - 11593871
Alignment:
Q  119 gtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgctatgctaccccaattttctctctaat-ttgtcattt 217  Q
    |||||||||||||||   ||||||| |||| | ||||||| |||| |||||||||| ||||     ||||||||| | | |||||| |||  |||||||     
T  11594029 gtcttctctctacatgcccaaaccatctaaccgtattttctaccaacttttctactatagg-----tgctacccccactctctctcaaatggtgtcattc 11593935  T
Q  218 ctaatcctatctcatctagtcttaccacacatccaatgcaacattctcatc-ccgctacactta 280  Q
    |||||| ||||   |||||||||||||| ||||||| ||||||| |||||| | ||||||||||    
T  11593934 ctaatcttatcctgtctagtcttaccactcatccaacgcaacatcctcatctctgctacactta 11593871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 109 - 184
Target Start/End: Original strand, 19262636 - 19262711
Alignment:
Q  109 aaatctataagtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgcta 184  Q
    ||||||| | |||||||||||||||  ||||||||||||| || | |||| ||||||||||||||  |||||||||    
T  19262636 aaatctacaggtcttctctctacatgctcaaaccacctaagccaagtttctaccatcttttctacaataggtgcta 19262711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 209 - 248
Target Start/End: Original strand, 47796437 - 47796476
Alignment:
Q  209 ttgtcatttctaatcctatctcatctagtcttaccacaca 248  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  47796437 ttgtcatttctaatcctatcccatctagtcttaccacaca 47796476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 200 - 280
Target Start/End: Original strand, 28542173 - 28542254
Alignment:
Q  200 ctctctaat-ttgtcatttctaatcctatctcatctagtcttaccacacatccaatgcaacattctcatc-ccgctacactta 280  Q
    ||||||||| ||| |||||||||| ||||| || ||||||||||||||||||||| ||||||  |||||| ||||||||||||    
T  28542173 ctctctaatattgccatttctaattctatccca-ctagtcttaccacacatccaacgcaacaccctcatctccgctacactta 28542254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 118 - 184
Target Start/End: Complemental strand, 38920864 - 38920798
Alignment:
Q  118 agtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgcta 184  Q
    |||| |||||||||||   |||||||| ||| |||| |||||||||||||||||||| |||||||||    
T  38920864 agtcatctctctacatgcccaaaccacttaagcctagtttccaccatcttttctactataggtgcta 38920798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 119 - 268
Target Start/End: Original strand, 39906583 - 39906728
Alignment:
Q  119 gtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgctatgctaccccaattttctctctaat-ttgtcattt 217  Q
    |||||||||||||||   |||| || |||| ||||||||| |||| |||||||||| ||||     ||||||||  | | ||||||||||  |||||||     
T  39906583 gtcttctctctacatgcccaaatcatctaagcctattttctaccaacttttctactatagg-----tgctaccctcactctctctctaatggtgtcattc 39906677  T
Q  218 ctaatcctatctcatctagtcttaccacacatccaatgcaacattctcatc 268  Q
    |||||||||||   |||||||||||||| ||||||| ||| ||| ||||||    
T  39906678 ctaatcctatcctgtctagtcttaccactcatccaacgcagcatcctcatc 39906728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 119 - 252
Target Start/End: Original strand, 44855385 - 44855514
Alignment:
Q  119 gtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgctatgctaccccaattttctctctaat-ttgtcattt 217  Q
    |||||||||||||||   ||||||| |||| ||||||||| |||| |||||||||| ||||| ||||     ||| | | ||||||||||  |||||||     
T  44855385 gtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtactat-----ccccactctctctctaatggtgtcattc 44855479  T
Q  218 ctaatcctatctcatctagtcttaccacacatcca 252  Q
    |||||||||||   |||||||||||||| ||||||    
T  44855480 ctaatcctatcatgtctagtcttaccactcatcca 44855514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 74 - 164
Target Start/End: Original strand, 48202870 - 48202960
Alignment:
Q  74 gactatcctcaatttgatatactctctttcctacaaaatctataagtcttctctctacataatcaaaccacctaaacctattttccaccat 164  Q
    |||||||| | || |||| ||||||| || ||||| |||||| |||||||||||||||||   |||||||||||| ||||  |||||||||    
T  48202870 gactatccaccatatgatctactctccttactacagaatctacaagtcttctctctacatgcgcaaaccacctaagcctagattccaccat 48202960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 119 - 184
Target Start/End: Original strand, 12841488 - 12841553
Alignment:
Q  119 gtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgcta 184  Q
    |||||||||||||||   ||||||| |||| ||||||||| |||| |||||||||| |||||||||    
T  12841488 gtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgcta 12841553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 200 - 264
Target Start/End: Original strand, 25826759 - 25826824
Alignment:
Q  200 ctctctaat-ttgtcatttctaatcctatctcatctagtcttaccacacatccaatgcaacattct 264  Q
    ||||||||| || ||||||||||||||||||| | | ||||||||||| ||||||| |||||||||    
T  25826759 ctctctaatgttttcatttctaatcctatctcgtatggtcttaccacatatccaatacaacattct 25826824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 119 - 184
Target Start/End: Original strand, 31682815 - 31682880
Alignment:
Q  119 gtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgcta 184  Q
    ||||||||||||||||  ||||||| |||| ||||||||| |||| |||||||||| || ||||||    
T  31682815 gtcttctctctacatacccaaaccatctaagcctattttctaccaacttttctactatatgtgcta 31682880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 119 - 255
Target Start/End: Complemental strand, 41948585 - 41948453
Alignment:
Q  119 gtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgctatgctaccccaattttctctctaat-ttgtcattt 217  Q
    |||||||||||||||   |||||||| ||| |||| |||||||||||||||||| | || |     |||||| |||| | || ||||||| |||||||||    
T  41948585 gtcttctctctacatgcccaaaccacttaagcctagtttccaccatcttttctattgtaag-----tgctacgccaactctcactctaatgttgtcattt 41948491  T
Q  218 ctaatcctatctcatctagtcttaccacacatccaatg 255  Q
    |||||| |||||| | |||| ||| || ||||||||||    
T  41948490 ctaatcgtatctcgtttagttttatcagacatccaatg 41948453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 184
Target Start/End: Original strand, 2885936 - 2886000
Alignment:
Q  120 tcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgcta 184  Q
    ||||||||||||||   ||||||| |||| ||||||||| |||| |||||||||| |||||||||    
T  2885936 tcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgcta 2886000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 182
Target Start/End: Original strand, 7189442 - 7189502
Alignment:
Q  122 ttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgc 182  Q
    ||||||||||||   |||||||||||| | ||||||| ||||||||||||||| |||||||    
T  7189442 ttctctctacatgcccaaaccacctaagcttattttctaccatcttttctactataggtgc 7189502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 184
Target Start/End: Original strand, 27021906 - 27021970
Alignment:
Q  120 tcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgcta 184  Q
    ||||||||||||||   |||||||||||| |||| ||| ||||| |||||||||| |||||||||    
T  27021906 tcttctctctacatgcccaaaccacctaagcctagttttcaccaacttttctactataggtgcta 27021970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 79 - 253
Target Start/End: Original strand, 8492406 - 8492576
Alignment:
Q  79 tcctcaatttgatatactctctttcctacaaaatctataagtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttag 178  Q
    ||||| || |||| |||||| | | |||||| ||||| ||||||| ||||||||   ||||||||||| | ||||||||| |||||| ||| |||| |||    
T  8492406 tcctccatctgatctactctttgtactacaacatctacaagtcttttctctacaagttcaaaccaccttagcctattttctaccatcatttttactatag 8492505  T
Q  179 gtgctatgctaccccaattttctctctaat-ttgtcatttctaatcctatctcatctagtcttaccacacatccaa 253  Q
    |     || |||||||| | |||| |||||  |||||||  |||||||||| | ||||||||| |||| |||||||    
T  8492506 g-----tgttaccccaaatctctccctaatggtgtcattcgtaatcctatcccgtctagtcttgccactcatccaa 8492576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 268
Target Start/End: Complemental strand, 14593755 - 14593685
Alignment:
Q  199 tctctctaat-ttgtcatttctaatcctatctcatctagtcttaccacacatccaatgcaacattctcatc 268  Q
    |||||||||| |||||||||||||| |  |  | |||||||||||||||||||||| ||||||| ||||||    
T  14593755 tctctctaatgttgtcatttctaattcggttccgtctagtcttaccacacatccaacgcaacatcctcatc 14593685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 120 - 261
Target Start/End: Complemental strand, 28021032 - 28020895
Alignment:
Q  120 tcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgctatgctaccccaattttctctctaat-ttgtcatttc 218  Q
    ||||||||||||||   |||||||||||| || | |||||||||||||||||||  || |     ||||||||||| | | |||||||| || |||||||    
T  28021032 tcttctctctacatgcccaaaccacctaagccaagtttccaccatcttttctacgataag-----tgctaccccaactctttctctaatgttatcatttc 28020938  T
Q  219 taatcctatctcatctagtcttaccacacatccaatgcaacat 261  Q
     |||| ||||   || ||||||| |||||||| ||||||||||    
T  28020937 gaatcatatcatgtccagtcttatcacacatctaatgcaacat 28020895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 210 - 260
Target Start/End: Original strand, 29653854 - 29653904
Alignment:
Q  210 tgtcatttctaatcctatctcatctagtcttaccacacatccaatgcaaca 260  Q
    ||||||||||||| ||||| | |||||| ||||||||||||||| ||||||    
T  29653854 tgtcatttctaattctatcccgtctagtgttaccacacatccaacgcaaca 29653904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 210 - 268
Target Start/End: Complemental strand, 36651976 - 36651918
Alignment:
Q  210 tgtcatttctaatcctatctcatctagtcttaccacacatccaatgcaacattctcatc 268  Q
    ||||||| |||||||||||   |||||||||||||| ||||||| ||||||| ||||||    
T  36651976 tgtcattcctaatcctatcctgtctagtcttaccactcatccaacgcaacatcctcatc 36651918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 173
Target Start/End: Complemental strand, 5418207 - 5418094
Alignment:
Q  61 cctctagtgatcagactatcctcaatttgatatactctctttcctacaaaatctataagtcttctctctacataatcaaaccacctaaa-cctattttcc 159  Q
    |||||||||||| |||||||||| |  |||| ||||||  || ||||| |||| | | ||||||| |||||||   ||||| | ||||| ||||||||||    
T  5418207 cctctagtgatctgactatcctccacctgatctactctacttactacagaatcaacaggtcttctttctacatgcacaaacaatctaaagcctattttcc 5418108  T
Q  160 accatcttttctac 173  Q
    ||||| ||||||||    
T  5418107 accatattttctac 5418094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 267
Target Start/End: Complemental strand, 37595679 - 37595630
Alignment:
Q  218 ctaatcctatctcatctagtcttaccacacatccaatgcaacattctcat 267  Q
    ||||||||||||  ||||||||||| ||| || |||||||||||||||||    
T  37595679 ctaatcctatcttgtctagtcttactacatattcaatgcaacattctcat 37595630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 251
Target Start/End: Original strand, 40139204 - 40139257
Alignment:
Q  199 tctctctaat-ttgtcatttctaatcctatctcatctagtcttaccacacatcc 251  Q
    |||||||||| ||||| ||||||||| |||| | ||||||||||||||||||||    
T  40139204 tctctctaatgttgtcttttctaatcttatcccgtctagtcttaccacacatcc 40139257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 158
Target Start/End: Original strand, 9797888 - 9797956
Alignment:
Q  90 atatactctctttcctacaaaatctataagtcttctctctacataatcaaaccacctaaacctattttc 158  Q
    |||||| ||| || || ||||||||| |||||||||||||||||   |||||||||||| || ||||||    
T  9797888 atatacgctccttacttcaaaatctacaagtcttctctctacatgtccaaaccacctaagccaattttc 9797956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 268
Target Start/End: Complemental strand, 16013244 - 16013208
Alignment:
Q  232 tctagtcttaccacacatccaatgcaacattctcatc 268  Q
    |||||||||||||||||||||| ||||||| ||||||    
T  16013244 tctagtcttaccacacatccaacgcaacatcctcatc 16013208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 137 - 173
Target Start/End: Original strand, 28542127 - 28542163
Alignment:
Q  137 caaaccacctaaacctattttccaccatcttttctac 173  Q
    ||||||||||||  |||||||||||||||||||||||    
T  28542127 caaaccacctaaggctattttccaccatcttttctac 28542163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 119 - 183
Target Start/End: Complemental strand, 29650453 - 29650389
Alignment:
Q  119 gtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgct 183  Q
    |||||||||||||||   ||||||| |||| ||||||||| ||||  ||||||||| ||||||||    
T  29650453 gtcttctctctacatgtccaaaccatctaagcctattttctaccaatttttctactataggtgct 29650389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 75; Significance: 2e-34; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 61 - 276
Target Start/End: Complemental strand, 38435079 - 38434866
Alignment:
Q  61 cctctagtgatcagactatcctcaatttgatatactctctttcctacaaaatctataagtcttctctctacataatcaaaccacctaaac-ctattttcc 159  Q
    |||||||||||| |||||||||| || |||| ||||||| || ||| |  ||||| ||||||||||| |||||   ||||||||| |||  ||| |||||    
T  38435079 cctctagtgatctgactatcctccatatgatctactctccttactaaagcatctacaagtcttctctttacatgcccaaaccacccaaagtctagtttcc 38434980  T
Q  160 accatcttttctactttaggtgctatgctaccccaattttctctctaat-ttgtcatttctaatcctatctcatctagtcttaccacacatccaatgcaa 258  Q
    ||||||||||||||| |||||||||     |||||||| |||||||||| ||||||||||||||| | |||| |||||| ||||||| ||||||||||||    
T  38434979 accatcttttctactataggtgcta-----ccccaattctctctctaatgttgtcatttctaatcttctctcgtctagttttaccacgcatccaatgcaa 38434885  T
Q  259 cattctcatc-ccgctaca 276  Q
    ||| |||||| ||||||||    
T  38434884 catcctcatctccgctaca 38434866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 74 - 266
Target Start/End: Original strand, 9556537 - 9556724
Alignment:
Q  74 gactatcctcaatttgatatactctctttcctacaaaatctataagtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctac 173  Q
    |||||||||| || ||||||||| |  || ||||| ||||||   |||||||||||||||    ||||||||||| ||||||||||||||| ||||||||    
T  9556537 gactatcctccatctgatatacttttcttactacagaatctacttgtcttctctctacatgcctaaaccacctaagcctattttccaccat-ttttctac 9556635  T
Q  174 tttaggtgctatgctaccccaattttctctctaat-ttgtcatttctaatcctatctcatctagtcttaccacacatccaatgcaacattctca 266  Q
    | || ||| ||     |||||| |||||||||||| ||||||||||||||| |||| | |||| |||||||||||||||||  |||||| ||||    
T  9556636 tataagtgtta-----ccccaactttctctctaatgttgtcatttctaatcatatcccgtctaatcttaccacacatccaacacaacatcctca 9556724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 61 - 253
Target Start/End: Original strand, 43752102 - 43752290
Alignment:
Q  61 cctctagtgatcagactatcctcaatttgatatactctctttcctacaaaatctataagtcttctctctacataatcaaaccacctaaacctattttcca 160  Q
    |||| ||||||| || ||||||| || |||| |||||||  | ||||| |||||||| |||||||||||||||   |||| ||||||| ||||||||| |    
T  43752102 cctccagtgatctgagtatcctccatctgatctactctccctactacataatctataggtcttctctctacatgtccaaatcacctaagcctattttcta 43752201  T
Q  161 ccatcttttctactttaggtgctatgctaccccaattttctctctaat-ttgtcatttctaatcctatctcatctagtcttaccacacatccaa 253  Q
    ||| |||||||||| ||||     ||||||||||| | |||||||||| | |||| |||||||| |||| ||||| || ||||| |||||||||    
T  43752202 ccaccttttctactatagg-----tgctaccccaactctctctctaatatggtcagttctaatcttatcccatctggttttaccgcacatccaa 43752290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 68 - 184
Target Start/End: Complemental strand, 18959031 - 18958911
Alignment:
Q  68 tgatcagactatcctcaatttgatatactctctttcctacaaaatctataagtcttctctctacat----aatcaaaccacctaaacctattttccacca 163  Q
    ||||| |||||||||| || |||| ||||||| || |||||||| ||  | ||||||||||| |||    || |||||||||||| ||||||||||||||    
T  18959031 tgatctgactatcctccatctgatctactctccttactacaaaagctgcaggtcttctctctgcatgcccaaccaaaccacctaagcctattttccacca 18958932  T
Q  164 tcttttctactttaggtgcta 184  Q
    ||||||||||| |||||||||    
T  18958931 tcttttctactataggtgcta 18958911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 74 - 168
Target Start/End: Complemental strand, 3481255 - 3481161
Alignment:
Q  74 gactatcctcaatttgatatactctctttcctacaaaatctataagtcttctctctacataatcaaaccacctaaacctattttccaccatcttt 168  Q
    |||||||||| || |||| ||||||| || ||||| |||||||| |||||||||||||||   |||||||||||| ||| |||||||||||||||    
T  3481255 gactatcctccatctgatctactctccttgctacagaatctataggtcttctctctacatgtccaaaccacctaagcctgttttccaccatcttt 3481161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 74 - 184
Target Start/End: Complemental strand, 12141658 - 12141548
Alignment:
Q  74 gactatcctcaatttgatatactctctttcctacaaaatctataagtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctac 173  Q
    ||||||||||||| |||| ||||||| || ||| | |||||| | ||||||| ||||| |   |||||||||||| ||| ||||||||||||||||||||    
T  12141658 gactatcctcaatctgatctactctccttactagagaatctacaggtcttctttctacgtgcccaaaccacctaagcctcttttccaccatcttttctac 12141559  T
Q  174 tttaggtgcta 184  Q
    | |||||||||    
T  12141558 tataggtgcta 12141548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 119 - 280
Target Start/End: Original strand, 41763255 - 41763412
Alignment:
Q  119 gtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgctatgctaccccaattttctctctaatt-tgtcattt 217  Q
    ||||||||||| |||   |||||||||||| ||||||||| |||| |||||||||| |||||| ||      ||| | | ||||||||||  |||||||     
T  41763255 gtcttctctctgcatgtccaaaccacctaagcctattttctaccaacttttctactataggtgtta------ccccactctctctctaatggtgtcattc 41763348  T
Q  218 ctaatcctatctcatctagtcttaccacacatccaatgcaacattctcatc-ccgctacactta 280  Q
    ||||||||||||  |||||||||||||| ||||||  ||||||| |||||| ||||||||||||    
T  41763349 ctaatcctatcttgtctagtcttaccactcatccatcgcaacatcctcatctccgctacactta 41763412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 210 - 280
Target Start/End: Original strand, 16097290 - 16097361
Alignment:
Q  210 tgtcatttctaatcctatctcatctagtcttaccacacatccaatgcaacattctcatc-ccgctacactta 280  Q
    |||||||||||||| |||| |||||||||||||||| |||||| |||||||| |||||| ||||||||||||    
T  16097290 tgtcatttctaatcatatcccatctagtcttaccactcatccagtgcaacatcctcatctccgctacactta 16097361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 119 - 280
Target Start/End: Complemental strand, 38429953 - 38429795
Alignment:
Q  119 gtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgctatgctaccccaattttctctctaatt-tgtcattt 217  Q
    ||||||||| |||||   ||||||| |||| ||||||||| |||| |||||||||| ||||||||      |||| | | ||||||||||  |||||||     
T  38429953 gtcttctctttacatgtccaaaccatctaagcctattttctaccaacttttctactataggtgctg-----cccccactctctctctaatggtgtcattc 38429859  T
Q  218 ctaatcctatctcatctagtcttaccacacatccaatgcaacattctcatc-ccgctacactta 280  Q
    |||||||||||   |||||||||||||| ||||||| ||||||| |||||| ||||||||||||    
T  38429858 ctaatcctatcatgtctagtcttaccactcatccaacgcaacatcctcatctccgctacactta 38429795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 93 - 261
Target Start/End: Complemental strand, 42092612 - 42092450
Alignment:
Q  93 tactctctttcctacaaaatctataagtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgctatgctaccc 192  Q
    ||||||| || |||||||||||| ||| |||||||||||||   || | ||||||| | || |||| ||||||||||||| | |||| ||||     |||    
T  42092612 tactctccttactacaaaatctacaagccttctctctacatgcccagatcacctaatcttagtttctaccatcttttctagtataggcgcta-----ccc 42092518  T
Q  193 caattttctctctaat-ttgtcatttctaatcctatctcatctagtcttaccacacatccaatgcaacat 261  Q
    ||| |  ||||||||  ||||||||||||||| |||| | ||||||||||| ||||||||||||||||||    
T  42092517 caact--ctctctaacattgtcatttctaatcatatcccgtctagtcttactacacatccaatgcaacat 42092450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 111 - 268
Target Start/End: Complemental strand, 40759177 - 40759023
Alignment:
Q  111 atctataagtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgctatgctaccccaattttctctctaat-t 209  Q
    ||||| |||||||||||||||||   ||||||||||||  ||| |||||||||| ||||||||| || ||||||    |||| |  | |||||||||| |    
T  40759177 atctaaaagtcttctctctacatgcacaaaccacctaactctagtttccaccattttttctactataagtgcta----acccaacctctctctctaatgt 40759082  T
Q  210 tgtcatttctaatcctatctcatctagtcttaccacacatccaatgcaacattctcatc 268  Q
    |||||||||||||| |||||  |||||||||||  |||||| | || ||||| ||||||    
T  40759081 tgtcatttctaatcttatcttgtctagtcttacaccacatctagtgaaacatcctcatc 40759023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 88 - 228
Target Start/End: Original strand, 13240927 - 13241063
Alignment:
Q  88 tgatatactctctttcctacaaaatctataagtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgctatgc 187  Q
    |||| ||||||| || ||| | |||||| | |||||||||||||||   |||||||||||| |||| ||||||||||||||||||    |  | || |||    
T  13240927 tgatctactctccttactaaagaatctacatgtcttctctctacatgcccaaaccacctaagcctagtttccaccatcttttcta----acatact-tgc 13241021  T
Q  188 taccccaattttctctctaat-ttgtcatttctaatcctatc 228  Q
    ||| |||||| |||||||||| ||||||||||||||||||||    
T  13241022 tactccaattctctctctaatgttgtcatttctaatcctatc 13241063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 119 - 280
Target Start/End: Complemental strand, 8180849 - 8180691
Alignment:
Q  119 gtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgctatgctaccccaattttctctctaatt-tgtcattt 217  Q
    |||||||||||||||   ||||||| |||| | ||||||| |||| |||||||||| |||||||||     |||| | | ||||||||||  |||||||     
T  8180849 gtcttctctctacatgcccaaaccatctaagcttattttctaccaacttttctactataggtgcta-----cccccactctctctctaatggtgtcattc 8180755  T
Q  218 ctaatcctatctcatctagtcttaccacacatccaatgcaacattctcatc-ccgctacactta 280  Q
    |||||||||||   |||||||||||||| |||||||  |||||| |||||| | ||||||||||    
T  8180754 ctaatcctatcatgtctagtcttaccactcatccaacacaacatcctcatctctgctacactta 8180691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 213 - 268
Target Start/End: Original strand, 9647908 - 9647963
Alignment:
Q  213 catttctaatcctatctcatctagtcttaccacacatccaatgcaacattctcatc 268  Q
    ||||||||||| |||| |||||||||||||||||||||||| ||||||| ||||||    
T  9647908 catttctaatcttatcacatctagtcttaccacacatccaacgcaacatcctcatc 9647963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 119 - 280
Target Start/End: Complemental strand, 36183520 - 36183362
Alignment:
Q  119 gtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgctatgctaccccaattttctctctaatt-tgtcattt 217  Q
    |||||||||||||||    |||||| ||||   ||||||| |||| |||||||||| |||||||||     |||| | | ||||||||||| |||||||     
T  36183520 gtcttctctctacatgccgaaaccaactaagattattttctaccaacttttctactataggtgcta-----cccctactctctctctaattgtgtcattc 36183426  T
Q  218 ctaatcctatctcatctagtcttaccacacatccaatgcaacattctcatc-ccgctacactta 280  Q
    |||||||||||   |||||||||||||| ||||||| ||||||| |||||| | ||||||||||    
T  36183425 ctaatcctatcatgtctagtcttaccactcatccaacgcaacatcctcatctctgctacactta 36183362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 88 - 165
Target Start/End: Original strand, 12026187 - 12026264
Alignment:
