View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19163_high_36 (Length: 273)

Name: NF19163_high_36
Description: NF19163
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19163_high_36
NF19163_high_36
[»] chr7 (47 HSPs)
chr7 (1-257)||(33673053-33673309)
chr7 (4-174)||(19302484-19302650)
chr7 (14-160)||(420349-420495)
chr7 (12-113)||(5947172-5947273)
chr7 (17-99)||(12110352-12110434)
chr7 (4-181)||(17944257-17944434)
chr7 (4-182)||(39907782-39907958)
chr7 (27-180)||(33128755-33128906)
chr7 (4-77)||(46280290-46280363)
chr7 (4-80)||(20526425-20526501)
chr7 (25-183)||(36517579-36517735)
chr7 (24-111)||(25130073-25130160)
chr7 (63-169)||(25670512-25670618)
chr7 (27-128)||(38499879-38499981)
chr7 (18-72)||(47177629-47177683)
chr7 (5-161)||(27863659-27863815)
chr7 (14-174)||(34744017-34744177)
chr7 (14-79)||(44821948-44822013)
chr7 (129-187)||(18962491-18962549)
chr7 (21-102)||(20526921-20527003)
chr7 (116-174)||(33266407-33266464)
chr7 (14-79)||(33678769-33678834)
chr7 (4-85)||(40688996-40689077)
chr7 (14-180)||(45593516-45593684)
chr7 (31-79)||(7244686-7244734)
chr7 (134-174)||(11619079-11619119)
chr7 (22-101)||(6552286-6552365)
chr7 (17-80)||(30535555-30535618)
chr7 (4-71)||(43694594-43694661)
chr7 (18-77)||(45790443-45790502)
chr7 (4-182)||(48470023-48470201)
chr7 (136-174)||(1418530-1418568)
chr7 (23-156)||(19022524-19022657)
chr7 (25-99)||(19719007-19719080)
chr7 (4-86)||(22283753-22283835)
chr7 (4-161)||(33601344-33601500)
chr7 (133-183)||(39771869-39771919)
chr7 (137-174)||(9210933-9210970)
chr7 (18-99)||(46281136-46281217)
chr7 (24-101)||(47559595-47559672)
chr7 (22-102)||(9038109-9038188)
chr7 (26-82)||(12792576-12792632)
chr7 (138-174)||(24975989-24976025)
chr7 (136-180)||(30748949-30748993)
chr7 (14-74)||(40252128-40252188)
chr7 (25-77)||(43648240-43648292)
chr7 (138-174)||(47046029-47046065)
[»] chr5 (68 HSPs)
chr5 (5-183)||(34736439-34736617)
chr5 (18-172)||(9202671-9202825)
chr5 (23-102)||(32703269-32703348)
chr5 (21-170)||(7984965-7985114)
chr5 (4-174)||(16937804-16937974)
chr5 (4-102)||(39105443-39105542)
chr5 (17-102)||(6587100-6587185)
chr5 (18-99)||(7674641-7674722)
chr5 (26-85)||(4014434-4014493)
chr5 (4-79)||(12425550-12425625)
chr5 (19-174)||(36796628-36796782)
chr5 (18-76)||(7319399-7319457)
chr5 (17-79)||(10272447-10272509)
chr5 (32-181)||(10639960-10640109)
chr5 (4-161)||(15246812-15246969)
chr5 (14-80)||(36318763-36318829)
chr5 (21-174)||(41534437-41534587)
chr5 (17-102)||(1619082-1619166)
chr5 (14-102)||(23994708-23994797)
chr5 (14-99)||(25461312-25461397)
chr5 (5-181)||(40426745-40426921)
chr5 (20-85)||(42582907-42582972)
chr5 (14-105)||(25461080-25461172)
chr5 (27-174)||(39594809-39594956)
chr5 (20-80)||(42569753-42569813)
chr5 (20-174)||(41419315-41419468)
chr5 (16-74)||(12494820-12494878)
chr5 (9-174)||(12857259-12857424)
chr5 (23-77)||(29925839-29925893)
chr5 (39-183)||(3932588-3932732)
chr5 (25-98)||(11707055-11707128)
chr5 (25-86)||(32197720-32197781)
chr5 (14-79)||(36326000-36326065)
chr5 (51-174)||(499652-499775)
chr5 (39-182)||(7705911-7706054)
chr5 (58-174)||(14331400-14331515)
chr5 (25-85)||(34160731-34160791)
chr5 (13-56)||(4620181-4620224)
chr5 (40-174)||(9107105-9107239)
chr5 (26-101)||(17258877-17258952)
chr5 (25-79)||(7319024-7319078)
chr5 (39-77)||(12857723-12857761)
chr5 (89-174)||(14932362-14932445)
chr5 (131-161)||(15015949-15015979)
chr5 (17-83)||(28776985-28777051)
chr5 (140-182)||(35299880-35299922)
chr5 (25-182)||(40438867-40439023)
chr5 (20-102)||(41957444-41957526)
chr5 (17-102)||(2568650-2568735)
chr5 (4-101)||(5559704-5559801)
chr5 (58-99)||(12467166-12467207)
chr5 (21-102)||(14674893-14674974)
chr5 (14-99)||(17368665-17368750)
chr5 (21-85)||(29845444-29845509)
chr5 (15-174)||(32009682-32009842)
chr5 (18-99)||(32194075-32194156)
chr5 (26-95)||(42583150-42583219)
chr5 (14-54)||(443924-443964)
chr5 (14-102)||(3977297-3977385)
chr5 (26-102)||(6096546-6096625)
chr5 (18-102)||(14295499-14295583)
chr5 (138-174)||(14706205-14706241)
chr5 (138-174)||(17369316-17369352)
chr5 (137-173)||(22209746-22209782)
chr5 (14-77)||(32372613-32372677)
chr5 (18-66)||(32942611-32942659)
chr5 (14-98)||(41016566-41016650)
chr5 (39-71)||(42569475-42569507)
[»] chr4 (60 HSPs)
chr4 (18-180)||(17822780-17822942)
chr4 (14-181)||(21731570-21731737)
chr4 (39-179)||(29388628-29388768)
chr4 (18-79)||(51630104-51630165)
chr4 (4-180)||(53294029-53294205)
chr4 (39-174)||(2244065-2244200)
chr4 (39-181)||(25904137-25904279)
chr4 (25-179)||(54426043-54426197)
chr4 (4-102)||(55302228-55302327)
chr4 (14-96)||(7694009-7694091)
chr4 (25-174)||(52315118-52315267)
chr4 (18-174)||(24169256-24169412)
chr4 (4-102)||(1407935-1408035)
chr4 (4-84)||(3155582-3155662)
chr4 (21-85)||(40174559-40174623)
chr4 (50-161)||(49939885-49939996)
chr4 (17-84)||(1203127-1203194)
chr4 (14-77)||(16199999-16200062)
chr4 (4-79)||(17884047-17884122)
chr4 (131-174)||(27043751-27043794)
chr4 (14-93)||(35064844-35064923)
chr4 (17-183)||(35571543-35571709)
chr4 (131-182)||(42403936-42403987)
chr4 (4-91)||(50681093-50681180)
chr4 (39-180)||(26780-26920)
chr4 (33-99)||(825486-825552)
chr4 (19-85)||(6364143-6364209)
chr4 (41-174)||(13126497-13126630)
chr4 (136-174)||(32831439-32831477)
chr4 (41-102)||(38515849-38515908)
chr4 (40-97)||(10205908-10205965)
chr4 (17-102)||(30066759-30066844)
chr4 (19-127)||(45214365-45214473)
chr4 (18-99)||(50800026-50800106)
chr4 (14-102)||(55414412-55414501)
chr4 (14-84)||(679244-679311)
chr4 (4-68)||(23503538-23503602)
chr4 (15-91)||(50662742-50662818)
chr4 (131-174)||(8705047-8705090)
chr4 (131-174)||(15173224-15173267)
chr4 (14-77)||(19395134-19395197)
chr4 (18-85)||(28749917-28749984)
chr4 (16-99)||(42121479-42121561)
chr4 (131-182)||(44797986-44798037)
chr4 (25-88)||(47800623-47800686)
chr4 (4-74)||(437265-437335)
chr4 (137-183)||(25571371-25571417)
chr4 (18-68)||(32421098-32421148)
chr4 (4-102)||(52746833-52746931)
chr4 (27-72)||(942131-942176)
chr4 (18-79)||(16494821-16494882)
chr4 (20-77)||(20031744-20031801)
chr4 (136-181)||(22662165-22662210)
chr4 (136-181)||(22666644-22666689)
chr4 (21-82)||(29601021-29601082)
chr4 (18-174)||(23459621-23459776)
chr4 (33-77)||(29912956-29913000)
chr4 (18-102)||(30207564-30207648)
chr4 (17-61)||(49940025-49940069)
chr4 (29-81)||(50004158-50004210)
[»] chr1 (69 HSPs)
chr1 (25-174)||(6292493-6292641)
chr1 (14-126)||(34290225-34290337)
chr1 (4-83)||(7472290-7472369)
chr1 (14-85)||(45975679-45975750)
chr1 (4-99)||(10809324-10809419)
chr1 (14-100)||(7136993-7137079)
chr1 (17-182)||(10199321-10199486)
chr1 (14-98)||(10799451-10799535)
chr1 (4-98)||(4576784-4576878)
chr1 (16-101)||(27820330-27820416)
chr1 (19-96)||(37842354-37842431)
chr1 (14-174)||(2777881-2778040)
chr1 (4-99)||(24915046-24915142)
chr1 (14-102)||(43332473-43332561)
chr1 (4-174)||(3233936-3234106)
chr1 (24-102)||(6102153-6102232)
chr1 (4-102)||(17603376-17603475)
chr1 (18-161)||(31517674-31517817)
chr1 (14-101)||(41195187-41195274)
chr1 (24-102)||(10744300-10744378)
chr1 (18-99)||(4622086-4622167)
chr1 (18-79)||(14629982-14630043)
chr1 (14-102)||(42174844-42174933)
chr1 (17-85)||(17778949-17779017)
chr1 (17-77)||(51695513-51695573)
chr1 (25-100)||(5886989-5887064)
chr1 (39-180)||(2295110-2295251)
chr1 (32-102)||(35925697-35925767)
chr1 (4-85)||(2294890-2294971)
chr1 (19-80)||(32113652-32113713)
chr1 (20-85)||(35179134-35179199)
chr1 (4-98)||(27970290-27970386)
chr1 (18-85)||(6231826-6231893)
chr1 (140-183)||(24460313-24460356)
chr1 (18-101)||(27887112-27887195)
chr1 (38-168)||(37593611-37593741)
chr1 (18-101)||(40943221-40943303)
chr1 (41-79)||(1232921-1232959)
chr1 (4-102)||(1565528-1565626)
chr1 (116-182)||(2295283-2295348)
chr1 (18-80)||(7218089-7218151)
chr1 (25-79)||(14443449-14443503)
chr1 (117-187)||(15784410-15784479)
chr1 (63-184)||(27976642-27976760)
chr1 (14-76)||(39596586-39596648)
chr1 (137-183)||(41505786-41505832)
chr1 (136-174)||(51929383-51929421)
chr1 (19-80)||(5090856-5090917)
chr1 (26-174)||(5741607-5741755)
chr1 (4-85)||(9656629-9656710)
chr1 (14-99)||(12287188-12287273)
chr1 (14-79)||(15558206-15558271)
chr1 (18-99)||(28482229-28482310)
chr1 (53-102)||(30815646-30815695)
chr1 (40-77)||(37631577-37631614)
chr1 (4-77)||(38018382-38018455)
chr1 (4-77)||(47432075-47432147)
chr1 (14-102)||(49938736-49938825)
chr1 (32-99)||(3070086-3070154)
chr1 (39-174)||(5720939-5721074)
chr1 (18-98)||(18420851-18420931)
chr1 (138-174)||(29793619-29793655)
chr1 (18-98)||(30257676-30257756)
chr1 (131-175)||(38115997-38116041)
chr1 (4-79)||(38578506-38578582)
chr1 (39-79)||(43722344-43722384)
chr1 (66-102)||(45999281-45999317)
chr1 (17-77)||(49888759-49888819)
chr1 (27-102)||(51929531-51929607)
[»] chr2 (64 HSPs)
chr2 (17-102)||(680495-680580)
chr2 (18-156)||(18066121-18066259)
chr2 (14-174)||(33319737-33319893)
chr2 (4-161)||(1625879-1626036)
chr2 (38-182)||(4606938-4607082)
chr2 (18-174)||(20952348-20952504)
chr2 (14-85)||(29628753-29628824)
chr2 (26-85)||(40279268-40279327)
chr2 (26-85)||(40279338-40279397)
chr2 (26-85)||(40279408-40279467)
chr2 (86-180)||(42419855-42419948)
chr2 (131-184)||(10619131-10619184)
chr2 (4-77)||(12464491-12464564)
chr2 (14-106)||(33931559-33931651)
chr2 (4-99)||(41851514-41851610)
chr2 (136-183)||(26372639-26372686)
chr2 (19-102)||(29316768-29316851)
chr2 (86-173)||(31561664-31561750)
chr2 (17-101)||(750663-750747)
chr2 (8-80)||(2142636-2142709)
chr2 (31-99)||(3611232-3611301)
chr2 (49-102)||(5902542-5902595)
chr2 (43-182)||(7928211-7928351)
chr2 (24-180)||(9174814-9174970)
chr2 (131-188)||(15305780-15305837)
chr2 (17-174)||(40158710-40158867)
chr2 (18-79)||(42621391-42621452)
chr2 (136-180)||(15370238-15370282)
chr2 (131-183)||(30331857-30331909)
chr2 (23-102)||(43279521-43279601)
chr2 (136-183)||(1830150-1830197)
chr2 (131-174)||(18179055-18179098)
chr2 (18-77)||(18179258-18179317)
chr2 (39-181)||(36534782-36534924)
chr2 (26-80)||(16398115-16398169)
chr2 (27-85)||(19826266-19826324)
chr2 (136-174)||(22878209-22878247)
chr2 (27-77)||(26143658-26143708)
chr2 (137-179)||(27317491-27317533)
chr2 (64-174)||(28677580-28677690)
chr2 (14-183)||(44438753-44438920)
chr2 (14-55)||(579477-579518)
chr2 (4-101)||(1810644-1810740)
chr2 (4-77)||(1893299-1893371)
chr2 (49-102)||(5902605-5902658)
chr2 (40-101)||(12464679-12464740)
chr2 (32-85)||(15977992-15978045)
chr2 (119-172)||(17775389-17775442)
chr2 (23-99)||(26202026-26202103)
chr2 (14-91)||(32592575-32592652)
chr2 (20-72)||(6167306-6167358)
chr2 (18-86)||(11513891-11513959)
chr2 (22-86)||(13736302-13736366)
chr2 (23-95)||(19333325-19333397)
chr2 (18-58)||(25800822-25800862)
chr2 (136-180)||(28803445-28803489)
chr2 (18-102)||(33256733-33256817)
chr2 (66-106)||(33503048-33503088)
chr2 (138-174)||(40059382-40059418)
chr2 (138-174)||(40085282-40085318)
chr2 (136-180)||(40759271-40759315)
chr2 (138-174)||(40837358-40837394)
chr2 (42-161)||(43036574-43036692)
chr2 (32-99)||(45229518-45229586)
[»] chr3 (57 HSPs)
chr3 (4-174)||(20880455-20880625)
chr3 (4-166)||(34610735-34610897)
chr3 (15-174)||(36507013-36507171)
chr3 (14-80)||(50600193-50600259)
chr3 (14-99)||(1816572-1816657)
chr3 (17-102)||(39602203-39602288)
chr3 (14-161)||(30443882-30444029)
chr3 (4-174)||(21367646-21367816)
chr3 (6-96)||(40665410-40665500)
chr3 (4-77)||(35959474-35959547)
chr3 (30-98)||(3845559-3845627)
chr3 (32-170)||(9832680-9832818)
chr3 (4-75)||(46886712-46886783)
chr3 (4-180)||(402457-402633)
chr3 (14-79)||(2719457-2719522)
chr3 (18-102)||(46030983-46031068)
chr3 (16-76)||(44747427-44747487)
chr3 (39-122)||(23808037-23808120)
chr3 (14-85)||(28622009-28622080)
chr3 (18-85)||(36783344-36783411)
chr3 (4-174)||(37795575-37795744)
chr3 (4-179)||(45541550-45541725)
chr3 (14-175)||(18405751-18405912)
chr3 (132-174)||(26990146-26990188)
chr3 (18-99)||(33405162-33405244)
chr3 (26-96)||(41633361-41633431)
chr3 (23-183)||(39980727-39980887)
chr3 (4-77)||(47132310-47132383)
chr3 (28-85)||(48528559-48528616)
chr3 (131-183)||(16072953-16073005)
chr3 (25-97)||(20669172-20669244)
chr3 (14-102)||(54837027-54837115)
chr3 (14-61)||(12862282-12862329)
chr3 (18-97)||(14548719-14548798)
chr3 (136-183)||(20173802-20173849)
chr3 (18-85)||(22343601-22343668)
chr3 (131-174)||(25447166-25447209)
chr3 (14-97)||(33883748-33883831)
chr3 (4-102)||(36631043-36631142)
chr3 (25-76)||(38665308-38665359)
chr3 (1-47)||(25447292-25447338)
chr3 (52-102)||(30923891-30923941)
chr3 (17-102)||(53789453-53789539)
chr3 (18-99)||(2201121-2201202)
chr3 (4-102)||(4401026-4401122)
chr3 (4-85)||(26878096-26878177)
chr3 (137-174)||(26911703-26911740)
chr3 (56-172)||(31365111-31365227)
chr3 (132-173)||(33405114-33405155)
chr3 (17-102)||(36139870-36139955)
chr3 (53-130)||(47132022-47132099)
chr3 (39-122)||(901938-902022)
chr3 (148-188)||(2100086-2100126)
chr3 (136-180)||(22667514-22667558)
chr3 (136-180)||(22724153-22724197)
chr3 (18-82)||(24887296-24887360)
chr3 (137-177)||(46407618-46407658)
[»] chr8 (54 HSPs)
chr8 (15-182)||(30251367-30251534)
chr8 (17-80)||(10114481-10114544)
chr8 (4-102)||(10120735-10120834)
chr8 (16-102)||(27028822-27028909)
chr8 (14-183)||(43717846-43718018)
chr8 (18-79)||(28769355-28769416)
chr8 (4-101)||(37353243-37353340)
chr8 (6-102)||(6509296-6509392)
chr8 (18-174)||(11376696-11376852)
chr8 (26-113)||(31716208-31716296)
chr8 (25-154)||(1930035-1930164)
chr8 (1-158)||(26771241-26771398)
chr8 (32-181)||(35534527-35534676)
chr8 (131-181)||(38602433-38602483)
chr8 (14-79)||(8062318-8062383)
chr8 (14-85)||(2482854-2482923)
chr8 (22-98)||(7514810-7514885)
chr8 (6-128)||(29168023-29168146)
chr8 (14-61)||(32841342-32841389)
chr8 (14-85)||(33714246-33714317)
chr8 (21-88)||(43504747-43504814)
chr8 (14-80)||(38602322-38602388)
chr8 (24-98)||(41442450-41442524)
chr8 (26-99)||(14905613-14905686)
chr8 (14-106)||(18133645-18133738)
chr8 (7-80)||(27049349-27049421)
chr8 (18-79)||(33912126-33912187)
chr8 (49-161)||(1058011-1058122)
chr8 (18-78)||(9956831-9956891)
chr8 (58-102)||(13459678-13459722)
chr8 (39-79)||(31916618-31916658)
chr8 (39-181)||(3536859-3537001)
chr8 (4-55)||(24558832-24558883)
chr8 (18-101)||(30389092-30389175)
chr8 (18-85)||(31705078-31705145)
chr8 (136-174)||(4560613-4560651)
chr8 (18-100)||(11795085-11795167)
chr8 (4-70)||(15180520-15180586)
chr8 (18-84)||(30013211-30013277)
chr8 (13-51)||(31891879-31891917)
chr8 (8-98)||(34849086-34849176)
chr8 (31-77)||(44236841-44236887)
chr8 (58-99)||(3161619-3161660)
chr8 (135-176)||(11183653-11183694)
chr8 (25-102)||(11569450-11569527)
chr8 (39-100)||(20672764-20672825)
chr8 (15-80)||(36338277-36338342)
chr8 (138-174)||(2606162-2606198)
chr8 (66-102)||(7878519-7878555)
chr8 (24-128)||(27754403-27754507)
chr8 (17-85)||(31862485-31862553)
chr8 (18-82)||(31884587-31884650)
chr8 (44-183)||(35643900-35644039)
chr8 (14-102)||(42215299-42215387)
[»] chr6 (35 HSPs)
chr6 (20-102)||(31624085-31624167)
chr6 (4-100)||(2735048-2735145)
chr6 (14-149)||(20368127-20368261)
chr6 (4-101)||(9093549-9093647)
chr6 (14-102)||(34430453-34430542)
chr6 (14-91)||(6536604-6536681)
chr6 (23-79)||(835265-835321)
chr6 (4-56)||(11784069-11784121)
chr6 (14-106)||(14926779-14926871)
chr6 (16-174)||(24982696-24982854)
chr6 (17-99)||(10616709-10616790)
chr6 (4-97)||(415283-415376)
chr6 (25-161)||(2455259-2455395)
chr6 (18-102)||(2027399-2027483)
chr6 (131-183)||(21405066-21405118)
chr6 (40-80)||(31624956-31624996)
chr6 (18-85)||(4246403-4246470)
chr6 (4-75)||(6909892-6909963)
chr6 (6-53)||(9604830-9604877)
chr6 (44-102)||(9912183-9912242)
chr6 (131-182)||(35069525-35069576)
chr6 (18-96)||(8364975-8365053)
chr6 (17-102)||(283087-283172)
chr6 (20-77)||(837234-837291)
chr6 (18-99)||(1402989-1403070)
chr6 (14-79)||(9109267-9109332)
chr6 (18-59)||(10016538-10016579)
chr6 (136-181)||(12111078-12111123)
