View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19161_low_34 (Length: 214)
Name: NF19161_low_34
Description: NF19161
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19161_low_34 |
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Alignment Details
Target: chr4 (Bit Score: 193; Significance: 1e-105; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 197
Target Start/End: Complemental strand, 32775527 - 32775331
Alignment:
| Q |
1 |
taaagaaagaagcaggtgctgctactcaattactctgccaaacattacagtttctataatctggaataatatactctccttaactggaaaatgaagacac |
100 |
Q |
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| T |
32775527 |
taaaggaagaagcaggtgctgctactcaattactctgccaaacattacagtttctataatctggaataatatactctccttaactggaaaatgaagacac |
32775428 |
T |
|
| Q |
101 |
aagtcagcgtagtaggagagccttcttaaagtaatattgttgcaagtgtacctactcatccaataaaatgaaagtacagaaaattgattaatatttc |
197 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32775427 |
aagtcagcgtagtaggagagccttcttaaagtaatattgttgcaagtgtacctactcatccaataaaatgaaagtacagaaaattgattaatatttc |
32775331 |
T |
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