Q  88 tgatatactctctttcctacaaaatctataagtcttctctctacataatcaaaccacctaaacctattttccaccatc 165  Q
    |||| ||||||| ||  ||||||||||| | |||||||||||||||  ||||||||||||| |||| |||||||||||    
T  12026187 tgatctactctccttagtacaaaatctacaggtcttctctctacatggtcaaaccacctaagcctagtttccaccatc 12026264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 209 - 253
Target Start/End: Complemental strand, 21834536 - 21834492
Alignment:
Q  209 ttgtcatttctaatcctatctcatctagtcttaccacacatccaa 253  Q
    |||| |||||||||| |||||||||||||||||||||||||||||    
T  21834536 ttgtaatttctaatcttatctcatctagtcttaccacacatccaa 21834492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 66 - 268
Target Start/End: Complemental strand, 45077877 - 45077672
Alignment:
Q  66 agtgatcagactatcctcaatttgatatactctctttcctacaaaatctataagtcttctctctacataatcaaaccacct---aaacctattttccacc 162  Q
    ||||||| |||||||||| || |||| ||||||| || |||||||||||| |||| ||||||||||||    |||||||||   ||  ||| | ||||||    
T  45077877 agtgatctgactatcctccatctgatctactctccttactacaaaatctacaagttttctctctacatgccaaaaccacctcccaagtctactctccacc 45077778  T
Q  163 atcttttctactttaggtgctatgctaccccaattttctctctaat-ttgtcatttctaatcctatctcatctagtcttaccacacatccaatgcaacat 261  Q
    |||||||||||| ||| |||||  | | | |  | | | ||||||  ||  |||||||||| ||||||  |||||||||||||||||||||| |||||||    
T  45077777 atcttttctactatagatgctactcaaactctctctcc-ctctaaagttcacatttctaattctatctagtctagtcttaccacacatccaacgcaacat 45077679  T
Q  262 tctcatc 268  Q
     ||||||    
T  45077678 cctcatc 45077672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 119 - 261
Target Start/End: Complemental strand, 3866141 - 3866003
Alignment:
Q  119 gtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgctatgctaccccaattttctctctaat-ttgtcattt 217  Q
    |||||||||||||||   ||||||| |||| ||||||||| |||| ||||| |||| ||||     ||||||||| | | |||||| |||  |||||||     
T  3866141 gtcttctctctacatgcacaaaccatctaagcctattttctaccaacttttttactatagg-----tgctacccccactctctctccaatggtgtcattc 3866047  T
Q  218 ctaatcctatctcatctagtcttaccacacatccaatgcaacat 261  Q
    |||||||||||   |||||||||||||| ||||||| |||||||    
T  3866046 ctaatcctatcatgtctagtcttaccactcatccaacgcaacat 3866003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 61 - 184
Target Start/End: Complemental strand, 6219094 - 6218971
Alignment:
Q  61 cctctagtgatcagactatcctcaatttgatatactctctttcctacaaaatctataagtcttctctctacataatcaaaccacctaaacctattttcca 160  Q
    |||| |||||||  ||||||||| |||||||   ||||| || ||||| |||||| |  ||| ||||||||||   |||||||||||| |||||| ||||    
T  6219094 cctccagtgatcccactatcctccatttgatcacctctccttactacataatctacatatctcctctctacatgtccaaaccacctaagcctattatcca 6218995  T
Q  161 ccatcttttctactttaggtgcta 184  Q
    | |||||||||||| || ||||||    
T  6218994 ctatcttttctactataagtgcta 6218971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 110 - 180
Target Start/End: Original strand, 14197366 - 14197437
Alignment:
Q  110 aatctataagtcttctctctacataatcaaaccacctaaa-cctattttccaccatcttttctactttaggt 180  Q
    |||||| |||||||| ||||||||   ||||||||||||| |||| |||||||||||||||||||| |||||    
T  14197366 aatctacaagtcttcactctacatgcccaaaccacctaaagcctagtttccaccatcttttctactataggt 14197437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 187 - 253
Target Start/End: Complemental strand, 41858746 - 41858679
Alignment:
Q  187 ctaccccaattttctctctaat-ttgtcatttctaatcctatctcatctagtcttaccacacatccaa 253  Q
    ||||||||||| |||||||||| |||||||||||||||   ||||||  |||||||||||||||||||    
T  41858746 ctaccccaattctctctctaatgttgtcatttctaatcacgtctcatacagtcttaccacacatccaa 41858679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 261
Target Start/End: Complemental strand, 7825438 - 7825289
Alignment:
Q  110 aatctataagtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgctatgctaccccaattttctctctaatt 209  Q
    |||||| | |||||||||||||||  |||||||| |||| | |||||| |||||| ||| | ||| |||||||||  | | | |   | ||||||||||     
T  7825438 aatctacatgtcttctctctacatgctcaaaccaactaagcttatttttcaccatatttacaactataggtgctactccaacac---tctctctctaata 7825342  T
Q  210 -tgtcatttctaatcctatctcatctagtcttaccacacatccaatgcaacat 261  Q
     |||||||||||||| ||||   |||||||||||||||||||||| |||||||    
T  7825341 gtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacat 7825289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 85 - 264
Target Start/End: Original strand, 23714440 - 23714612
Alignment:
Q  85 atttgatatactctctttcctacaaaatctataagtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgcta 184  Q
    ||||||| ||||||| || ||||| |||| | |||||||||||||||||    |||| || |||  ||| |||||||||||||||||||| || ||||||    
T  23714440 atttgatctactctccttactacataatccacaagtcttctctctacatgcctaaactacataagtctagtttccaccatcttttctactatatgtgcta 23714539  T
Q  185 tgctaccccaattttctctctaat-ttgtcatttctaatcctatctcatctagtcttaccacacatccaatgcaacattct 264  Q
          |||||   ||| |||||| | ||||||| ||||||||| |  ||||||||||||||||||||||  |||||||||    
T  23714540 ------cccaa--ctctatctaatgtcgtcatttttaatcctattttgtctagtcttaccacacatccaacacaacattct 23714612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 85 - 264
Target Start/End: Original strand, 24102112 - 24102284
Alignment:
Q  85 atttgatatactctctttcctacaaaatctataagtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgcta 184  Q
    ||||||| ||||||| || ||||| |||| | |||||||||||||||||    |||| || |||  ||| |||||||||||||||||||| || ||||||    
T  24102112 atttgatctactctccttactacataatccacaagtcttctctctacatgcctaaactacataagtctagtttccaccatcttttctactatatgtgcta 24102211  T
Q  185 tgctaccccaattttctctctaat-ttgtcatttctaatcctatctcatctagtcttaccacacatccaatgcaacattct 264  Q
          |||||   ||| |||||| | ||||||| ||||||||| |  ||||||||||||||||||||||  |||||||||    
T  24102212 ------cccaa--ctctatctaatgtcgtcatttttaatcctattttgtctagtcttaccacacatccaacacaacattct 24102284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 210 - 268
Target Start/End: Original strand, 41779606 - 41779664
Alignment:
Q  210 tgtcatttctaatcctatctcatctagtcttaccacacatccaatgcaacattctcatc 268  Q
    ||||||||||||||||||| |  ||||||||| |||||||  |||||||||||||||||    
T  41779606 tgtcatttctaatcctatcccgcctagtcttaacacacatttaatgcaacattctcatc 41779664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 119 - 184
Target Start/End: Complemental strand, 25834750 - 25834685
Alignment:
Q  119 gtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgcta 184  Q
    |||||||||||||||   ||||||| |||| ||||||||| |||| |||||||||| |||||||||    
T  25834750 gtcttctctctacatgtccaaaccatctaagcctattttctaccaacttttctactataggtgcta 25834685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 63 - 160
Target Start/End: Original strand, 42149803 - 42149900
Alignment:
Q  63 tctagtgatcagactatcctcaatttgatatactctctttcctacaaaatctataagtcttctctctacataatcaaaccacctaaacctattttcca 160  Q
    |||||||||  | |||||||  || |||| ||||||| || ||||| |||||||| |  ||||||||||||| ||||||||||||| |||| ||||||    
T  42149803 tctagtgatttggctatcctgcatctgatctactctccttactacagaatctataggatttctctctacatactcaaaccacctaagcctagtttcca 42149900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 200 - 268
Target Start/End: Complemental strand, 44411709 - 44411640
Alignment:
Q  200 ctctctaat-ttgtcatttctaatcctatctcatctagtcttaccacacatccaatgcaacattctcatc 268  Q
    ||||||||| ||||||||| ||||| |||||||||||||||||| ||||||| || |||| ||| |||||    
T  44411709 ctctctaatgttgtcatttgtaatcatatctcatctagtcttacaacacatcaaacgcaatattatcatc 44411640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 104 - 184
Target Start/End: Complemental strand, 11017398 - 11017318
Alignment:
Q  104 ctacaaaatctataagtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgcta 184  Q
    ||||||||||||   |||||||||| |||||  |||||||| ||| || | ||||||| |||||||||||| |||||||||    
T  11017398 ctacaaaatctacgggtcttctctccacatacccaaaccacttaagccgagtttccacgatcttttctactataggtgcta 11017318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 104 - 223
Target Start/End: Original strand, 37481815 - 37481930
Alignment:
Q  104 ctacaaaatctataagtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgctatgctaccccaattttctct 203  Q
    |||||||||  | |||||||||||||||||  ||||||||||||| ||||  ||| |||||||||| |||| ||||       ||||||||| | |||||    
T  37481815 ctacaaaattcacaagtcttctctctacatgctcaaaccacctaagcctaggttcaaccatcttttttactatagg-----aactaccccaactctctct 37481909  T
Q  204 ctaat-ttgtcatttctaatc 223  Q
    ||||| |||||||||||||||    
T  37481910 ctaatgttgtcatttctaatc 37481930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 137 - 184
Target Start/End: Complemental strand, 11412772 - 11412725
Alignment:
Q  137 caaaccacctaaacctattttccaccatcttttctactttaggtgcta 184  Q
    ||||| |||||| ||||||||||||||| ||||||||| |||||||||    
T  11412772 caaacaacctaagcctattttccaccatattttctactataggtgcta 11412725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 252
Target Start/End: Complemental strand, 12734768 - 12734641
Alignment:
Q  119 gtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgctatgctaccccaattttctctctaatt-tgtcattt 217  Q
    ||||||||| |||||   ||||||| |||| ||||||||| ||||  ||||||||| |||||||||     ||||| |   |||||||||  ||||||||    
T  12734768 gtcttctctttacatgtccaaaccatctaagcctattttctaccaatttttctactataggtgctac----ccccact---ctctctaatggtgtcattt 12734676  T
Q  218 ctaatcctatctcatctagtcttaccacacatcca 252  Q
    ||||||||||| | |||||||||||||| ||||||    
T  12734675 ctaatcctatcccgtctagtcttaccactcatcca 12734641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 137 - 183
Target Start/End: Original strand, 12882271 - 12882317
Alignment:
Q  137 caaaccacctaaacctattttccaccatcttttctactttaggtgct 183  Q
    |||||||||||| ||||||||| ||||||||||||| | ||||||||    
T  12882271 caaaccacctaagcctattttctaccatcttttctagtataggtgct 12882317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 120 - 280
Target Start/End: Original strand, 41197442 - 41197599
Alignment:
Q  120 tcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgctatgctaccccaattttctctctaat-ttgtcatttc 218  Q
    ||||||||||||||   ||||||| |||| ||||||||| |||| |||||||| | ||||     ||||||||  | | | ||||||||  ||||||| |    
T  41197442 tcttctctctacatgtccaaaccatctaagcctattttctaccaacttttctattatagg-----tgctaccctcactctatctctaatggtgtcattcc 41197536  T
Q  219 taatcctatctcatctagtcttaccacacatccaatgcaacattctcatc-ccgctacactta 280  Q
    ||||||||||   |||||||||||||| |||| |  ||||||| |||||| ||||||||||||    
T  41197537 taatcctatcatgtctagtcttaccactcatctagcgcaacatcctcatctccgctacactta 41197599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 210 - 268
Target Start/End: Original strand, 41779032 - 41779090
Alignment:
Q  210 tgtcatttctaatcctatctcatctagtcttaccacacatccaatgcaacattctcatc 268  Q
    |||||||||||  |||||| |  ||||||||||| ||||||||| ||||||||||||||    
T  41779032 tgtcatttctagccctatcccgactagtcttaccccacatccaacgcaacattctcatc 41779090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 119 - 173
Target Start/End: Original strand, 41779521 - 41779575
Alignment:
Q  119 gtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctac 173  Q
    ||||||||||||||| ||||||||||||||  | | |||||||||| ||||||||    
T  41779521 gtcttctctctacatgatcaaaccacctaagtcgagtttccaccattttttctac 41779575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 184
Target Start/End: Complemental strand, 2610657 - 2610592
Alignment:
Q  119 gtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgcta 184  Q
    |||||||||||||||   ||||||| |||| ||||||||| |||| |||||| ||| |||||||||    
T  2610657 gtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttccactataggtgcta 2610592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 184
Target Start/End: Original strand, 3243866 - 3243931
Alignment:
Q  119 gtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgcta 184  Q
    |||||||||||||||   ||||||| |||| ||||||||||| || ||||| |||| |||||||||    
T  3243866 gtcttctctctacattcccaaaccatctaagcctattttccatcaacttttttactataggtgcta 3243931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 184
Target Start/End: Original strand, 38452898 - 38452963
Alignment:
Q  119 gtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgcta 184  Q
    |||||||||||||||   ||||||| |||| ||||||||| |||| |||||||||| ||| |||||    
T  38452898 gtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactatagatgcta 38452963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 183
Target Start/End: Complemental strand, 38860223 - 38860178
Alignment:
Q  138 aaaccacctaaacctattttccaccatcttttctactttaggtgct 183  Q
    ||||||||||| |||||||||||| |||||||||||| | ||||||    
T  38860223 aaaccacctaagcctattttccacaatcttttctactatgggtgct 38860178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 174
Target Start/End: Complemental strand, 41858850 - 41858745
Alignment:
Q  69 gatcagactatcctcaatttgatatactctctttcctacaaaatctataagtcttctctctacataatcaaaccacctaaacctattttccaccatcttt 168  Q
    |||| |||||||||| ||  ||| |||| ||||| ||| | || ||| | |||||||||||||||   ||||||| |||| || | ||||||||||||||    
T  41858850 gatctgactatcctctatccgatctactttctttactagagaacctacatgtcttctctctacatgtccaaaccatctaagcccagtttccaccatcttt 41858751  T
Q  169 tctact 174  Q
    ||||||    
T  41858750 tctact 41858745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 209 - 261
Target Start/End: Original strand, 9579000 - 9579052
Alignment:
Q  209 ttgtcatttctaatcctatctcatctagtcttaccacacatccaatgcaacat 261  Q
    ||||||||| |||| |||||  ||||| ||||||||||||||||| |||||||    
T  9579000 ttgtcatttttaattctatcatatctattcttaccacacatccaacgcaacat 9579052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 209 - 253
Target Start/End: Complemental strand, 17581451 - 17581407
Alignment:
Q  209 ttgtcatttctaatcctatctcatctagtcttaccacacatccaa 253  Q
    ||||||||| ||||| ||||  |||||||||||||||||||||||    
T  17581451 ttgtcatttttaatcttatcatatctagtcttaccacacatccaa 17581407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 88 - 184
Target Start/End: Complemental strand, 44411812 - 44411716
Alignment:
Q  88 tgatatactctctttcctacaaaatctataagtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgcta 184  Q
    |||| |||||||||| || ||| | ||| |||||||||||  ||||    |||||||  || ||||||||||||||||||| ||||| |||||||||    
T  44411812 tgatctactctctttactgcaacagctacaagtcttctctaaacatgtcaaaaccacggaagcctattttccaccatctttcctactataggtgcta 44411716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 69; Significance: 6e-31; HSPs: 72)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 85 - 268
Target Start/End: Complemental strand, 54470310 - 54470131
Alignment:
Q  85 atttgatatactctctttcctacaaaatctataagtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgcta 184  Q
    ||||||| ||||||| || ||||| ||| || | |||||||||||||||   |||||||| |||  ||| |||||||||||||||||||| |||||||||    
T  54470310 atttgatttactctccttactacataatttacatgtcttctctctacatgcccaaaccacttaagtctagtttccaccatcttttctactataggtgcta 54470211  T
Q  185 tgctaccccaattttctctctaat-ttgtcatttctaatcctatctcatctagtcttaccacacatccaatgcaacattctcatc 268  Q
         |||||| | |||||||||| |||| ||||| |||| |||| |||||||||||||||||||||||||||||||| ||||||    
T  54470210 -----ccccaactctctctctaatgttgttatttcaaatcatatcccatctagtcttaccacacatccaatgcaacatcctcatc 54470131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 62 - 261
Target Start/End: Complemental strand, 33710050 - 33709850
Alignment:
Q  62 ctctagtgatcagactatcctcaatttgatatactctctttcctacaaaatctataagtcttctctctacataatcaaaccacctaaacctattttccac 161  Q
    ||||||||||| ||||| ||||  | ||||  ||||||||| ||||| |||| | |  ||||||||| ||||    |||||||||||||||| |||||||    
T  33710050 ctctagtgatctgactaccctccttctgatccactctctttactacagaatccacagttcttctctccacatgcctaaaccacctaaacctagtttccac 33709951  T
Q  162 catcttttctactttaggtgctatgctaccccaattttctctctaat-ttgtcatttctaatcctatc---tca--tctagtcttaccacacatccaatg 255  Q
    ||||||||||||| ||||     || |||||||| | |||||||||| ||| ||||||||||||||||   |||  |||||||||||||||||||||| |    
T  33709950 catcttttctactatagg-----tgttaccccaactctctctctaatgttgccatttctaatcctatcctatcatgtctagtcttaccacacatccaacg 33709856  T
Q  256 caacat 261  Q
    ||||||    
T  33709855 caacat 33709850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 61 - 280
Target Start/End: Complemental strand, 29398945 - 29398730
Alignment:
Q  61 cctctagtgatcagactatcctcaatttgatatactctctttcctacaaaatctataagtcttctctctacataatcaaaccacctaaacctattttcca 160  Q
    |||||||||||  |||||||||| ||  | | ||||||| |  ||||| |||||||| |||||||||||||||   |||||||| ||| | |||||||||    
T  29398945 cctctagtgatttgactatcctctatccggtctactctcctcactacagaatctataggtcttctctctacatgcccaaaccacataagcatattttcca 29398846  T
Q  161 ccatcttttctactttaggtgctatgctaccccaattttctctctaat-ttgtcatttctaatcctatctcatctagtcttaccacacatccaatgcaac 259  Q
    |||||||||||||  ||||||||||     | ||| | | || ||||| ||||||||| |||||| ||  |||||| |||||||||| |||||| |||||    
T  29398845 ccatcttttctaccataggtgctat-----cgcaactctttccctaatattgtcatttgtaatccaattccatctaatcttaccacaaatccaa-gcaac 29398752  T
Q  260 attctcatc-ccgctacactta 280  Q
    || |||||| ||||||||||||    
T  29398751 atcctcatctccgctacactta 29398730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 119 - 280
Target Start/End: Original strand, 31960027 - 31960185
Alignment:
Q  119 gtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgctatgctaccccaattttctctctaatt-tgtcattt 217  Q
    |||||||||||||||   ||||||| |||| ||||||||| |||| |||||||||| |||||||||     |||| | | ||||||||||  |||||||     
T  31960027 gtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgcta-----cccccactctctctctaatggtgtcattc 31960121  T
Q  218 ctaatcctatctcatctagtcttaccacacatccaatgcaacattctcatc-ccgctacactta 280  Q
    |||||||||||   |||||||||||||| ||||||| ||||||| |||||| | ||||||||||    
T  31960122 ctaatcctatcctgtctagtcttaccactcatccaacgcaacatcctcatctctgctacactta 31960185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 119 - 250
Target Start/End: Original strand, 51252674 - 51252799
Alignment:
Q  119 gtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgctatgctaccccaattttctctctaat-ttgtcattt 217  Q
    |||||||||||||||   || ||||||||| |||| ||||||||||||||||||||  |||     |||||||||||   |||||||||| | |||||||    
T  51252674 gtcttctctctacatgcccataccacctaagcctagtttccaccatcttttctactagagg-----tgctaccccaa--ctctctctaatgtagtcattt 51252766  T
Q  218 ctaatcctatctcatctagtcttaccacacatc 250  Q
    ||||||||||||| ||||||||||| |||||||    
T  51252767 ctaatcctatctcgtctagtcttacgacacatc 51252799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 209 - 269
Target Start/End: Complemental strand, 2588964 - 2588904
Alignment:
Q  209 ttgtcatttctaatcctatctcatctagtcttaccacacatccaatgcaacattctcatcc 269  Q
    |||||||||||||||||||| | |||||||||||||||||||||| ||||||| |||||||    
T  2588964 ttgtcatttctaatcctatcccttctagtcttaccacacatccaacgcaacatcctcatcc 2588904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 74 - 174
Target Start/End: Complemental strand, 47611841 - 47611741
Alignment:
Q  74 gactatcctcaatttgatatactctctttcctacaaaatctataagtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctac 173  Q
    |||| ||||| || |||| ||||||| ||  |||||||||| || |||||||||||||||   |||||||||||| ||||||||||| ||||||||||||    
T  47611841 gactctcctccatctgatttactctccttattacaaaatctctaggtcttctctctacatgcccaaaccacctaagcctattttccatcatcttttctac 47611742  T
Q  174 t 174  Q
    |    
T  47611741 t 47611741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 77 - 184
Target Start/End: Complemental strand, 28497600 - 28497494
Alignment:
Q  77 tatcctcaatttgatatactctctttcctacaaaatctataagtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctacttt 176  Q
    ||||||| || |||| ||||||| || ||||| |||||| |||||||||||||||||   |||||||||||| ||| |||||||| ||||||||||||      
T  28497600 tatcctccatctgatctactctccttactacataatctacaagtcttctctctacatgcccaaaccacctaagcct-ttttccacaatcttttctactaa 28497502  T
Q  177 aggtgcta 184  Q
    ||||||||    
T  28497501 aggtgcta 28497494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 199 - 280
Target Start/End: Original strand, 45185305 - 45185388
Alignment:
Q  199 tctctctaat-ttgtcatttctaatcctatctcatctagtcttaccacacatccaatgcaacattctcatc-ccgctacactta 280  Q
    |||||||||| |||||||||||||| ||||||||||||||||||| ||||||||||  ||| ||||| ||| ||||||||||||    
T  45185305 tctctctaatgttgtcatttctaattctatctcatctagtcttactacacatccaacacaatattcttatcaccgctacactta 45185388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 209 - 266
Target Start/End: Original strand, 17668410 - 17668467
Alignment:
Q  209 ttgtcatttctaatcctatctcatctagtcttaccacacatccaatgcaacattctca 266  Q
    ||||||||| ||||| ||||||||||||| ||||||||||||||| ||||||||||||    
T  17668410 ttgtcatttataatcttatctcatctagttttaccacacatccaacgcaacattctca 17668467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 111 - 184
Target Start/End: Complemental strand, 28236260 - 28236187
Alignment:
Q  111 atctataagtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgcta 184  Q
    ||||| |||||||||||||||||   ||||||| |||| |||||||||||||| |||||||||| |||||||||    
T  28236260 atctacaagtcttctctctacatgcccaaaccatctaagcctattttccaccaacttttctactataggtgcta 28236187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 65 - 251
Target Start/End: Complemental strand, 50662511 - 50662330
Alignment:
Q  65 tagtgatcagactatcctcaatttgatatactctctttcctacaaaatctataagtcttctctctacataatcaaa-ccacctaaacctattttccacca 163  Q
    ||||||||  ||||||||  ||| ||| ||||||| || | | | |||||| |||||||||||||||||   |||| |||||||| |||| |||||||||    
T  50662511 tagtgatctaactatccttcattagatctactctccttacaatagaatctacaagtcttctctctacatgcccaaaaccacctaagcctactttccacca 50662412  T
Q  164 tcttttctactttaggtgctatgctaccccaattttctctctaat-ttgtcatttctaatcctatctcatctagtcttaccacacatcc 251  Q
    ||||||||||| ||||||      |  |||||   ||||||||||  ||||||||| ||||||||||||| ||||||||||||||||||    
T  50662411 tcttttctactataggtg------ttgcccaa-actctctctaatgctgtcatttccaatcctatctcatatagtcttaccacacatcc 50662330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 108 - 184
Target Start/End: Original strand, 30621406 - 30621482
Alignment:
Q  108 aaaatctataagtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgcta 184  Q