chr6 (35-155)||(31813171-31813291)
chr6 (18-59)||(33074993-33075034)
chr6 (25-101)||(6647387-6647463)
chr6 (13-77)||(19800454-19800518)
chr6 (39-79)||(29754115-29754155)
chr6 (137-181)||(30536879-30536923)
chr6 (38-102)||(34939757-34939821)
[»] scaffold0221 (1 HSPs)
scaffold0221 (4-102)||(22210-22309)
[»] scaffold0024 (1 HSPs)
scaffold0024 (25-85)||(21296-21355)
[»] scaffold0018 (1 HSPs)
scaffold0018 (4-78)||(178342-178416)


Alignment Details
Target: chr7 (Bit Score: 253; Significance: 1e-141; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 253; E-Value: 1e-141
Query Start/End: Original strand, 1 - 257
Target Start/End: Original strand, 33673053 - 33673309
Alignment:
Q  1 aacttaaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagc 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  33673053 aacttaaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaacaagctgaaaacagtttataaaaatgtcataagc 33673152  T
Q  101 tgatttaaaaagtgttcccaaatagtcttaacaaagcttatgtcagtagataagctcaaatgagtcaatccaaaaaggccctaggtccacatctggatag 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33673153 tgatttaaaaagtgttcccaaatagtcttaacaaagcttatgtcagtagataagctcaaatgagtcaatccaaaaaggccctaggtccacatctggatag 33673252  T
Q  201 aatgtgcacgcgaatacttattagctagaggtaaaatacttttgaaaatgtgcattt 257  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33673253 aatgtgcacgcgaatacttattagctagaggtaaaatacttttgaaaatgtgcattt 33673309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 4 - 174
Target Start/End: Complemental strand, 19302650 - 19302484
Alignment:
Q  4 ttaaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaat-gtcataagctg 102  Q
    ||||||| | |||||||| | |||||| |||||  ||||||||||    |||| |||| |||||||| |||||| ||||||| ||||| |||||||||||    
T  19302650 ttaaattgtttttgtatatgttataagttgtttttataagctata----agaacttatgaaaataagttgaaaaaagtttatgaaaattgtcataagctg 19302555  T
Q  103 atttaaaaagtgttcccaaatagtcttaacaaagcttatgtcagtagataagctcaaatgagtcaatccaaa 174  Q
     ||| | || |  ||||||||| ||| | |||| ||||||||||||||||||||||||| ||||||| ||||    
T  19302554 ttttcataaattctcccaaatattctca-caaaacttatgtcagtagataagctcaaataagtcaattcaaa 19302484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 14 - 160
Target Start/End: Original strand, 420349 - 420495
Alignment:
Q  14 tttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacag-tttataaaaatgtcataagctgatttaaaaag 112  Q
    |||||||| |||||||| ||||||| ||||||||||||||||| |||| |||||||| ||||||  | |||| |||| ||||||||  || ||| | |||    
T  420349 tttgtatatgctataagttgtttccgtaagctatattggagaacttatgaaaataagttgaaaaaggctttagaaaactgtcataaattgttttcataag 420448  T
Q  113 tgttcccaaatagtcttaacaaagcttatgtcagtagataagctcaaa 160  Q
    |  ||||||| |||| | |||||||||| | ||||||| |||||||||    
T  420449 ttctcccaaacagtc-tcacaaagcttaagccagtagacaagctcaaa 420495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 12 - 113
Target Start/End: Original strand, 5947172 - 5947273
Alignment:
Q  12 tatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataagctgatttaaaa 110  Q
    ||||||||||| ||||||||||| | |||||||||| | |||||| |||| ||||||||||||||| || |||| ||||||| ||||||||| ||| |||    
T  5947172 tatttgtataa-ctataagctgtattcataagctatctaggagaagttatgaaaataagctgaaaagagcttatgaaaaatgccataagctggtttcaaa 5947270  T
Q  111 agt 113  Q
    |||    
T  5947271 agt 5947273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 99
Target Start/End: Original strand, 12110352 - 12110434
Alignment:
Q  17 gtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataag 99  Q
    |||||||||||||||||||| |||||||||| ||| |||| |||| ||||||| || |||||||||| | || ||||||||||    
T  12110352 gtataagctataagctgttttcataagctatcttgaagaacttatgaaaataatctaaaaacagtttgtgaacatgtcataag 12110434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 181
Target Start/End: Complemental strand, 17944434 - 17944257
Alignment:
Q  4 ttaaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataagctg 102  Q
    ||||||| | |||||||| | | |||| ||||| |||||| ||| ||||| ||||||| ||| ||||||||||| ||  ||| |||| ||||||||||||    
T  17944434 ttaaattgtttttgtatatgttgtaagttgttttcataagttatcttggataatttatgaaattaagctgaaaaaagcatatgaaaagtgtcataagctg 17944335  T
Q  103 atttaaaaagtgttcccaaatagtcttaacaaagcttatgtcagtagataagctcaaatgagtcaatccaaaaaggccc 181  Q
     ||| | ||||  ||  ||| |||| | |||||||||||| ||||||||||||| |||| ||||| |||||| ||||||    
T  17944334 tttttataagttgtctgaaacagtc-tcacaaagcttatgccagtagataagcttaaataagtcactccaaacaggccc 17944257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 182
Target Start/End: Original strand, 39907782 - 39907958
Alignment:
Q  4 ttaaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagctga 103  Q
    ||||||| | |||||||||||||||| |||||| ||||| |||| || ||||| | || |||||||||||||||||| | || || ||| |||||||| |    
T  39907782 ttaaattgtttttgtataagctataaactgttttcataaactatcttagagaactaatgaaaataagctgaaaacagctaatgaacatg-cataagctca 39907880  T
Q  104 tttaaaaagtgttcccaaatagtcttaacaaagcttatgtcagtagataagctcaaatgagtcaatccaaaaaggccct 182  Q
    ||| | ||||  || |||| |||| | ||||| |||||  | ||| ||||||||||||||  ||||||||| |||||||    
T  39907881 ttttacaagttctctcaaacagtc-tcacaaaacttatccctgtatataagctcaaatgaaccaatccaaacaggccct 39907958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 27 - 180
Target Start/End: Original strand, 33128755 - 33128906
Alignment:
Q  27 taagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagctgatttaaaaagtgttcccaaatagt 126  Q
    |||||||||| ||||| ||||||||||||| || | |||||||||| |||| || |||||||| |||||| ||| | ||| | || | |||||||| | |    
T  33128755 taagctgtttacataaactatattggagaacttgtgaaaataagctaaaaaaagcttataaaattgtcatcagcagttttcataact-ttcccaaacaat 33128853  T
Q  127 cttaacaaagcttatgtcagtagataagctcaaatgagtcaatccaaaaaggcc 180  Q
    ||| ||||| |||| || || | |||||||||||| |||||||||||| |||||    
T  33128854 ctt-acaaaacttaagttagcatataagctcaaataagtcaatccaaacaggcc 33128906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 4 - 77
Target Start/End: Complemental strand, 46280363 - 46280290
Alignment:
Q  4 ttaaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaa 77  Q
    ||||||| | |||||||| ||||||||||||||  |||||||||||||||||| |||| |||||| ||||||||    
T  46280363 ttaaattgtttttgtatatgctataagctgtttttataagctatattggagaacttatgaaaataggctgaaaa 46280290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 4 - 80
Target Start/End: Original strand, 20526425 - 20526501
Alignment:
Q  4 ttaaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacag 80  Q
    ||||||||| |||||| | |||||||||||||| |||||||||| |||||||| | || |||||||||| |||||||    
T  20526425 ttaaattatgtttgtacatgctataagctgttttcataagctattttggagaactaatgaaaataagctaaaaacag 20526501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 25 - 183
Target Start/End: Original strand, 36517579 - 36517735
Alignment:
Q  25 tataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaa-aatgtcataagctgatttaaaaagtgttcccaaat 123  Q
    ||||| || ||| |||||||||| |||||||| |||| ||||||| ||||||| || |||| || |||||||  ||||| ||||| ||||  |||||||     
T  36517579 tataaactattttcataagctatcttggagaaattatgaaaataaactgaaaatagcttatgaacaatgtca--agctgttttaataagttctcccaaac 36517676  T
Q  124 agtcttaacaaagcttatgtcagtagataagctcaaatgagtcaatccaaaaaggcccta 183  Q
    |||||||  ||| |||||| |||||| ||||||||||| | | |||||||| ||||||||    
T  36517677 agtcttagaaaa-cttatgccagtagctaagctcaaataaatgaatccaaacaggcccta 36517735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 24 - 111
Target Start/End: Complemental strand, 25130160 - 25130073
Alignment:
Q  24 ctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagctgatttaaaaa 111  Q
    ||||||||||||| || ||||||| ||||| ||||| | |||||| ||||||||||| |||| || ||||||||| ||| ||||||||    
T  25130160 ctataagctgttttcaaaagctatcttggaaaatttctgaaaatatgctgaaaacagcttatgaacatgtcataaactgttttaaaaa 25130073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 63 - 169
Target Start/End: Complemental strand, 25670618 - 25670512
Alignment:
Q  63 aaaataagctgaaaacagtttataaaaatgtcataagctgatttaaaaagtgttcccaaatagtcttaacaaagcttatgtcagtagataagctcaaatg 162  Q
    ||||||||||||||||| ||||| || |||||||||| || ||| | |||| ||| |||| ||||| |  | ||||||||||| ||||||||||||| |     
T  25670618 aaaataagctgaaaacaatttattaacatgtcataagttgttttcataagttttctcaaacagtctcacaagagcttatgtcaatagataagctcaagta 25670519  T
Q  163 agtcaat 169  Q
    |||||||    
T  25670518 agtcaat 25670512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 27 - 128
Target Start/End: Complemental strand, 38499981 - 38499879
Alignment:
Q  27 taagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataagctgatttaaaaagtgttcccaaatag 125  Q
    |||||||| | ||||||| || |||||||| |||| ||||||||||| ||| || |||| ||||||||||||||||| ||| ||||||  ||||||| ||    
T  38499981 taagctgtcttcataagcaatcttggagaacttatgaaaataagctggaaaaagcttatgaaaaatgtcataagctgttttgaaaagttctcccaaagag 38499882  T
Q  126 tct 128  Q
    |||    
T  38499881 tct 38499879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 47177629 - 47177683
Alignment:
Q  18 tataagctataagctgtttccataagctatattggagaatttataaaaataagct 72  Q
    ||||||||||||||||||| || ||||||| ||||||||||||| ||||||||||    
T  47177629 tataagctataagctgttttcaaaagctatcttggagaatttatgaaaataagct 47177683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 161
Target Start/End: Complemental strand, 27863815 - 27863659
Alignment:
Q  5 taaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataagctga 103  Q
    |||||| |||||||||| |||||||| |||||  |||| ||||||| ||||| |||| || |||||||||||| ||||| | |||| | ||  ||||||     
T  27863815 taaattttatttgtatatgctataagttgttttaataaactatattagagaacttatgaacataagctgaaaaaagtttttgaaaattttctcaagctgt 27863716  T
Q  104 tttaaaaagtgttcccaaatagtcttaacaaagcttatgtcagtagataagctcaaat 161  Q
    ||| | ||||  || ||||||||| | ||||| |||||| |||| |||||||||||||    
T  27863715 tttcataagttctctcaaatagtc-tcacaaaacttatgccagtggataagctcaaat 27863659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 174
Target Start/End: Original strand, 34744017 - 34744177
Alignment:
Q  14 tttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataagctgatttaaaaag 112  Q
    |||||||| | |||||| ||||| ||||||||||||||||||| |||||||||||||  ||||| || || | |||| ||||||||| |  ||| |  ||    
T  34744017 tttgtatatggtataagttgttttcataagctatattggagaacttataaaaataaggcgaaaaaagcttgtgaaaattgtcataagttcttttcattag 34744116  T
Q  113 tgttcccaaatagtcttaacaaagcttatgtcagtagataagctcaaatgagtcaatccaaa 174  Q
    |  | ||||| |||| | ||||| ||||||| ||||||||||||||||| | ||||| ||||    
T  34744117 ttcttccaaacagtc-tcacaaatcttatgttagtagataagctcaaattattcaattcaaa 34744177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 79
Target Start/End: Original strand, 44821948 - 44822013
Alignment:
Q  14 tttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaaca 79  Q
    |||||||||| |||||||||||| ||||||||||  ||||||| |||| |||||||| ||||||||    
T  44821948 tttgtataagttataagctgttttcataagctattctggagaacttatgaaaataagttgaaaaca 44822013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 129 - 187
Target Start/End: Complemental strand, 18962549 - 18962491
Alignment:
Q  129 taacaaagcttatgtcagtagataagctcaaatgagtcaatccaaaaaggccctaggtc 187  Q
    ||||||| |||||||||||||||||| || ||| | |||||||||| ||||||||||||    
T  18962549 taacaaaacttatgtcagtagataagatcgaataactcaatccaaacaggccctaggtc 18962491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 102
Target Start/End: Complemental strand, 20527003 - 20526921
Alignment:
Q  21 aagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaa-aatgtcataagctg 102  Q
    |||||| ||||||||| ||||||||||| || |||| |||| ||||||||||||||| |  ||||||| ||| ||||||||||    
T  20527003 aagctacaagctgttttcataagctatagtgtagaacttatgaaaataagctgaaaagatcttataaacaatctcataagctg 20526921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 116 - 174
Target Start/End: Complemental strand, 33266464 - 33266407
Alignment:
Q  116 tcccaaatagtcttaacaaagcttatgtcagtagataagctcaaatgagtcaatccaaa 174  Q
    ||||||||||| || ||||| |||||||| |||||||||||||||| ||||||||||||    
T  33266464 tcccaaatagt-ttcacaaaacttatgtcggtagataagctcaaataagtcaatccaaa 33266407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 14 - 79
Target Start/End: Original strand, 33678769 - 33678834
Alignment:
Q  14 tttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaaca 79  Q
    |||||| |||||||||||||||| |||||||||| ||||| || || | |||||||| ||||||||    
T  33678769 tttgtaaaagctataagctgttttcataagctatcttggaaaacttgtgaaaataagttgaaaaca 33678834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 85
Target Start/End: Complemental strand, 40689077 - 40688996
Alignment:
Q  4 ttaaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat 85  Q
    ||||||||| ||  ||||||||||||||||| | ||||||||||  |||| || |||| |||||||||| ||||||| ||||    
T  40689077 ttaaattattttcatataagctataagctgtgttcataagctatcctggataacttatgaaaataagctcaaaacagcttat 40688996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 14 - 180
Target Start/End: Original strand, 45593516 - 45593684
Alignment:
Q  14 tttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctg-aaaacagtttat-aaaaatgtcataagctgatttaaaaa 111  Q
    |||||||| |||||||||| |||   |||||||| |||||||| |||  ||||||| ||| |||| || |||| ||||||||||| || || ||| | ||    
T  45593516 tttgtatatgctataagctatttttctaagctatcttggagaacttacgaaaataaactggaaaaaagcttatgaaaaatgtcatcagatgtttttataa 45593615  T
Q  112 gtgttcccaaatagtcttaacaaagcttatgtcagt-agataagctcaaatgagtcaatccaaaaaggcc 180  Q
    ||  ||||||| ||||| | |||||||||||||||| | |||| ||||||| || ||||||||| |||||    
T  45593616 gttctcccaaacagtctca-caaagcttatgtcagtaatataaactcaaataagccaatccaaacaggcc 45593684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 79
Target Start/End: Original strand, 7244686 - 7244734
Alignment:
Q  31 ctgtttccataagctatattggagaatttataaaaataagctgaaaaca 79  Q
    |||||| ||||||||||||||||||  |||| |||||||||||||||||    
T  7244686 ctgttttcataagctatattggagagcttatgaaaataagctgaaaaca 7244734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 134 - 174
Target Start/End: Complemental strand, 11619119 - 11619079
Alignment:
Q  134 aagcttatgtcagtagataagctcaaatgagtcaatccaaa 174  Q
    |||||||||||||||||||||||||||| || |||||||||    
T  11619119 aagcttatgtcagtagataagctcaaataagccaatccaaa 11619079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 101
Target Start/End: Complemental strand, 6552365 - 6552286
Alignment:
Q  22 agctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagct 101  Q
    |||||||| || ||| ||||| ||||  || ||| ||||| |||||||||||||||||| |||| || ||||||||||||    
T  6552365 agctataaactattttcataaactatcatgcagagtttatgaaaataagctgaaaacagcttatgaatatgtcataagct 6552286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 17 - 80
Target Start/End: Original strand, 30535555 - 30535618
Alignment:
Q  17 gtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacag 80  Q
    |||||| |||||||||||||||||||||||| ||  ||||  ||| ||||||| ||||||||||    
T  30535555 gtataatctataagctgtttccataagctatcttatagaacatatgaaaataacctgaaaacag 30535618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 43694661 - 43694594
Alignment:
Q  4 ttaaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagc 71  Q
    ||||||| | |||||||| ||||||||||||||  ||||||||||| | |||| |||| |||||||||    
T  43694661 ttaaattgtttttgtatatgctataagctgtttttataagctatatcgaagaacttatgaaaataagc 43694594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 45790502 - 45790443
Alignment:
Q  18 tataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaa 77  Q
    ||||||||||||| |||||  |||| |||||||||| || |||| |||||||||||||||    
T  45790502 tataagctataagttgtttttataaactatattggataacttatgaaaataagctgaaaa 45790443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 182
Target Start/End: Original strand, 48470023 - 48470201
Alignment:
Q  4 ttaaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataagctg 102  Q
