View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19161_low_15 (Length: 347)
Name: NF19161_low_15
Description: NF19161
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19161_low_15 |
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Alignment Details
Target: chr7 (Bit Score: 265; Significance: 1e-148; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 26 - 334
Target Start/End: Original strand, 2599095 - 2599403
Alignment:
| Q |
26 |
agcacccgatacaacctcctgtaccacctttggagaaatagcaccttgtgacggtgtaaaaatcaggataacaaccctttgttgtatagaaataaccaca |
125 |
Q |
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||||| |||||||||||||||||||||||||||||||||| |||||| ||||| ||||||||||| |||||||||||||||| |||||||||||||||| |
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| T |
2599095 |
agcacacgatacaacctcctgtaccacctttggagaaataacaccttatgacgatgtaaaaatcactataacaaccctttgttttatagaaataaccaca |
2599194 |
T |
|
| Q |
126 |
tcgatcctaccagagcactaacatgctccaccaccttaagcatagccaacttctggatatttactaggatgttcctacttacaaggatatcatctgaacc |
225 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2599195 |
tcgatcctaccagagcactaacatgctccaccaccttaagcatagccaacttctggatatttactaggatgttcctacttacaaggatatcatctgaact |
2599294 |
T |
|
| Q |
226 |
aaatagacttctatgtctatcatgggtttggttacaataaaaaacattcatatatgcattgactcgtccctactaacagggaagtctcttaaaacagatt |
325 |
Q |
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||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
2599295 |
gaatagacttctatgtctatcacgggtttggttacaataaaaaacattcatatatgcattgactcgtccctactaacagggaagtctcttaaatcagatt |
2599394 |
T |
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| Q |
326 |
ggtctcttc |
334 |
Q |
| |
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||||||||| |
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| T |
2599395 |
ggtctcttc |
2599403 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 26 - 334
Target Start/End: Original strand, 2605798 - 2606099
Alignment:
| Q |
26 |
agcacccgatacaacctcctgtaccaccttt-ggagaaatagcaccttgtgacggtgtaaaaatcaggataacaaccctttgttgtatagaaataaccac |
124 |
Q |
| |
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||||| ||||||||||| |||||||||||| || ||||||| ||||| ||| ||| ||||| |||||||||||||||||||||||| || |||||| |
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| T |
2605798 |
agcacacgatacaaccttatgtaccaccttttggtgaaatagtaccttcaaacgatgtgaaaattaggataacaaccctttgttgtatatcaaaaaccac |
2605897 |
T |
|
| Q |
125 |
atcgatcctaccagagcactaacatgctccaccaccttaagcatagccaacttctggatatttactaggatgttcctacttacaaggatatcatctgaac |
224 |
Q |
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|| ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2605898 |
ctcaatcctaccatagcactaacatgctccacca---------tagccaacttctggatatttactaggatgttcctacttacaaggatatcatctgaac |
2605988 |
T |
|
| Q |
225 |
caaatagacttctatgtctatcatgggtttggttacaataa-aaaacattcatatatgcattgactcgtccctactaacagggaagtctcttaaaacaga |
323 |
Q |
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| ||||||||||||||||||||| ||||||||||||| ||| ||||||||||||| |||||||||| |||||||||| ||||||||| |||||| |||| |
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| T |
2605989 |
cgaatagacttctatgtctatcacgggtttggttacattaatcaaacattcatataggcattgactcatccctactaagagggaagtcacttaaatcaga |
2606088 |
T |
|
| Q |
324 |
ttggtctcttc |
334 |
Q |
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||||||||||| |
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|
| T |
2606089 |
ttggtctcttc |
2606099 |
T |
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