    |||||||| || |||||||||||| |   |||| ||||||||||||||||||||||||||||||||| || ||||||    
T  30621406 aaaatctacaaatcttctctctacgtgcccaaatcacctaaacctattttccaccatcttttctactataagtgcta 30621482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 110 - 182
Target Start/End: Original strand, 42639224 - 42639296
Alignment:
Q  110 aatctataagtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgc 182  Q
    |||| |||||||||||||||||||   |||||||||||| |||  |||||||||||||||||||| |||||||    
T  42639224 aatccataagtcttctctctacatgtccaaaccacctaagcctggtttccaccatcttttctactataggtgc 42639296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 68 - 180
Target Start/End: Complemental strand, 56225186 - 56225074
Alignment:
Q  68 tgatcagactatcctcaatttgatatactctctttcctacaaaatctataagtcttctctctacataatcaaaccacctaaacctattttccaccatctt 167  Q
    |||| ||||| ||||| || |||||||||||   | |||||| ||||||    |||||||||||||| ||||||||||||| ||||||||| ||||||||    
T  56225186 tgattagactctcctccatatgatatactctacgtactacaacatctatgttccttctctctacatactcaaaccacctaagcctattttctaccatctt 56225087  T
Q  168 ttctactttaggt 180  Q
    || |||| |||||    
T  56225086 ttatactataggt 56225074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 200 - 254
Target Start/End: Complemental strand, 10209031 - 10208976
Alignment:
Q  200 ctctctaat-ttgtcatttctaatcctatctcatctagtcttaccacacatccaat 254  Q
    ||||||||| |||||||||||||| ||||| |||||||||||||||||||||||||    
T  10209031 ctctctaatgttgtcatttctaattctatcccatctagtcttaccacacatccaat 10208976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 61 - 148
Target Start/End: Original strand, 13805420 - 13805507
Alignment:
Q  61 cctctagtgatcagactatcctcaatttgatatactctctttcctacaaaatctataagtcttctctctacataatcaaaccacctaa 148  Q
    |||||||||||| ||| |||||| || |||| || |||| || |||||||||||| | ||||||||||||||||  ||||||||||||    
T  13805420 cctctagtgatctgacaatcctccatgtgatctagtctccttgctacaaaatctaaaggtcttctctctacatacccaaaccacctaa 13805507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 73 - 175
Target Start/End: Original strand, 45185194 - 45185296
Alignment:
Q  73 agactatcctcaatttgatatactctctttcctacaaaatctataagtcttctctctacataatcaaaccacctaaacctattttccaccatcttttcta 172  Q
    |||||||| || || | |||||||||  || |||||||||||| ||||||| |||||| ||   |||| ||||||| |||||| ||||||||||||||||    
T  45185194 agactatcttccatctcatatactcttcttactacaaaatctacaagtcttgtctctatatgcccaaatcacctaagcctattatccaccatcttttcta 45185293  T
Q  173 ctt 175  Q
    |||    
T  45185294 ctt 45185296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 119 - 268
Target Start/End: Complemental strand, 56375359 - 56375214
Alignment:
Q  119 gtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgctatgctaccccaattttctctctaatt-tgtcattt 217  Q
    |||||||||||||||   ||||||| |||| ||| ||||| |||| |||||||| | |||||||||     |||| | | ||||||||||  |||||||     
T  56375359 gtcttctctctacatgcccaaaccatctaagcctgttttctaccaacttttctattataggtgcta-----cccctactctctctctaatggtgtcattc 56375265  T
Q  218 ctaatcctatctcatctagtcttaccacacatccaatgcaacattctcatc 268  Q
    |||||| |||||  |||||||||||||| ||||||| ||||||| ||||||    
T  56375264 ctaatcttatcttgtctagtcttaccactcatccaacgcaacatcctcatc 56375214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 145 - 280
Target Start/End: Complemental strand, 12494793 - 12494661
Alignment:
Q  145 ctaaacctattttccaccatcttttctactttaggtgctatgctaccccaattttctctctaatt-tgtcatttctaatcctatctcatctagtcttacc 243  Q
    |||| ||||||||| |||| |||||||||| |||||||||     |||| | | ||||||||||  ||||||| |||||||||||   ||||||||||||    
T  12494793 ctaagcctattttctaccaacttttctactataggtgcta-----cccccactctctctctaatggtgtcattcctaatcctatcatgtctagtcttacc 12494699  T
Q  244 acacatccaatgcaacattctcatc-ccgctacactta 280  Q
    || ||||||| ||||||| |||||| | ||||||||||    
T  12494698 actcatccaacgcaacatcctcatctctgctacactta 12494661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 209 - 270
Target Start/End: Original strand, 17666341 - 17666402
Alignment:
Q  209 ttgtcatttctaatcctatctcatctagtcttaccacacatccaatgcaacattctcatccc 270  Q
    ||||||| | ||||| ||||||||||||| |||||||||||| |||||||||||| ||||||    
T  17666341 ttgtcatatataatcttatctcatctagttttaccacacatcaaatgcaacattcacatccc 17666402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 201 - 261
Target Start/End: Original strand, 20105761 - 20105822
Alignment:
Q  201 tctctaat-ttgtcatttctaatcctatctcatctagtcttaccacacatccaatgcaacat 261  Q
    |||||||| ||||||||||||||| |||||| |||||||||||||||||||||  |||||||    
T  20105761 tctctaatgttgtcatttctaatcatatctcgtctagtcttaccacacatccatcgcaacat 20105822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 211 - 267
Target Start/End: Complemental strand, 17900461 - 17900405
Alignment:
Q  211 gtcatttctaatcctatctcatctagtcttaccacacatccaatgcaacattctcat 267  Q
    ||||||||||||  |||| |||||||||||||||||||||||| ||||||| |||||    
T  17900461 gtcatttctaattttatcccatctagtcttaccacacatccaacgcaacatcctcat 17900405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 119 - 280
Target Start/End: Original strand, 23906508 - 23906672
Alignment:
Q  119 gtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgcta-tgctaccccaattttctctctaat-ttgtcatt 216  Q
    |||||||||||||||  |||||||| |||| ||||||||| || | |||||||||| |||||||||   | || |    | ||||||||||  |||||||    
T  23906508 gtcttctctctacatgctcaaaccatctaagcctattttctacaaacttttctactataggtgctacccccactctctctctctctctaatggtgtcatt 23906607  T
Q  217 tctaatcctatctcatctagtcttaccacacatccaatgcaacattctcatc-ccgctacactta 280  Q
     ||||||||||||  ||||||||| |||| ||||||| ||||||| |||||| | ||||||||||    
T  23906608 cctaatcctatcttgtctagtcttgccactcatccaacgcaacatcctcatctctgctacactta 23906672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 120 - 184
Target Start/End: Complemental strand, 31459098 - 31459034
Alignment:
Q  120 tcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgcta 184  Q
    |||||||| |||||   |||||||||||| ||||||||| ||||||||||||||| |||||||||    
T  31459098 tcttctctttacatgcccaaaccacctaagcctattttctaccatcttttctactataggtgcta 31459034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 104 - 172
Target Start/End: Original strand, 38903918 - 38903986
Alignment:
Q  104 ctacaaaatctataagtcttctctctacataatcaaaccacctaaacctattttccaccatcttttcta 172  Q
    |||||||||||| |||||||||||| ||||  |||||||| |||| || | ||||||||||||||||||    
T  38903918 ctacaaaatctacaagtcttctctccacatgctcaaaccaactaagccgagtttccaccatcttttcta 38903986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 104 - 184
Target Start/End: Complemental strand, 41192920 - 41192840
Alignment:
Q  104 ctacaaaatctataagtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgcta 184  Q
    ||||| |||||| | |||||||||||||||   |||| |||||||  ||| |||||||||||||||||||| |||||||||    
T  41192920 ctacagaatctacaggtcttctctctacatgcacaaatcacctaagtctagtttccaccatcttttctactgtaggtgcta 41192840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 119 - 280
Target Start/End: Complemental strand, 43433993 - 43433829
Alignment:
Q  119 gtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgcta-tgctaccccaattttctctctaat-ttgtcatt 216  Q
    |||||||||||||||   ||||||| |||| ||||||||| |||| |||||||||| |||||||||   | || |    | ||||||||||  |||||||    
T  43433993 gtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctacccccactctctctctctctctaatggtgtcatt 43433894  T
Q  217 tctaatcctatctcatctagtcttaccacacatccaatgcaacattctcatc-ccgctacactta 280  Q
     ||||||||||||  ||||||||| |||| ||||||| ||||||| |||||| | ||||||||||    
T  43433893 cctaatcctatcttgtctagtcttgccactcatccaacgcaacatcctcatctctgctacactta 43433829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 88 - 184
Target Start/End: Complemental strand, 43562787 - 43562691
Alignment:
Q  88 tgatatactctctttcctacaaaatctataagtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgcta 184  Q
    |||||| |||| ||| |||||||||| |||  | |||||||||| |  ||||||||||||| |||| ||| ||| || |||||||||||||||||||    
T  43562787 tgatatgctctttttactacaaaatccatagattttctctctacttggtcaaaccacctaaccctagttttcacaatattttctactttaggtgcta 43562691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 119 - 280
Target Start/End: Original strand, 48622756 - 48622912
Alignment:
Q  119 gtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgctatgctaccccaattttctctctaatt-tgtcattt 217  Q
    |||||||||||||||   ||||||| |||| ||||||||| |||| |||||||||| | |||||||     ||||| |   |||||||||  |||||||     
T  48622756 gtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactatgggtgctac----ccccact---ctctctaatggtgtcattc 48622848  T
Q  218 ctaatcctatctcatctagtcttaccacacatccaatgcaacattctcatc-ccgctacactta 280  Q
    |||||||||||   |||||||||||||| ||||||| ||||||| |||||| | ||||||||||    
T  48622849 ctaatcctatcatgtctagtcttaccactcatccaaagcaacatcctcatctctgctacactta 48622912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 137 - 181
Target Start/End: Complemental strand, 49987479 - 49987435
Alignment:
Q  137 caaaccacctaaacctattttccaccatcttttctactttaggtg 181  Q
    |||||||||||| ||||||||||||||||||||||||| ||||||    
T  49987479 caaaccacctaagcctattttccaccatcttttctactataggtg 49987435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 119 - 267
Target Start/End: Complemental strand, 50471595 - 50471453
Alignment:
Q  119 gtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctact-ttaggtgctatgctaccccaattttctctctaat-ttgtcatt 216  Q
    |||||||||||||||   |||||||| |||||||| |||||||||||||||||||| ||||      ||||||||| |   |||||||||| |||||||     
T  50471595 gtcttctctctacatgcccaaaccacttaaacctagtttccaccatcttttctactattag------tgctaccccga--gtctctctaatgttgtcatc 50471504  T
Q  217 tctaatcctatctcatctagtcttaccacacatccaatgcaacattctcat 267  Q
    |||||||||||  | || ||||||| || ||||||||  ||||||||||||    
T  50471503 tctaatcctattacgtcaagtcttagcaaacatccaacacaacattctcat 50471453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 119 - 280
Target Start/End: Complemental strand, 436298 - 436140
Alignment:
Q  119 gtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgctatgctaccccaattttctctctaatt-tgtcattt 217  Q
    |||||||||||||||   |||| || |||| ||||||||| |||| |||||||||| |||||||||     |||| | | ||||||||||  |||||||     
T  436298 gtcttctctctacatgcccaaatcatctaagcctattttctaccaacttttctactataggtgcta-----cccccactctctctctaatggtgtcattc 436204  T
Q  218 ctaatcctatctcatctagtcttaccacacatccaatgcaacattctcatc-ccgctacactta 280  Q
     ||||||||||   ||||||||||| || ||||||| ||||||| |||||| | ||||||||||    
T  436203 ttaatcctatcatgtctagtcttacgactcatccaacgcaacatcctcatctctgctacactta 436140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 111 - 268
Target Start/End: Original strand, 1777222 - 1777373
Alignment:
Q  111 atctataagtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgctatgctaccccaattttctctctaat-t 209  Q
    |||||| ||||||||||||| ||   ||||||| |||| ||||||||| |||| ||||| |||| ||||||||||  | || |     ||||||||||      
T  1777222 atctatgagtcttctctctagatgtccaaaccatctaagcctattttctaccaacttttttactataggtgctat--ttccac-----tctctctaatgg 1777314  T
Q  210 tgtcatttctaatcctatctcatctagtcttaccacacatccaatgcaacattctcatc 268  Q
    ||||||| |||||||||||   |||||||||||||| ||||||| ||||||| ||||||    
T  1777315 tgtcattcctaatcctatcatgtctagtcttaccactcatccaacgcaacatcctcatc 1777373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 119 - 280
Target Start/End: Original strand, 33191061 - 33191219
Alignment:
Q  119 gtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgctatgctaccccaattttctctctaatt-tgtcattt 217  Q
    |||||||||||||||   ||||| | ||||  |||||||| |||| |||||||||| |||||||||     |||| | | ||||||||||  |||||||     
T  33191061 gtcttctctctacatgcccaaacaatctaagtctattttctaccaacttttctactataggtgcta-----cccccactctctctctaatggtgtcattc 33191155  T
Q  218 ctaatcctatctcatctagtcttaccacacatccaatgcaacattctcatc-ccgctacactta 280  Q
    |||||||||||  ||||| ||||||||| ||||||  ||||||| |||||| | ||||||||||    
T  33191156 ctaatcctatcctatctaatcttaccactcatccagcgcaacatcctcatctctgctacactta 33191219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 119 - 280
Target Start/End: Complemental strand, 33227278 - 33227120
Alignment:
Q  119 gtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgctatgctaccccaattttctctctaatt-tgtcattt 217  Q
    |||||||||||||||   ||||| | |||| ||||||||| |||| |||||||||| |||||||||     |||| | | ||||||||||  |||||||     
T  33227278 gtcttctctctacatgcccaaacaatctaagcctattttctaccaacttttctactataggtgcta-----cccccactctctctctaatggtgtcattc 33227184  T
Q  218 ctaatcctatctcatctagtcttaccacacatccaatgcaacattctcatc-ccgctacactta 280  Q
     ||||||||||   |||||||||||||| ||||||  ||||||| |||||| | ||||||||||    
T  33227183 ttaatcctatcatgtctagtcttaccactcatccagcgcaacatcctcatctctgctacactta 33227120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 280
Target Start/End: Complemental strand, 35690286 - 35690215
Alignment:
Q  210 tgtcatttctaatcctatctcatctagtcttaccacacatccaatgcaacattctcatc-ccgctacactta 280  Q
    ||||||| ||||||||||||| ||||||||||| || ||||||| ||||||| |||||| | ||||||||||    
T  35690286 tgtcattcctaatcctatctcgtctagtcttactactcatccaacgcaacatcctcatctcggctacactta 35690215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 88 - 183
Target Start/End: Original strand, 46715554 - 46715649
Alignment:
Q  88 tgatatactctctttcctacaaaatctataagtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgct 183  Q
    |||| ||||||| || ||||| |||| | | |||||||||||||||   || ||||||||| |||| |||||||||||||||||||  ||||||||    
T  46715554 tgatctactctccttgctacataatccacatgtcttctctctacatgcccacaccacctaagcctagtttccaccatcttttctacaataggtgct 46715649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 65 - 181
Target Start/End: Complemental strand, 50680863 - 50680746
Alignment:
Q  65 tagtgatcagactatcctcaatttgatatactctctttcctacaaaatctataagtcttctctctacata--atcaaaccacctaaacctattttccacc 162  Q
    ||||||||  ||||||||  ||| ||| ||||||| || ||||  |||||| ||| |||||||||||||   || ||||||||||| |||||||||||||    
T  50680863 tagtgatctaactatccttcattggatctactctccttactacggaatctacaagccttctctctacatgccat-aaaccacctaagcctattttccacc 50680765  T
Q  163 atcttttctactttaggtg 181  Q
    |||||||| ||| ||||||    
T  50680764 atcttttcaactataggtg 50680746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 119 - 253
Target Start/End: Original strand, 52569728 - 52569858
Alignment:
Q  119 gtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgctatgctaccccaattttctctctaatt-tgtcattt 217  Q
    |||||||||||||||   ||||||| |||| ||||||||| |||| |||||||||| |||||||||     |||| | | ||||||||||  |||||||     
T  52569728 gtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgcta-----cccccactctctctctaatggtgtcattc 52569822  T
Q  218 ctaatcctatctcatctagtcttaccacacatccaa 253  Q
    |||||||||||   |||||||||||| | |||||||    
T  52569823 ctaatcctatcctgtctagtcttacccctcatccaa 52569858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 61 - 148
Target Start/End: Complemental strand, 54935027 - 54934940
Alignment:
Q  61 cctctagtgatcagactatcctcaatttgatatactctctttcctacaaaatctataagtcttctctctacataatcaaaccacctaa 148  Q
    ||||||||||||  |||||| ||  |||||| ||||||| |  ||||| |||||| |||||||||||||||||| |||||||| ||||    
T  54935027 cctctagtgatctaactatcatccttttgatctactctcctcactacagaatctaaaagtcttctctctacatattcaaaccatctaa 54934940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 120 - 261
Target Start/End: Complemental strand, 37797920 - 37797783
Alignment:
Q  120 tcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgctatgctaccccaattttctctctaat-ttgtcatttc 218  Q
    ||||||||||||||   ||||||| |||| ||||||||| |||| |||||||||| ||||     ||||||| | | | ||||||||||  |||||||||    
T  37797920 tcttctctctacatgtccaaaccatctaagcctattttctaccaacttttctactatagg-----tgctacctccactctctctctaatggtgtcatttc 37797826  T
Q  219 taatcctatctcatctagtcttaccacacatccaatgcaacat 261  Q
    ||||| ||||   |||||||||| ||| ||||||| |||||||    
T  37797825 taatcttatcatgtctagtcttatcactcatccaacgcaacat 37797783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 74 - 184
Target Start/End: Complemental strand, 53707908 - 53707798
Alignment:
Q  74 gactatcctcaatttgatatactctctttcctacaaaatctataagtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctac 173  Q
    |||||||||| ||||||||||||||  || | ||   |||||   |||||||||||||||   ||||||| |||| ||||||||| |||| |||||||||    
T  53707908 gactatcctccatttgatatactcttcttaccacggcatctacgggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctac 53707809  T
Q  174 tttaggtgcta 184  Q
    | |||||||||    
T  53707808 tataggtgcta 53707798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 138 - 184
Target Start/End: Original strand, 55768733 - 55768779
Alignment:
Q  138 aaaccacctaaacctattttccaccatcttttctactttaggtgcta 184  Q
    |||||||||||||||||||||||  |||||||||||| |||||||||    
T  55768733 aaaccacctaaacctattttccatgatcttttctactataggtgcta 55768779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 138 - 184
Target Start/End: Original strand, 55832989 - 55833035
Alignment:
Q  138 aaaccacctaaacctattttccaccatcttttctactttaggtgcta 184  Q
    |||||||||||||||||||||||  |||||||||||| |||||||||    
T  55832989 aaaccacctaaacctattttccatgatcttttctactataggtgcta 55833035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 119 - 184
Target Start/End: Original strand, 26037718 - 26037783
Alignment:
Q  119 gtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgcta 184  Q
    |||||||||||| |  ||||||||| |||| ||||||||| |||| |||||||||| |||||||||    
T  26037718 gtcttctctctataatatcaaaccatctaagcctattttctaccaacttttctactataggtgcta 26037783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 201 - 253
Target Start/End: Original strand, 34233323 - 34233376
Alignment:
Q  201 tctctaat-ttgtcatttctaatcctatctcatctagtcttaccacacatccaa 253  Q
    |||||||| ||||| |||||||||||||| |||||||||||| |||||||||||    
T  34233323 tctctaatgttgtcgtttctaatcctatcacatctagtcttatcacacatccaa 34233376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 137 - 261
Target Start/End: Original strand, 44047579 - 44047699
Alignment:
Q  137 caaaccacctaaacctattttccaccatcttttctactttaggtgctatgctaccccaattttctctctaat-ttgtcatttctaatcctatctcatcta 235  Q
    |||||||||||| ||||  ||| |||| |||||||||| ||||     ||||||||||| | |||||||||| |||||||||||||| ||||| |  |||    
T  44047579 caaaccacctaagcctagattctaccaccttttctactatagg-----tgctaccccaactctctctctaatgttgtcatttctaattctatcccgccta 44047673  T
Q  236 gtcttaccacacatccaatgcaacat 261  Q
     || |||||| ||| |||||||||||    
T  44047674 atcctaccacgcattcaatgcaacat 44047699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 85 - 173
Target Start/End: Complemental strand, 31339639 - 31339552
Alignment:
Q  85 atttgatatactctctttcctacaaaatctataagtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctac 173  Q
    ||||||| |||| || || ||||| |||||| |||||||||||||||||  ||||||||||||| | || |||| ||||| ||||||||    
T  31339639 atttgatctactatccttactacataatctacaagtcttctctctacatgctcaaaccacctaagcttagtttcgaccat-ttttctac 31339552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 209 - 268
Target Start/End: Complemental strand, 21106967 - 21106908
Alignment:
Q  209 ttgtcatttctaatcctatctcatctagtcttaccacacatccaatgcaacattctcatc 268  Q
    |||||||||||||| ||||| | ||||||||||||||||||| ||  |||||| ||||||    
T  21106967 ttgtcatttctaattctatcacgtctagtcttaccacacatcgaacccaacatcctcatc 21106908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 210 - 280
Target Start/End: Original strand, 45205148 - 45205219
Alignment:
Q  210 tgtcatttctaatcctatctcatctagtcttaccacacatccaatgcaacattctcatc-ccgctacactta 280  Q
    ||||||| ||||||||||| | |||||||||||||| |||||||  |||||| |||||| ||||||| ||||    
T  45205148 tgtcattcctaatcctatcccgtctagtcttaccactcatccaacacaacatcctcatctccgctacgctta 45205219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 209 - 268
Target Start/End: Complemental strand, 45423602 - 45423543
Alignment:
Q  209 ttgtcatttctaatcctatctcatctagtcttaccacacatccaatgcaacattctcatc 268  Q
    |||||||||||||| ||||| | ||||||||||||||||| ||||  |||||| ||||||    
T  45423602 ttgtcatttctaattctatcccgtctagtcttaccacacaaccaacacaacatcctcatc 45423543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 88 - 174
Target Start/End: Original strand, 1427466 - 1427552
Alignment:
Q  88 tgatatactctctttcctacaaaatctataagtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctact 174  Q
    |||| ||||||| || | |||||||| | | ||| |||||||||||  |||||||| |||| |||| |||||||||| |||||||||    
T  1427466 tgatctactctccttaccacaaaatccacaggtcctctctctacatgctcaaaccatctaagcctagtttccaccatgttttctact 1427552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 119 - 185
Target Start/End: Original strand, 7092433 - 7092499
Alignment:
Q  119 gtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgctat 185  Q
    |||||||||||| ||   |||||||| ||||||||||||| | ||| ||||||||| ||||||||||    
T  7092433 gtcttctctctatatgcccaaaccacttaaacctattttctatcatattttctactataggtgctat 7092499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 268
Target Start/End: Complemental strand, 11389705 - 11389644
Alignment:
Q  209 ttgtcatttctaatcctatctca--tctagtcttaccacacatccaatgcaacattctcatc 268  Q
    ||||||||||||||||||| ||   |||||| |||||||||||||||| |||||| ||||||    
T  11389705 ttgtcatttctaatcctatatcccgtctagttttaccacacatccaatccaacatcctcatc 11389644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 212 - 250
Target Start/End: Complemental strand, 20998992 - 20998954
Alignment:
Q  212 tcatttctaatcctatctcatctagtcttaccacacatc 250  Q
    ||||||||||||||||||| ||||||||||| |||||||    
T  20998992 tcatttctaatcctatctcgtctagtcttacaacacatc 20998954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 110 - 184
Target Start/End: Original strand, 42293453 - 42293527
Alignment:
Q  110 aatctataagtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgcta 184  Q
    |||||| | ||| ||| ||||||||  |||||||||||| || | |||||| ||||||||||||| |||||||||    
T  42293453 aatctacatgtcgtctttctacatacccaaaccacctaagccgagtttccatcatcttttctactataggtgcta 42293527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 253
Target Start/End: Original strand, 43070053 - 43070107
Alignment:
Q  200 ctctctaat-ttgtcatttctaatcctatctcatctagtcttaccacacatccaa 253  Q