    ||||||| | ||||||||   |||||| ||||| |||||||||| ||| | || |||| || ||||||| |||| || |||| ||||||| |||||||||    
T  48470023 ttaaattgtttttgtatataatataagttgttttcataagctattttgaataacttatgaacataagctcaaaaaagcttatgaaaaatgccataagctg 48470122  T
Q  103 atttaaaaagtgttcccaaatagtcttaacaaagcttatgtcagtagataagctcaaatgagtcaatccaaaaaggccct 182  Q
     ||| | ||||  ||||||| | ||| |  ||| ||||||||  ||||||||||||||| || |||||| || |||||||    
T  48470123 ttttcataagttctcccaaacaatctcataaaa-cttatgtctatagataagctcaaataagccaatcctaacaggccct 48470201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 174
Target Start/End: Original strand, 1418530 - 1418568
Alignment:
Q  136 gcttatgtcagtagataagctcaaatgagtcaatccaaa 174  Q
    ||||||| |||||||||||||||||| ||||||||||||    
T  1418530 gcttatgccagtagataagctcaaataagtcaatccaaa 1418568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 156
Target Start/End: Complemental strand, 19022657 - 19022524
Alignment:
Q  23 gctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataagctgatttaaaaagtgttcccaa 121  Q
    |||||||| |||||  |||||||||||||||||| |||| |||||||| |||| |||  |||| |||| ||||||||| || ||| | || |  ||||||    
T  19022657 gctataagttgtttttataagctatattggagaacttatgaaaataagttgaagacaacttatgaaaattgtcataagttgttttcataaattctcccaa 19022558  T
Q  122 atagtcttaacaaagcttatgtcagtagataagct 156  Q
    | | || | ||||| || |||||||||||||||||    
T  19022557 acaatc-tcacaaaactcatgtcagtagataagct 19022524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 99
Target Start/End: Original strand, 19719007 - 19719080
Alignment:
Q  25 tataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataag 99  Q
    |||||| ||||| ||||| |||| |||||  | ||||||| |||||||||||||||||||| || ||||||||||    
T  19719007 tataagttgttttcataa-ctatcttggatcacttataaagataagctgaaaacagtttatgaacatgtcataag 19719080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 86
Target Start/End: Complemental strand, 22283835 - 22283753
Alignment:
Q  4 ttaaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttata 86  Q
    ||||||| | ||||||| |||||||| |||||| ||||| | || || ||||| ||||  ||||||||||||||||| |||||    
T  22283835 ttaaattgtttttgtatcagctataaactgttttcataaaccatcttagagaacttatggaaataagctgaaaacagcttata 22283753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 161
Target Start/End: Complemental strand, 33601500 - 33601344
Alignment:
Q  4 ttaaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataagctg 102  Q
    ||||||||| |||||||  |||||||| |||||  ||||||||| || ||||| |||| ||  ||||||||||| || |||| |||| ||||||||||||    
T  33601500 ttaaattatttttgtatttgctataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctg 33601402  T
Q  103 atttaaaaagtgttcccaaatagtcttaacaaagcttatgtcagtagataagctcaaat 161  Q
     ||| | ||||  ||  ||| |||| | ||||| |||||| || |||||||||||||||    
T  33601401 ttttcataagttctcgaaaagagtc-tcacaaaacttatgccaatagataagctcaaat 33601344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 183
Target Start/End: Original strand, 39771869 - 39771919
Alignment:
Q  133 aaagcttatgtcagtagataagctcaaatgagtcaatccaaaaaggcccta 183  Q
    ||||||||||||| ||||||||||||||| | |||| ||||| ||||||||    
T  39771869 aaagcttatgtcaatagataagctcaaataactcaacccaaacaggcccta 39771919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 137 - 174
Target Start/End: Original strand, 9210933 - 9210970
Alignment:
Q  137 cttatgtcagtagataagctcaaatgagtcaatccaaa 174  Q
    ||||| ||||||||||||||||||| ||||||||||||    
T  9210933 cttatatcagtagataagctcaaataagtcaatccaaa 9210970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 99
Target Start/End: Complemental strand, 46281217 - 46281136
Alignment:
Q  18 tataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataag 99  Q
    |||| ||||||||||||||  |||||||||  |||||   ||||| |||||||||||||||| |||||| | ||| ||||||    
T  46281217 tataggctataagctgtttttataagctattctggagggcttatataaataagctgaaaacaatttatagacatggcataag 46281136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 24 - 101
Target Start/End: Complemental strand, 47559672 - 47559595
Alignment:
Q  24 ctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagct 101  Q
    ||||||||||||| |||||| ||| |||||||| |||| ||||| ||| |||||||  |||| || |||||| |||||    
T  47559672 ctataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaacatgtcaaaagct 47559595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 102
Target Start/End: Original strand, 9038109 - 9038188
Alignment:
Q  22 agctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagctg 102  Q
    |||||||| |||||| ||||| ||||  ||||||| || | |||||||||||||||||  |||| || |||||||||||||    
T  9038109 agctataaactgttttcataaactatcatggagaacttgtgaaaataagctgaaaaca-attatgaacatgtcataagctg 9038188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 12792632 - 12792576
Alignment:
Q  26 ataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtt 82  Q
    ||||||| ||| |||||||||| ||| |||  |||| ||||||||||||||||||||    
T  12792632 ataagctattttcataagctatcttgaagagcttatgaaaataagctgaaaacagtt 12792576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 174
Target Start/End: Original strand, 24975989 - 24976025
Alignment:
Q  138 ttatgtcagtagataagctcaaatgagtcaatccaaa 174  Q
    |||||| ||||||||||||||||| ||||||||||||    
T  24975989 ttatgttagtagataagctcaaattagtcaatccaaa 24976025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 180
Target Start/End: Complemental strand, 30748993 - 30748949
Alignment:
Q  136 gcttatgtcagtagataagctcaaatgagtcaatccaaaaaggcc 180  Q
    |||||||||||||||||||||||||| | ||||| |||| |||||    
T  30748993 gcttatgtcagtagataagctcaaataactcaattcaaacaggcc 30748949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 74
Target Start/End: Complemental strand, 40252188 - 40252128
Alignment:
Q  14 tttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctga 74  Q
    |||||||| | |||||||| ||| |||||| ||| |||||||| |||| ||||||||||||    
T  40252188 tttgtatatgttataagctcttttcataagttatcttggagaacttatgaaaataagctga 40252128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 77
Target Start/End: Original strand, 43648240 - 43648292
Alignment:
Q  25 tataagctgtttccataagctatattggagaatttataaaaataagctgaaaa 77  Q
    |||||||||||| |||||||||| ||||||||  ||| |||||||| ||||||    
T  43648240 tataagctgttttcataagctatcttggagaaaatatgaaaataagttgaaaa 43648292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 174
Target Start/End: Complemental strand, 47046065 - 47046029
Alignment:
Q  138 ttatgtcagtagataagctcaaatgagtcaatccaaa 174  Q
    |||||||||||||||||| ||||| ||||||||||||    
T  47046065 ttatgtcagtagataagcacaaataagtcaatccaaa 47046029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 64; Significance: 5e-28; HSPs: 68)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 5 - 183
Target Start/End: Complemental strand, 34736617 - 34736439
Alignment:
Q  5 taaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaa-taagctgaaaacagtttataaaaatgtcataagctga 103  Q
    |||||||| |||||||||||||||| |||||  ||| |||||| ||||||||||||||||||  |||||| |||||| ||||||| ||||||| |||||     
T  34736617 taaattatttttgtataagctataaactgttatcattagctatcttggagaatttataaaaacaaagctgtaaacagcttataaacatgtcattagctgt 34736518  T
Q  104 tttaaaaagtgttcccaaatagtcttaacaaagcttatgtcagtagataagctcaaatgagtcaatccaaaaaggcccta 183  Q
     || ||||||  |||||||  ||| | ||||| |||||||||  |||||||||||||| |||||||||||| | ||||||    
T  34736517 gttcaaaagttctcccaaactgtc-tcacaaaacttatgtcaccagataagctcaaataagtcaatccaaacatgcccta 34736439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 18 - 172
Target Start/End: Complemental strand, 9202825 - 9202671
Alignment:
Q  18 tataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataagctgatttaaaaagtgtt 116  Q
    ||||||| ||||||||||| |||||| ||| ||| |||| |||| ||||||||||| |||||| |||| || |||||||||||||| ||  |  ||| ||    
T  9202825 tataagcaataagctgttttcataagttatcttgaagaacttatgaaaataagctggaaacagcttatgaacaatgtcataagctgtttccattagtttt 9202726  T
Q  117 cccaaatagtcttaacaaagcttatgtcagtagataagctcaaatgagtcaatcca 172  Q
    || |||||||||| ||||| |||||| ||| |||||||||||||| ||||||||||    
T  9202725 ccgaaatagtctt-acaaaacttatgccaggagataagctcaaataagtcaatcca 9202671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 23 - 102
Target Start/End: Complemental strand, 32703348 - 32703269
Alignment:
Q  23 gctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagctg 102  Q
    |||||||| ||||| |||||||||| | ||||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  32703348 gctataagttgttttcataagctatctaggagaatttataaaaataagctgaaaacagtttataaacgtgtcataagctg 32703269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 21 - 170
Target Start/End: Original strand, 7984965 - 7985114
Alignment:
Q  21 aagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataagctgatttaaaaagtgttccc 119  Q
    |||||||||||| ||| |||||||||| ||||||||||||| |||||||||||||||||| |||| || || |||| |||||| |||   |||   ||||    
T  7984965 aagctataagcttttttcataagctatcttggagaatttatgaaaataagctgaaaacagcttatgaacaacgtcacaagctgttttcttaagctctccc 7985064  T
Q  120 aaatagtcttaacaaagcttatgtcagtagataagctcaaatgagtcaatc 170  Q
    |||||||| | |||||||||||| |||||||||| ||||||| || |||||    
T  7985065 aaatagtc-tcacaaagcttatgccagtagataatctcaaattagccaatc 7985114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 174
Target Start/End: Complemental strand, 16937974 - 16937804
Alignment:
Q  4 ttaaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataagctg 102  Q
    ||||||| | |||||||| |||||||| |||||  ||| |||||||||||||| |||  ||||||||||||||| || |||| |||  ||||||||||||    
T  16937974 ttaaattgtttttgtatatgctataagttgtttttatacgctatattggagaacttaggaaaataagctgaaaaaagcttatgaaatttgtcataagctg 16937875  T
Q  103 atttaaaaagtgttcccaaatagtcttaacaaagcttatgtcagtagataagctcaaatgagtcaatccaaa 174  Q
     ||| | ||||  | ||||| | || | ||||| ||||||  ||||||||||||||||| || |||||||||    
T  16937874 ttttcataagttcttccaaacactc-tcacaaaacttatgctagtagataagctcaaataagccaatccaaa 16937804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 102
Target Start/End: Original strand, 39105443 - 39105542
Alignment:
Q  4 ttaaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataagctg 102  Q
    ||||||| | || ||||||||||||| |||||| |||||||||| |||||||| |||| |||||||||| |||| || |||| || ||||||||||||||    
T  39105443 ttaaattgttttcgtataagctataatctgttttcataagctatcttggagaacttatgaaaataagctaaaaatagcttatgaacaatgtcataagctg 39105542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 17 - 102
Target Start/End: Complemental strand, 6587185 - 6587100
Alignment:
Q  17 gtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagctg 102  Q
    |||||||||||||| ||||| ||||||||||| ||||||| || | ||||||||||| |||||| |||| ||  ||||||||||||    
T  6587185 gtataagctataagttgttttcataagctatagtggagaacttgtgaaaataagctgtaaacagcttatgaacctgtcataagctg 6587100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 99
Target Start/End: Original strand, 7674641 - 7674722
Alignment:
Q  18 tataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataag 99  Q
    ||||||| ||||  ||||| |||||||||| ||||||||||| | |||||||||||||||||  ||||||| ||||||||||    
T  7674641 tataagccataaaatgttttcataagctatcttggagaatttgtgaaaataagctgaaaacaccttataaacatgtcataag 7674722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 85
Target Start/End: Complemental strand, 4014493 - 4014434
Alignment:
Q  26 ataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat 85  Q
    ||||||||||| |||||||||| |||||||| |||| |||||||||||||||||| ||||    
T  4014493 ataagctgttttcataagctatcttggagaacttatgaaaataagctgaaaacagcttat 4014434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 79
Target Start/End: Original strand, 12425550 - 12425625
Alignment:
Q  4 ttaaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaaca 79  Q
    ||||||| | || |||||||||||||||||||| || ||||||| |||||||| |||| |||||||| ||||||||    
T  12425550 ttaaattgttttcgtataagctataagctgttttcacaagctatcttggagaacttatgaaaataagttgaaaaca 12425625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 174
Target Start/End: Complemental strand, 36796782 - 36796628
Alignment:
Q  19 ataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagctgatttaaaaagtgttcc 118  Q
    |||||||||||||||||| |||  ||||||||||| || ||| |||||||| |||||||||| |||| ||  |||  ||| ||| ||| |||||| || |    
T  36796782 ataagctataagctgttttcatttgctatattggaaaacttacaaaaataaactgaaaacagcttatgaacgtgtagtaaactg-tttcaaaagtttttc 36796684  T
Q  119 caaatagtcttaacaaagcttatgtcagtagataagctcaaatgagtcaatccaaa 174  Q
    |||  ||||| |  |  | |||||||| ||||||||||||||| ||||||||||||    
T  36796683 caagcagtctcacaagtgtttatgtcattagataagctcaaataagtcaatccaaa 36796628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 7319399 - 7319457
Alignment:
Q  18 tataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaa 76  Q
    |||||||||||| |||||| | |||||||| |||||||| |||||||||||||||||||    
T  7319399 tataagctataaactgttttcgtaagctatcttggagaacttataaaaataagctgaaa 7319457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 17 - 79
Target Start/End: Complemental strand, 10272509 - 10272447
Alignment:
Q  17 gtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaaca 79  Q
    |||||||||||||| ||||| ||||||| || ||||||| ||||| |||||||||||||||||    
T  10272509 gtataagctataagttgttttcataagccatcttggagagtttatgaaaataagctgaaaaca 10272447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 32 - 181
Target Start/End: Original strand, 10639960 - 10640109
Alignment:
Q  32 tgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataagctgatttaaaaagtgttcccaaatagtctta 130  Q
    ||||| ||||| |||| |||||||| |||| ||||||||||  ||| || |||| ||||||||||||||||| ||| | ||||  ||||||| | |  |     
T  10639960 tgtttacataaactattttggagaacttatgaaaataagctagaaaaagcttatgaaaaatgtcataagctgttttcataagttctcccaaacaat-atc 10640058  T
Q  131 acaaagcttatgtcagtagataagctcaaatgagtcaatccaaaaaggccc 181  Q
    ||||| ||||||||||||||||| ||||||| ||  |||||||| ||||||    
T  10640059 acaaaacttatgtcagtagataaactcaaataagctaatccaaacaggccc 10640109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 161
Target Start/End: Original strand, 15246812 - 15246969
Alignment:
Q  4 ttaaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataagctg 102  Q
    ||||| ||| || ||||||||||| |||||||| |||||||||| || ||||| | ||||||||||| || ||| |  |||| ||  |||||||||| ||    
T  15246812 ttaaactattttcgtataagctatgagctgttttcataagctatcttagagaaatgataaaaataagttgcaaaaaacttatgaatgatgtcataagttg 15246911  T
Q  103 atttaaaaagtgttcccaaatagtcttaacaaagcttatgtcagtagataagctcaaat 161  Q
     ||| | ||||  ||||||| | || ||| ||| |||||||||||||||||||||||||    
T  15246912 ctttcataagttctcccaaacattc-taataaaacttatgtcagtagataagctcaaat 15246969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 14 - 80
Target Start/End: Original strand, 36318763 - 36318829
Alignment:
Q  14 tttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacag 80  Q
    |||||||||| | |||| ||||| |||||||||| |||||||||||||  |||||||||||||||||    
T  36318763 tttgtataagttttaagttgttttcataagctatcttggagaatttatgtaaataagctgaaaacag 36318829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 21 - 174
Target Start/End: Original strand, 41534437 - 41534587
Alignment:
Q  21 aagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagctgatttaaaaagtgttccca 120  Q
    |||||||||| ||||| |||||||||| || ||||| ||  | |||||| |||||||||| |||| ||   ||||||||||| ||| | ||||  |||||    
T  41534437 aagctataagttgttttcataagctatttttgagaacttgaagaaataatctgaaaacagcttatgaac--gtcataagctgttttcacaagttatccca 41534534  T
Q  121 aatagtcttaacaaagcttatgtcagtagataagctcaaatgagtcaatccaaa 174  Q
    || | ||| | ||||  |||||||||||||| ||||||||| ||||||||||||    
T  41534535 aacaatctca-caaaatttatgtcagtagattagctcaaataagtcaatccaaa 41534587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 1619082 - 1619166
Alignment:
Q  17 gtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagctg 102  Q
