View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19161_high_25 (Length: 247)
Name: NF19161_high_25
Description: NF19161
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19161_high_25 |
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Alignment Details
Target: chr3 (Bit Score: 181; Significance: 6e-98; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 181; E-Value: 6e-98
Query Start/End: Original strand, 44 - 232
Target Start/End: Original strand, 48718701 - 48718889
Alignment:
| Q |
44 |
aaatcttctcttttttcccataaagaaattgatcctttaaatttgacaacacatcaacatcaatgtttttagatttcgtttatatcgatagatagctcga |
143 |
Q |
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| T |
48718701 |
aaatcttctcttttttcccataaagaaattgatcctttaaatttgacaacacatcaacatcaatgtttttagatttcgtttatatcgatagatagcttga |
48718800 |
T |
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| Q |
144 |
aagatttcatagagtttactctttcttttcttttgagagtgatgattatctaacataaacaattttcgttgttgtagaaattgttttct |
232 |
Q |
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| T |
48718801 |
aagatttcatagagtttactctttcttttcttttgagagtgatgattatctaagataaacaattttcgttgttgtagaaattgttttct |
48718889 |
T |
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