    ||||||||| ||||||||||||||||||||   |||| |||||||||||||||||    
T  43070053 ctctctaatgttgtcatttctaatcctatcctgtctaatcttaccacacatccaa 43070107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 268
Target Start/End: Original strand, 44667530 - 44667600
Alignment:
Q  199 tctctctaat-ttgtcatttctaatcctatctcatctagtcttaccacacatccaatgcaacattctcatc 268  Q
    |||||||||| |||||| ||||||| ||||||  |||||| ||||| || |||||| ||||||||||||||    
T  44667530 tctctctaatattgtcacttctaatactatcttgtctagtattaccgcatatccaacgcaacattctcatc 44667600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 213 - 267
Target Start/End: Complemental strand, 44860833 - 44860779
Alignment:
Q  213 catttctaatcctatctcatctagtcttaccacacatccaatgcaacattctcat 267  Q
    ||||||||||| |||  ||||||||||||||||||||||||  |||||| |||||    
T  44860833 catttctaatcttattccatctagtcttaccacacatccaacacaacatcctcat 44860779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 184
Target Start/End: Original strand, 20591505 - 20591578
Alignment:
Q  111 atctataagtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgcta 184  Q
    |||||| ||||||||||||||||   ||||||| |||| | ||||||| |||| |||||||||| || ||||||    
T  20591505 atctatgagtcttctctctacatgcccaaaccatctaatcttattttctaccaacttttctactataagtgcta 20591578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 184
Target Start/End: Original strand, 35555860 - 35555925
Alignment:
Q  119 gtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgcta 184  Q
    |||||||||||| ||   ||||||||||||  ||| |||| ||||||||||||||| |||||||||    
T  35555860 gtcttctctctaaatgcccaaaccacctaagtctagtttctaccatcttttctactataggtgcta 35555925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 253
Target Start/End: Original strand, 51841465 - 51841534
Alignment:
Q  185 tgctaccccaattttctctctaat-ttgtcatttctaatcctatctcatctagtcttaccacacatccaa 253  Q
    |||| |||||||| |||||||||| ||||| ||||  || ||||||  ||||||||||||||||||||||    
T  51841465 tgctgccccaattctctctctaatattgtcgtttcatattctatcttgtctagtcttaccacacatccaa 51841534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 119 - 183
Target Start/End: Complemental strand, 4440922 - 4440858
Alignment:
Q  119 gtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgct 183  Q
    |||||||||||| ||   ||||||| |||| ||||||||| |||| |||||||||| ||||||||    
T  4440922 gtcttctctctagatgcccaaaccatctaagcctattttctaccaacttttctactataggtgct 4440858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 209 - 261
Target Start/End: Complemental strand, 18966536 - 18966484
Alignment:
Q  209 ttgtcatttctaatcctatctcatctagtcttaccacacatccaatgcaacat 261  Q
    ||||||||| ||||||||| |  |||| ||||||||||||||||| |||||||    
T  18966536 ttgtcatttataatcctattttgtctaatcttaccacacatccaacgcaacat 18966484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 199 - 266
Target Start/End: Original strand, 25967555 - 25967623
Alignment:
Q  199 tctctctaattt-gtcatttctaatcctatctcatctagtcttaccacacatccaatgcaacattctca 266  Q
    |||||||||| | |||||||||||||||| |   |||||||||||||||||||||  ||||||| ||||    
T  25967555 tctctctaatgtagtcatttctaatcctaccatgtctagtcttaccacacatccatcgcaacatcctca 25967623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 137 - 181
Target Start/End: Complemental strand, 26356670 - 26356626
Alignment:
Q  137 caaaccacctaaacctattttccaccatcttttctactttaggtg 181  Q
    ||||||||||||  |||||||| ||||||||||||||| ||||||    
T  26356670 caaaccacctaagtctattttctaccatcttttctactataggtg 26356626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 119 - 183
Target Start/End: Original strand, 38570960 - 38571024
Alignment:
Q  119 gtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgct 183  Q
    ||||||| |||||||   |||||||||||| |||| ||||||| ||||||| |||| ||||||||    
T  38570960 gtcttctttctacatgcccaaaccacctaagcctagtttccactatcttttgtactataggtgct 38571024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 120 - 184
Target Start/End: Original strand, 39100749 - 39100813
Alignment:
Q  120 tcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgcta 184  Q
    ||||||||||||||  |||||||| |||| ||||||||| | || ||||||| || |||||||||    
T  39100749 tcttctctctacatgttcaaaccatctaagcctattttctatcaacttttcttctataggtgcta 39100813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 209 - 249
Target Start/End: Complemental strand, 42618857 - 42618817
Alignment:
Q  209 ttgtcatttctaatcctatctcatctagtcttaccacacat 249  Q
    |||||||||||||||||||||  ||||||||| ||||||||    
T  42618857 ttgtcatttctaatcctatcttgtctagtcttcccacacat 42618817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 209 - 253
Target Start/End: Complemental strand, 44360066 - 44360022
Alignment:
Q  209 ttgtcatttctaatcctatctcatctagtcttaccacacatccaa 253  Q
    |||||||||||||| |||||||  |||||| ||||||||||||||    
T  44360066 ttgtcatttctaattctatctcgcctagtcctaccacacatccaa 44360022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 88 - 184
Target Start/End: Original strand, 49738786 - 49738882
Alignment:
Q  88 tgatatactctctttcctacaaaatctataagtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgcta 184  Q
    |||| ||||||| ||  ||||||||||||  ||||||||| ||||   ||||| ||||||| || | |||| ||||||||||||||  |||||||||    
T  49738786 tgatttactctccttagtacaaaatctatgggtcttctctttacacgctcaaatcacctaagccgagtttctaccatcttttctacaataggtgcta 49738882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 66; Significance: 4e-29; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 61 - 268
Target Start/End: Original strand, 42510171 - 42510369
Alignment:
Q  61 cctctagtgatcagactatcctcaatttgatatactctctttcctacaaaatctataagtcttctctctacataatcaaaccacctaaacctattttcca 160  Q
    |||||||||||| |||||||||| || |||| ||||||| || | |||||||||||| |||||||||  ||||   |||||||||||| |||||||||||    
T  42510171 cctctagtgatctgactatcctccatctgatctactctccttaccacaaaatctataggtcttctct--acatgtccaaaccacctaagcctattttcca 42510268  T
Q  161 ccatcttttctactttaggtgctatgctaccccaattttctctctaat-ttgtc-atttctaatcctatctcatctagtcttaccacacatccaatgcaa 258  Q
    | |||||||||||| ||||||||||     |||||    ||| ||| | || || |||||||| |||||| |||||||||||||||||||||||||||||    
T  42510269 ctatcttttctactataggtgctat-----cccaa----ctccctagtattatcaatttctaaacctatcccatctagtcttaccacacatccaatgcaa 42510359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 74 - 249
Target Start/End: Original strand, 39600849 - 39601020
Alignment:
Q  74 gactatcctcaatttgatatactctctttcctacaaaatctataagtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctac 173  Q
    |||||||||| || |||| ||||||| |  ||||| |||||| | ||||||||| |||||    ||||||||||| | | ||||||||||||||||||||    
T  39600849 gactatcctcgatctgatctactctcctcgctacagaatctacaggtcttctctttacatgccaaaaccacctaagcttgttttccaccatcttttctac 39600948  T
Q  174 tttaggtgctatgctaccccaattttctctctaat-ttgtcatttctaatcctatctcatctagtcttaccacacat 249  Q
    | ||||     | ||||||||| | |||||||||| ||||||||||||||| |||| ||||||||||||||||||||    
T  39600949 tatagg-----tactaccccaactctctctctaatgttgtcatttctaatcttatcccatctagtcttaccacacat 39601020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 80 - 260
Target Start/End: Original strand, 36820135 - 36820309
Alignment:
Q  80 cctcaatttgatatactctctttcctacaaaatctataagtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttagg 179  Q
    |||| ||||||| ||| ||| || ||||| |||||||  ||||||||| |||||    ||||||||||| |||| |||||||||||||| ||| | ||||    
T  36820135 cctctatttgatctaccctccttactacataatctatgggtcttctctttacatgtctaaaccacctaagcctagtttccaccatctttgctaatatagg 36820234  T
Q  180 tgctatgctaccccaattttctctctaattt-gtcatttctaatcctatctcatctagtcttaccacacatccaatgcaaca 260  Q
    |||||     |||||| |  ||||||||| | |||||||||||||||||||| |||||||||||||||||||||| ||||||    
T  36820235 tgcta-----ccccaact--ctctctaatgtcgtcatttctaatcctatctcgtctagtcttaccacacatccaacgcaaca 36820309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 79 - 253
Target Start/End: Complemental strand, 19737106 - 19736935
Alignment:
Q  79 tcctcaatttgatatactctctttcctacaaaatctataagtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttag 178  Q
    ||||| || |||| ||||||  || |||||| ||||| | ||||||||||| |||  ||||||||||||||||||||||| ||||||||||||||| |||    
T  19737106 tcctccatctgatctactcttcttactacaacatctacaggtcttctctctgcatgctcaaaccacctaaacctattttctaccatcttttctactatag 19737007  T
Q  179 gtgctatgctaccccaattttctctctaat-ttgtcatttctaatcctatctcatctagtcttaccacacatccaa 253  Q
    ||||  |||  |||||| | ||||||||||  | ||| |||||||| |||| | |||||||||||||| |||||||    
T  19737006 gtgc--tgc--ccccaactctctctctaatgatttcacttctaatcgtatcccgtctagtcttaccactcatccaa 19736935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 79 - 253
Target Start/End: Complemental strand, 19758009 - 19757838
Alignment:
Q  79 tcctcaatttgatatactctctttcctacaaaatctataagtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttag 178  Q
    ||||| || |||| ||||||  || |||||| ||||| | ||||||||||| |||  ||||||||||||||||||||||| ||||||||||||||| |||    
T  19758009 tcctccatctgatctactcttcttactacaacatctacaggtcttctctctgcatgctcaaaccacctaaacctattttctaccatcttttctactatag 19757910  T
Q  179 gtgctatgctaccccaattttctctctaat-ttgtcatttctaatcctatctcatctagtcttaccacacatccaa 253  Q
    ||||  |||  |||||| | ||||||||||  | ||| |||||||| |||||| | |||||||||||| |||||||    
T  19757909 gtgc--tgc--ccccaactctctctctaatgatttcacttctaatcgtatctcgtgtagtcttaccactcatccaa 19757838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 75 - 250
Target Start/End: Original strand, 45289260 - 45289434
Alignment:
Q  75 actatcctcaatttgatatactctctttcctacaaaatctataagtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctact 174  Q
    ||||||||| || |||| ||||||  || |||||||||||| |||| |||||||||| |   |||||||||||| |||||||||||||||||||||||||    
T  45289260 actatcctccatctgatctactcttcttactacaaaatctacaagtgttctctctacgtgcccaaaccacctaagcctattttccaccatcttttctact 45289359  T
Q  175 --ttaggtgctatgctaccccaa--ttttctctctaatttgtcatttctaatcctatctcatctagtcttaccacacatc 250  Q
       ||||     |||||||||||   | |||||||||| |||||||||||||| |||| | |||||||||| ||||||||    
T  45289360 gaatagg-----tgctaccccaactctctctctctaatgtgtcatttctaatcttatcccgtctagtcttatcacacatc 45289434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 65 - 184
Target Start/End: Original strand, 41842670 - 41842789
Alignment:
Q  65 tagtgatcagactatcctcaatttgatatactctctttcctacaaaatctataagtcttctctctacataatcaaaccacctaaacctattttccaccat 164  Q
    |||||||| |||||||||| ||||||| ||||||| || ||||| ||||||    |||||||||||||||  ||||||||||||  ||  ||||||||||    
T  41842670 tagtgatctgactatcctccatttgatctactctcattactacagaatctaccgctcttctctctacatacccaaaccacctaagactggtttccaccat 41842769  T
Q  165 cttttctactttaggtgcta 184  Q
    |||||||||| |||||||||    
T  41842770 cttttctactataggtgcta 41842789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 105 - 259
Target Start/End: Original strand, 49503753 - 49503903
Alignment:
Q  105 tacaaaatctataagtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgctatgctaccccaattttctctc 204  Q
    ||||| ||||||  |||||||||||||||   |||||||||||| ||||||||| ||||||||||||||| ||||     |||||||  || | ||||||    
T  49503753 tacaacatctattggtcttctctctacatgcccaaaccacctaagcctattttctaccatcttttctactatagg-----tgctacctgaactctctctc 49503847  T
Q  205 taat-ttgtcatttctaatcctatctcatctagtcttaccacacatccaatgcaac 259  Q
    ||||  ||||||| | ||||||||||| |||||||||||||| |||||||| ||||    
T  49503848 taatggtgtcattcccaatcctatctcgtctagtcttaccactcatccaatccaac 49503903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 119 - 280
Target Start/End: Complemental strand, 52138869 - 52138711
Alignment:
Q  119 gtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgctatgctaccccaattttctctctaatt-tgtcattt 217  Q
    |||||||||||||||   ||||||| |||| ||||||||| |||| |||||||||| |||||||||     |||| | | ||||||||||  |||||||     
T  52138869 gtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgcta-----cccccactctctctctaatggtgtcattc 52138775  T
Q  218 ctaatcctatctcatctagtcttaccacacatccaatgcaacattctcatc-ccgctacactta 280  Q
    |||||||||||   |||||||||||||| ||||||| ||||||| |||||| | ||||||||||    
T  52138774 ctaatcctatcatgtctagtcttaccactcatccaacgcaacatcctcatctctgctacactta 52138711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 119 - 268
Target Start/End: Complemental strand, 49841688 - 49841535
Alignment:
Q  119 gtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgctatg-ctaccccaattttctctc--taat-ttgtca 214  Q
    ||||||||||||||    |||||||||| |  ||| |||||||||||||||||| | ||||||||| | ||||||||| | ||||||  |||| ||||||    
T  49841688 gtcttctctctacacgcccaaaccaccttagtctagtttccaccatcttttctaatataggtgctacggctaccccaactctctctcactaatgttgtca 49841589  T
Q  215 tttctaatcctatctcatctagtcttaccacacatccaatgcaacattctcatc 268  Q
    ||||||||| || ||| ||||||||||| ||||||||||  |||||| ||||||    
T  49841588 tttctaatcttacctcgtctagtcttactacacatccaacacaacatcctcatc 49841535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 61 - 253
Target Start/End: Original strand, 344866 - 345054
Alignment:
Q  61 cctctagtgatcagactatcctcaatttgatatactctctttcctacaaaatctataagtcttctctctacataatcaaaccacctaaacctattttcca 160  Q
    ||||| || ||| |||||||||| ||  ||| ||| ||| || ||| ||||| || | ||| ||||||||||| | ||||| || ||| ||||||||| |    
T  344866 cctcttgtaatctgactatcctccatccgatctacgctcattactaaaaaatttacaggtcctctctctacatgaccaaactacttaagcctattttcta 344965  T
Q  161 ccatcttttctactttaggtgctatgctaccccaattttctctctaatttg-tcatttctaatcctatctcatctagtcttaccacacatccaa 253  Q
     ||||||||||||| || ||||||     |||||| | |||||||||| |  ||||||||||||||||||| ||||||||||||||| ||||||    
T  344966 acatcttttctactataagtgcta-----ccccaactctctctctaatgtcatcatttctaatcctatctcgtctagtcttaccacaaatccaa 345054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 136 - 253
Target Start/End: Original strand, 31337756 - 31337867
Alignment:
Q  136 tcaaaccacctaaacctattttccaccatcttttctactttaggtgctatgctaccccaattttctctctaatt-tgtcatttctaatcctatctcatct 234  Q
    ||||||||| ||| |||| |||| ||||||||||||||| |||||||||      ||||| ||||||||||||  |||||||| |||||||||| |||||    
T  31337756 tcaaaccacttaagcctagtttcaaccatcttttctactataggtgcta------cccaactttctctctaatgctgtcattt-taatcctatcccatct 31337848  T
Q  235 agtcttaccacacatccaa 253  Q
    ||||||| |||||||||||    
T  31337849 agtcttatcacacatccaa 31337867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 119 - 280
Target Start/End: Original strand, 47233809 - 47233967
Alignment:
Q  119 gtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgctatgctaccccaattttctctctaatt-tgtcattt 217  Q
    |||||||||||||||   ||||||| |||| ||||||||| |||| |||||||||| |||||||||     || | ||| ||||||||||  ||||||||    
T  47233809 gtcttctctctacatgtccaaaccatctaagcctattttctaccaacttttctactataggtgcta-----cctccattctctctctaatggtgtcattt 47233903  T
Q  218 ctaatcctatctcatctagtcttaccacacatccaatgcaacattctcatc-ccgctacactta 280  Q
    |||||| ||||   |||||||||||||| ||||||| |||| || ||||||  |||||||||||    
T  47233904 ctaatcttatcatgtctagtcttaccactcatccaacgcaatatcctcatcttcgctacactta 47233967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 119 - 268
Target Start/End: Complemental strand, 54128447 - 54128302
Alignment:
Q  119 gtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgctatgctaccccaattttctctctaat-ttgtcattt 217  Q
    ||||| |||||||||   |||||||||||| ||||||||| ||||||||||||||| ||||     |||||||||||   ||||||||||  |||||||     
T  54128447 gtcttttctctacatgcccaaaccacctaagcctattttctaccatcttttctactatagg-----tgctaccccaacactctctctaatggtgtcattc 54128353  T
Q  218 ctaatcctatctcatctagtcttaccacacatccaatgcaacattctcatc 268  Q
     |||||||||| | |||||| ||||||| |||| || ||||||| ||||||    
T  54128352 ataatcctatcgcgtctagttttaccactcatcaaacgcaacatcctcatc 54128302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 119 - 184
Target Start/End: Original strand, 50960846 - 50960911
Alignment:
Q  119 gtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgcta 184  Q
    |||||||||||||||   |||||||||||| ||||||||| ||||||||||||||| |||||||||    
T  50960846 gtcttctctctacatgcccaaaccacctaagcctattttctaccatcttttctactataggtgcta 50960911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 199 - 280
Target Start/End: Original strand, 50621648 - 50621731
Alignment:
Q  199 tctctctaat-ttgtcatttctaatcctatctcatctagtcttaccacacatccaatgcaacattctcatc-ccgctacactta 280  Q
    |||||||||| ||||||||||||||||||||     ||||||||||||| ||| ||||||||||||||||| ||||||||||||    
T  50621648 tctctctaatgttgtcatttctaatcctatcattcatagtcttaccacatatcaaatgcaacattctcatctccgctacactta 50621731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 120 - 280
Target Start/End: Original strand, 51447924 - 51448080
Alignment:
Q  120 tcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgctatgctaccccaattttctctctaatt-tgtcatttc 218  Q
    ||||||||||||||   ||||| | |||| ||||||||| |||| |||||||||| |||||||||  |||| |      ||||||||||  ||||||| |    
T  51447924 tcttctctctacatgcccaaactatctaagcctattttctaccaacttttctactataggtgctaccctactc------tctctctaatggtgtcattcc 51448017  T
Q  219 taatcctatctcatctagtcttaccacacatccaatgcaacattctcatc-ccgctacactta 280  Q
    ||||||||||   |||||||||||||| ||||||| ||||||| |||||| | ||||||||||    
T  51448018 taatcctatcctgtctagtcttaccactcatccaacgcaacatcctcatctctgctacactta 51448080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 199 - 268
Target Start/End: Original strand, 38054625 - 38054695
Alignment:
Q  199 tctctctaat-ttgtcatttctaatcctatctcatctagtcttaccacacatccaatgcaacattctcatc 268  Q
    |||||||||| || ||||||||||||||||| | |||||||||||||| ||| ||| ||||||||||||||    
T  38054625 tctctctaatgttatcatttctaatcctatcccgtctagtcttaccacccattcaacgcaacattctcatc 38054695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 200 - 268
Target Start/End: Original strand, 2341003 - 2341072
Alignment:
Q  200 ctctctaat-ttgtcatttctaatcctatctcatctagtcttaccacacatccaatgcaacattctcatc 268  Q
    ||||||||| || ||||||||||| |||||   |||||||||||||||||||||||||||||| ||||||    
T  2341003 ctctctaatgttttcatttctaattctatcatgtctagtcttaccacacatccaatgcaacatcctcatc 2341072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 63 - 148
Target Start/End: Original strand, 30572956 - 30573040
Alignment:
Q  63 tctagtgatcagactatcctcaatttgatatactctctttcctacaaaatctataagtcttctctctacataatcaaaccacctaa 148  Q
    |||||||| | |||||||||| || |||| || |||| || ||||| |||||||| ||||||||||||||| ||||||||||||||    
T  30572956 tctagtgagctgactatcctccatctgatcta-tctccttactacataatctataggtcttctctctacatgatcaaaccacctaa 30573040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 104 - 172
Target Start/End: Complemental strand, 39235222 - 39235154
Alignment:
Q  104 ctacaaaatctataagtcttctctctacataatcaaaccacctaaacctattttccaccatcttttcta 172  Q
    |||||| ||||| | |||||||||||||||   |||||||||||| ||||||||| |||||||||||||    
T  39235222 ctacaacatctacaggtcttctctctacatgcccaaaccacctaagcctattttctaccatcttttcta 39235154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 174
Target Start/End: Complemental strand, 21200724 - 21200562
Alignment:
Q  18 tagatcttgctcaatagtttgtcttataatttttcaaggaattcctct------agtgatcagactatcctcaatttgatatactctctttcctacaaaa 111  Q
    |||||||| || |||||||||||| ||| |||||| |||  |||||||      ||||||  |||||  ||| || |||| ||||||| || || || ||    
T  21200724 tagatctttctaaatagtttgtctaatagtttttctaggtcttcctctccccctagtgatttgactactctccatgtgatctactctccttactgcagaa 21200625  T
Q  112 tctataagtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctact 174  Q
    |||| | |||||||||||||||   ||||||||||||  ||| ||||||||||||||||||||    
T  21200624 tctacatgtcttctctctacatgcccaaaccacctaagtctagtttccaccatcttttctact 21200562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 137 - 184
Target Start/End: Complemental strand, 26490366 - 26490319
Alignment:
Q  137 caaaccacctaaacctattttccaccatcttttctactttaggtgcta 184  Q
    |||||||||||| ||||||||| ||||||||||||||| |||||||||    
T  26490366 caaaccacctaagcctattttctaccatcttttctactataggtgcta 26490319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 105 - 184
Target Start/End: Complemental strand, 27917653 - 27917574
Alignment:
Q  105 tacaaaatctataagtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgcta 184  Q
    ||||| ||||| ||||||||| |||||||   ||||||| |||| ||||||| | ||||||||||||||| |||||||||    
T  27917653 tacaacatctacaagtcttctttctacatgtccaaaccatctaagcctatttcctaccatcttttctactataggtgcta 27917574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 122 - 268
Target Start/End: Complemental strand, 28245503 - 28245361
Alignment:
Q  122 ttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgctatgctaccccaattttctctctaatt-tgtcatttcta 220  Q
    ||||||||||||   ||||||| ||||  |||||||| |||| |||||||||| |||||||||     |||| | | ||||||||||  ||||||| |||    
T  28245503 ttctctctacatgcccaaaccatctaagtctattttctaccaacttttctactataggtgcta-----cccccactctctctctaatgatgtcattccta 28245409  T
Q  221 atcctatctcatctagtcttaccacacatccaatgcaacattctcatc 268  Q
    ||||||||    ||||||||||||| ||||||| ||||||| ||||||    
T  28245408 atcctatccaggctagtcttaccactcatccaacgcaacatcctcatc 28245361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 119 - 280
Target Start/End: Complemental strand, 54279089 - 54278931
Alignment:
Q  119 gtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgctatgctaccccaattttctctctaatt-tgtcattt 217  Q
    ||||||||||||| |   ||||||  |||| ||||||||| |||| |||||||||| |||||||||     |||| | | ||||||||||  |||||||     
T  54279089 gtcttctctctacgtgcccaaaccgtctaagcctattttctaccaacttttctactataggtgcta-----cccctactctctctctaatggtgtcattc 54278995  T
Q  218 ctaatcctatctcatctagtcttaccacacatccaatgcaacattctcatc-ccgctacactta 280  Q
    ||||| ||||||  ||||||||||||||  |||||| ||||||| |||||| | ||||||||||    
T  54278994 ctaattctatcttgtctagtcttaccacttatccaacgcaacatcctcatctctgctacactta 54278931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 88 - 174
Target Start/End: Original strand, 42026718 - 42026804
Alignment:
Q  88 tgatatactctctttcctacaaaatctataagtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctact 174  Q
    |||| ||||||| || ||| | |||||| |||| |||||||||||   ||||||||||||| |||| |||||||| |||||||||||    