    |||||||||||||||||||| ||||||| || |||||||   ||| ||||| |||||||||||||||||  ||||| |||||||||    
T  1619082 gtataagctataagctgttttcataagccat-ttggagagcatatgaaaatcagctgaaaacagtttatgtaaatggcataagctg 1619166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 102
Target Start/End: Complemental strand, 23994797 - 23994708
Alignment:
Q  14 tttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagttta-taaaaatgtcataagctg 102  Q
    |||||||| |||||||||| ||| || ||||||| ||| |||| ||||||||||||| |||||| |||||| |||||| ||| |||||||    
T  23994797 tttgtatatgctataagctattttcacaagctatcttgtagaaattataaaaataagttgaaaaaagtttattaaaaacgtcgtaagctg 23994708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 99
Target Start/End: Complemental strand, 25461397 - 25461312
Alignment:
Q  14 tttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataag 99  Q
    |||| ||||||||||| |||||| ||||| |||| |||| | |||||| |||||||||||||||||| | || || ||||||||||    
T  25461397 tttgcataagctataaactgttttcataacctatcttggcgtatttatgaaaataagctgaaaacagctaatgaacatgtcataag 25461312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 181
Target Start/End: Original strand, 40426745 - 40426921
Alignment:
Q  5 taaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataagctga 103  Q
    |||||| | |||||||  ||| |||||||||||| |||||| | |||||||| |||  |||||||||| |||| || |||| ||||||| |||||||||     
T  40426745 taaattgtttttgtatttgctgtaagctgtttccgtaagctgtcttggagaacttacgaaaataagcttaaaaaagcttatgaaaaatggcataagctgt 40426844  T
Q  104 tttaaaaagtgttcccaaatagtcttaacaaagcttatgtcagtagataagctcaaatgagtcaatccaaaaaggccc 181  Q
    ||| | |||    |||||| |||| | |||||  |||||||| ||||||||||||||| |||||| | ||| ||||||    
T  40426845 tttcataagcacccccaaacagtc-tcacaaaatttatgtcattagataagctcaaataagtcaaccaaaacaggccc 40426921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 42582907 - 42582972
Alignment:
Q  20 taagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat 85  Q
    |||| ||||||||||||   ||||||||||||||||| |||| |||||||||| ||||||||||||    
T  42582907 taaggtataagctgtttttgtaagctatattggagaacttatgaaaataagctcaaaacagtttat 42582972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 105
Target Start/End: Original strand, 25461080 - 25461172
Alignment:
Q  14 tttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataagctgatt 105  Q
    |||||||| | |||||| ||||| |||||||| |||||||||| | || |||||||||||||||  |||||| |||| || ||||||||||||    
T  25461080 tttgtatatgttataagttgttttcataagctctattggagaactgatgaaaataagctgaaaaacgtttatgaaaattgccataagctgatt 25461172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 27 - 174
Target Start/End: Original strand, 39594809 - 39594956
Alignment:
Q  27 taagctgtttccataagctatattggagaatttataaaaataagctgaaaacagttta-taaaaatgtcataagctgatttaaaaagtgttcccaaatag 125  Q
    |||||||||| |||||| ||| |||  ||| |||| |||||||||||||||||  ||| ||| | | || | ||||| ||| | ||||  ||||||| |     
T  39594809 taagctgttttcataagatatcttgttgaacttatgaaaataagctgaaaacaacttaataacattatcttcagctgttttcataagttgtcccaaacaa 39594908  T
Q  126 tcttaacaaagcttatgtcagtagataagctcaaatgagtcaatccaaa 174  Q
    ||| |||||| |||||||| |||||||||||||||| ||||||||||||    
T  39594909 tct-aacaaaacttatgtcggtagataagctcaaataagtcaatccaaa 39594956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 80
Target Start/End: Original strand, 42569753 - 42569813
Alignment:
Q  20 taagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacag 80  Q
    ||||||||||||||| | |||||| ||  |||||||| |||||||||||||||||||||||    
T  42569753 taagctataagctgtcttcataaggtagcttggagaacttataaaaataagctgaaaacag 42569813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 174
Target Start/End: Original strand, 41419315 - 41419468
Alignment:
Q  20 taagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaa-aatgtcataagctgatttaaaaagtgttcc 118  Q
    ||||||||||| ||||| |||||||||| || |||| || || ||| ||| ||||||| || | || || |||||||||||||| ||| | ||||  |||    
T  41419315 taagctataagttgttttcataagctatttttgagacttaatgaaa-taatctgaaaatagctcatgaacaatgtcataagctgttttcacaagttatcc 41419413  T
Q  119 caaatagtcttaacaaagcttatgtcagtagataagctcaaatgagtcaatccaaa 174  Q
    |||| | ||| | ||||  |||||||||||||| ||||||||| ||||||||||||    
T  41419414 caaacaatctca-caaaatttatgtcagtagattagctcaaataagtcaatccaaa 41419468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 12494878 - 12494820
Alignment:
Q  16 tgtataagctataagctgtttccataagctatattggagaatttataaaaataagctga 74  Q
    ||||||||||||||||||||| |||| |||||  || |||| |||||||||||||||||    
T  12494878 tgtataagctataagctgttttcataggctatcgtgtagaacttataaaaataagctga 12494820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 174
Target Start/End: Complemental strand, 12857424 - 12857259
Alignment:
Q  9 ttatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataagctgattta 107  Q
    |||| |||||| | ||||| ||||| ||  |||||||||||||||||| ||| |||||||||||||||| || || | |||| ||||||||| || |||     
T  12857424 ttatttttgtacatgctattagctgattttataagctatattggagaacttacaaaaataagctgaaaaaagcttgtgaaaattgtcataagttgttttc 12857325  T
Q  108 aaaagtgttcccaaatagtcttaacaaagcttatgtcagtagataagctcaaatgagtcaatccaaa 174  Q
    | ||||  |||  || ||| || ||||| |||| |||| ||||||||||||||| |  |||||||||    
T  12857324 ataagttctccggaaaagt-ttcacaaaacttacgtcaatagataagctcaaataaaccaatccaaa 12857259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 77
Target Start/End: Original strand, 29925839 - 29925893
Alignment:
Q  23 gctataagctgtttccataagctatattggagaatttataaaaataagctgaaaa 77  Q
    |||||||| ||||| ||||||||||||||||||| |||| |||||||| ||||||    
T  29925839 gctataagttgtttacataagctatattggagaacttatgaaaataagttgaaaa 29925893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 39 - 183
Target Start/End: Complemental strand, 3932732 - 3932588
Alignment:
Q  39 ataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatg-tcataagctgatttaaaaagtgttcccaaatagtcttaacaaagc 137  Q
    |||||||| | ||||||| |||  ||||||||||| ||| || |||| |||||  |||||||||| |||   |||| ||| |||| ||||| | ||||||    
T  3932732 ataagctagactggagaacttacgaaaataagctgtaaaaagcttatgaaaattatcataagctgtttttgcaagttttctcaaacagtctca-caaagc 3932634  T
Q  138 ttatgtcagtagataagctcaaatgagtcaatccaaaaaggcccta 183  Q
    ||||||   ||||||||||||||| |||||||||||| || |||||    
T  3932633 ttatgttgttagataagctcaaattagtcaatccaaacagtcccta 3932588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 25 - 98
Target Start/End: Original strand, 11707055 - 11707128
Alignment:
Q  25 tataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataa 98  Q
    |||||||||||| |||||||||| ||| |||  || | |||||||||||||||||  ||||||| |||||||||    
T  11707055 tataagctgttttcataagctatcttgtagagcttttgaaaataagctgaaaacaacttataaacatgtcataa 11707128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 25 - 86
Target Start/End: Original strand, 32197720 - 32197781
Alignment:
Q  25 tataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttata 86  Q
    |||||||||||||||||||||||  || |||| |||| |||||||| ||||||||| |||||    
T  32197720 tataagctgtttccataagctatcctgaagaacttatgaaaataagatgaaaacagcttata 32197781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 14 - 79
Target Start/End: Original strand, 36326000 - 36326065
Alignment:
Q  14 tttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaaca 79  Q
    |||||||||| |||||| || || | |||||||| |||||||||||||  ||||||||||||||||    
T  36326000 tttgtataagttataagttgctttcgtaagctatcttggagaatttatgtaaataagctgaaaaca 36326065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 51 - 174
Target Start/End: Complemental strand, 499775 - 499652
Alignment:
Q  51 ggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagctgatttaaaaagtgttcccaaatagtcttaacaaa-gcttatgtcagtag 149  Q
    ||||| |||||  ||||||||||||||||  || | || ||||||||||||| ||| | ||||  ||||||| || || ||||   ||||||||||||||    
T  499775 ggagagtttatggaaataagctgaaaacaacttgttaacatgtcataagctgttttcataagttctcccaaacagcct-aacaggtgcttatgtcagtag 499677  T
Q  150 ataagctcaaatgagtcaatccaaa 174  Q
     ||||||||||| ||||||||||||    
T  499676 gtaagctcaaataagtcaatccaaa 499652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 182
Target Start/End: Complemental strand, 7706054 - 7705911
Alignment:
Q  39 ataagctatattggagaatttataaaaataagctgaaaacagtttataaaaa-tgtcataagctgatttaaaaagtgttcccaaatagtcttaacaaagc 137  Q
    |||||||||||||||||| || | ||||||||| ||||| ||    | |||| |||||||||||| ||| | ||||  ||||||| || | | ||||| |    
T  7706054 ataagctatattggagaacttgtgaaaataagccgaaaaaagcaggtgaaaactgtcataagctgttttcataagttctcccaaagag-cgtcacaaaac 7705956  T
Q  138 ttatgtcagtagataagctcaaatgagtcaatccaaaaaggccct 182  Q
    |||||  |||||||| |||||||| |||||||||||| |||||||    
T  7705955 ttatgctagtagatatgctcaaataagtcaatccaaacaggccct 7705911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 174
Target Start/End: Original strand, 14331400 - 14331515
Alignment:
Q  58 ttataaaaataagctgaaaacagtttataaaaatgtcataagctgatttaaaaagtgttcccaaatagtcttaacaaagcttatgtcagtagataagctc 157  Q
    |||| |||||||||||||| ||| ||||  | ||||||||||||| |||  || || || ||||| | ||| || |  ||||||| ||||||||||||||    
T  14331400 ttatgaaaataagctgaaatcagcttatggacatgtcataagctgttttgtaa-gtttttccaaacaatctcaagagtgcttatgacagtagataagctc 14331498  T
Q  158 aaatgagtcaatccaaa 174  Q
    |||| ||||||||||||    
T  14331499 aaataagtcaatccaaa 14331515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 85
Target Start/End: Original strand, 34160731 - 34160791
Alignment:
Q  25 tataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat 85  Q
    |||||||| ||| ||| || ||| |||||||| |||| |||||||||||||||||||||||    
T  34160731 tataagctattttcattagatatcttggagaacttatgaaaataagctgaaaacagtttat 34160791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 4620181 - 4620224
Alignment:
Q  13 atttgtataagctataagctgtttccataagctatattggagaa 56  Q
    ||||| |||||||||||||||||| |||||||||| ||||||||    
T  4620181 atttgcataagctataagctgttttcataagctatgttggagaa 4620224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 40 - 174
Target Start/End: Original strand, 9107105 - 9107239
Alignment:
Q  40 taagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataagctgatttaaaaagtgttcccaaatagtcttaacaaagct 138  Q
    |||| |||||||||||| |||| ||||| ||| ||||| ||||| | |||| |||| ||||||| ||| |  |||  ||||||| | || | ||||| ||    
T  9107105 taagttatattggagaacttatgaaaattagcagaaaaaagtttgtgaaaattgtcctaagctgttttcatgagttctcccaaacattc-tcacaaaact 9107203  T
Q  139 tatgtcagtagataagctcaaatgagtcaatccaaa 174  Q
    ||||||| ||||||| ||||||| ||||||||||||    
T  9107204 tatgtcactagataaactcaaataagtcaatccaaa 9107239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 26 - 101
Target Start/End: Complemental strand, 17258952 - 17258877
Alignment:
Q  26 ataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagct 101  Q
    ||||||||||| ||||| ||||  || |||  |||| |||||||||||||||||| |||| || ||||||||||||    
T  17258952 ataagctgttttcataaactatcctgaagagcttatgaaaataagctgaaaacagcttatgaacatgtcataagct 17258877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 79
Target Start/End: Complemental strand, 7319078 - 7319024
Alignment:
Q  25 tataagctgtttccataagctatattggagaatttataaaaataagctgaaaaca 79  Q
    ||||| |||||| |||||||||| |||||||| |||| |||||||||||| ||||    
T  7319078 tataaactgttttcataagctatcttggagaacttatgaaaataagctgagaaca 7319024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 77
Target Start/End: Complemental strand, 12857761 - 12857723
Alignment:
Q  39 ataagctatattggagaatttataaaaataagctgaaaa 77  Q
    |||||||||||||||||| |||| |||||||||||||||    
T  12857761 ataagctatattggagaacttatgaaaataagctgaaaa 12857723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 174
Target Start/End: Original strand, 14932362 - 14932445
Alignment:
Q  89 aatgtcataagctgatttaaaaagtgttcccaaatagtcttaacaaagcttatgtcagtagataagctcaaatgagtcaatccaaa 174  Q
    ||||||||||| || ||| | ||||  ||||||| | ||||||||| |  || |||||||||||||||||||| ||||||||||||    
T  14932362 aatgtcataagttgttttgacaagttctcccaaacaatcttaacaacg--taggtcagtagataagctcaaataagtcaatccaaa 14932445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 161
Target Start/End: Original strand, 15015949 - 15015979
Alignment:
Q  131 acaaagcttatgtcagtagataagctcaaat 161  Q
    |||||||||||||||||||||||||||||||    
T  15015949 acaaagcttatgtcagtagataagctcaaat 15015979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 28776985 - 28777051
Alignment:
Q  17 gtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagttt 83  Q
    ||||| |||||||||||||| |||||||||| |||||||| | || |||||||| | |||| |||||    
T  28776985 gtataggctataagctgttttcataagctatcttggagaactaatgaaaataagataaaaatagttt 28777051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 182
Target Start/End: Original strand, 35299880 - 35299922
Alignment:
Q  140 atgtcagtagataagctcaaatgagtcaatccaaaaaggccct 182  Q
    |||||| ||||||||||||||| |||||||||||| |||||||    
T  35299880 atgtcaatagataagctcaaataagtcaatccaaacaggccct 35299922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 182
Target Start/End: Complemental strand, 40439023 - 40438867
Alignment:
Q  25 tataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataagctgatttaaaaagtgttcccaaat 123  Q
    |||||||||||| ||| | |||| ||||||||  ||| |||||||  |||||| || |||| |||||||||| ||| || ||| ||| ||  |||||||     
T  40439023 tataagctgttttcatgacctatcttggagaacatatgaaaataaattgaaaa-agcttatgaaaaatgtcacaagttgttttcaaatgttctcccaaa- 40438926  T
Q  124 agtcttaacaaagcttatgtcagtagataagctcaaatgagtcaatccaaaaaggccct 182  Q
     ||||| ||||| |||||| |||||||| ||| ||||| || ||||||||| |||||||    
T  40438925 cgtctttacaaaacttatgccagtagatgagcccaaataagccaatccaaagaggccct 40438867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 102
Target Start/End: Complemental strand, 41957526 - 41957444
Alignment:
Q  20 taagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagctg 102  Q
    |||| |||||||||||| ||||||||||  | ||||| |||| |||||||| ||||||||  ||||  | |||||||||||||    
T  41957526 taagttataagctgttttcataagctatccttgagaacttatgaaaataagatgaaaacaacttatggacatgtcataagctg 41957444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 2568650 - 2568735
Alignment:
Q  17 gtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagctg 102  Q
    |||||||||||||| ||||| ||||||||||  ||||||  | || |||||||||| |||| |  |||| || |||||||||||||    
T  2568650 gtataagctataagttgttttcataagctatcatggagagctaatgaaaataagctaaaaataacttatgaatatgtcataagctg 2568735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 101
Target Start/End: Original strand, 5559704 - 5559801
Alignment:
Q  4 ttaaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagct 101  Q
    ||||||| | || |||||||||||||| ||||| ||| |||||| ||  |||  ||||||||| ||||||| ||| || || ||| ||||||||||||    
T  5559704 ttaaattgttttagtataagctataagttgttttcattagctatcttttagaggttataaaaacaagctgacaactgtctaaaaacatgtcataagct 5559801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 99
Target Start/End: Original strand, 12467166 - 12467207
Alignment:
Q  58 ttataaaaataagctgaaaacagtttataaaaatgtcataag 99  Q
    |||| |||||||||||||||||| ||||||| ||||||||||    
T  12467166 ttatgaaaataagctgaaaacagcttataaacatgtcataag 12467207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 21 - 102
Target Start/End: Complemental strand, 14674974 - 14674893
Alignment:
Q  21 aagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagctg 102  Q
    |||||||||| ||||  |||||| |||  || |||| |||| |||||| | | ||||||||||||||| |||||||||||||    
T  14674974 aagctataagttgttctcataagatatcctgtagaacttatgaaaatatgtttaaaacagtttataaacatgtcataagctg 14674893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 14 - 99
Target Start/End: Original strand, 17368665 - 17368750
Alignment:
Q  14 tttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataag 99  Q
    ||||| ||| ||||||| ||||| |||||||||| |||||||  ||||  ||||||||||||||| |  ||| || ||||||||||    
