View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19163_high_30 (Length: 308)
Name: NF19163_high_30
Description: NF19163
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19163_high_30 |
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Alignment Details
Target: chr7 (Bit Score: 268; Significance: 1e-149; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 1 - 268
Target Start/End: Complemental strand, 35056351 - 35056084
Alignment:
| Q |
1 |
aaacttgaagataatccaacaaattttcactctcggtatctctcagcggtacagccatcctcacaagcttaaaatcttcaccggcgtattcaagcgagta |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35056351 |
aaacttgaagataatccaacaaattttcactctcggtatctctcagcggtacagccatcctcacaagcttaaaatcttcaccggcgtattcaagcgagta |
35056252 |
T |
|
| Q |
101 |
gagaagtttatccggggagagagcggacttggcggcggtagggacgtcggagacatggagtttggaaatctccttgacagagacggagaaggaagaacgc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35056251 |
gagaagtttatccggggagagagcggacttggcggcggtagggacgtcggagacatggagtttggaaatctccttgacagagacggagaaggaagaacgc |
35056152 |
T |
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| Q |
201 |
cattcggagaagaaggagatggaagcggagctgagaacggagaggatgtgggtgatgttgtgggggac |
268 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35056151 |
cattcggagaagaaggagatggaagcggagctgagaacggagaggatgtgggtgatgttgtgggggac |
35056084 |
T |
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