T  42026718 tgatctactctccttactaaataatctacaagttttctctctacaagctcaaaccacctaagcctagtttccaccctcttttctact 42026804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 211 - 261
Target Start/End: Original strand, 46431972 - 46432022
Alignment:
Q  211 gtcatttctaatcctatctcatctagtcttaccacacatccaatgcaacat 261  Q
    ||||||||||| ||||||   ||||||||||||||||||||||||||||||    
T  46431972 gtcatttctaaccctatcctgtctagtcttaccacacatccaatgcaacat 46432022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 174
Target Start/End: Complemental strand, 46140562 - 46140446
Alignment:
Q  58 attcctctagtgatcagactatcctcaatttgatatactctctttcctacaaaatctataagtcttctctctacataatcaaaccacctaaacctatttt 157  Q
    ||||| ||||||||| ||||||| ||||| |||| | || | ||| ||||| |||||| | |||||||||||| ||   |||||||||| |  ||| |||    
T  46140562 attcccctagtgatctgactatcatcaatctgatctgctatttttactacagaatctacaggtcttctctctatatgtccaaaccacctgagtctagttt 46140463  T
Q  158 ccaccatcttttctact 174  Q
    ||||| |||||||||||    
T  46140462 ccaccgtcttttctact 46140446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 118 - 181
Target Start/End: Complemental strand, 3987117 - 3987054
Alignment:
Q  118 agtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtg 181  Q
    ||||||||||||||||   ||||||||||||  ||| |||| ||||||||||||||| ||||||    
T  3987117 agtcttctctctacattcccaaaccacctaagtctagtttctaccatcttttctactataggtg 3987054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 210 - 280
Target Start/End: Original strand, 33272328 - 33272399
Alignment:
Q  210 tgtcatttctaatcctatctcatctagtcttaccacacatccaatgcaacattctcatc-ccgctacactta 280  Q
    |||||||  ||||||||||   |||||||||||||| ||||||||||||||| |||||| | ||||||||||    
T  33272328 tgtcattcttaatcctatcatgtctagtcttaccactcatccaatgcaacatcctcatctctgctacactta 33272399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 93 - 172
Target Start/End: Original strand, 44443391 - 44443470
Alignment:
Q  93 tactctctttcctacaaaatctataagtcttctctctacataatcaaaccacctaaacctattttccaccatcttttcta 172  Q
    ||||||| || ||||| |||||| |||||||||||||||||   ||||| || ||| || | ||||||||||||||||||    
T  44443391 tactctccttactacagaatctaaaagtcttctctctacatgtgcaaactacttaagccgagtttccaccatcttttcta 44443470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 210 - 261
Target Start/End: Complemental strand, 45236838 - 45236787
Alignment:
Q  210 tgtcatttctaatcctatctcatctagtcttaccacacatccaatgcaacat 261  Q
    |||||||||||||| ||||   |||||||||||||||||||||| |||||||    
T  45236838 tgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacat 45236787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 210 - 280
Target Start/End: Complemental strand, 45728128 - 45728057
Alignment:
Q  210 tgtcatttctaatcctatctcatctagtcttaccacacatccaatgcaacattctcatc-ccgctacactta 280  Q
    |||||||||||||||||| || ||| |||||||||| ||||||  ||||||| |||||| | ||||||||||    
T  45728128 tgtcatttctaatcctatttcgtctcgtcttaccactcatccagcgcaacatcctcatctctgctacactta 45728057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 199 - 280
Target Start/End: Complemental strand, 46568110 - 46568027
Alignment:
Q  199 tctctctaat-ttgtcatttctaatcctatctcatctagtcttaccacacatccaatgcaacattctcatc-ccgctacactta 280  Q
    |||||||||| |||||||||||||| | ||||  |||||||||| |||||||||||  |||||| |||||| | ||||||||||    
T  46568110 tctctctaatgttgtcatttctaattcaatctggtctagtcttaacacacatccaacacaacatcctcatctctgctacactta 46568027  T

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Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 140 - 253
Target Start/End: Complemental strand, 50249432 - 50249320
Alignment:
Q  140 accacctaaacctattttccaccatcttttctactttaggtgctatgctaccccaattttctctctaat-ttgtcatttctaatc---ctatctcatcta 235  Q
    |||||||||  ||| |||||||||||||||||||| || | ||||     |||||| | |||||||||| || ||||||||||||   ||||||| ||||    
T  50249432 accacctaagtctagtttccaccatcttttctactatacgcgcta-----ccccaactctctctctaatgttatcatttctaatcatcctatctcgtcta 50249338  T
Q  236 gtcttaccacacatccaa 253  Q
    ||| ||||||||||||||    
T  50249337 gtcctaccacacatccaa 50249320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 119 - 268
Target Start/End: Complemental strand, 22141 - 21997
Alignment:
Q  119 gtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgctatgctaccccaattttctctctaatt-tgtcattt 217  Q
    |||||||||||||||   ||||||| |||| ||||||| | |||| |||||||||| |||||||||     |||| | | ||||||||||  || ||||     
T  22141 gtcttctctctacatgtccaaaccatctaagcctattt-ctaccaacttttctactataggtgcta-----cccccactctctctctaatggtgacattc 22048  T
Q  218 ctaatcctatctcatctagtcttaccacacatccaatgcaacattctcatc 268  Q
    |||||||||||   |||||||||||||| ||||||  ||||||| ||||||    
T  22047 ctaatcctatcatgtctagtcttaccactcatccagcgcaacatcctcatc 21997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 267
Target Start/End: Complemental strand, 11663632 - 11663574
Alignment:
Q  209 ttgtcatttctaatcctatctcatctagtcttaccacacatccaatgcaacattctcat 267  Q
    ||||||| |||||| |||||||||| | ||||||||||||||||| || |||| |||||    
T  11663632 ttgtcatatctaattctatctcatcgaatcttaccacacatccaacgcgacatcctcat 11663574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 120 - 174
Target Start/End: Original strand, 48734349 - 48734403
Alignment:
Q  120 tcttctctctacataatcaaaccacctaaacctattttccaccatcttttctact 174  Q
    ||||||||||||||   |||||||||||| ||||||||| ||||||| |||||||    
T  48734349 tcttctctctacatgcccaaaccacctaagcctattttctaccatctgttctact 48734403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 184
Target Start/End: Complemental strand, 5168901 - 5168836
Alignment:
Q  119 gtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgcta 184  Q
    |||||||||||||||  |||||||| |||| | ||||||| |||| |||||||||  |||||||||    
T  5168901 gtcttctctctacatgttcaaaccatctaagcgtattttctaccaacttttctaccataggtgcta 5168836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 172
Target Start/End: Complemental strand, 11581513 - 11581460
Alignment:
Q  119 gtcttctctctacataatcaaaccacctaaacctattttccaccatcttttcta 172  Q
    ||||||||||||||||  ||||||||||||  ||| |||| |||||||||||||    
T  11581513 gtcttctctctacatacccaaaccacctaagtctagtttctaccatcttttcta 11581460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 267
Target Start/End: Original strand, 19676398 - 19676447
Alignment:
Q  218 ctaatcctatctcatctagtcttaccacacatccaatgcaacattctcat 267  Q
    |||||| |||| |||||||||||||| | ||||||||||||||| |||||    
T  19676398 ctaatcttatcccatctagtcttaccgctcatccaatgcaacatcctcat 19676447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 182
Target Start/End: Complemental strand, 26388532 - 26388487
Alignment:
Q  137 caaaccacctaaacctattttccaccatcttttctactttaggtgc 182  Q
    |||| ||||||||||||||||| ||||||||||||| | |||||||    
T  26388532 caaatcacctaaacctattttctaccatcttttctattataggtgc 26388487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 184
Target Start/End: Complemental strand, 35033215 - 35033150
Alignment:
Q  119 gtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgcta 184  Q
    |||||||||||||||   |||||||  ||| ||||||||| |||| |||||||||| |||||||||    
T  35033215 gtcttctctctacatgtccaaaccatataagcctattttctaccaacttttctactataggtgcta 35033150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 184
Target Start/End: Complemental strand, 38060500 - 38060435
Alignment:
Q  119 gtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgcta 184  Q
    |||||||||||||||   ||||||| |||| ||||||||| |||| |||||||| | |||||||||    
T  38060500 gtcttctctctacatgtccaaaccatctaagcctattttctaccaacttttctattataggtgcta 38060435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 184
Target Start/End: Complemental strand, 38430913 - 38430852
Alignment:
Q  123 tctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgcta 184  Q
    |||||||||||   ||| | |||||| ||||||||| ||||||||||||||| |||||||||    
T  38430913 tctctctacatgcccaatcaacctaagcctattttctaccatcttttctactataggtgcta 38430852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 174
Target Start/End: Original strand, 44134061 - 44134098
Alignment:
Q  137 caaaccacctaaacctattttccaccatcttttctact 174  Q
    ||||||||||||  ||||||||||||||||||||||||    
T  44134061 caaaccacctaagtctattttccaccatcttttctact 44134098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 118 - 174
Target Start/End: Original strand, 33272234 - 33272290
Alignment:
Q  118 agtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctact 174  Q
    ||||||||||||||||   ||||||| |||| ||||||||| |||| ||||||||||    
T  33272234 agtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctact 33272290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 64; Significance: 6e-28; HSPs: 66)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 61 - 184
Target Start/End: Original strand, 48431561 - 48431684
Alignment:
Q  61 cctctagtgatcagactatcctcaatttgatatactctctttcctacaaaatctataagtcttctctctacataatcaaaccacctaaacctattttcca 160  Q
    ||||| || ||| |||||||||| || ||||  ||||||||| |||||||||||| |||||||||||||||||   |||||||||||| |||||||||||    
T  48431561 cctcttgtaatccgactatcctccatctgatcaactctctttactacaaaatctacaagtcttctctctacatgcccaaaccacctaagcctattttcca 48431660  T
Q  161 ccatcttttctactttaggtgcta 184  Q
    |||||||||||||| |||| ||||    
T  48431661 ccatcttttctactataggggcta 48431684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 61 - 247
Target Start/End: Original strand, 35828705 - 35828887
Alignment:
Q  61 cctctagtgatcagactatcctcaatttgatatactctctttcctacaaaatctataagtcttctctctacataatcaaaccacctaaacctattttcca 160  Q
    ||||||| |||| |||||||||| || |||| | ||||| || ||||| |||||||| ||||||||||||||    |||||||||||| |||||||||||    
T  35828705 cctctagggatctgactatcctccatatgatcttctctccttactacataatctataggtcttctctctacacgtccaaaccacctaaccctattttcca 35828804  T
Q  161 ccatcttttctactttaggtgctatgctaccccaattttctctctaat-ttgtcatttctaatcctatctcatctagtcttaccacac 247  Q
    |||||||||||||  ||||     |||||| | || | |||||||||| ||||||||||||||| |||| || ||||||||| |||||    
T  35828805 ccatcttttctaccatagg-----tgctactcaaactctctctctaatattgtcatttctaatcttatcacacctagtcttatcacac 35828887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 104 - 261
Target Start/End: Complemental strand, 43423803 - 43423648
Alignment:
Q  104 ctacaaaatctataagtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgctatgctaccccaattttctct 203  Q
    ||||| |||||| |||||||||||||||||   |||||||||||| |||| |||||||||||||||||||| ||||     || |||||||| | |||||    
T  43423803 ctacataatctacaagtcttctctctacatggccaaaccacctaagcctagtttccaccatcttttctactatagg-----tgttaccccaactctctct 43423709  T
Q  204 ctaat-ttgtcatttctaatcctatctcatctagtctt--accacacatccaatgcaacat 261  Q
    ||||| | ||||||||||||||||||   |||||||||   |||||||||||| |||||||    
T  43423708 ctaatgtggtcatttctaatcctatcctgtctagtcttcccccacacatccaacgcaacat 43423648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 74 - 184
Target Start/End: Complemental strand, 2544713 - 2544603
Alignment:
Q  74 gactatcctcaatttgatatactctctttcctacaaaatctataagtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctac 173  Q
    |||||||||| || |||| ||||||| || ||| | |||||||| |||||||||||||||   ||||||||||||  || ||||||||||||||||||||    
T  2544713 gactatcctccatctgatctactctccttactatagaatctataggtcttctctctacatgtccaaaccacctaagtctgttttccaccatcttttctac 2544614  T
Q  174 tttaggtgcta 184  Q
    | |||||||||    
T  2544613 tataggtgcta 2544603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 104 - 184
Target Start/End: Original strand, 36340001 - 36340081
Alignment:
Q  104 ctacaaaatctataagtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgcta 184  Q
    |||||||||||||| ||||||||||| |||    ||||||||||||||||||||||||||||||||||| | |||||||||    
T  36340001 ctacaaaatctataggtcttctctctccatgtctaaaccacctaaacctattttccaccatcttttctaatataggtgcta 36340081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 119 - 280
Target Start/End: Complemental strand, 1210814 - 1210656
Alignment:
Q  119 gtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgctatgctaccccaattttctctctaatt-tgtcattt 217  Q
    |||||||||||||||   ||||||| |||| ||||||||| |||| |||||||||| |||||||||     |||| | | ||||||||||  |||||||     
T  1210814 gtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgcta-----cccccactctctctctaatggtgtcattc 1210720  T
Q  218 ctaatcctatctcatctagtcttaccacacatccaatgcaacattctcatc-ccgctacactta 280  Q
    |||||||||||   |||||||||||||| ||||||| ||||||| |||||| | ||||||||||    
T  1210719 ctaatcctatcctgtctagtcttaccactcatccaacgcaacatcctcatctctgctacactta 1210656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 110 - 241
Target Start/End: Complemental strand, 1661508 - 1661377
Alignment:
Q  110 aatctataagtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgctatgctaccccaattttctctctaat- 208  Q
    |||||||| |||||||||||||||  |||||||| || | ||||||||||||||||||||||||| ||||     ||||||||||| | |||||| |||     
T  1661508 aatctataggtcttctctctacatgctcaaaccatctgagcctattttccaccatcttttctactatagg-----tgctaccccaactctctctcaaata 1661414  T
Q  209 ttg----tcatttctaatcctatctcatctagtctta 241  Q
    |||    ||||||||||||||||| ||||||||||||    
T  1661413 ttgtcattcatttctaatcctatcacatctagtctta 1661377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 119 - 280
Target Start/End: Complemental strand, 15086003 - 15085845
Alignment:
Q  119 gtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgctatgctaccccaattttctctctaatt-tgtcattt 217  Q
    |||||||||||||||   ||||||| |||| ||||||||| |||| |||||||||| |||||||||     |||| | | ||||||||||  |||||||     
T  15086003 gtcttctctctacatgtccaaaccatctaagcctattttctaccaacttttctactataggtgcta-----cccccactctctctctaatggtgtcattc 15085909  T
Q  218 ctaatcctatctcatctagtcttaccacacatccaatgcaacattctcatc-ccgctacactta 280  Q
    |||||||||||  ||||||||||||||| | ||||  ||||||| |||||| ||||||||||||    
T  15085908 ctaatcctatcctatctagtcttaccactcgtccagcgcaacatcctcatctccgctacactta 15085845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 119 - 280
Target Start/End: Original strand, 30202343 - 30202501
Alignment:
Q  119 gtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgctatgctaccccaattttctctctaatt-tgtcattt 217  Q
    ||||||||||||||| | ||||||| |||| ||||||||| |||| | |||||||| |||||||||     |||| | | ||||||||||  |||||||     
T  30202343 gtcttctctctacatgaccaaaccatctaagcctattttctaccaacctttctactataggtgcta-----cccccactctctctctaatggtgtcattc 30202437  T
Q  218 ctaatcctatctcatctagtcttaccacacatccaatgcaacattctcatc-ccgctacactta 280  Q
    |||||||||||   |||||||||||||| ||||||| ||||||| |||||| | ||||||||||    
T  30202438 ctaatcctatcatgtctagtcttaccactcatccaacgcaacatcctcatctctgctacactta 30202501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 17 - 184
Target Start/End: Complemental strand, 40416548 - 40416375
Alignment:
Q  17 atagatcttgctcaatagtttgtcttataatttttcaaggaattcctcta------gtgatcagactatcctcaatttgatatactctctttcctacaaa 110  Q
    ||||||||| || |||||||||||||||| |||||| |||  ||| |||       |||||| |||||||||  || |||| ||||||| || |||||||    
T  40416548 atagatctttcttaatagtttgtcttatagtttttctaggtcttcttctgtctttggtgatctgactatcctgcatctgatctactctccttactacaaa 40416449  T
Q  111 atctataagtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgcta 184  Q
    ||||| |  ||||||||||||||    ||||||||||| |||  |||||||||||||||||||| |||||||||    
T  40416448 atctacagttcttctctctacatgcctaaaccacctaagcctcgtttccaccatcttttctactataggtgcta 40416375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 119 - 183
Target Start/End: Original strand, 13827930 - 13827994
Alignment:
Q  119 gtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgct 183  Q
    |||||||||||||||  ||||||||||||| |||| |||||||||||||||||||| ||||||||    
T  13827930 gtcttctctctacatgttcaaaccacctaaccctagtttccaccatcttttctactataggtgct 13827994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 93 - 181
Target Start/End: Original strand, 32404713 - 32404801
Alignment:
Q  93 tactctctttcctacaaaatctataagtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtg 181  Q
    ||||||| || ||| | |||||| | ||||||||||||||||  |||||||||||| |||||||||||||||||||| |||| ||||||    
T  32404713 tactctccttactatagaatctacaggtcttctctctacatatccaaaccacctaagcctattttccaccatcttttttactataggtg 32404801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 119 - 280
Target Start/End: Complemental strand, 696338 - 696180
Alignment:
Q  119 gtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgctatgctaccccaattttctctctaatt-tgtcattt 217  Q
    |||||||||||||||   ||| ||| |||| ||||||||| |||| |||||||||| |||||||||     |||| | | ||||||||||  |||||||     
T  696338 gtcttctctctacatgtccaagccatctaagcctattttctaccaacttttctactataggtgcta-----cccccactctctctctaatggtgtcattc 696244  T
Q  218 ctaatcctatctcatctagtcttaccacacatccaatgcaacattctcatc-ccgctacactta 280  Q
    |||||||||||   |||||||||||||| ||||||  ||||||| |||||| ||||||||||||    
T  696243 ctaatcctatcctgtctagtcttaccactcatccagcgcaacatcctcatctccgctacactta 696180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 199 - 261
Target Start/End: Original strand, 40920825 - 40920888
Alignment:
Q  199 tctctctaat-ttgtcatttctaatcctatctcatctagtcttaccacacatccaatgcaacat 261  Q
    |||||||||| |||| ||||||||||||||||| |||| |||||||||||||||||||||||||    
T  40920825 tctctctaatattgtaatttctaatcctatctcgtctaatcttaccacacatccaatgcaacat 40920888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 61 - 171
Target Start/End: Complemental strand, 8796336 - 8796226
Alignment:
Q  61 cctctagtgatcagactatcctcaatttgatatactctctttcctacaaaatctataagtcttctctctacataatcaaaccacctaaacctattttcca 160  Q
    |||||||||||| |||||||||| ||  ||| ||||||| || |||| ||| ||| | ||||| |||||||||   ||||||||||||||||||||||||    
T  8796336 cctctagtgatctgactatcctccatccgatttactctccttactacgaaacctacatgtcttatctctacatgtccaaaccacctaaacctattttcca 8796237  T
Q  161 ccatcttttct 171  Q
    || | ||||||    
T  8796236 ccttgttttct 8796226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 119 - 268
Target Start/End: Complemental strand, 9509387 - 9509242
Alignment:
Q  119 gtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgctatgctaccccaattttctctctaat-ttgtcattt 217  Q
    |||||||||||||||   ||||| |||||| ||||||||  ||||||||||||||| ||||     ||||||||||| | ||||||||||  ||||||||    
T  9509387 gtcttctctctacatgcccaaactacctaagcctattttttaccatcttttctactatagg-----tgctaccccaactctctctctaatggtgtcattt 9509293  T
Q  218 ctaatcctatctcatctagtcttaccacacatccaatgcaacattctcatc 268  Q
    |||||| ||||   |||||||||| ||| |||||||  |||||| ||||||    
T  9509292 ctaatcatatcctgtctagtcttatcactcatccaacacaacatcctcatc 9509242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 119 - 268
Target Start/End: Original strand, 49347606 - 49347751
Alignment:
Q  119 gtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgctatgctaccccaattttctctctaatt-tgtcattt 217  Q
    ||||||||||| ||| | ||||||| |||| ||||||||| |||| |||||||||| |||     |||||||||| | | |||||| |||  |||||||     
T  49347606 gtcttctctctgcatgaccaaaccatctaagcctattttctaccaacttttctactatag-----atgctacccctactctctctccaatggtgtcattc 49347700  T
Q  218 ctaatcctatctcatctagtcttaccacacatccaatgcaacattctcatc 268  Q
    |||||||||||   |||||||||||||| ||||||| ||||||| ||||||    
T  49347701 ctaatcctatcctgtctagtcttaccactcatccaacgcaacatcctcatc 49347751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 119 - 268
Target Start/End: Original strand, 51440978 - 51441123
Alignment:
Q  119 gtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgctatgctaccccaattttctctctaat-ttgtcattt 217  Q
    |||||||||||||||   ||||||| |||| ||||||||| |||| |||||||||| ||||     || |||||| | | ||||||||||  |||||||     
T  51440978 gtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactatagg-----tgttacccccactctctctctaatggtgtcattc 51441072  T
Q  218 ctaatcctatctcatctagtcttaccacacatccaatgcaacattctcatc 268  Q
    |||||||||||   |||||||||||||| | ||||||||||||| ||||||    
T  51441073 ctaatcctatcatgtctagtcttaccactcgtccaatgcaacatcctcatc 51441123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 209 - 262
Target Start/End: Original strand, 16273119 - 16273172
Alignment:
Q  209 ttgtcatttctaatcctatctcatctagtcttaccacacatccaatgcaacatt 262  Q
    |||||||||||||||  |||||||||||||||||||||||||||| ||||||||    
T  16273119 ttgtcatttctaatctcatctcatctagtcttaccacacatccaacgcaacatt 16273172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 61 - 184
Target Start/End: Complemental strand, 5338851 - 5338728
Alignment:
Q  61 cctctagtgatcagactatcctcaatttgatatactctctttcctacaaaatctataagtcttctctctacataatcaaaccacctaaacctattttcca 160  Q
    |||||||||||| || ||||||| || |||| ||||||| || ||| |  ||||| | ||||||||||| |||   |||||||||||| |  | ||||||    
T  5338851 cctctagtgatctgaatatcctccatctgatctactctccttactaaagcatctacaggtcttctctctgcatgcccaaaccacctaagctcagtttcca 5338752  T
Q  161 ccatcttttctactttaggtgcta 184  Q
    |||||||||||||| |||||||||    
T  5338751 ccatcttttctactataggtgcta 5338728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 119 - 280
Target Start/End: Complemental strand, 8391841 - 8391683
Alignment:
Q  119 gtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgctatgctaccccaattttctctctaatt-tgtcattt 217  Q
    |||| ||||||||||   ||||| | |||||||||||||| |||| |||||||||| |||||||||     |||| | | ||||||||||  |||||||     
T  8391841 gtctcctctctacatgtccaaacaatctaaacctattttctaccaacttttctactataggtgcta-----cccccactctctctctaatggtgtcattc 8391747  T
Q  218 ctaatcctatctcatctagtcttaccacacatccaatgcaacattctcatc-ccgctacactta 280  Q
    ||||||||||||  | |||||||||||| |||||||  ||||||  ||||| ||||||||||||    
T  8391746 ctaatcctatcttgtgtagtcttaccactcatccaacacaacatcttcatctccgctacactta 8391683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 119 - 280
Target Start/End: Complemental strand, 9592803 - 9592645
Alignment:
Q  119 gtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgctatgctaccccaattttctctctaatt-tgtcattt 217  Q
    |||||||||||||||   ||| ||| |||| ||||||||| || | |||||||||| |||||||||     |||| | | ||||||||||  |||||||     
T  9592803 gtcttctctctacatgcccaacccatctaagcctattttctacaaacttttctactataggtgcta-----cccccactctctctctaatggtgtcattc 9592709  T
Q  218 ctaatcctatctcatctagtcttaccacacatccaatgcaacattctcatc-ccgctacactta 280  Q