T  17368665 tttgtgtaatctataagttgttttcataagctatcttggagaggttatggaaataagctgaaaactgcatatgaacatgtcataag 17368750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 21 - 85
Target Start/End: Complemental strand, 29845509 - 29845444
Alignment:
Q  21 aagctataagctgtttc-cataagctatattggagaatttataaaaataagctgaaaacagtttat 85  Q
    ||||||||||||||||  | |||||||| |||||||| |||| || ||||||||||||||| ||||    
T  29845509 aagctataagctgtttttcgtaagctatcttggagaagttatgaatataagctgaaaacagcttat 29845444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 15 - 174
Target Start/End: Original strand, 32009682 - 32009842
Alignment:
Q  15 ttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacag-tttat-aaaaatgtcataagctgatttaaaaag 112  Q
    ||||||| |||||||  |||||  |||||||||||||||||| |||| |||| ||| | |||| || ||||| |||| ||||| |||||| ||| | |||    
T  32009682 ttgtatatgctataaattgtttttataagctatattggagaacttatgaaaacaagttcaaaaaagctttatgaaaattgtcacaagctgttttcataag 32009781  T
Q  113 tgttcccaaatagtcttaacaaagcttatgtcagtagataagctcaaatgagtcaatccaaa 174  Q
    | || |||||||||| | ||||| |||| ||||  |||||  |||||||  |||||||||||    
T  32009782 tttttccaaatagtc-tcacaaaacttaggtcaacagatagactcaaatatgtcaatccaaa 32009842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 99
Target Start/End: Complemental strand, 32194156 - 32194075
Alignment:
Q  18 tataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataag 99  Q
    ||||||||||||| |||||   |||||||| || ||||  ||||| ||||||||||||||||  ||||  ||||||||||||    
T  32194156 tataagctataagatgtttttttaagctatctttgagagcttatataaataagctgaaaacaacttatggaaatgtcataag 32194075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 26 - 95
Target Start/End: Original strand, 42583150 - 42583219
Alignment:
Q  26 ataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtca 95  Q
    ||||||||||| |||||  |||  ||||||| |||| ||  |||||||||||||||||||||| ||||||    
T  42583150 ataagctgttttcataatttatcgtggagaacttatgaatgtaagctgaaaacagtttataaacatgtca 42583219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 443924 - 443964
Alignment:
Q  14 tttgtataagctataagctgtttccataagctatattggag 54  Q
    ||||||||||||||||| ||||| |||||||||| ||||||    
T  443924 tttgtataagctataagatgttttcataagctatcttggag 443964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 102
Target Start/End: Original strand, 3977297 - 3977385
Alignment:
Q  14 tttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagctg 102  Q
    ||||||||| | ||||||||||| |||||| | |  ||||||| |||| ||||||||||||| |||| | |  || |||||||||||||    
T  3977297 tttgtataacccataagctgttttcataagttgttgtggagaaattatgaaaataagctgaagacagctaaggaacatgtcataagctg 3977385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 102
Target Start/End: Original strand, 6096546 - 6096625
Alignment:
Q  26 ataagctgtttccataagctatatt--ggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataagctg 102  Q
    |||||||||||||||||||||| ||  | ||||||||| ||||| |||||| ||||| |||| || ||||||| ||||||    
T  6096546 ataagctgtttccataagctatttttggcagaatttatgaaaatgagctgagaacagcttatgaacaatgtcacaagctg 6096625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 102
Target Start/End: Original strand, 14295499 - 14295583
Alignment:
Q  18 tataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagctg 102  Q
    ||||||||||||||||||| | ||||||||  ||||||  || || || |||||||||||||| ||||  | || ||||||||||    
T  14295499 tataagctataagctgttttcgtaagctatcctggagagcttttagaagtaagctgaaaacagcttatcgacatatcataagctg 14295583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 174
Target Start/End: Complemental strand, 14706241 - 14706205
Alignment:
Q  138 ttatgtcagtagataagctcaaatgagtcaatccaaa 174  Q
    |||||||||||| ||||||||||| ||||||||||||    
T  14706241 ttatgtcagtaggtaagctcaaataagtcaatccaaa 14706205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 174
Target Start/End: Original strand, 17369316 - 17369352
Alignment:
Q  138 ttatgtcagtagataagctcaaatgagtcaatccaaa 174  Q
    ||||||||||||||||| |||||| ||||||||||||    
T  17369316 ttatgtcagtagataagttcaaataagtcaatccaaa 17369352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 137 - 173
Target Start/End: Complemental strand, 22209782 - 22209746
Alignment:
Q  137 cttatgtcagtagataagctcaaatgagtcaatccaa 173  Q
    |||||| |||||||||||||||||| |||||||||||    
T  22209782 cttatgccagtagataagctcaaataagtcaatccaa 22209746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 77
Target Start/End: Original strand, 32372613 - 32372677
Alignment:
Q  14 tttgtataagctataagctgtttccataagctatattggagaatttat-aaaaataagctgaaaa 77  Q
    |||||||| |||||||||||||| || ||| ||| ||||||||  ||| ||||||||||||||||    
T  32372613 tttgtatatgctataagctgttttcacaagttatcttggagaacatataaaaaataagctgaaaa 32372677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 66
Target Start/End: Original strand, 32942611 - 32942659
Alignment:
Q  18 tataagctataagctgtttccataagctatattggagaatttataaaaa 66  Q
    |||| |||||||||||||| |||||||||| |||||||| |||| ||||    
T  32942611 tatatgctataagctgttttcataagctatcttggagaacttatgaaaa 32942659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 98
Target Start/End: Original strand, 41016566 - 41016650
Alignment:
Q  14 tttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataa 98  Q
    |||||||||||||||||| |||| |||||||||| || ||||| ||   |||| |||||||| | || ||||||| || ||||||    
T  41016566 tttgtataagctataagccgttttcataagctatcttagagaactttggaaaacaagctgaagagagcttataaacatatcataa 41016650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 39 - 71
Target Start/End: Complemental strand, 42569507 - 42569475
Alignment:
Q  39 ataagctatattggagaatttataaaaataagc 71  Q
    ||||||||||||||||||||||| |||||||||    
T  42569507 ataagctatattggagaatttatgaaaataagc 42569475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 60; Significance: 1e-25; HSPs: 60)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 18 - 180
Target Start/End: Complemental strand, 17822942 - 17822780
Alignment:
Q  18 tataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataagctgatttaaaaagtgtt 116  Q
    |||| |||||||| ||||| |||||||||| |||||||| |||| |||||||||| |||| || |||| ||||||||||||||||| ||| | | ||  |    
T  17822942 tatatgctataagttgttttcataagctatcttggagaacttatgaaaataagctaaaaaaagcttatgaaaaatgtcataagctgttttcatatgttct 17822843  T
Q  117 cccaaatagtcttaacaaagcttatgtcagtagataagctcaaatgagtcaatccaaaaaggcc 180  Q
    || ||||||||| | || | ||||||||||||||||||||||||| ||| |||||||| |||||    
T  17822842 cctaaatagtctca-cagaacttatgtcagtagataagctcaaataagttaatccaaacaggcc 17822780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 14 - 181
Target Start/End: Complemental strand, 21731737 - 21731570
Alignment:
Q  14 tttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataagctgatttaaaaag 112  Q
    |||||||  |||||||| |||||  ||||||||||||||||||||||| ||| |||| |||||| ||||||| |||| ||| |||||||| ||| | |||    
T  21731737 tttgtatgtgctataagttgtttttataagctatattggagaatttatgaaagtaagttgaaaaaagtttatgaaaattgtgataagctgttttcataag 21731638  T
Q  113 tgttcccaaatagtcttaacaaagcttatgtcagtagataagctcaaatgagtcaatccaaaaaggccc 181  Q
    |  ||||||| | || | ||||| |||||||||||||||| |||||||| |  ||||||||| ||||||    
T  21731637 ttctcccaaacaatc-tcacaaaacttatgtcagtagatatgctcaaataaaccaatccaaacaggccc 21731570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 39 - 179
Target Start/End: Original strand, 29388628 - 29388768
Alignment:
Q  39 ataagctatattggagaatttataaaaataagctgaaaacagtttataaaaa-tgtcataagctgatttaaaaagtgttcccaaatagtcttaacaaagc 137  Q
    |||||||||| |||||||||||| |||||||| |||||| ||  |||||||| |||||||| ||| |||   ||||  ||||||| | |||| ||||| |    
T  29388628 ataagctatactggagaatttatgaaaataagttgaaaagagcatataaaaattgtcataaactgctttcgtaagttctcccaaacaatctt-acaaaac 29388726  T
Q  138 ttatgtcagtagataagctcaaatgagtcaatccaaaaaggc 179  Q
    |||||| |||||||||| |||||| |||||| ||||| ||||    
T  29388727 ttatgttagtagataaggtcaaataagtcaacccaaacaggc 29388768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 79
Target Start/End: Original strand, 51630104 - 51630165
Alignment:
Q  18 tataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaaca 79  Q
    ||||||||||||||| ||| |||||||||| ||| ||||||||| |||||||||||||||||    
T  51630104 tataagctataagctattttcataagctatcttgaagaatttatgaaaataagctgaaaaca 51630165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 4 - 180
Target Start/End: Complemental strand, 53294205 - 53294029
Alignment:
Q  4 ttaaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatg-tcataagctg 102  Q
    ||||||| | |||||||| |||||||| |||||  |||| ||||||| ||||| |||| |||| |||||||||| || || | ||||   ||||||  ||    
T  53294205 ttaaattgtttttgtatatgctataagttgtttttataaactatattagagaacttatgaaaacaagctgaaaatagcttttgaaaaccatcataatttg 53294106  T
Q  103 atttaaaaagtgttcccaaatagtcttaacaaagcttatgtcagtagataagctcaaatgagtcaatccaaaaaggcc 180  Q
     ||| |  ||| |||||||| ||||||| |||| || |||||||||||||||| ||||| |||||||||||| |||||    
T  53294105 ttttcatgagttttcccaaacagtctta-caaaactcatgtcagtagataagcacaaattagtcaatccaaacaggcc 53294029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 39 - 174
Target Start/End: Original strand, 2244065 - 2244200
Alignment:
Q  39 ataagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataagctgatttaaaaagtgttcccaaatagtcttaacaaagc 137  Q
    |||||||||||||||||| |||| |||||||| |||||| ||||||| || | |||||||||||| ||| |||| |  ||||||| ||| || | ||| |    
T  2244065 ataagctatattggagaacttatgaaaataaggtgaaaaaagtttatgaatattgtcataagctgtttttaaaaattctcccaaacagt-ttcaaaaaac 2244163  T
Q  138 ttatgtcagtagataagctcaaatgagtcaatccaaa 174  Q
    |||||||||||||||| |||  || | ||||||||||    
T  2244164 ttatgtcagtagataaactcggataaatcaatccaaa 2244200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 39 - 181
Target Start/End: Complemental strand, 25904279 - 25904137
Alignment:
Q  39 ataagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataagctgatttaaaaagtgttcccaaatagtcttaacaaagc 137  Q
    ||||||| | |||||||| |||||||||||||||||||| || |||| ||||||| ||||||||| ||| | |||   ||||||| |||| | |||||      
T  25904279 ataagctgttttggagaacttataaaaataagctgaaaaaagcttatgaaaaatggcataagctgttttcataagctctcccaaacagtc-tcacaaaat 25904181  T
Q  138 ttatgtcagtagataagctcaaatgagtcaatccaaaaaggccc 181  Q
    |||||||| | ||||||||||||| |||||| | ||| ||||||    
T  25904180 ttatgtcattggataagctcaaataagtcaaccaaaacaggccc 25904137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 25 - 179
Target Start/End: Original strand, 54426043 - 54426197
Alignment:
Q  25 tataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataagctgatttaaaaagtgttcccaaat 123  Q
    |||||| |||||  |||| ||||||||||||| |||| |||||||  |||||| || |||| |||| |||||||||||| |||   ||||  ||||||      
T  54426043 tataagttgtttttataatctatattggagaacttatgaaaataacttgaaaaaagcttatgaaaattgtcataagctgttttcctaagttctcccaagc 54426142  T
Q  124 agtcttaacaaagcttatgtcagtagataagctcaaatgagtcaatccaaaaaggc 179  Q
    |||| | ||||| |||||| |||||||||||||||||| || ||||||||| ||||    
T  54426143 agtc-tcacaaaacttatgccagtagataagctcaaataagccaatccaaacaggc 54426197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 102
Target Start/End: Original strand, 55302228 - 55302327
Alignment:
Q  4 ttaaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagttta-taaaaatgtcataagctg 102  Q
    ||||||||| ||||||||  ||||||||||||  |||||||||| ||||| || |||| ||||||||||||||| || |||  |||| ||||||||||||    
T  55302228 ttaaattatctttgtatatactataagctgttatcataagctatgttggaaaacttatgaaaataagctgaaaaaagcttacgaaaattgtcataagctg 55302327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 7694091 - 7694009
Alignment:
Q  14 tttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcat 96  Q
    ||||||||||||||||||||||| |||||| |||  |||||| |||||  ||||||||||||||||  |||| || |||||||    
T  7694091 tttgtataagctataagctgttttcataagttatcctggagagtttatggaaataagctgaaaacaacttatgaacatgtcat 7694009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 25 - 174
Target Start/End: Complemental strand, 52315267 - 52315118
Alignment:
Q  25 tataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataagctgatttaaaaagtgttcccaaat 123  Q
    |||||| |||||||||||||||| ||||| || |||| |||||||||||||| ||  |||| || ||||| ||||| || ||| | ||||  | |||||     
T  52315267 tataagttgtttccataagctattttggaaaacttatgaaaataagctgaaagcaacttatgaataatgtgataagttgttttgataagttcttccaaac 52315168  T
Q  124 agtcttaacaaagcttatgtcagtagataagctcaaatgagtcaatccaaa 174  Q
    | || | ||||| |||| |||||||||||| ||||||| ||||||||||||    
T  52315167 aatc-tcacaaaacttacgtcagtagataaactcaaataagtcaatccaaa 52315118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 174
Target Start/End: Original strand, 24169256 - 24169412
Alignment:
Q  18 tataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataagctgatttaaaaagtgtt 116  Q
    |||| |||||||  ||||| || ||||||| |||||||  |||| |||||||| |||||| |  |||| ||||||||||||||||  ||| ||||||  |    
T  24169256 tataggctataaaatgttttcacaagctatcttggagagcttatgaaaataagttgaaaaaatcttatgaaaaatgtcataagctatttttaaaagttct 24169355  T
Q  117 cccaaatagtcttaacaaagcttatgtcagtagataagctcaaatgagtcaatccaaa 174  Q
    | ||||||||| | ||||| |||||| |||||||||| ||| ||| || |||||||||    
T  24169356 ctcaaatagtc-tcacaaaacttatgccagtagataaactctaataagccaatccaaa 24169412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 102
Target Start/End: Original strand, 1407935 - 1408035
Alignment:
Q  4 ttaaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctg-aaaacagtttat-aaaaatgtcataagct 101  Q
    ||||||| | ||||| ||||||  ||||||||| |||||||||| | ||| ||||||| || |||||||| ||||||| |||| ||||||||||||||||    
T  1407935 ttaaattgtttttgtgtaagctgcaagctgttttcataagctatctaggaaaatttatgaagataagctgaaaaacagcttatgaaaaatgtcataagct 1408034  T
Q  102 g 102  Q
    |    
T  1408035 g 1408035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 84
Target Start/End: Original strand, 3155582 - 3155662
Alignment:
Q  4 ttaaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagttta 84  Q
    ||||||| | |||||| |||||| ||||||||| ||||| |||| ||| |||| | || ||||||||||||||||||||||    
T  3155582 ttaaattgtttttgtacaagctacaagctgttttcataaactatcttgaagaactaatgaaaataagctgaaaacagttta 3155662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 21 - 85
Target Start/End: Original strand, 40174559 - 40174623
Alignment:
Q  21 aagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat 85  Q
    |||||||||||||||| ||||||||| ||||||||| || | | |||||| ||||||||||||||    
T  40174559 aagctataagctgttttcataagctacattggagaacttgtgataataagttgaaaacagtttat 40174623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 50 - 161
Target Start/End: Complemental strand, 49939996 - 49939885
Alignment:
Q  50 tggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataagctgatttaaaaagtgttcccaaatagtcttaacaaagcttatgtcagta 148  Q
    ||||| |||||||| |||||||||||||||| |||| || |||||||||||||  ||| | ||||  | |||||||||| | ||||||||||||  ||||    
T  49939996 tggagcatttataataataagctgaaaacagcttatgaacaatgtcataagctcttttcataagttcttccaaatagtc-tcacaaagcttatgctagta 49939898  T
Q  149 gataagctcaaat 161  Q
    |||||||| ||||    
T  49939897 gataagcttaaat 49939885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 84
Target Start/End: Complemental strand, 1203194 - 1203127
Alignment:
Q  17 gtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagttta 84  Q
    |||||||||||||| ||| | |||||| ||| |||||||| |||| |||||||||| |||||||||||    
T  1203194 gtataagctataagttgtcttcataagttatcttggagaacttattaaaataagctaaaaacagttta 1203127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 77
Target Start/End: Complemental strand, 16200062 - 16199999
Alignment:
Q  14 tttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaa 77  Q
    |||||||| |||||||||||||| |||||||||| |||||| | |||| |||||||||| ||||    
T  16200062 tttgtatatgctataagctgttttcataagctatcttggaggacttatgaaaataagctaaaaa 16199999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 79
Target Start/End: Original strand, 17884047 - 17884122
Alignment:
Q  4 ttaaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaaca 79  Q
    ||||||| | |||||||||| ||| || ||||| ||||||||||||||||||  |||| ||||| |||||||||||    
T  17884047 ttaaattgtttttgtataagttatcagttgttttcataagctatattggagagcttatgaaaattagctgaaaaca 17884122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 174
Target Start/End: Complemental strand, 27043794 - 27043751
Alignment:
Q  131 acaaagcttatgtcagtagataagctcaaatgagtcaatccaaa 174  Q
    ||||| ||||||||||||||||||||||||| ||||||||||||    
T  27043794 acaaaacttatgtcagtagataagctcaaataagtcaatccaaa 27043751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 93
Target Start/End: Original strand, 35064844 - 35064923
Alignment:
Q  14 tttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgt 93  Q
    |||||||| |||||| ||||||| |||||| |||  |||||| |||||  |||||||||||||||| |||||||| ||||    
T  35064844 tttgtataggctatatgctgttttcataagatatcatggagagtttatggaaataagctgaaaacaatttataaacatgt 35064923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 183
Target Start/End: Complemental strand, 35571709 - 35571543
Alignment:
Q  17 gtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataagctgatttaaaaagtgt 115  Q
    |||||||||||||||||||| |||||||||| || ||||| || | |||||||| ||||| ||| | || || | ||| |||||||| ||| ||||||      
T  35571709 gtataagctataagctgttttcataagctatcttagagaacttgtgaaaataagttgaaaccagctcatgaacagtgtaataagctgtttttaaaagttc 35571610  T
Q  116 tcccaaatagtcttaacaaagcttatgtcagtagataagctcaaatgagtcaatccaaaaaggcccta 183  Q
    |||||||   ||   ||||| ||||||  ||||||||||||||||| || ||||||||| || |||||    
T  35571609 tcccaaactatc-ccacaaaacttatgctagtagataagctcaaataagccaatccaaacagacccta 35571543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 182
Target Start/End: Complemental strand, 42403987 - 42403936
Alignment:
Q  131 acaaagcttatgtcagtagataagctcaaatgagtcaatccaaaaaggccct 182  Q
    ||||| ||||||||||| ||||||||||||| |||||||||||| |||||||    
T  42403987 acaaaacttatgtcagttgataagctcaaataagtcaatccaaacaggccct 42403936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 91
Target Start/End: Complemental strand, 50681180 - 50681093
Alignment:
Q  4 ttaaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaat 91  Q
    ||||||| | |||||||| |||||||| |||||  |||||||||||||||||| |||| |||||||  |||||| || |||| |||||    
T  50681180 ttaaattgtttttgtatatgctataagttgtttatataagctatattggagaaattatgaaaataaattgaaaaaagcttatgaaaat 50681093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 180
Target Start/End: Complemental strand, 26920 - 26780
Alignment:
Q  39 ataagctatattggagaatttataaaaataagctgaaaacagtttataaaaat-gtcataagctgatttaaaaagtgttcccaaatagtcttaacaaagc 137  Q
    |||||||||||||||||| |||| ||||||| ||||||| || || | ||| | ||||||||||| ||| | || |  ||  ||| ||||| ||||||||    
T  26920 ataagctatattggagaacttatgaaaataatctgaaaa-agcttgtgaaatttgtcataagctgttttcataatttctcggaaacagtct-aacaaagc 26823  T
Q  138 ttatgtcagtagataagctcaaatgagtcaatccaaaaaggcc 180  Q
    ||||| |||| ||||||||||||| || ||||||||| |||||    
T  26822 ttatgccagttgataagctcaaataagccaatccaaacaggcc 26780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 99
Target Start/End: Complemental strand, 825552 - 825486
Alignment:
Q  33 gtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataag 99  Q
    |||| |||||||||| |||||||| |||| |||||||||||||||||||| || |  ||||||||||    
T  825552 gttttcataagctattttggagaacttatgaaaataagctgaaaacagttaatgagcatgtcataag 825486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 85
Target Start/End: Original strand, 6364143 - 6364209
Alignment:
Q  19 ataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat 85  Q
    |||||||||||||  ||| ||||||||||| ||||||| |||  |||||||||||||||||| ||||    
T  6364143 ataagctataagcaattttcataagctataatggagaacttacgaaaataagctgaaaacagcttat 6364209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 174
Target Start/End: Complemental strand, 13126630 - 13126497
Alignment:
Q  41 aagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataagctgatttaaaaagtgttcccaaatagtcttaacaaagctt 139  Q
    ||||||| || ||||| |||| ||||||||||||||| || |||| | ||||||||||||||| ||| | ||||  | ||||| |||| | ||||| |||    
T  13126630 aagctatcttcgagaacttatgaaaataagctgaaaaaagcttatgataaatgtcataagctgtttttataagttcttccaaacagtc-tcacaaaactt 13126532  T
Q  140 atgtcagtagataagctcaaatgagtcaatccaaa 174  Q
    |||| ||||| |||||| |||| || |||||||||    
T  13126531 atgttagtaggtaagctaaaataagccaatccaaa 13126497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 136 - 174
Target Start/End: Complemental strand, 32831477 - 32831439
Alignment:
Q  136 gcttatgtcagtagataagctcaaatgagtcaatccaaa 174  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  32831477 gcttatgtcagtagataagctcaaatgagccaatccaaa 32831439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 102
Target Start/End: Original strand, 38515849 - 38515908
Alignment:
Q  41 aagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagctg 102  Q
    ||||||| ||||| |||||||||||||||||||||||||| ||||   ||||||||||||||    
T  38515849 aagctattttggaaaatttataaaaataagctgaaaacagcttat--gaatgtcataagctg 38515908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 40 - 97
Target Start/End: Complemental strand, 10205965 - 10205908
Alignment:
Q  40 taagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcata 97  Q
    ||||||||  ||||||||| | |||||||||||||||||||||||| || ||||||||    
T  10205965 taagctatcctggagaattaacaaaaataagctgaaaacagtttatgaacatgtcata 10205908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 102
Target Start/End: Complemental strand, 30066844 - 30066759
Alignment:
Q  17 gtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagctg 102  Q
    |||||| || |||||||||  |||||||||| |||||||  ||||||||| ||||||||||||| |||| || || | ||||||||    
T  30066844 gtataaactgtaagctgttctcataagctatcttggagagcttataaaaacaagctgaaaacagattatgaacatattataagctg 30066759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 127
Target Start/End: Original strand, 45214365 - 45214473
Alignment:
Q  19 ataagctataagctgtttccataagctatattggagaattta-taaaaataagctgaaaacagtttataaaaatgtcataagctgatttaaaaagtgttc 117  Q
    ||||||||||||||||||| |||| |||| |||||||| ||| ||||||||||||||||| || || | ||  ||||||||| |||||| | ||||  ||    
T  45214365 ataagctataagctgtttc-ataaactatcttggagaacttaataaaaataagctgaaaatagattgtgaacgtgtcataagttgatttcataagttctc 45214463  T
Q  118 ccaaatagtc 127  Q
     |||||||||    
T  45214464 tcaaatagtc 45214473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 99
Target Start/End: Complemental strand, 50800106 - 50800026
Alignment:
Q  18 tataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataag 99  Q
    ||||||||||||||||||| | ||||||||  ||||||| || |  ||||||||||||||||| ||||| | ||||||||||    
T  50800106 tataagctataagctgttttcttaagctatcatggagaactt-tggaaataagctgaaaacagcttatagacatgtcataag 50800026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 14 - 102
Target Start/End: Complemental strand, 55414501 - 55414412
Alignment:
Q  14 tttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataagctg 102  Q
    |||| ||| |||||||  ||||| |||||| ||| |||||||| |||| |||||||| |||||| || |||| |||||||||||||||||    
T  55414501 tttgcatatgctataaattgttttcataagttatcttggagaacttatgaaaataagttgaaaaaagcttatgaaaaatgtcataagctg 55414412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 84
Target Start/End: Original strand, 679244 - 679311
Alignment:
Q  14 tttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagttta 84  Q
    ||||||||||||||||||||||| |||||| ||| ||   ||| |||| |||||||||| |||||||||||    
T  679244 tttgtataagctataagctgttttcataagttatctt---gaacttatgaaaataagctcaaaacagttta 679311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 68
Target Start/End: Original strand, 23503538 - 23503602
Alignment:
Q  4 ttaaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaata 68  Q
    ||||||||| |||||| |||  |||||||||||||||||||||| || || || |||||||||||    
T  23503538 ttaaattatttttgtagaagacataagctgtttccataagctatctttgaaaacttataaaaata 23503602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 91
Target Start/End: Complemental strand, 50662818 - 50662742
Alignment:
Q  15 ttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaat 91  Q
    ||||||| |||||||| |||||  |||||||||||||||||| || | |||||||| |||||| || |||| |||||    
T  50662818 ttgtatatgctataagttgtttatataagctatattggagaaattgtgaaaataagttgaaaaaagcttatgaaaat 50662742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 131 - 174
Target Start/End: Original strand, 8705047 - 8705090
Alignment:
Q  131 acaaagcttatgtcagtagataagctcaaatgagtcaatccaaa 174  Q
    ||||| ||||||||| |||||||||||||||||| |||||||||    
T  8705047 acaaaacttatgtcaatagataagctcaaatgagccaatccaaa 8705090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 131 - 174
Target Start/End: Complemental strand, 15173267 - 15173224
Alignment:
Q  131 acaaagcttatgtcagtagataagctcaaatgagtcaatccaaa 174  Q
    ||||| |||||||||||||||||| |||||| ||||||||||||    
T  15173267 acaaaacttatgtcagtagataagttcaaataagtcaatccaaa 15173224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 14 - 77
Target Start/End: Complemental strand, 19395197 - 19395134
Alignment:
Q  14 tttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaa 77  Q
    ||||||||||||||||  ||||| ||| |||||| |||||||||| ||  ||||||||||||||    
T  19395197 tttgtataagctataaaatgttttcattagctatcttggagaattgattgaaataagctgaaaa 19395134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 85
Target Start/End: Complemental strand, 28749984 - 28749917
Alignment:
Q  18 tataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat 85  Q
    |||||||||||| |||| |  ||||||||| ||||| ||||||| ||||| || ||||||||||||||    
T  28749984 tataagctataaactgtatgtataagctatcttggataatttatgaaaatgagttgaaaacagtttat 28749917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 16 - 99
Target Start/End: Original strand, 42121479 - 42121561
Alignment:
Q  16 tgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataag 99  Q
    ||||||||||||||| ||||| ||| |||||| |||||||| || |  |||||||||| |||||| |||| || ||||||||||    
T  42121479 tgtataagctataagttgttttcatgagctatcttggagaacttgtggaaataagctg-aaacagcttatgaacatgtcataag 42121561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 131 - 182
Target Start/End: Original strand, 44797986 - 44798037
Alignment:
Q  131 acaaagcttatgtcagtagataagctcaaatgagtcaatccaaaaaggccct 182  Q
    ||||| |||||||||||||||||||| |||| || ||||||||| |||||||    
T  44797986 acaaaacttatgtcagtagataagcttaaatcagccaatccaaacaggccct 44798037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 25 - 88
Target Start/End: Original strand, 47800623 - 47800686
Alignment:
Q  25 tataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaa 88  Q
    |||||||||||| |||||||||| ||| |||  |||| |||||||||||||||| | |||||||    
T  47800623 tataagctgttttcataagctatcttgaagagcttatgaaaataagctgaaaaccgcttataaa 47800686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 74
Target Start/End: Complemental strand, 437335 - 437265
Alignment:
Q  4 ttaaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctga 74  Q
    ||||||||| |||| ||  | ||| ||||||||  |||| |||||||||||||||||| ||||||||||||    
T  437335 ttaaattatttttgcatgtgttatgagctgtttttataaactatattggagaatttatgaaaataagctga 437265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 183
Target Start/End: Original strand, 25571371 - 25571417
Alignment:
Q  137 cttatgtcagtagataagctcaaatgagtcaatccaaaaaggcccta 183  Q
    ||||||||||||||||| ||||||| || ||||||||| ||||||||    
T  25571371 cttatgtcagtagataaactcaaataagccaatccaaacaggcccta 25571417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 32421098 - 32421148
Alignment:
Q  18 tataagctataagctgtttccataagctatattggagaatttataaaaata 68  Q
    |||||||||||||| ||||||||||||||| ||| |||| |||| ||||||    
T  32421098 tataagctataagcagtttccataagctattttgaagaacttatgaaaata 32421148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 102
Target Start/End: Complemental strand, 52746931 - 52746833
Alignment:
Q  4 ttaaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagctg 102  Q
    ||||||| | ||||| ||||| ||||||||||| |||||||||| ||| |    |||| ||||| |||||||||||| |||| || ||||| |||||||    
T  52746931 ttaaattgtttttgtgtaagccataagctgttttcataagctatcttgtaaggcttatgaaaatcagctgaaaacagcttatgaacatgtcttaagctg 52746833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 27 - 72
Target Start/End: Complemental strand, 942176 - 942131
Alignment:
Q  27 taagctgtttccataagctatattggagaatttataaaaataagct 72  Q
    |||||||||| ||||||||||  ||||||| |||||||||||||||    
T  942176 taagctgttttcataagctattatggagaacttataaaaataagct 942131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 79
Target Start/End: Complemental strand, 16494882 - 16494821
Alignment:
Q  18 tataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaaca 79  Q
    ||||||||||||| ||||| |||||||||| |||||||  || ||||| |||| ||||||||    
T  16494882 tataagctataagttgttttcataagctatcttggagagcttgtaaaactaagttgaaaaca 16494821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 20 - 77
Target Start/End: Original strand, 20031744 - 20031801
Alignment:
Q  20 taagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaa 77  Q
    |||||||||||| |||| |||||||||| || ||||| |||| ||||| |||||||||    
T  20031744 taagctataagcagttttcataagctattttagagaacttatgaaaatgagctgaaaa 20031801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 136 - 181
Target Start/End: Complemental strand, 22662210 - 22662165
Alignment:
Q  136 gcttatgtcagtagataagctcaaatgagtcaatccaaaaaggccc 181  Q
    |||||||| ||||||||| ||||||| |||||||||||| ||||||    
T  22662210 gcttatgttagtagataaactcaaataagtcaatccaaacaggccc 22662165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 136 - 181
Target Start/End: Complemental strand, 22666689 - 22666644
Alignment:
Q  136 gcttatgtcagtagataagctcaaatgagtcaatccaaaaaggccc 181  Q
    |||||||| ||||||||| ||||||| |||||||||||| ||||||    
T  22666689 gcttatgttagtagataaactcaaataagtcaatccaaacaggccc 22666644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 21 - 82
Target Start/End: Complemental strand, 29601082 - 29601021
Alignment:
Q  21 aagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtt 82  Q
    ||||||||| |||||| |||| |||||  | ||||| |||| ||||||||||||||||||||    
T  29601082 aagctataatctgttttcatatgctatcctagagaacttatgaaaataagctgaaaacagtt 29601021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 174
Target Start/End: Original strand, 23459621 - 23459776
Alignment:
Q  18 tataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagctgatttaaaaagtgttc 117  Q
    ||||||||||||||||||| ||||||  || ||| | || |||| || ||||| |||||| |  |||| || ||||||||||||  ||| | ||||  ||    
T  23459621 tataagctataagctgttttcataagagatcttgaaaaacttatgaatataagttgaaaataacttattaacatgtcataagcttttttcataagttctc 23459720  T
Q  118 ccaaatagtcttaacaaagcttatgtcagtagataagctcaaatgagtcaatccaaa 174  Q
    | ||| ||||||| || | ||||||  |||||||||||||||||  | |||||||||    
T  23459721 cgaaacagtcttaccata-cttatgctagtagataagctcaaatatgccaatccaaa 23459776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 77
Target Start/End: Original strand, 29912956 - 29913000
Alignment:
Q  33 gtttccataagctatattggagaatttataaaaataagctgaaaa 77  Q
    |||| |||||||||| ||||| || ||||||||||||||||||||    
T  29912956 gttttcataagctatcttggacaacttataaaaataagctgaaaa 29913000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 102
Target Start/End: Complemental strand, 30207648 - 30207564
Alignment:
Q  18 tataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagctg 102  Q
    ||||||||||||| ||||| |||||||||  || ||||  ||||  ||||||||||||||||| ||| | | |||||||| ||||    
T  30207648 tataagctataagttgttttcataagctaccttagagagattatggaaataagctgaaaacagcttacagacatgtcatatgctg 30207564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 49940069 - 49940025
Alignment:
Q  17 gtataagctataagctgtttccataagctatattggagaatttat 61  Q
    ||||||||||| |||||||| |||||||||| |||||| ||||||    
T  49940069 gtataagctattagctgttttcataagctatcttggagcatttat 49940025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 81
Target Start/End: Complemental strand, 50004210 - 50004158
Alignment:
Q  29 agctgtttccataagctatattggagaatttataaaaataagctgaaaacagt 81  Q
    |||||||| | |||| ||| |||||||| |||| |||||||||||||||||||    
T  50004210 agctgttttcctaagttatcttggagaacttatgaaaataagctgaaaacagt 50004158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 58; Significance: 2e-24; HSPs: 69)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 25 - 174
Target Start/End: Original strand, 6292493 - 6292641
Alignment:
Q  25 tataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagctgatttaaaaagtgttcccaaata 124  Q
    |||||||| ||| | ||| |||| |||||||  |||| |||||||||||||||||| |||| || ||||||||||||| |||||||| | | |||||| |    
T  6292493 tataagctattttcgtaaactattttggagagcttatgaaaataagctgaaaacagcttatgaacatgtcataagctgttttaaaaattct-cccaaaca 6292591  T
Q  125 gtcttaacaaagcttatgtcagtagataagctcaaatgagtcaatccaaa 174  Q
     ||| || |  |||||||||||||||||||||||||| ||||||||||||    
T  6292592 atctcaaaagtgcttatgtcagtagataagctcaaataagtcaatccaaa 6292641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 14 - 126
Target Start/End: Original strand, 34290225 - 34290337
Alignment:
Q  14 tttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagctgatttaaaaagt 113  Q
    ||||||||||||||||||||||| |||||||||| ||| |||| |||| |||||||||||||||||  |||| || ||||||||||||  ||||| || |    
T  34290225 tttgtataagctataagctgttttcataagctatcttgaagaacttatgaaaataagctgaaaacaacttatgaatatgtcataagcttttttaataaat 34290324  T
Q  114 gttcccaaatagt 126  Q
      |||||||||||    
T  34290325 tctcccaaatagt 34290337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 4 - 83
Target Start/End: Original strand, 7472290 - 7472369
Alignment:
Q  4 ttaaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagttt 83  Q
    ||||||| | ||||||||| |||||||||||||||||||||||| |||||||  |||| |||||||||||||||||||||    
T  7472290 ttaaattgtttttgtataatctataagctgtttccataagctatcttggagagcttatgaaaataagctgaaaacagttt 7472369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 14 - 85
Target Start/End: Original strand, 45975679 - 45975750
Alignment:
Q  14 tttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat 85  Q
    ||||||||||||| ||||||||| |||||||||| ||||||||||||| |||||||||||||||||| ||||    
T  45975679 tttgtataagctacaagctgttttcataagctatcttggagaatttatgaaaataagctgaaaacagcttat 45975750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 99
Target Start/End: Original strand, 10809324 - 10809419
Alignment:
Q  4 ttaaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataag 99  Q
    ||||| ||| ||||| ||||||||||| ||||  ||| ||||||||||||||| |||| |||||||||||||||||  ||||||| ||||||||||    
T  10809324 ttaaagtatttttgtgtaagctataagttgttctcatcagctatattggagaacttatgaaaataagctgaaaacatattataaacatgtcataag 10809419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 14 - 100
Target Start/End: Complemental strand, 7137079 - 7136993
Alignment:
Q  14 tttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagc 100  Q
    ||||||||| ||||||||||||| |||||||||| |||||||| |||| ||||||||||||||| |  |||| || |||||||||||    
T  7137079 tttgtataatctataagctgttttcataagctatcttggagaacttatgaaaataagctgaaaataacttatgaatatgtcataagc 7136993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 17 - 182
Target Start/End: Complemental strand, 10199486 - 10199321
Alignment:
Q  17 gtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagctgatttaaaaagtgtt 116  Q
    |||||| | ||||||| ||| |||||||||| || ||||  |||| |||||||||||||||||  |||| || ||||||||||||  ||| |  |||  |    
T  10199486 gtataatcgataagcttttttcataagctattttagagagcttatgaaaataagctgaaaacaacttatgaacatgtcataagctattttcatgagttct 10199387  T
Q  117 cccaaatagtcttaacaaagcttatgtcagtagataagctcaaatgagtcaatccaaaaaggccct 182  Q
    |||||||||| | |  |  |||||||| ||||||||||||||||| |||||||||||  |||||||    
T  10199386 cccaaatagtgtcacaagtgcttatgttagtagataagctcaaataagtcaatccaaccaggccct 10199321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 14 - 98
Target Start/End: Original strand, 10799451 - 10799535
Alignment:
Q  14 tttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataa 98  Q
    ||||| ||||||||||| ||||  ||| ||||| ||||||||| |||| |||||||||||||||||| ||||||| |||||||||    
T  10799451 tttgtgtaagctataagttgttctcatcagctacattggagaacttatgaaaataagctgaaaacagattataaacatgtcataa 10799535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 98
Target Start/End: Original strand, 4576784 - 4576878
Alignment:
Q  4 ttaaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataa 98  Q
    ||||| ||| |||||| ||| |||||||||||| |||||||||||||| | || |||| ||||||||||||| |||  ||||||| |||||||||    
T  4576784 ttaaaatatttttgtacaagttataagctgttttcataagctatattgaataacttatgaaaataagctgaacacaacttataaacatgtcataa 4576878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 101
Target Start/End: Complemental strand, 27820416 - 27820330
Alignment:
Q  16 tgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataagct 101  Q
    ||||||||||||| |||||||  ||||||||| ||||||||||||| ||||||||||||||| || |||| || |||||| ||||||    
T  27820416 tgtataagctatatgctgtttttataagctatcttggagaatttatgaaaataagctgaaaatagcttatgaacaatgtcgtaagct 27820330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 96
Target Start/End: Complemental strand, 37842431 - 37842354
Alignment:
Q  19 ataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcat 96  Q
    |||||||||||| ||||| |||||||||| ||| |||| ||||||||||||||||||||| | |||| || |||||||    
T  37842431 ataagctataagttgttttcataagctatcttgaagaacttataaaaataagctgaaaactgcttatgaacatgtcat 37842354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 14 - 174
Target Start/End: Original strand, 2777881 - 2778040
Alignment:
Q  14 tttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagctgatttaaaaagt 113  Q
    |||||||||||||||||||||||  ||||| ||  |||||||| |||| |||||||||||||||| | |||| || | |||||||| || ||| | ||||    
T  2777881 tttgtataagctataagctgttttaataagttaacttggagaacttatgaaaataagctgaaaacggcttatgaatacgtcataagttggtttcataagt 2777980  T
Q  114 gttcccaaatagtcttaacaaagcttatgtcagtagataagctcaaatgagtcaatccaaa 174  Q
      ||| ||| |||| | ||||| ||||||  | |||||||||| |||| || |||||||||    
T  2777981 tctcctaaacagtc-tcacaaaacttatgcaaatagataagctaaaataagccaatccaaa 2778040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 4 - 99
Target Start/End: Complemental strand, 24915142 - 24915046
Alignment:
Q  4 ttaaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataag 99  Q
    ||||||| | |||||||| |||||||||||||| |||||||| | |||||||| || | |||||||| |||||| || |||| ||||||||||||||    
T  24915142 ttaaattgtttttgtatatgctataagctgttttcataagctgtcttggagaacttgtgaaaataagttgaaaaaagcttatgaaaaatgtcataag 24915046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 14 - 102
Target Start/End: Original strand, 43332473 - 43332561
Alignment:
Q  14 tttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagctg 102  Q
    |||||||||| | |||||||||| |||||||||| ||| |||  |||| |||||||||||||||||| ||| ||| | |||||||||||    
T  43332473 tttgtataagttgtaagctgttttcataagctatcttgaagagcttattaaaataagctgaaaacaggttagaaacaggtcataagctg 43332561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 174
Target Start/End: Complemental strand, 3234106 - 3233936
Alignment:
Q  4 ttaaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataagctg 102  Q
    ||||||| | |||||||| |||||||| |||||  |||||||||||||||||| |||| ||||||||  ||||| |  |||| |||| ||| ||||| ||    
T  3234106 ttaaattgtttttgtatatgctataagttgtttttataagctatattggagaacttatgaaaataagtagaaaaaaacttatgaaaactgttataagttg 3234007  T
Q  103 atttaaaaagtgttcccaaatagtcttaacaaagcttatgtcagtagataagctcaaatgagtcaatccaaa 174  Q
     ||| | ||||  |||| || |||| | ||||| |||| | || ||||||||||||||| ||||||||||||    
T  3234006 ttttcataagttctccctaacagtc-tcacaaaacttacggcactagataagctcaaataagtcaatccaaa 3233936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 24 - 102
Target Start/End: Original strand, 6102153 - 6102232
Alignment:
Q  24 ctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataagctg 102  Q
    ||||||||||||| |||||||||| | |||||||||||  |||||||||||||||| ||||| || ||| ||||||||||    
T  6102153 ctataagctgttttcataagctatctgggagaatttatggaaataagctgaaaacaatttatgaacaatatcataagctg 6102232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 102
Target Start/End: Complemental strand, 17603475 - 17603376
Alignment:
Q  4 ttaaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataagctg 102  Q
    ||||||| | |||||||| |||||||| |||||  |||||||||||||||||| || | |||||||| || ||| ||||||| |||| ||||||||||||    
T  17603475 ttaaattgtttttgtatatgctataagttgtttttataagctatattggagaacttctgaaaataagttgtaaaaagtttatgaaaattgtcataagctg 17603376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 161
Target Start/End: Complemental strand, 31517817 - 31517674
Alignment:
Q  18 tataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagctgatttaaaaagtgttc 117  Q
    ||||||||||||||||| | ||||| || | |||||||  |||| |||||||||||||||||| |||| || ||||||| || || ||| | ||||  ||    
T  31517817 tataagctataagctgtcttcataatctgtcttggagagcttatgaaaataagctgaaaacagcttatgaacatgtcatgagttgttttgataagttctc 31517718  T
Q  118 ccaaatagtcttaacaaagcttatgtcagtagataagctcaaat 161  Q
    ||||| ||||| |  |  ||||||| ||||| ||||||||||||    
T  31517717 ccaaacagtctcacaagtgcttatgccagtaaataagctcaaat 31517674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 101
Target Start/End: Complemental strand, 41195274 - 41195187
Alignment:
Q  14 tttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagct 101  Q
    ||||||||  |||| | |||||| ||||| |||| |||||||| |||| ||||||||||||||| || |||| |||||||||||||||    
T  41195274 tttgtatatactatcaactgttttcataaactatcttggagaacttatgaaaataagctgaaaaaagcttattaaaatgtcataagct 41195187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 24 - 102
Target Start/End: Original strand, 10744300 - 10744378
Alignment:
Q  24 ctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagctg 102  Q
    ||||||||||||| |||||||| | || ||||| ||||||||||||| ||||||||| |||| || ||| |||||||||    
T  10744300 ctataagctgttttcataagctgtcttagagaacttataaaaataagatgaaaacagcttatgaacatgccataagctg 10744378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 99
Target Start/End: Original strand, 4622086 - 4622167
Alignment:
Q  18 tataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataag 99  Q
    |||||||||||||||||||||||| ||||| |||||||  || | |||||||||| ||||||| ||||  | ||||||||||    
T  4622086 tataagctataagctgtttccatatgctatcttggagagcttgtgaaaataagctaaaaacagcttatggacatgtcataag 4622167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 79
Target Start/End: Complemental strand, 14630043 - 14629982
Alignment:
Q  18 tataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaaca 79  Q
    ||||||||||||||| ||| |||||||||| ||||||| |||||  ||||||||||||||||    
T  14630043 tataagctataagctattttcataagctatcttggagactttatggaaataagctgaaaaca 14629982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 102
Target Start/End: Original strand, 42174844 - 42174933
Alignment:
Q  14 tttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataagctg 102  Q
    |||||||| |||||||| |||||  ||||| |||||||||||| |||| |||||||| | ||||||| |||| |||| ||||||||||||    
T  42174844 tttgtatatgctataagttgtttttataagttatattggagaacttatgaaaataagttaaaaacagcttatgaaaattgtcataagctg 42174933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 17 - 85
Target Start/End: Original strand, 17778949 - 17779017
Alignment:
Q  17 gtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat 85  Q
    ||||| ||||||||| |||| |||||||||| ||||||||||| |  ||||||| ||||||||||||||    
T  17778949 gtatatgctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttat 17779017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 17 - 77
Target Start/End: Complemental strand, 51695573 - 51695513
Alignment:
Q  17 gtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaa 77  Q
    ||||||| ||| || ||||| |||||||||| ||||||||||||| |||||||||||||||    
T  51695573 gtataagttatcagatgttttcataagctatcttggagaatttatgaaaataagctgaaaa 51695513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 100
Target Start/End: Complemental strand, 5887064 - 5886989
Alignment:
Q  25 tataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagc 100  Q
    ||||||||||||| |||||| || |||||||| |||  |||||||||||||||||  |||| || |||||||||||    
T  5887064 tataagctgtttctataagccatcttggagaacttacgaaaataagctgaaaacaacttatgaacatgtcataagc 5886989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 180
Target Start/End: Original strand, 2295110 - 2295251
Alignment:
Q  39 ataagctatattggagaatttataaaaataagctgaaaacagtttataaaaat-gtcataagctgatttaaaaagtgttcccaaatagtcttaacaaagc 137  Q
    |||||||||||  ||||| || | |||||||| |||| | || |||| ||||| ||||||||||| ||| | ||||  ||||||| ||||| | |||| |    
T  2295110 ataagctatatcagagaacttgtgaaaataagttgaatagagcttatgaaaattgtcataagctgttttcataagttctcccaaacagtctca-caaaac 2295208  T
Q  138 ttatgtcagtagataagctcaaatgagtcaatccaaaaaggcc 180  Q
    ||||| |||||||||||||||||| || |||| |||| |||||    
T  2295209 ttatgccagtagataagctcaaataagccaattcaaacaggcc 2295251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 102
Target Start/End: Original strand, 35925697 - 35925767
Alignment:
Q  32 tgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagctg 102  Q
    ||||||||||||||||  |||||| |||||  ||||||| ||||||||| |||| || |||||||||||||    
T  35925697 tgtttccataagctatcatggagagtttatggaaataagttgaaaacagcttatgaacatgtcataagctg 35925767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 85
Target Start/End: Original strand, 2294890 - 2294971
Alignment:
Q  4 ttaaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat 85  Q
    ||||||| | |||| |||||||||||||| ||| ||||| |||| |||||||| |||  |||||||| ||||||||| ||||    
T  2294890 ttaaattgtttttggataagctataagctattttcataaactatcttggagaacttacgaaaataaggtgaaaacagcttat 2294971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 32113652 - 32113713
Alignment:
Q  19 ataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacag 80  Q
    |||| |||||| |||||| |||||| ||| ||||||| ||||| ||||||||||||||||||    
T  32113652 ataacctataaactgttttcataagttatgttggagattttatgaaaataagctgaaaacag 32113713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 35179134 - 35179199
Alignment:
Q  20 taagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat 85  Q
    |||| |||||||||||| |||||| |||  ||||||| |||| |||||||||||||||||| ||||    
T  35179134 taagttataagctgttttcataagttattatggagaacttatgaaaataagctgaaaacagcttat 35179199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 98
Target Start/End: Complemental strand, 27970386 - 27970290
Alignment:
Q  4 ttaaattatatttgtataagctataagctgtttccataagcta-tattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataa 98  Q
    ||||||| | |||||||| |||||||| ||||||||||| ||| | |||| ||| |||| ||||||| ||||||| || |||| |||||||||||||    
T  27970386 ttaaattgtttttgtatatgctataagttgtttccataaactatttttggggaacttatgaaaataaactgaaaaaagcttatgaaaaatgtcataa 27970290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 85
Target Start/End: Complemental strand, 6231893 - 6231826
Alignment:
Q  18 tataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat 85  Q
    ||||| ||||||||||||| | |||||||   || |||| ||||| ||||||||||||||||||||||    
T  6231893 tataatctataagctgttttcgtaagctaacctgaagaacttatagaaataagctgaaaacagtttat 6231826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 140 - 183
Target Start/End: Complemental strand, 24460356 - 24460313
Alignment:
Q  140 atgtcagtagataagctcaaatgagtcaatccaaaaaggcccta 183  Q
    ||||||||||||||| |||||| |||||||||||| ||||||||    
T  24460356 atgtcagtagataagttcaaataagtcaatccaaacaggcccta 24460313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 101