    |||||||||||   |||||||||||||| ||||||| ||||||| |||||| | ||||||||||    
T  9592708 ctaatcctatcatgtctagtcttaccactcatccaacgcaacatcctcatctctgctacactta 9592645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 61 - 180
Target Start/End: Original strand, 13827725 - 13827844
Alignment:
Q  61 cctctagtgatcagactatcctcaatttgatatactctctttcctacaaaatctataagtcttctctctacataatcaaaccacctaaacctattttcca 160  Q
    |||||||||||| ||||||  || || |||| ||||||| || ||||| |||||| |  ||||||||||||||   |||||||||| | |||| ||||||    
T  13827725 cctctagtgatctgactatgttccatatgatctactctccttactacagaatctacacttcttctctctacatgtccaaaccaccttaccctagtttcca 13827824  T
Q  161 ccatcttttctactttaggt 180  Q
    || ||||||||||| |||||    
T  13827825 ccgtcttttctactataggt 13827844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 61 - 172
Target Start/End: Original strand, 14225984 - 14226095
Alignment:
Q  61 cctctagtgatcagactatcctcaatttgatatactctctttcctacaaaatctataagtcttctctctacataatcaaaccacctaaacctattttcca 160  Q
    |||||||||||  |||||  ||| || |||| ||||||| || |||||||||||| | |  | ||||||||||   |||||||||||| |||||||||||    
T  14225984 cctctagtgatttgactacgctccatgtgatctactctccttactacaaaatctacaggaatcctctctacatgcccaaaccacctaagcctattttcca 14226083  T
Q  161 ccatcttttcta 172  Q
    ||||||||||||    
T  14226084 ccatcttttcta 14226095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 187 - 280
Target Start/End: Complemental strand, 40419645 - 40419550
Alignment:
Q  187 ctaccccaattttctctctaat-ttgtcatttctaatcctatctcatctagtcttaccacacatccaatgcaacattctcatc-ccgctacactta 280  Q
    ||||||||| | |||||||||| |||||||||||||| |||||||||||||| |||||| |||| ||| ||| ||| |||||| | ||||||||||    
T  40419645 ctaccccaactctctctctaatgttgtcatttctaattctatctcatctagttttaccatacattcaacgcaccatcctcatctctgctacactta 40419550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 199 - 268
Target Start/End: Complemental strand, 4379999 - 4379929
Alignment:
Q  199 tctctctaat-ttgtcatttctaatcctatctcatctagtcttaccacacatccaatgcaacattctcatc 268  Q
    |||||||||| ||||||||||||||| |||||  ||||||||||||||||||||||  |||||| ||||||    
T  4379999 tctctctaatgttgtcatttctaatcatatcttttctagtcttaccacacatccaacacaacatcctcatc 4379929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 139 - 268
Target Start/End: Original strand, 9599627 - 9599752
Alignment:
Q  139 aaccacctaaacctattttccaccatcttttctactttaggtgctatgctaccccaattttctctctaat-ttgtcatttctaatcctatctcatctagt 237  Q
    |||||||||| ||||||||| ||||||||||||||| ||||     || ||| |||| | ||||||||||  ||||||| |||||| |||| | ||||||    
T  9599627 aaccacctaagcctattttctaccatcttttctactatagg-----tgttactccaactctctctctaatgatgtcattcctaatcatatcccgtctagt 9599721  T
Q  238 cttaccacacatccaatgcaacattctcatc 268  Q
    |||||||| |||||||  |||||| ||||||    
T  9599722 cttaccactcatccaacacaacatcctcatc 9599752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 211 - 261
Target Start/End: Complemental strand, 35672669 - 35672619
Alignment:
Q  211 gtcatttctaatcctatctcatctagtcttaccacacatccaatgcaacat 261  Q
    ||||||||||||||||||||||||||| |||||||||||  ||||||||||    
T  35672669 gtcatttctaatcctatctcatctagttttaccacacattaaatgcaacat 35672619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 210 - 267
Target Start/End: Original strand, 16822319 - 16822376
Alignment:
Q  210 tgtcatttctaatcctatctcatctagtcttaccacacatccaatgcaacattctcat 267  Q
    |||||||||||||||||||| ||||||| |||||||||||||||  |||||| |||||    
T  16822319 tgtcatttctaatcctatcttatctagtattaccacacatccaacacaacatcctcat 16822376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 77 - 161
Target Start/End: Complemental strand, 9002463 - 9002379
Alignment:
Q  77 tatcctcaatttgatatactctctttcctacaaaatctataagtcttctctctacataatcaaaccacctaaacctattttccac 161  Q
    ||||||| ||||||| ||||||  || |||||||||||| |||| || |||||||||   ||||| |||||||||||||||||||    
T  9002463 tatcctctatttgatctactcttcttactacaaaatctacaagttttttctctacatgtccaaactacctaaacctattttccac 9002379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 120 - 172
Target Start/End: Complemental strand, 41611874 - 41611822
Alignment:
Q  120 tcttctctctacataatcaaaccacctaaacctattttccaccatcttttcta 172  Q
    ||||||||||||||  ||||||||| ||||||||||||| |||||||||||||    
T  41611874 tcttctctctacattctcaaaccacataaacctattttctaccatcttttcta 41611822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 85 - 173
Target Start/End: Complemental strand, 52837628 - 52837540
Alignment:
Q  85 atttgatatactctctttcctacaaaatctataagtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctac 173  Q
    ||||||| ||||||| ||  |||| |||||||| |||||||||||||||| ||||||  |||||  |||||||||||||| | ||||||    
T  52837628 atttgatctactctccttattacacaatctataggtcttctctctacatactcaaactccctaagtctattttccaccatttattctac 52837540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 120 - 261
Target Start/End: Complemental strand, 8671986 - 8671851
Alignment:
Q  120 tcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgctatgctaccccaattttctctctaat-ttgtcatttc 218  Q
    ||||||||||||||   ||||||| |||| ||||||||| |||| |||||||||| |||||||||     |||||    ||||||||||  ||||||| |    
T  8671986 tcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgcta----ccccca---ctctctctaatggtgtcattcc 8671894  T
Q  219 taatcctatctcatctagtcttaccacacatccaatgcaacat 261  Q
    ||||||||||   |||||||||||||| ||||||| |||||||    
T  8671893 taatcctatcatgtctagtcttaccactcatccaacgcaacat 8671851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 93 - 172
Target Start/End: Complemental strand, 46388471 - 46388392
Alignment:
Q  93 tactctctttcctacaaaatctataagtcttctctctacataatcaaaccacctaaacctattttccaccatcttttcta 172  Q
    ||||||| || ||||| |||||| |||||||||||||||||   ||||| |||||| || | ||||||||||||||||||    
T  46388471 tactctccttactacagaatctacaagtcttctctctacatgtgcaaactacctaagccgagtttccaccatcttttcta 46388392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 93 - 179
Target Start/End: Original strand, 990646 - 990732
Alignment:
Q  93 tactctctttcctacaaaatctataagtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttagg 179  Q
    ||||||| || ||||| |||||||| ||||||||| ||||||   ||||||||| | ||||||| | ||||||||||||||| ||||    
T  990646 tactctccttgctacagaatctatatgtcttctctttacatacctaaaccacctgagcctatttcctaccatcttttctactatagg 990732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 119 - 268
Target Start/End: Original strand, 4001668 - 4001813
Alignment:
Q  119 gtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgctatgctaccccaattttctctctaatt-tgtcattt 217  Q
    |||| ||||||||||   ||||||| |||| ||||||||| |||| |||||||||| |||||||||     |||| | | ||||||||||  |||||||     
T  4001668 gtctcctctctacatgtccaaaccatctaagcctattttctaccaacttttctactataggtgcta-----cccccactctctctctaatggtgtcattc 4001762  T
Q  218 ctaatcctatctcatctagtcttaccacacatccaatgcaacattctcatc 268  Q
    |||||||||| |  |||||||||||||| |||| |  ||||||| ||||||    
T  4001763 ctaatcctattttgtctagtcttaccactcatctagcgcaacatcctcatc 4001813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 180
Target Start/End: Complemental strand, 7921901 - 7921843
Alignment:
Q  122 ttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggt 180  Q
    ||||||||||||   |||||||| |||||||| |||||||||||||||||||| |||||    
T  7921901 ttctctctacatgtccaaaccacataaacctagtttccaccatcttttctactataggt 7921843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 210 - 268
Target Start/End: Complemental strand, 19936504 - 19936446
Alignment:
Q  210 tgtcatttctaatcctatctcatctagtcttaccacacatccaatgcaacattctcatc 268  Q
    ||||||| ||| ||||||| |||||||||||||||| |||||||  |||||||||||||    
T  19936504 tgtcattcctattcctatcccatctagtcttaccactcatccaacacaacattctcatc 19936446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 61 - 250
Target Start/End: Complemental strand, 27704135 - 27703951
Alignment:
Q  61 cctctagtgatcagactatcctcaatttgatatactctctttcctacaaaatctataagtcttctctctacataatcaaaccacctaaacctattttcca 160  Q
    |||||||||||| ||  |||||| || |||| ||||||| || ||||| ||||||   ||||| |||||||||   |||||||| ||| | | |||||||    
T  27704135 cctctagtgatctgaacatcctccatctgatctactctccttgctacataatctag--gtcttttctctacatgtccaaaccacataagcatgttttcca 27704038  T
Q  161 ccatcttttctactttaggtgctatgctaccccaattttctctctaatttg-tcatttctaatcctatctcatctagtcttaccacacatc 250  Q
    |||||||||||||| || |     || |||||||  | ||| |||||  || |||||||||||| ||||||||| ||||||||||||||||    
T  27704037 ccatcttttctactataagg----tgttaccccatctctctttctaacatggtcatttctaatcttatctcatcaagtcttaccacacatc 27703951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 137 - 277
Target Start/End: Original strand, 32082976 - 32083113
Alignment:
Q  137 caaaccacctaaacctattttccaccatcttttctactttaggtgctatgctaccccaattttctctctaatt-tgtcatttctaatcctatctcatcta 235  Q
    ||||||| |||| ||||||||| |||| |||||||||| |||||||||     |||| | | ||||||||||  ||||||| ||||||||| |   ||||    
T  32082976 caaaccatctaagcctattttctaccaacttttctactataggtgcta-----cccccactctctctctaatggtgtcattcctaatcctaccctgtcta 32083070  T
Q  236 gtcttaccacacatccaatgcaacattctcatc-ccgctacac 277  Q
    |||||||||| ||||||  ||||||| |||||| |||||||||    
T  32083071 gtcttaccactcatccagcgcaacatcctcatctccgctacac 32083113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 111 - 268
Target Start/End: Original strand, 32231159 - 32231312
Alignment:
Q  111 atctataagtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgctatgctaccccaattttctctctaatt- 209  Q
    ||||| |||||||||||||||||   ||||||| |||| ||||||||| ||||  ||||||||| |||||||||     |||| | | ||||||||||      
T  32231159 atctacaagtcttctctctacatgcccaaaccatctaagcctattttctaccaatttttctactataggtgcta-----cccccactctctctctaatgg 32231253  T
Q  210 tgtcatttctaatcctatctcatctagtcttaccacacatccaatgcaacattctcatc 268  Q
    ||||||| |||||||||||   |||| ||||||||| |||| |  ||||||| ||||||    
T  32231254 tgtcattcctaatcctatcatgtctaatcttaccactcatctagcgcaacatcctcatc 32231312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 119 - 268
Target Start/End: Original strand, 34792562 - 34792707
Alignment:
Q  119 gtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgctatgctaccccaattttctctctaatt-tgtcattt 217  Q
    |||||||||||||||   ||||||| |||| |||| |||| |||| |||||||||| |||||||||     |||| | | ||||||||||  | |||||     
T  34792562 gtcttctctctacatgcccaaaccatctaagcctactttctaccaacttttctactataggtgcta-----cccccactctctctctaatggtttcattc 34792656  T
Q  218 ctaatcctatctcatctagtcttaccacacatccaatgcaacattctcatc 268  Q
    |||||||||||   |||||||||||||| ||||||  ||||||| ||||||    
T  34792657 ctaatcctatcatgtctagtcttaccactcatccagcgcaacatcctcatc 34792707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 119 - 244
Target Start/End: Complemental strand, 39140589 - 39140468
Alignment:
Q  119 gtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgctatgctaccccaattttctctctaat-ttgtcattt 217  Q
    |||||||||||||||   |||||||||||| || |||||   |||||||||||||| ||||     |||||| |||| | ||||| ||||  | |||||     
T  39140589 gtcttctctctacatgcccaaaccacctaagccaattttttgccatcttttctactatagg-----tgctacgccaactctctctgtaatggtttcattc 39140495  T
Q  218 ctaatcctatctcatctagtcttacca 244  Q
    |||||||||||||||||||||||||||    
T  39140494 ctaatcctatctcatctagtcttacca 39140468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 119 - 184
Target Start/End: Complemental strand, 51602125 - 51602060
Alignment:
Q  119 gtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgcta 184  Q
    |||||||||||||||   ||||||| |||| ||||||||| |||| |||||||||| |||||||||    
T  51602125 gtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgcta 51602060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 187 - 267
Target Start/End: Original strand, 52442780 - 52442861
Alignment:
Q  187 ctaccccaattttctctctaat-ttgtcatttctaatcctatctcatctagtcttaccacacatccaatgcaacattctcat 267  Q
    ||||||||| | |||||| ||| || |||||||||||| |||||  ||||||||||||||||||||||  |||||| |||||    
T  52442780 ctaccccaactctctctccaatgttctcatttctaatcttatcttgtctagtcttaccacacatccaacacaacatcctcat 52442861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 133
Target Start/End: Original strand, 43375742 - 43375814
Alignment:
Q  61 cctctagtgatcagactatcctcaatttgatatactctctttcctacaaaatctataagtcttctctctacat 133  Q
    |||||||||||   ||||||| | || |||| |||||||||| ||||| |||||||| |||||||||||||||    
T  43375742 cctctagtgattttactatccaccatctgatctactctctttactacataatctataggtcttctctctacat 43375814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 209 - 268
Target Start/End: Original strand, 52633471 - 52633530
Alignment:
Q  209 ttgtcatttctaatcctatctcatctagtcttaccacacatccaatgcaacattctcatc 268  Q
    |||||||||||| || |||| |||||||||||||| ||||| ||| ||||||| ||||||    
T  52633471 ttgtcatttctagtcttatcacatctagtcttaccgcacattcaacgcaacatcctcatc 52633530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 261
Target Start/End: Original strand, 4590813 - 4590875
Alignment:
Q  200 ctctctaat-ttgtcatttctaatcctatctcatctagtcttaccacacatccaatgcaacat 261  Q
    ||||||||| |||||||||||||||||||||  |||||||| ||| ||||| ||| |||||||    
T  4590813 ctctctaatattgtcatttctaatcctatcttgtctagtctcaccgcacattcaacgcaacat 4590875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 104 - 170
Target Start/End: Complemental strand, 17815556 - 17815490
Alignment:
Q  104 ctacaaaatctataagtcttctctctacataatcaaaccacctaaacctattttccaccatcttttc 170  Q
    ||||| |||||||||| | |||||||||||   ||||||| |||| |||| ||||||||||||||||    
T  17815556 ctacataatctataagccatctctctacatgcccaaaccaactaagcctagtttccaccatcttttc 17815490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 61 - 171
Target Start/End: Complemental strand, 26016564 - 26016454
Alignment:
Q  61 cctctagtgatcagactatcctcaatttgatatactctctttcctacaaaatctataagtcttctctctacataatcaaaccacctaaacctattttcca 160  Q
    |||||||||||| ||||  |||  || |||| || |||| || ||||| |||  ||| ||||||| ||||||||  ||||||||||||| ||| |||| |    
T  26016564 cctctagtgatctgactccccttcatctgatctaatctccttgctacagaatgcataggtcttctttctacatacccaaaccacctaaatctagtttcta 26016465  T
Q  161 ccatcttttct 171  Q
    |||||||||||    
T  26016464 ccatcttttct 26016454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 267
Target Start/End: Original strand, 39422340 - 39422398
Alignment:
Q  209 ttgtcatttctaatcctatctcatctagtcttaccacacatccaatgcaacattctcat 267  Q
    |||||||||||||| ||||||||| || || ||||||||||| ||  ||||||||||||    
T  39422340 ttgtcatttctaattctatctcatataatcctaccacacatctaacacaacattctcat 39422398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 104 - 174
Target Start/End: Complemental strand, 51812609 - 51812539
Alignment:
Q  104 ctacaaaatctataagtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctact 174  Q
    |||||||||||| || | ||||||||||||   |||| ||| ||| |||| ||||||||||||||||||||    
T  51812609 ctacaaaatctacaatttttctctctacatgcccaaatcacataagcctagtttccaccatcttttctact 51812539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 261
Target Start/End: Complemental strand, 6641112 - 6641063
Alignment:
Q  212 tcatttctaatcctatctcatctagtcttaccacacatccaatgcaacat 261  Q
    ||||||||||| ||||  ||||||||| |||||||||||||| |||||||    
T  6641112 tcatttctaattctatgccatctagtcataccacacatccaacgcaacat 6641063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 93 - 174
Target Start/End: Complemental strand, 17275291 - 17275210
Alignment:
Q  93 tactctctttcctacaaaatctataagtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctact 174  Q
    ||||||| || |||||||||||| | |  ||||||||||||   |||||||||||| || | ||||||| ||||||||||||    
T  17275291 tactctccttactacaaaatctacagggattctctctacatgcacaaaccacctaagccaagtttccacaatcttttctact 17275210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 268
Target Start/End: Original strand, 34827403 - 34827460
Alignment:
Q  211 gtcatttctaatcctatctcatctagtcttaccacacatccaatgcaacattctcatc 268  Q
    ||||||||||||| ||| || |||||||||||||| |||||||  |||||| ||||||    
T  34827403 gtcatttctaatcttatatcgtctagtcttaccactcatccaacacaacatcctcatc 34827460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 137 - 185
Target Start/End: Original strand, 2500067 - 2500115
Alignment:
Q  137 caaaccacctaaacctattttccaccatcttttctactttaggtgctat 185  Q
    |||| ||||||||| ||||||||| ||||||||||||| |||| |||||    
T  2500067 caaatcacctaaacatattttccatcatcttttctactataggggctat 2500115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 88 - 184
Target Start/End: Original strand, 3819038 - 3819134
Alignment:
Q  88 tgatatactctctttcctacaaaatctataagtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgcta 184  Q
    |||| |||||||||| ||| | |||| | ||||||||| |||||||   |||||||| |||  ||| || ||||||||||||||||  |||||||||    
T  3819038 tgatctactctctttactagagaatccacaagtcttctttctacatgcccaaaccacttaagtctagttaccaccatcttttctaccataggtgcta 3819134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 120 - 184
Target Start/End: Complemental strand, 4380081 - 4380017
Alignment:
Q  120 tcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgcta 184  Q
    ||||||||||||||    ||||||||||| | || |||||||||||||||||||| ||| |||||    
T  4380081 tcttctctctacatgtataaaccacctaaccttagtttccaccatcttttctactatagttgcta 4380017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 212 - 264
Target Start/End: Complemental strand, 4781357 - 4781305
Alignment:
Q  212 tcatttctaatcctatctcatctagtcttaccacacatccaatgcaacattct 264  Q
    ||||| |||||||| ||||||||||| || ||||||||||| || ||||||||    
T  4781357 tcattcctaatcctgtctcatctagtatttccacacatccattgtaacattct 4781305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 236 - 264
Target Start/End: Complemental strand, 12230983 - 12230955
Alignment:
Q  236 gtcttaccacacatccaatgcaacattct 264  Q
    |||||||||||||||||||||||||||||    
T  12230983 gtcttaccacacatccaatgcaacattct 12230955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 77 - 161
Target Start/End: Original strand, 16272992 - 16273076
Alignment:
Q  77 tatcctcaatttgatatactctctttcctacaaaatctataagtcttctctctacataatcaaaccacctaaacctattttccac 161  Q
    ||||||| |||||||  |||||  || ||| | |||||| |||| ||||||||| ||   |||||||||||||||||||||||||    
T  16272992 tatcctctatttgatccactcttcttactatagaatctacaagttttctctctaaatgtacaaaccacctaaacctattttccac 16273076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 268
Target Start/End: Complemental strand, 16943218 - 16943099
Alignment:
Q  145 ctaaacctattttccaccatcttttctactttaggtgctatgctaccccaattttctctctaat-ttgtcatttctaatcctatctcatctagtcttacc 243  Q
    ||||| ||| |||||||||||||||||||| ||||     | ||||||||| | |||| ||||| |||| || ||||||  |||||| |||||||||| |    
T  16943218 ctaaatctagtttccaccatcttttctactatagg-----tactaccccaactctctccctaatattgtaatgtctaattttatctcgtctagtcttatc 16943124  T
Q  244 acacatccaatgcaacattctcatc 268  Q
    || |||||||  ||| |||||||||    
T  16943123 acgcatccaacacaatattctcatc 16943099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 212 - 268
Target Start/End: Original strand, 17143179 - 17143235
Alignment:
Q  212 tcatttctaatcctatctcatctagtcttaccacacatccaatgcaacattctcatc 268  Q
    ||||||||||| ||| |   |||||||||| | ||||||||||||||||||||||||    
T  17143179 tcatttctaattctaccatgtctagtcttagcgcacatccaatgcaacattctcatc 17143235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 268
Target Start/End: Complemental strand, 26016397 - 26016361
Alignment:
Q  232 tctagtcttaccacacatccaatgcaacattctcatc 268  Q
    |||||||||||||||||||||| ||||||| ||||||    
T  26016397 tctagtcttaccacacatccaacgcaacatcctcatc 26016361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 199 - 246
Target Start/End: Original strand, 33561077 - 33561125
Alignment:
Q  199 tctctctaat-ttgtcatttctaatcctatctcatctagtcttaccaca 246  Q
    |||||||||| |||||||||| ||||||||| ||| |||||||||||||    
T  33561077 tctctctaatgttgtcatttccaatcctatcccatttagtcttaccaca 33561125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 138 - 245
Target Start/End: Original strand, 52561843 - 52561946
Alignment:
Q  138 aaaccacctaaacctattttccaccatcttttctactttaggtgctatgctaccccaattttctctctaat-ttgtcatttctaatcctatctcatctag 236  Q
    ||||||||||| ||||||||| | |||| ||||||||  |||     ||||||||||| | ||||||||||  ||||||| |||||| |||| | |||||    
T  52561843 aaaccacctaagcctattttctatcatcatttctactaaagg-----tgctaccccaactctctctctaatggtgtcattcctaatcatatcccgtctag 52561937  T
Q  237 tcttaccac 245  Q
    |||||||||    
T  52561938 tcttaccac 52561946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 58; Significance: 2e-24; HSPs: 58)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 59 - 184
Target Start/End: Complemental strand, 43475369 - 43475244
Alignment:
Q  59 ttcctctagtgatcagactatcctcaatttgatatactctctttcctacaaaatctataagtcttctctctacataatcaaaccacctaaacctattttc 158  Q
    ||||| |||||||| |||||||||| || |||| ||||||| || |||||| ||||| | |||||||||||  |||  |||||||||||| |||| ||||    
T  43475369 ttcctatagtgatctgactatcctccatctgatctactctccttactacaacatctacaggtcttctctctgaatacccaaaccacctaagcctagtttc 43475270  T
Q  159 caccatcttttctactttaggtgcta 184  Q
    |||||||||||||||| |||||||||    
T  43475269 caccatcttttctactataggtgcta 43475244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 117 - 253
Target Start/End: Complemental strand, 6889064 - 6888932
Alignment:
Q  117 aagtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgctatgctaccccaattttctctctaat-ttgtcat 215  Q
    |||||||||||||||||   |||||||| ||| |||||||||||||||||||||  || || ||||||     |||||| | | ||| |||| |||||||    
T  6889064 aagtcttctctctacatgtccaaaccacttaagcctattttccaccatcttttcctctatacgtgcta-----ccccaactctttctgtaatattgtcat 6888970  T
Q  216 ttctaatcctatctcatctagtcttaccacacatccaa 253  Q
    |||||||| |||||||||||||||||||||||||||||    
T  6888969 ttctaatcatatctcatctagtcttaccacacatccaa 6888932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 61 - 181
Target Start/End: Original strand, 7359415 - 7359534
Alignment:
Q  61 cctctagtgatcagactatcctcaatttgatatactctctttcctacaaaatctataagtcttctctctacataatcaaaccacctaaacctattttcca 160  Q
    |||||||||||  |||||||||| || |||| ||||||| || ||||| |||||| |  ||||||||||||||   ||||||||||||||||||||||||    
T  7359415 cctctagtgatatgactatcctccatctgatctactctccttactacagaatctacatatcttctctctacatgc-caaaccacctaaacctattttcca 7359513  T
Q  161 ccatcttttctactttaggtg 181  Q
    |||| ||||||||| ||||||    
T  7359514 ccatattttctactataggtg 7359534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 61 - 168
Target Start/End: Complemental strand, 21093879 - 21093772
Alignment:
Q  61 cctctagtgatcagactatcctcaatttgatatactctctttcctacaaaatctataagtcttctctctacataatcaaaccacctaaacctattttcca 160  Q
    |||||||||||| |||||||||| || |||| |||||||||| |||||||||||  |||||||| ||||||||   ||||| |||||| |||||||||||    
T  21093879 cctctagtgatctgactatcctccatctgatctactctctttactacaaaatctccaagtcttccctctacatgcccaaactacctaagcctattttcca 21093780  T
Q  161 ccatcttt 168  Q
    ||| ||||    
T  21093779 ccaacttt 21093772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 187 - 268
Target Start/End: Original strand, 28186944 - 28187026
Alignment:
Q  187 ctaccccaattttctctctaat-ttgtcatttctaatcctatctcatctagtcttaccacacatccaatgcaacattctcatc 268  Q
    |||||||||  ||||||||||| |||||||||||||||||| |   |||||||||||||||||||||||||||||||||||||    
T  28186944 ctaccccaaccttctctctaatgttgtcatttctaatcctaccatgtctagtcttaccacacatccaatgcaacattctcatc 28187026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 61 - 180
Target Start/End: Complemental strand, 79640 - 79521
Alignment:
Q  61 cctctagtgatcagactatcctcaatttgatatactctctttcctacaaaatctataagtcttctctctacataatcaaaccacctaaacctattttcca 160  Q
    ||||| |||||| ||| |||||| |||||||  |||||| || ||||| |||||||| |||||||||||||||   ||||||||||||   | |||||||    
T  79640 cctcttgtgatccgaccatcctccatttgatcgactctccttactacagaatctataggtcttctctctacatgtccaaaccacctaattatgttttcca 79541  T
Q  161 ccatcttttctactttaggt 180  Q
    |||||||||||||| |||||    
T  79540 ccatcttttctactataggt 79521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 93 - 270
Target Start/End: Original strand, 10082926 - 10083098
Alignment:
Q  93 tactctctttcctacaaaatctataagtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgctatgctaccc 192  Q
    |||||||||| ||||| |||| | |||||||||||||||||    ||||||| |||  ||| |||| ||||||||||||||| ||||     || |||||    
T  10082926 tactctctttactacagaatccacaagtcttctctctacatgccgaaaccacttaagtctagtttctaccatcttttctactatagg-----tgataccc 10083020  T
Q  193 caattttctctctaat-ttgtcatttctaatcctatctcatctagtcttaccacacatccaatgcaacattctcatccc 270  Q
    ||||  |||| ||||| || ||||||||||| ||||| | |||||||||||||||||| ||| ||||||| ||||||||    
T  10083021 caatgctctccctaatgttctcatttctaattctatcccgtctagtcttaccacacat-caaagcaacatcctcatccc 10083098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 137 - 253
Target Start/End: Complemental strand, 14667814 - 14667696
Alignment:
Q  137 caaaccacctaaacctattttccaccatcttttctactttaggtgctatgctaccccaattt-tctctctaat-ttgtcatttctaatcctatctcatct 234  Q
    ||||||||||||  |||||||||||||||||||||||| |||||||||  | | | |  | | |||||||||| |||||||||||||| ||| |||||||    
T  14667814 caaaccacctaagtctattttccaccatcttttctactataggtgctaccccaactctctctctctctctaatattgtcatttctaattctacctcatct 14667715  T
Q  235 agtcttaccacacatccaa 253  Q
    ||||||| |||||||||||    
T  14667714 agtcttatcacacatccaa 14667696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 119 - 280
Target Start/End: Original strand, 2075687 - 2075845
Alignment:
Q  119 gtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgctatgctaccccaattttctctctaat-ttgtcattt 217  Q
    |||||||||||||||   ||||||| |||| |||||| || |||| |||||||||| |||||| ||     |||| | | |||||||||| ||||||||     
T  2075687 gtcttctctctacatgcccaaaccatctaagcctattgtctaccaacttttctactgtaggtgtta-----cccccactctctctctaatgttgtcattc 2075781  T
Q  218 ctaatcctatctcatctagtcttaccacacatccaatgcaacattctcatc-ccgctacactta 280  Q
    ||||||||||||  ||||||||||| || ||||||| ||||||| |||||| | ||||||||||    
T  2075782 ctaatcctatcttgtctagtcttacaactcatccaacgcaacatcctcatctctgctacactta 2075845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 200 - 262
Target Start/End: Complemental strand, 9235062 - 9234999
Alignment:
Q  200 ctctctaat-ttgtcatttctaatcctatctcatctagtcttaccacacatccaatgcaacatt 262  Q
    ||||||||| ||||||||| |||||||||| | |||||||||||||||||||||||||||||||    
T  9235062 ctctctaatgttgtcatttataatcctatcccgtctagtcttaccacacatccaatgcaacatt 9234999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 199 - 251
Target Start/End: Original strand, 683980 - 684033
Alignment:
Q  199 tctctctaat-ttgtcatttctaatcctatctcatctagtcttaccacacatcc 251  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||||||||    
T  683980 tctctctaatattgtcatttctaattctatctcatctagtcttaccacacatcc 684033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 119 - 280
Target Start/End: Original strand, 16347591 - 16347749
Alignment:
Q  119 gtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgctatgctaccccaattttctctctaat-ttgtcattt 217  Q
    |||||||||||||||   ||||||| |||| ||||||||| |||| |||||||||| ||||     |||||||||   | ||||||||||  | ||||||    
T  16347591 gtcttctctctacatgtccaaaccatctaagcctattttctaccaacttttctactatagg-----tgctacccccgctctctctctaatggtttcattt 16347685  T
Q  218 ctaatcctatctcatctagtcttaccacacatccaatgcaacattctcatc-ccgctacactta 280  Q
     ||||| ||| |  |||||||||||||| ||||||| ||||||| |||||| ||||||||||||    
T  16347686 ttaatcatatattgtctagtcttaccactcatccaacgcaacatcctcatctccgctacactta 16347749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 121 - 268
Target Start/End: Complemental strand, 21952424 - 21952275
Alignment:
Q  121 cttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgctatgctaccccaattttctctct--aatt-tgtcattt 217  Q
    |||||||||||||   |||||||||| |  ||| ||||  |||||||||||||| |||||| | || ||||||||   |||||||  |||  ||||||||    
T  21952424 cttctctctacatgtccaaaccacctgagtctagtttctgccatcttttctactataggtg-tgtgttaccccaaccctctctctttaatgctgtcattt 21952326  T
Q  218 ctaatcctatctcatctagtcttaccacacatccaatgcaacattctcatc 268  Q
    |||||| |||||| |||||||||||||||||| ||| ||||||| ||||||    
T  21952325 ctaatcttatctcgtctagtcttaccacacatgcaacgcaacatcctcatc 21952275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 120 - 268
Target Start/End: Complemental strand, 1275332 - 1275189
Alignment:
Q  120 tcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgctatgctaccccaattttctctctaat-ttgtcatttc 218  Q
    ||||||||||||||   ||||||| |||| ||||||||| |||| |||||||||| |||||||||      ||| | | ||||||||||  ||||||| |    
T  1275332 tcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgcta------ccccactctctctctaatggtgtcattcc 1275239  T
Q  219 taatcctatctcatctagtcttaccacacatccaatgcaacattctcatc 268  Q
    |||||||| |   |||||||||||||| ||||||| ||||||| ||||||    
T  1275238 taatcctaccatgtctagtcttaccactcatccaacgcaacatcctcatc 1275189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 199 - 268
Target Start/End: Original strand, 11002709 - 11002779
Alignment:
Q  199 tctctctaat-ttgtcatttctaatcctatctcatctagtcttaccacacatccaatgcaacattctcatc 268  Q
    |||||||||| |||||||||||||| ||||| ||||| |||||||||||||||||  ||||||| ||||||    
T  11002709 tctctctaatgttgtcatttctaattctatcccatctcgtcttaccacacatccagcgcaacatcctcatc 11002779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 74 - 268
Target Start/End: Original strand, 41109908 - 41110099
Alignment:
Q  74 gactatcctcaatttgatatactctctttcctacaaaatctataagtcttctctctacataatcaaaccacctaaacctattttccacca---tcttttc 170  Q
    |||||||||| ||  ||| |||| || || |||||||||||||| | |||||||||||||  |||||||||||||  | | |||||||||   ||||||     
T  41109908 gactatcctccatccgatctactatccttactacaaaatctataggccttctctctacatgttcaaaccacctaaggccagtttccaccaccatcttttt 41110007  T
Q  171 tactttaggtgctatgctaccccaattttctctctaat-ttgtcatttctaatcctatctcatctagtcttaccacacatccaatgcaacattctcatc 268  Q
     ||| |||||||||||| | |       |||||||| | |||||||||||||||||||  |||||||||| || |||||||||  |||||||| |||||    
T  41110008 aactataggtgctatgccaac-------tctctctagtgttgtcatttctaatcctattccatctagtctcactacacatccagcgcaacattttcatc 41110099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 88 - 174
Target Start/End: Complemental strand, 42199386 - 42199300
Alignment:
Q  88 tgatatactctctttcctacaaaatctataagtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctact 174  Q
    |||| ||||||| || ||||| |||||| | |||||||||||||||   ||||||||||||  ||| ||||||||||||||||||||    
T  42199386 tgatctactctccttactacagaatctacatgtcttctctctacatgcccaaaccacctaagtctagtttccaccatcttttctact 42199300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 119 - 184
Target Start/End: Complemental strand, 20456842 - 20456777
Alignment:
Q  119 gtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgcta 184  Q
    |||||||||||||||  |||||||| |||| ||||||||| |||| |||||||||| |||||||||    
T  20456842 gtcttctctctacatgttcaaaccatctaagcctattttctaccaacttttctactataggtgcta 20456777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 136 - 184
Target Start/End: Complemental strand, 27945 - 27897
Alignment:
Q  136 tcaaaccacctaaacctattttccaccatcttttctactttaggtgcta 184  Q
    ||||||||||||| ||||||||||| ||||||||||||| |||||||||    
T  27945 tcaaaccacctaagcctattttccatcatcttttctactataggtgcta 27897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 199 - 261
Target Start/End: Complemental strand, 5305610 - 5305547
Alignment:
Q  199 tctctctaat-ttgtcatttctaatcctatctcatctagtcttaccacacatccaatgcaacat 261  Q
    |||||||||| |||| ||||||||| ||||||  |||||||||||||||||||||| |||||||    
T  5305610 tctctctaatgttgttatttctaattctatcttgtctagtcttaccacacatccaacgcaacat 5305547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 209 - 268
Target Start/End: Complemental strand, 7678463 - 7678404
Alignment:
Q  209 ttgtcatttctaatcctatctcatctagtcttaccacacatccaatgcaacattctcatc 268  Q
    ||||||||||||||||||||  |||||||||| ||||| |||||| ||||||| ||||||    
T  7678463 ttgtcatttctaatcctatcctatctagtcttgccacagatccaacgcaacatcctcatc 7678404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 201 - 267
Target Start/End: Complemental strand, 21093768 - 21093701
Alignment:
Q  201 tctctaat-ttgtcatttctaatcctatctcatctagtcttaccacacatccaatgcaacattctcat 267  Q
    |||||||| |||||||||||||| | ||| |||||||||||||||||||| ||| ||||||| |||||    
T  21093768 tctctaatattgtcatttctaattccatcacatctagtcttaccacacatacaacgcaacatcctcat 21093701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 119 - 280
Target Start/End: Complemental strand, 24178579 - 24178421
Alignment:
Q  119 gtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgctatgctaccccaattttctctctaatt-tgtcattt 217  Q
    |||||||||| ||||   ||||||| |||| ||||||||| |||| |||||||||| |||||||||     |||| | | ||||||||||  |||||||     
T  24178579 gtcttctctccacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgcta-----cccccactctctctctaatggtgtcattc 24178485  T
Q  218 ctaatcctatctcatctagtcttaccacacatccaatgcaacattctcatc-ccgctacactta 280  Q
     ||||||||||   | |||||||||||| ||||||| ||||||| |||||| | ||||||||||    
T  24178484 ttaatcctatcatgtatagtcttaccactcatccaacgcaacatcctcatctctgctacactta 24178421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 209 - 267
Target Start/End: Original strand, 6368224 - 6368282
Alignment:
Q  209 ttgtcatttctaatcctatctcatctagtcttaccacacatccaatgcaacattctcat 267  Q
    |||||||||||||| ||||||| |||| |||||||||||||| || ||||||| |||||    
T  6368224 ttgtcatttctaattctatctcgtctattcttaccacacatctaacgcaacatcctcat 6368282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 119 - 184
Target Start/End: Original strand, 1287792 - 1287857
Alignment:
Q  119 gtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgcta 184  Q
    |||||||||||||||   ||||||| |||| ||||||||| |||| |||||||||| |||||||||    
T  1287792 gtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgcta 1287857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 104 - 249
Target Start/End: Original strand, 4026533 - 4026673
Alignment:
Q  104 ctacaaaatctataagtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgctatgctaccccaattttctct 203  Q
    ||||| |||||| | |||| ||||||||||   ||||||||||||  ||| ||||||||||||||| ||||||| |     || |||||||| | |||||    
T  4026533 ctacagaatctacaggtctcctctctacatgtccaaaccacctaagactagtttccaccatcttttttactttacg-----tgttaccccaactctctct 4026627  T
Q  204 ctaatttgtcatttctaatcctatctcatctagtcttaccacacat 249  Q
      |  || || ||| ||||| |||||||||||||||||||||||||    
T  4026628 tcatgttctcgtttttaatcttatctcatctagtcttaccacacat 4026673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 119 - 184
Target Start/End: Complemental strand, 4496453 - 4496388
Alignment:
Q  119 gtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgcta 184  Q
    |||||||||||||||   ||||||| |||| ||||||||| |||| |||||||||| |||||||||    
T  4496453 gtcttctctctacatgcccaaaccatctaagcctattttctaccagcttttctactataggtgcta 4496388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 61 - 158
Target Start/End: Original strand, 15986892 - 15986989
Alignment:
Q  61 cctctagtgatcagactatcctcaatttgatatactctctttcctacaaaatctataagtcttctctctacataatcaaaccacctaaacctattttc 158  Q
    ||||| |||||| |||||||||| |||||||  |||||| || ||| | |||||| |  |||||||||||||    ||||||||||||||||||||||    
T  15986892 cctcttgtgatctgactatcctccatttgatccactctccttactatagaatctacatatcttctctctacacgcccaaaccacctaaacctattttc 15986989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 91 - 172
Target Start/End: Original strand, 18131921 - 18132002
Alignment:
Q  91 tatactctctttcctacaaaatctataagtcttctctctacataatcaaaccacctaaacctattttccaccatcttttcta 172  Q
    |||||||  ||| ||||||||||   |||| || |||||||||  |||||||||||||| | ||||||||||||||||||||    
T  18131921 tatactccttttactacaaaatcagcaagtattatctctacatgctcaaaccacctaaatcaattttccaccatcttttcta 18132002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 119 - 184
Target Start/End: Complemental strand, 28676664 - 28676599
Alignment:
Q  119 gtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgcta 184  Q
    |||||||||||||||    |||||||||||  |||||||||||||||||||||||| ||| |||||    
T  28676664 gtcttctctctacatgccgaaaccacctaagactattttccaccatcttttctactatagctgcta 28676599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 119 - 184
Target Start/End: Original strand, 28977072 - 28977137
Alignment:
Q  119 gtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgcta 184  Q
    |||||||||||||||   ||||||| |||| ||||||||| |||| |||||||||| |||||||||    
T  28977072 gtcttctctctacatgcacaaaccatctaagcctattttctaccaacttttctactataggtgcta 28977137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 119 - 184
Target Start/End: Original strand, 31636133 - 31636198
Alignment:
Q  119 gtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgcta 184  Q
    |||||||||||||||   ||||||||||||  ||| |||| ||||||||||||||| |||||||||    
T  31636133 gtcttctctctacatgcccaaaccacctaagtctagtttctaccatcttttctactataggtgcta 31636198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 138 - 253
Target Start/End: Complemental strand, 32516606 - 32516497
Alignment:
Q  138 aaaccacctaaacctattttccaccatcttttctactttaggtgctatgctaccccaattttctctctaat-ttgtcatttctaatcctatctcatctag 236  Q
    ||||||||||| ||||||||||||||||||||||||| || |     || ||| ||||   |||||||||| |||||||||||||  |||||   |||||    
T  32516606 aaaccacctaagcctattttccaccatcttttctactataag-----tgttactccaa--ctctctctaatgttgtcatttctaagtctatcctgtctag 32516514  T
Q  237 tcttaccacacatccaa 253  Q
    |||||||||||||||||    
T  32516513 tcttaccacacatccaa 32516497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 119 - 184
Target Start/End: Complemental strand, 33667285 - 33667220
Alignment:
Q  119 gtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgcta 184  Q
    |||||||||||||||   ||||||||||||  ||| |||| ||||||||||||||| |||||||||    
T  33667285 gtcttctctctacatgcccaaaccacctaagtctagtttctaccatcttttctactataggtgcta 33667220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 119 - 184
Target Start/End: Complemental strand, 38685036 - 38684971
Alignment:
Q  119 gtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgcta 184  Q
    |||||||||||||||   ||||||| |||| ||||||||| |||| |||||||||| |||||||||    
T  38685036 gtcttctctctacatgtccaaaccatctaagcctattttctaccaacttttctactataggtgcta 38684971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 91 - 172
Target Start/End: Complemental strand, 43522704 - 43522623
Alignment:
Q  91 tatactctctttcctacaaaatctataagtcttctctctacataatcaaaccacctaaacctattttccaccatcttttcta 172  Q
    |||||||  ||| |||||||||| | |||| || |||||| ||  |||||||||||||| | ||||||||||||||||||||    
T  43522704 tatactccttttactacaaaatcaacaagtattatctctatatgctcaaaccacctaaatcaattttccaccatcttttcta 43522623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 268
Target Start/End: Original strand, 219727 - 219811
Alignment:
Q  185 tgctaccccaattttctctctaat-ttgtcatttctaatcctatctcatctagtcttaccacacatccaatgcaacattctcatc 268  Q
    ||||||||||| | |||||| ||| ||||||||  ||||| |||||| ||| |||||| ||| ||||||| ||||||||||||||    
T  219727 tgctaccccaactctctctccaatgttgtcattcgtaatcttatctcgtcttgtcttaacacgcatccaacgcaacattctcatc 219811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 267
Target Start/End: Original strand, 16134480 - 16134536
Alignment:
Q  211 gtcatttctaatcctatctcatctagtcttaccacacatccaatgcaacattctcat 267  Q
    ||||||||||||  |||||||||||||||||||| ||||||||  |||||| |||||    
T  16134480 gtcatttctaattttatctcatctagtcttaccatacatccaacacaacatcctcat 16134536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 104 - 184
Target Start/End: Complemental strand, 27249304 - 27249224
Alignment:
Q  104 ctacaaaatctataagtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgcta 184  Q
    |||||||||||| | |||||||| |||||   ||||||||||||| |||| |||||||  ||||||||||| | |||||||    
T  27249304 ctacaaaatctacaggtcttctccctacaagctcaaaccacctaagcctaatttccactttcttttctactatgggtgcta 27249224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 210 - 280
Target Start/End: Original strand, 1287889 - 1287960
Alignment:
Q  210 tgtcatttctaatcctatctcatctagtcttaccacacatccaatgcaacattctcatc-ccgctacactta 280  Q
    ||||||| |||||||||||   |||||||||||||| ||||||| ||||||| |||||| | ||||||||||    
T  1287889 tgtcattcctaatcctatcatgtctagtcttaccactcatccaacgcaacatcctcatctctgctacactta 1287960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 137 - 184
Target Start/End: Complemental strand, 15168843 - 15168796
Alignment:
Q  137 caaaccacctaaacctattttccaccatcttttctactttaggtgcta 184  Q
    |||||||||| | ||||||||| ||||||||||||||| |||||||||    
T  15168843 caaaccaccttagcctattttctaccatcttttctactataggtgcta 15168796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 137 - 172
Target Start/End: Complemental strand, 30588500 - 30588465
Alignment:
Q  137 caaaccacctaaacctattttccaccatcttttcta 172  Q
    |||||||| |||||||||||||||||||||||||||    
T  30588500 caaaccacttaaacctattttccaccatcttttcta 30588465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 93 - 184
Target Start/End: Complemental strand, 37124662 - 37124571
Alignment:
Q  93 tactctctttcctacaaaatctataagtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgcta 184  Q
    ||||||| || ||||| ||| |||| |||||||||| ||| | |||||  || ||| ||||||||||| ||||||||| ||| |||||||||    
T  37124662 tactctccttactacataatatataggtcttctctcaacaaactcaaatgacttaagcctattttccatcatcttttcaactataggtgcta 37124571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 184
Target Start/End: Complemental strand, 2713070 - 2712948
Alignment:
Q  62 ctctagtgatcagactatcctcaatttgatatactctctttcctacaaaatctataagtcttctctctacataatcaaaccacctaaacctattttccac 161  Q
    ||||||||||  |||| ||||| || |||| ||||||| ||| |||| |||| | | |||||||||||||||   ||||||||||||  ||| | || ||    
T  2713070 ctctagtgatttgactctcctccatctgatctactctccttcatacagaatccacaggtcttctctctacatgcccaaaccacctaagtctagtctctac 2712971  T
Q  162 catcttttctactttaggtgcta 184  Q
    ||||||||  ||| |||||||||    
T  2712970 catcttttagactataggtgcta 2712948  T

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Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 280
Target Start/End: Original strand, 5848401 - 5848447
Alignment:
Q  235 agtcttaccacacatccaatgcaacattctcatc-ccgctacactta 280  Q
    ||||||||||||||||||||||||||| |||||| | ||||||||||    
T  5848401 agtcttaccacacatccaatgcaacatcctcatctctgctacactta 5848447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 184
Target Start/End: Complemental strand, 25938035 - 25937973
Alignment:
Q  122 ttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgcta 184  Q
    ||||||||| ||  ||||||||||||||||| | ||||||||| ||||||||| ||| |||||    
T  25938035 ttctctctatatgctcaaaccacctaaacctttcttccaccattttttctactatagatgcta 25937973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 119 - 169
Target Start/End: Complemental strand, 27998528 - 27998478
Alignment:
Q  119 gtcttctctctacataatcaaaccacctaaacctattttccaccatctttt 169  Q
    ||||||||||||||||||||||| || ||| |||| ||||| |||||||||    
T  27998528 gtcttctctctacataatcaaactacttaagcctagtttcccccatctttt 27998478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 138 - 172
Target Start/End: Complemental strand, 29938165 - 29938131
Alignment:
Q  138 aaaccacctaaacctattttccaccatcttttcta 172  Q
    ||||||||||| |||||||||||||||||||||||    
T  29938165 aaaccacctaagcctattttccaccatcttttcta 29938131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 261
Target Start/End: Complemental strand, 30588446 - 30588384
Alignment:
Q  200 ctctctaat-ttgtcatttctaatcctatctcatctagtcttaccacacatccaatgcaacat 261  Q
    ||||||||| ||||||||||||||| |||||||| |  ||||||||||||||| | |||||||    
T  30588446 ctctctaatattgtcatttctaatcatatctcatttgatcttaccacacatcccacgcaacat 30588384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 184
Target Start/End: Complemental strand, 3301913 - 3301848
Alignment:
Q  119 gtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgcta 184  Q
    |||||||||||||||   ||||||| |||| ||||||||| |||| |||||||||| |||| ||||    
T  3301913 gtcttctctctacatgtccaaaccatctaagcctattttctaccaacttttctactataggggcta 3301848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 184
Target Start/End: Original strand, 18351061 - 18351186
Alignment:
Q  60 tcctctagtgatcagactatcctcaatttgatatactctctttcctacaaaatctataagtcttctctctaca-taatcaaaccacctaaacctattttc 158  Q
    ||||||||||||  || || ||||  |||||| ||||||| ||  | || |||||| | |||||||||||||| |   |||||||||||| |||| ||||    
T  18351061 tcctctagtgatttgattaccctccttttgatctactctccttattgcataatctacaggtcttctctctacaatgcccaaaccacctaagcctagtttc 18351160  T
Q  159 caccatcttttctactttaggtgcta 184  Q
     ||||| ||||||||| |||||||||    
T  18351161 taccatattttctactataggtgcta 18351186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 280
Target Start/End: Complemental strand, 34272982 - 34272933
Alignment:
Q  232 tctagtcttaccacacatccaatgcaacattctcatc-ccgctacactta 280  Q
    |||||||||||||| ||||||||||||||| |||||| | ||||||||||    
T  34272982 tctagtcttaccactcatccaatgcaacatcctcatctctgctacactta 34272933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 184
Target Start/End: Complemental strand, 34273096 - 34273031
Alignment:
Q  119 gtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgcta 184  Q
    |||||||||||||||   ||||||| |||| ||||||||| |||| |||||||| | |||||||||    
T  34273096 gtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctattataggtgcta 34273031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 172
Target Start/End: Original strand, 43558032 - 43558093
Alignment:
Q  111 atctataagtcttctctctacataatcaaaccacctaaacctattttccaccatcttttcta 172  Q
    ||||| |||||||||||||| ||   |||||||||||| | || ||||||||||||||||||    
T  43558032 atctacaagtcttctctctatatgcccaaaccacctaagcttagtttccaccatcttttcta 43558093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 88 - 148
Target Start/End: Complemental strand, 9235164 - 9235104
Alignment:
Q  88 tgatatactctctttcctacaaaatctataagtcttctctctacataatcaaaccacctaa 148  Q
    |||| ||||||| || ||||| |||||| |||||||||||||||||  ||||| |||||||    
T  9235164 tgatctactctcgttactacagaatctacaagtcttctctctacatgctcaaaacacctaa 9235104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 61 - 173
Target Start/End: Original strand, 15489647 - 15489759
Alignment:
Q  61 cctctagtgatcagactatcctcaatttgatatactctctttcctacaaaatctataagtcttctctctacataatcaaaccacctaaacctattttcca 160  Q
    |||||||||||   ||||||||| || | || ||||||| ||  ||||||||||| || ||||||||||||||   ||||||| |||| |  | |||| |    
T  15489647 cctctagtgattcaactatcctccatctaatctactctccttaatacaaaatctacaaatcttctctctacatgcccaaaccatctaagctgagtttcaa 15489746  T
Q  161 ccatcttttctac 173  Q
    |||||||||||||    
T  15489747 ccatcttttctac 15489759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 268
Target Start/End: Complemental strand, 27998383 - 27998347
Alignment:
Q  232 tctagtcttaccacacatccaatgcaacattctcatc 268  Q
    |||||||||||||||||||||| ||||||| ||||||    
T  27998383 tctagtcttaccacacatccaacgcaacatcctcatc 27998347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 268
Target Start/End: Original strand, 43558136 - 43558172
Alignment:
Q  232 tctagtcttaccacacatccaatgcaacattctcatc 268  Q
    |||||||||||||||||||||| ||||||| ||||||    
T  43558136 tctagtcttaccacacatccaacgcaacatcctcatc 43558172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 54; Significance: 5e-22; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 119 - 267
Target Start/End: Complemental strand, 33084127 - 33083983
Alignment:
Q  119 gtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgctatgctaccccaattttctctctaat-ttgtcattt 217  Q
    |||||||||||||||   ||||||||||||  ||| |||| ||||||||||||||  ||||     ||||||||||| | |||||||||| | |||||||    
T  33084127 gtcttctctctacattcccaaaccacctaagtctagtttctaccatcttttctaccatagg-----tgctaccccaactctctctctaatatcgtcattt 33084033  T
Q  218 ctaatcctatctcatctagtcttaccacacatccaatgcaacattctcat 267  Q
    ||||| ||||| |||||||||||||||||||||||| ||| ||| |||||    
T  33084032 ctaattctatcccatctagtcttaccacacatccaacgcagcatcctcat 33083983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 30 - 268
Target Start/End: Original strand, 9593826 - 9594070
Alignment:
Q  30 aatagtttgtcttataatttttcaaggaattcctctag----tgatcagactatcctcaatttgatatactctctttcctacaaaatctataagtcttct 125  Q
    |||||||| |||||||||||||| |||  ||||||||     ||||  |||| ||||| || |||| ||||||  || |||||  ||||| | |||||||    
T  9593826 aatagtttctcttataatttttctaggtcttcctctacctcttgatttgactctcctccatctgatctactcttcttactacagcatctacatgtcttct 9593925  T
Q  126 ctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgcta-tgctaccccaattttctctctaat-ttgtcatttctaatc 223  Q
    ||||||||   |||||||||||| ||||||||| |||||||||||||||   |||||||   | || ||   | ||||||||||  ||||||| ||||||    
T  9593926 ctctacatgcccaaaccacctaagcctattttctaccatcttttctactaatggtgctaccccaactccctctctctctctaatggtgtcattcctaatc 9594025  T
Q  224 ctatctcatctagtcttaccacacatccaatgcaacattctcatc 268  Q
    ||||| | |||||||||||||| ||||||| ||||||| ||||||    
T  9594026 ctatcccgtctagtcttaccactcatccaacgcaacatcctcatc 9594070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 150 - 268
Target Start/End: Original strand, 12134145 - 12134259
Alignment:
Q  150 cctattttccaccatcttttctactttaggtgctatgctaccccaattttctctctaat-ttgtcatttctaatcctatctcatctagtcttaccacaca 248  Q
    ||||||||||||||||||||||||| |||||  ||     || ||||| |||||||||| |||||||||||||| |||| |||||| ||||| |||||||    
T  12134145 cctattttccaccatcttttctactataggtcgta-----cctcaattctctctctaatattgtcatttctaattctatatcatcttgtcttgccacaca 12134239  T
Q  249 tccaatgcaacattctcatc 268  Q
    |||||  |||||||||||||    
T  12134240 tccaacacaacattctcatc 12134259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 93 - 244
Target Start/End: Complemental strand, 2079435 - 2079288
Alignment:
Q  93 tactctctttcctacaaaatctataagtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgctatgctaccc 192  Q
    ||||||| || ||||| |||||| || |||||||||||||||   ||||||| ||| ||||||||||||||||||||||||| ||| |||||      ||    
T  2079435 tactctccttactacataatctacaaatcttctctctacatacctaaaccacttaagcctattttccaccatcttttctactatagatgcta------cc 2079342  T
Q  193 caattttctctctaat-ttgtcatttcta-atcctatctcatctagtcttacca 244  Q
    ||| |  ||||||||| |||||||||||| ||| |||||||| |||||||||||    
T  2079341 caactccctctctaatattgtcatttctatatcatatctcatttagtcttacca 2079288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 119 - 280
Target Start/End: Original strand, 5258361 - 5258521
Alignment:
Q  119 gtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgctatgctaccccaattt-tctctctaatt-tgtcatt 216  Q
    |||||||||||||||   ||||||| |||| ||||||||| |||| |||||||||| |||||||||     ||||| | | |||||||||   |||||||    
T  5258361 gtcttctctctacatgtccaaaccatctaagcctattttctaccaacttttctactataggtgctac----ccccactctctctctctaacggtgtcatt 5258456  T
Q  217 tctaatcctatctcatctagtcttaccacacatccaatgcaacattctcatc-ccgctacactta 280  Q
      |||||||||||  |||||||||||||| ||||||| |||||||||||| | ||||||||||||    
T  5258457 cataatcctatcttgtctagtcttaccactcatccaacgcaacattctcacctccgctacactta 5258521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 119 - 280
Target Start/End: Complemental strand, 28085445 - 28085287
Alignment:
Q  119 gtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgctatgctaccccaattttctctctaatt-tgtcattt 217  Q
    |||||||||||||||   ||||||| |||| ||||||||| |||| |||||||||| |||||||||     |||| | | ||||||||||  |||||||     
T  28085445 gtcttctctctacatggccaaaccatctaagcctattttctaccaacttttctactataggtgcta-----cccccactctctctctaatggtgtcattc 28085351  T
Q  218 ctaatcctatctcatctagtcttaccacacatccaatgcaacattctcatc-ccgctacactta 280  Q
     ||||||||||   |||||||||||||| ||||||| ||||||| |||||| | ||||||||||    
T  28085350 gtaatcctatcatgtctagtcttaccactcatccaacgcaacatcctcatctctgctacactta 28085287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 199 - 261
Target Start/End: Original strand, 33998292 - 33998355
Alignment:
Q  199 tctctctaattt-gtcatttctaatcctatctcatctagtcttaccacacatccaatgcaacat 261  Q
    |||||||||| | |||||||||||||||||| |||||||||||||||||||||||| |||||||    
T  33998292 tctctctaatgtagtcatttctaatcctatcacatctagtcttaccacacatccaacgcaacat 33998355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 62 - 184
Target Start/End: Original strand, 14389324 - 14389445
Alignment:
Q  62 ctctagtgatcagactatcctcaatttgatatactctctttcctacaaaatctataagtcttctctctacataatcaaaccacctaaacctattttccac 161  Q
    ||||||||||| |||||||||| || |||| || |||| || ||||||| |||||| |||||||||||||||   |||||||||| ||  |  |||||||    
T  14389324 ctctagtgatctgactatcctccatctgatctattctccttactacaaagtctataggtcttctctctacatgtccaaaccacct-aagtttgtttccac 14389422  T
Q  162 catcttttctactttaggtgcta 184  Q
    ||||||||||||  |||||||||    
T  14389423 catcttttctacgataggtgcta 14389445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 212 - 280
Target Start/End: Complemental strand, 31818518 - 31818449
Alignment:
Q  212 tcatttctaatcctatctcatctagtcttaccacacatccaatgcaacattctcatc-ccgctacactta 280  Q
    |||||||||||| ||||||||||| ||||| |||| ||||||||||||||||||||| | ||||||||||    
T  31818518 tcatttctaatcttatctcatctaatcttaacacatatccaatgcaacattctcatctctgctacactta 31818449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 61 - 180
Target Start/End: Complemental strand, 24665938 - 24665818
Alignment:
Q  61 cctctagtgatcagactatcctcaatttgatatactctctttcctacaaaa-tctataagtcttctctctacataatcaaaccacctaaacctattttcc 159  Q
    ||||| |||||| |||||| ||  || |||| ||||||| || |||||||| |||| | |||||||||||||||   |||||||||||| |||||||||     
T  24665938 cctctggtgatccgactatgcttcatctgatctactctccttactacaaaaatctacaggtcttctctctacatgtccaaaccacctaagcctattttct 24665839  T
Q  160 accatcttttctactttaggt 180  Q
    ||||| ||||||||| |||||    
T  24665838 accatattttctactataggt 24665818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 210 - 261
Target Start/End: Original strand, 7513283 - 7513334
Alignment:
Q  210 tgtcatttctaatcctatctcatctagtcttaccacacatccaatgcaacat 261  Q
    ||||||||| |||| ||||||||||||||||||||||||||||| |||||||    
T  7513283 tgtcatttcaaatcttatctcatctagtcttaccacacatccaacgcaacat 7513334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 59 - 180
Target Start/End: Original strand, 6293539 - 6293660
Alignment:
Q  59 ttcctctagtgatcagactatcctcaatttgatatactctctttcctacaaaatctataagtcttctctctacataatcaaaccacctaaacctattttc 158  Q
    |||||||||||||  |||||||||  || |||| ||||||| ||  |||| |||||| | || ||||||||||||   |||||||||| |||||| ||||    
T  6293539 ttcctctagtgatttgactatccttcatctgatttactctccttattacataatctacaggtgttctctctacatgcccaaaccacctgaacctagtttc 6293638  T
Q  159 caccatcttttctactttaggt 180  Q
    |||||| |||| |||| |||||    
T  6293639 caccatattttgtactataggt 6293660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 137 - 280
Target Start/End: Complemental strand, 9706827 - 9706687
Alignment:
Q  137 caaaccacctaaacctattttccaccatcttttctactttaggtgctatgctaccccaattttctctctaatt-tgtcatttctaatcctatctcatcta 235  Q
    ||||||| |||| ||||||||| |||| |||||||||  |||||||||     || | | | ||||||||||  ||||||| |||||||||||   ||||    
T  9706827 caaaccatctaagcctattttctaccaacttttctacaataggtgcta-----cctccactctctctctaatggtgtcattcctaatcctatcatgtcta 9706733  T
Q  236 gtcttaccacacatccaatgcaacattctcatc-ccgctacactta 280  Q
    |||||||||| |||||| |||||||| |||||| ||||||||||||    
T  9706732 gtcttaccactcatccagtgcaacatcctcatctccgctacactta 9706687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 104 - 172
Target Start/End: Original strand, 43250 - 43318
Alignment:
Q  104 ctacaaaatctataagtcttctctctacataatcaaaccacctaaacctattttccaccatcttttcta 172  Q
    ||||||||||||||| ||||||||||||||   || ||||||||| |||| |||||||||| |||||||    
T  43250 ctacaaaatctataaatcttctctctacatggccagaccacctaagcctagtttccaccattttttcta 43318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 280
Target Start/End: Complemental strand, 608141 - 608070
Alignment:
Q  210 tgtcatttctaatcctatctcatctagtcttaccacacatccaatgcaacattctcatc-ccgctacactta 280  Q
    ||||||| |||||||||||  ||||||||||||||| ||||||| | ||||| |||||| ||||||||||||    
T  608141 tgtcattcctaatcctatcctatctagtcttaccactcatccaacggaacatcctcatctccgctacactta 608070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 209 - 248
Target Start/End: Complemental strand, 8364559 - 8364520
Alignment:
Q  209 ttgtcatttctaatcctatctcatctagtcttaccacaca 248  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  8364559 ttgtcatttctaatcctatcccatctagtcttaccacaca 8364520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 119 - 280
Target Start/End: Original strand, 20427849 - 20428007
Alignment:
Q  119 gtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgctatgctaccccaattttctctctaatt-tgtcattt 217  Q
    ||||||||| ||||   |||||||| |||| ||||||||| |||| |||||||||| |||||||||     |||| | | ||||||||||  |||||||     
T  20427849 gtcttctctatacacgttcaaaccatctaagcctattttctaccaacttttctactataggtgcta-----cccccactctctctctaatggtgtcattc 20427943  T
Q  218 ctaatcctatctcatctagtcttaccacacatccaatgcaacattctcatc-ccgctacactta 280  Q
    |||||||||||   ||| ||| |||||| ||||||  ||||||| |||||| ||||||||||||    
T  20427944 ctaatcctatcctgtcttgtcctaccactcatccagcgcaacatcctcatctccgctacactta 20428007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 199 - 268
Target Start/End: Original strand, 5129125 - 5129195
Alignment:
Q  199 tctctctaat-ttgtcatttctaatcctatctcatctagtcttaccacacatccaatgcaacattctcatc 268  Q
    |||||||||| |||||||||||||||| ||| |||| | ||||||||||||| ||| ||||||| ||||||    
T  5129125 tctctctaatattgtcatttctaatccgatcacatcgaatcttaccacacattcaacgcaacatcctcatc 5129195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 88 - 182
Target Start/End: Original strand, 6907009 - 6907103
Alignment:
Q  88 tgatatactctctttcctacaaaatctataagtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgc 182  Q
    |||| ||||||| || |||||||||||| | ||||||||||||||||| ||||| || ||| |||| ||   ||||||| ||||||| |||||||    
T  6907009 tgatctactctccttactacaaaatctacatgtcttctctctacataaccaaactacgtaagcctagttctgaccatctattctactataggtgc 6907103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 220 - 262
Target Start/End: Original strand, 7150628 - 7150670
Alignment:
Q  220 aatcctatctcatctagtcttaccacacatccaatgcaacatt 262  Q
    ||||||||||| |||||||||||||||||||||| ||||||||    
T  7150628 aatcctatctcgtctagtcttaccacacatccaaagcaacatt 7150670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 61 - 146
Target Start/End: Complemental strand, 579545 - 579460
Alignment:
Q  61 cctctagtgatcagactatcctcaatttgatatactctctttcctacaaaatctataagtcttctctctacataatcaaaccacct 146  Q
    ||||||||||||||||||||||| || ||||  |||||| || ||| | |||||| ||| |||||||||||||  |||||| ||||    
T  579545 cctctagtgatcagactatcctccatctgatcaactctccttactatataatctacaagccttctctctacatgctcaaactacct 579460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 119 - 278
Target Start/End: Complemental strand, 30031325 - 30031169
Alignment:
Q  119 gtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgctatgctaccccaattttctctctaatt-tgtcattt 217  Q
    |||||||||||||||   |||  || |||| ||||||||| |||| |||||||||| |||||||||     |||| | |  |||||||||  || |||||    
T  30031325 gtcttctctctacatgtccaactcatctaagcctattttctaccaacttttctactataggtgcta-----cccccactccctctctaatggtgacattt 30031231  T
Q  218 ctaatcctatctcatctagtcttaccacacatccaatgcaacattctcatc-ccgctacact 278  Q
    ||||||||||| | |||||||||||||| |||||||  |||||  |||||| ||||||||||    
T  30031230 ctaatcctatcccgtctagtcttaccactcatccaacacaacaacctcatctccgctacact 30031169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 210 - 280
Target Start/End: Original strand, 10100157 - 10100228
Alignment:
Q  210 tgtcatttctaatcctatctcatctagtcttaccacacatccaatgcaacattctcatc-ccgctacactta 280  Q
    |||||||||||||| ||| |  |||||||||||||| |||| || ||||||| |||||| ||||||||||||    
T  10100157 tgtcatttctaatcatatattgtctagtcttaccactcatctaacgcaacatcctcatctccgctacactta 10100228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 111 - 181
Target Start/End: Complemental strand, 26291856 - 26291788
Alignment:
Q  111 atctataagtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtg 181  Q
    |||||||||||||||||||||||   ||||||||||||  |||||||| ||||| ||||||| | ||||||    
T  26291856 atctataagtcttctctctacat--gcaaaccacctaagtctattttctaccatattttctattataggtg 26291788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 280
Target Start/End: Original strand, 4948629 - 4948678
Alignment:
Q  232 tctagtcttaccacacatccaatgcaacattctcatc-ccgctacactta 280  Q
    |||||||||||||||||||||| ||||||| || ||| ||||||||||||    
T  4948629 tctagtcttaccacacatccaaagcaacatcctaatctccgctacactta 4948678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 280
Target Start/End: Original strand, 4955600 - 4955649
Alignment:
Q  232 tctagtcttaccacacatccaatgcaacattctcatc-ccgctacactta 280  Q
    |||||||||||||||||||||| ||||||| || ||| ||||||||||||    
T  4955600 tctagtcttaccacacatccaaagcaacatcctaatctccgctacactta 4955649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 174
Target Start/End: Complemental strand, 5897520 - 5897483
Alignment:
Q  137 caaaccacctaaacctattttccaccatcttttctact 174  Q
    |||||||| ||| |||||||||||||||||||||||||    
T  5897520 caaaccacttaagcctattttccaccatcttttctact 5897483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 258
Target Start/End: Original strand, 10617525 - 10617574
Alignment:
Q  209 ttgtcatttctaatcctatctcatctagtcttaccacacatccaatgcaa 258  Q
    |||||||||||||| |||| || |||||||||| ||||||||||| ||||    
T  10617525 ttgtcatttctaattctatttcgtctagtcttaacacacatccaacgcaa 10617574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 172
Target Start/End: Complemental strand, 18905974 - 18905894
Alignment:
Q  91 tatactctctttcctacaaaatctataagtcttctctctacataatcaaaccacctaaacctattttccaccatcttttcta 172  Q
    |||||||  ||| ||||||||||   |||| || |||||||||  |||||||||||||||| | ||||||||||||||||||    
T  18905974 tatactccttttactacaaaatcagcaagtattatctctacatgctcaaaccacctaaacc-aatttccaccatcttttcta 18905894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 171
Target Start/End: Original strand, 29020111 - 29020171
Alignment:
Q  110 aatctataagtcttctctctacataatcaaaccacctaaacctattttccaccatcttttct 171  Q
    ||||||||||||||||||| |||| ||||||||||| ||  | | |||||||||||||||||    
T  29020111 aatctataagtcttctctccacat-atcaaaccaccaaagtcgagtttccaccatcttttct 29020171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 209 - 261
Target Start/End: Complemental strand, 9568643 - 9568591
Alignment:
Q  209 ttgtcatttctaatcctatctcatctagtcttaccacacatccaatgcaacat 261  Q
    ||||||||| |||| |||||   |||||||||||||||||||||| |||||||    
T  9568643 ttgtcatttataattctatcatgtctagtcttaccacacatccaacgcaacat 9568591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 61 - 173
Target Start/End: Original strand, 9749379 - 9749491
Alignment:
Q  61 cctctagtgatcagactatcctcaatttgatatactctctttcctacaaaatctataagtcttctctctacataatcaaaccacctaaacctattttcca 160  Q
    |||||| ||||  ||||| ||||  |||||| ||||||  || ||| |||||||| | | |||||||||||||    |||||||||||||| | ||||||    
T  9749379 cctctaatgatttgactaccctctgtttgatctactcttcttactataaaatctacatgacttctctctacatccctaaaccacctaaaccaagtttcca 9749478  T
Q  161 ccatcttttctac 173  Q
    || ||||||||||    
T  9749479 ccttcttttctac 9749491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 65 - 133
Target Start/End: Original strand, 30718922 - 30718990
Alignment:
Q  65 tagtgatcagactatcctcaatttgatatactctctttcctacaaaatctataagtcttctctctacat 133  Q
    |||||||| ||||||| || |  ||||||||||||||| ||||||||| || | || ||||||||||||    
T  30718922 tagtgatctgactatcttccaactgatatactctctttactacaaaatttacatgtattctctctacat 30718990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 48; Significance: 2e-18; HSPs: 3)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 61 - 184
Target Start/End: Original strand, 44023 - 44146
Alignment:
Q  61 cctctagtgatcagactatcctcaatttgatatactctctttcctacaaaatctataagtcttctctctacataatcaaaccacctaaacctattttcca 160  Q
    |||||||||||| |||||||||| || |  | ||||||| || ||| | |||||  | |||||||||||||||   |||||||||||| ||||||||||     
T  44023 cctctagtgatctgactatcctccatctagtctactctccttactagagaatctgaaggtcttctctctacatgcccaaaccacctaagcctattttccg 44122  T
Q  161 ccatcttttctactttaggtgcta 184  Q
    |||||||||||||| |||||||||    
T  44123 ccatcttttctactataggtgcta 44146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 119 - 261
Target Start/End: Complemental strand, 31537 - 31399
Alignment:
Q  119 gtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgctatgctaccccaattttctctctaatt-tgtcattt 217  Q
    |||||||||||||||   ||||||| |||| ||||||||| |||| |||||||||| |||||||||     |||| | | ||||||||||  |||||||     
T  31537 gtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgcta-----cccccactctctctctaatggtgtcattc 31443  T
Q  218 ctaatcctatctcatctagtcttaccacacatccaatgcaacat 261  Q
    |||||| ||||   |||||||||||||| ||||||| |||||||    
T  31442 ctaatcttatcctgtctagtcttaccactcatccaacgcaacat 31399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 209 - 268
Target Start/End: Original strand, 44170 - 44229
Alignment:
Q  209 ttgtcatttctaatcctatctcatctagtcttaccacacatccaatgcaacattctcatc 268  Q
    ||||||||| |||| ||||  |||||||||||||| ||||||||| ||||||| ||||||    
T  44170 ttgtcatttttaatactataccatctagtcttaccgcacatccaacgcaacatcctcatc 44229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0570 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0570
Description:

Target: scaffold0570; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 119 - 184
Target Start/End: Original strand, 1161 - 1226
Alignment:
Q  119 gtcttctctctacataatcaaaccacctaaacctattttccaccatcttttctactttaggtgcta 184  Q
    |||||||||||||||   ||||||| |||| ||||||||| |||| |||||||||| |||||||||    
T  1161 gtcttctctctacatggccaaaccatctaagcctattttctaccaacttttctactataggtgcta 1226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 253
Target Start/End: Original strand, 25684 - 25788
Alignment:
Q  145 ctaaacctattttccaccatcttttctactttaggtgctatgctaccccaattttctctctaatt-tgtcatttctaatcctatctcatctagtcttacc 243  Q
    |||| ||||||||| |||| |||||||||| |||||||||     |||| | | ||||||||||  ||||||| |||||||||||   ||||||||||||    
T  25684 ctaagcctattttctaccaacttttctactataggtgcta-----cccccactctctctctaatggtgtcattcctaatcctatcatgtctagtcttacc 25778  T
Q  244 acacatccaa 253  Q
    || |||||||    
T  25779 actcatccaa 25788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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