Target Start/End: Complemental strand, 27887195 - 27887112
Alignment:
Q  18 tataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagct 101  Q
    ||||||||||||| ||||| ||||| ||||  ||||||   |||||||||||||| |||||| |||||  | ||||||||||||    
T  27887195 tataagctataagttgttttcataaactatcatggagagcatataaaaataagctaaaaacaatttatggacatgtcataagct 27887112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 38 - 168
Target Start/End: Complemental strand, 37593741 - 37593611
Alignment:
Q  38 cataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagctgatttaaaaagtgttcccaaatagtcttaacaa-ag 136  Q
    |||||||||| ||| |||  |||| |||||||||||||||||| |||| || |||||||||| ||  || |  ||| |||||||| |||| ||||||  |    
T  37593741 cataagctattttgaagagcttatgaaaataagctgaaaacagcttatgaacatgtcataagttgtgttcattagttttcccaaacagtc-taacaagtg 37593643  T
Q  137 cttatgtcagtagataagctcaaatgagtcaa 168  Q
     ||||| ||||| |||||||||||| ||||||    
T  37593642 tttatgccagtatataagctcaaataagtcaa 37593611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 101
Target Start/End: Complemental strand, 40943303 - 40943221
Alignment:
Q  18 tataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagct 101  Q
    ||||| ||||||||||| || ||||||||| |||||||  || || ||||||| |||||||||||||| || |||| |||||||    
T  40943303 tataacctataagctgtatc-ataagctattttggagagcttgtagaaataagttgaaaacagtttatgaacatgttataagct 40943221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 79
Target Start/End: Complemental strand, 1232959 - 1232921
Alignment:
Q  41 aagctatattggagaatttataaaaataagctgaaaaca 79  Q
    ||||||| ||||||||||||| |||||||||||||||||    
T  1232959 aagctatcttggagaatttatgaaaataagctgaaaaca 1232921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 102
Target Start/End: Complemental strand, 1565626 - 1565528
Alignment:
Q  4 ttaaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagctg 102  Q
    ||||||| | |||||||||  | |||||||||| | ||| |||| |||||||  | || |||||||||||||||||| ||||  | |||||||||||||    
T  1565626 ttaaattgtttttgtataaagtgtaagctgttttcttaatctattttggagagctcatgaaaataagctgaaaacagcttatgcacatgtcataagctg 1565528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 182
Target Start/End: Original strand, 2295283 - 2295348
Alignment:
Q  116 tcccaaatagtcttaacaaagcttatgtcagtagataagctcaaatgagtcaatccaaaaaggccct 182  Q
    ||||||||||||| |  ||| |||| |||||||||||||||||||| || ||||||||| |||||||    
T  2295283 tcccaaatagtctcagaaaa-cttaagtcagtagataagctcaaataagccaatccaaacaggccct 2295348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 80
Target Start/End: Complemental strand, 7218151 - 7218089
Alignment:
Q  18 tataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacag 80  Q
    ||||||||||||| ||||| ||||| ||||  ||||||| |||| |||||||| |||||||||    
T  7218151 tataagctataagttgttttcataacctatcctggagaacttatgaaaataagttgaaaacag 7218089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 79
Target Start/End: Original strand, 14443449 - 14443503
Alignment:
Q  25 tataagctgtttccataagctatattggagaatttataaaaataagctgaaaaca 79  Q
    |||||| |||||  |||||||| |||||||||||||| |||||||| ||||||||    
T  14443449 tataaggtgtttttataagctacattggagaatttatgaaaataaggtgaaaaca 14443503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 117 - 187
Target Start/End: Original strand, 15784410 - 15784479
Alignment:
Q  117 cccaaatagtcttaacaaagcttatgtcagtagataagctcaaatgagtcaatccaaaaaggccctaggtc 187  Q
    |||||| ||||||| |||| ||||||| ||||||||||||||||| |||| ||||||  ||||||| ||||    
T  15784410 cccaaacagtctta-caaaacttatgttagtagataagctcaaataagtcgatccaattaggcccttggtc 15784479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 184
Target Start/End: Original strand, 27976642 - 27976760
Alignment:
Q  63 aaaataagctgaaaacagtttat-aaaaatgtcataagctgatttaaaaagtgttcccaaatagtcttaacaaagcttatgtcagtagataagctcaaat 161  Q
    ||||||||||||||| || |||| ||||||||||||||||  ||| |||||| || ||||| |||| ||||||| |||||||||||  || |||||||||    
T  27976642 aaaataagctgaaaaaagcttatgaaaaatgtcataagctattttcaaaagt-tttccaaacagtc-taacaaaacttatgtcagt-tat-agctcaaat 27976737  T
Q  162 gagtcaatccaaaaaggccctag 184  Q
     || ||||||||| | |||||||    
T  27976738 aagccaatccaaacaagccctag 27976760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 76
Target Start/End: Original strand, 39596586 - 39596648
Alignment:
Q  14 tttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaa 76  Q
    ||||||||||||||||| || ||  ||||||||| |||||||  ||||||||||||| |||||    
T  39596586 tttgtataagctataagatggttttataagctatcttggagagcttataaaaataagttgaaa 39596648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 183
Target Start/End: Original strand, 41505786 - 41505832
Alignment:
Q  137 cttatgtcagtagataagctcaaatgagtcaatccaaaaaggcccta 183  Q
    ||||||||||||||||||||||||| || ||||||||| | ||||||    
T  41505786 cttatgtcagtagataagctcaaataagccaatccaaacaagcccta 41505832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 174
Target Start/End: Complemental strand, 51929421 - 51929383
Alignment:
Q  136 gcttatgtcagtagataagctcaaatgagtcaatccaaa 174  Q
    |||||||||||||||||||||||||  ||||||||||||    
T  51929421 gcttatgtcagtagataagctcaaaaaagtcaatccaaa 51929383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 5090856 - 5090917
Alignment:
Q  19 ataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacag 80  Q
    |||||||||||||||||| ||||| |||||   ||||  |||| ||||||||||||||||||    
T  5090856 ataagctataagctgttttcataaactatacccgagatcttatgaaaataagctgaaaacag 5090917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 26 - 174
Target Start/End: Original strand, 5741607 - 5741755
Alignment:
Q  26 ataagctgtttccataagctatattggagaatttataaaaataagctgaaaaca-gtttataaaaatgtcataagctgatttaaaaagtgttcccaaata 124  Q
    ||||||| |||  |||||||||||| ||||| |||| ||||| ||||||||| |   |||| ||| ||||||||| || ||| | ||||  ||||||| |    
T  5741607 ataagctatttttataagctatattagagaacttatgaaaatcagctgaaaaaatacttatgaaattgtcataagttgttttcataagttctcccaaaca 5741706  T
Q  125 gtcttaacaaagcttatgtcagtagataagctcaaatgagtcaatccaaa 174  Q
    || | |||||| ||||||  ||||| ||||||||||| || |||||||||    
T  5741707 gt-tcaacaaaacttatgcaagtagttaagctcaaataagccaatccaaa 5741755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 85
Target Start/End: Original strand, 9656629 - 9656710
Alignment:
Q  4 ttaaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat 85  Q
    ||||||||| ||  ||||||||||||||||| | ||||||||||  ||||  | |||| |||||||||| ||||||| ||||    
T  9656629 ttaaattattttcatataagctataagctgtgttcataagctatcctggatgaattatgaaaataagctcaaaacagcttat 9656710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 14 - 99
Target Start/End: Complemental strand, 12287273 - 12287188
Alignment:
Q  14 tttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataag 99  Q
    |||||||| |||||||| ||||| | |||||||| ||   ||| ||| ||||||||||||||||||  |||| |||||| ||||||    
T  12287273 tttgtatatgctataagttgttttcttaagctatcttatggaacttacaaaaataagctgaaaacaacttatgaaaatgccataag 12287188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 14 - 79
Target Start/End: Original strand, 15558206 - 15558271
Alignment:
Q  14 tttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaaca 79  Q
    |||||| ||| |||||||||||| |||||| |||  | ||||| ||||| ||||||||||||||||    
T  15558206 tttgtaaaagttataagctgttttcataagatatcctagagaacttatagaaataagctgaaaaca 15558271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 99
Target Start/End: Complemental strand, 28482310 - 28482229
Alignment:
Q  18 tataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataag 99  Q
    |||||||||||||||||||  ||||| ||| |||||||  |||  |||||||||| |||| ||||||| || || |||||||    
T  28482310 tataagctataagctgtttttataagttatcttggagagcttacgaaaataagctaaaaatagtttatgaatatatcataag 28482229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 53 - 102
Target Start/End: Complemental strand, 30815695 - 30815646
Alignment:
Q  53 agaatttataaaaataagctgaaaacagtttataaaaatgtcataagctg 102  Q
    |||| |||| ||||||||||||||||| ||||| || |||||||||||||    
T  30815695 agaacttatgaaaataagctgaaaacattttatgaacatgtcataagctg 30815646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 40 - 77
Target Start/End: Complemental strand, 37631614 - 37631577
Alignment:
Q  40 taagctatattggagaatttataaaaataagctgaaaa 77  Q
    ||||||||||||||||| |||| |||||||||||||||    
T  37631614 taagctatattggagaacttatgaaaataagctgaaaa 37631577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 77
Target Start/End: Complemental strand, 38018455 - 38018382
Alignment:
Q  4 ttaaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaa 77  Q
    ||||||| | || |||||||||| ||||||||| ||||   ||| |||||||||| || |||||||||||||||    
T  38018455 ttaaattgttttcgtataagctagaagctgttttcatacattatcttggagaattcatgaaaataagctgaaaa 38018382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 77
Target Start/End: Original strand, 47432075 - 47432147
Alignment:
Q  4 ttaaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaa 77  Q
    ||||||| | |||| ||| |||||||| |||||  ||||| ||||||| ||||||||| |||||||||||||||    
T  47432075 ttaaattgtttttgaatatgctataaggtgtttt-ataagttatattgaagaatttatgaaaataagctgaaaa 47432147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 14 - 102
Target Start/End: Original strand, 49938736 - 49938825
Alignment:
Q  14 tttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacag-tttataaaaatgtcataagctg 102  Q
    |||||||| | |||||| |||||  |||||||||||| ||||| |||| |||||||| |||||| || |||  |||| ||||||||||||    
T  49938736 tttgtatatgttataagttgtttttataagctatattagagaacttatgaaaataagttgaaaaaagcttttgaaaattgtcataagctg 49938825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 99
Target Start/End: Complemental strand, 3070154 - 3070086
Alignment:
Q  32 tgtttccataagctatattggagaatttataaaaat-aagctgaaaacagtttataaaaatgtcataag 99  Q
    ||||| |||||||||| | |||||| |||||| ||| ||||||||||||| |||| || ||||||||||    
T  3070154 tgttttcataagctatttgggagaacttataataattaagctgaaaacagcttatgaacatgtcataag 3070086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 39 - 174
Target Start/End: Original strand, 5720939 - 5721074
Alignment:
Q  39 ataagctatattggagaatttataaaaataagctgaaaacagt-ttataaaaatgtcataagctgatttaaaaagtgttcccaaatagtcttaacaaagc 137  Q
    |||||||||||| |||||  ||| ||||| ||||||||| |   |||| ||| |||||||||||| ||| | ||||  ||||||| ||||  |||||| |    
T  5720939 ataagctatattagagaacatatgaaaatcagctgaaaaaatacttatgaaattgtcataagctgttttcataagttctcccaaacagtcc-aacaaaac 5721037  T
Q  138 ttatgtcagtagataagctcaaatgagtcaatccaaa 174  Q
    |||||  ||||| ||||||||||| || |||||||||    
T  5721038 ttatgcaagtagttaagctcaaataagccaatccaaa 5721074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 98
Target Start/End: Complemental strand, 18420931 - 18420851
Alignment:
Q  18 tataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataa 98  Q
    ||||||||||| ||| ||| || ||| ||| |||||||  ||| ||||||||| ||| |||| |||||||| |||||||||    
T  18420931 tataagctatatgctattttcacaagttatcttggagagcttacaaaaataagttgagaacactttataaacatgtcataa 18420851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 174
Target Start/End: Complemental strand, 29793655 - 29793619
Alignment:
Q  138 ttatgtcagtagataagctcaaatgagtcaatccaaa 174  Q
    |||||||||||||||||||||||| ||||||| ||||    
T  29793655 ttatgtcagtagataagctcaaataagtcaatacaaa 29793619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 98
Target Start/End: Original strand, 30257676 - 30257756
Alignment:
Q  18 tataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataa 98  Q
    |||||||| |||| ||||| ||||| ||||  |||||   ||||| ||||||||||||||||| |||| || |||||||||    
T  30257676 tataagctttaagttgttttcataaactatcctggagggcttatagaaataagctgaaaacagcttatgaacatgtcataa 30257756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 131 - 175
Target Start/End: Complemental strand, 38116041 - 38115997
Alignment:
Q  131 acaaagcttatgtcagtagataagctcaaatgagtcaatccaaaa 175  Q
    ||||| |||| |||||||||||||||||||| |||||||| ||||    
T  38116041 acaaaacttacgtcagtagataagctcaaataagtcaatctaaaa 38115997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 79
Target Start/End: Original strand, 38578506 - 38578582
Alignment:
Q  4 ttaaattatatttgtataagctataagctgtttccataagctatattggagaatttat-aaaaataagctgaaaaca 79  Q
    ||||||||| ||||||||||||||||| ||||| ||||| ||||   | ||| ||||| ||||||||||| ||||||    
T  38578506 ttaaattatttttgtataagctataagttgtttacataaactattgagaagagtttatgaaaaataagctcaaaaca 38578582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 39 - 79
Target Start/End: Complemental strand, 43722384 - 43722344
Alignment:
Q  39 ataagctatattggagaatttataaaaataagctgaaaaca 79  Q
    |||||||||||| ||||  ||||||||||||||||||||||    
T  43722384 ataagctatatttgagagcttataaaaataagctgaaaaca 43722344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 102
Target Start/End: Complemental strand, 45999317 - 45999281
Alignment:
Q  66 ataagctgaaaacagtttataaaaatgtcataagctg 102  Q
    |||||||||||||||||||| || |||||||||||||    
T  45999317 ataagctgaaaacagtttatgaacatgtcataagctg 45999281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 77
Target Start/End: Original strand, 49888759 - 49888819
Alignment:
Q  17 gtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaa 77  Q
    ||||||||||| || ||||| |||||||||| || ||||| |||| ||||||||| |||||    
T  49888759 gtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaa 49888819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 102
Target Start/End: Complemental strand, 51929607 - 51929531
Alignment:
Q  27 taagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataagctg 102  Q
    ||||||||||  |||| ||||||||||||| ||||  ||||||| |||||| || |||| |||| ||||||||||||    
T  51929607 taagctgtttttataaactatattggagaacttatggaaataagttgaaaaaagcttatgaaaattgtcataagctg 51929531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 54; Significance: 4e-22; HSPs: 64)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 680495 - 680580
Alignment:
Q  17 gtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagctg 102  Q
    |||||||||||||||| ||| |||||||||| ||| |||| || | |||||||||||||||||||||||||| |||||||||||||    
T  680495 gtataagctataagctattttcataagctatcttgaagaacttgtgaaaataagctgaaaacagtttataaacatgtcataagctg 680580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 156
Target Start/End: Original strand, 18066121 - 18066259
Alignment:
Q  18 tataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataagctgatttaaaaagtgtt 116  Q
    ||||||||||||||||||| |||||||||| |||||||| |||  |||||||| |||||| || |||| |  |||||||||||||| ||| | ||||  |    
T  18066121 tataagctataagctgttttcataagctatcttggagaacttaagaaaataaggtgaaaatagcttatgagcaatgtcataagctgttttcataagttgt 18066220  T
Q  117 cccaaatagtcttaacaaagcttatgtcagtagataagct 156  Q
     | ||| ||| || ||||| ||||||||||||||||||||    
T  18066221 acaaaacagt-ttcacaaaacttatgtcagtagataagct 18066259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 14 - 174
Target Start/End: Complemental strand, 33319893 - 33319737
Alignment:
Q  14 tttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagctgattta-aaaag 112  Q
    ||||||||  |||||| |||||| ||||| |||| |||||||| |||| ||||||||||||||| || ||||  |||||||||||||| ||||| |||||    
T  33319893 tttgtatatactataaactgttttcataaactatcttggagaacttatgaaaataagctgaaaaaagcttat-taaatgtcataagct-atttataaaag 33319796  T
Q  113 tgttcccaaatagtcttaacaaagcttatgtcagtagataagctcaaatgagtcaatccaaa 174  Q
    |  ||||||| |||||   || | |||||| ||||||| |||||||||| || |||||||||    
T  33319795 ttctcccaaacagtct---cacaacttatgccagtagacaagctcaaataagccaatccaaa 33319737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 161
Target Start/End: Original strand, 1625879 - 1626036
Alignment:
Q  4 ttaaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataagctg 102  Q
    ||||||| | || ||||||| |||||| ||||| |||||||||| |||||||| |||  ||||| |||||||||||  |||| || | |||||||||||     
T  1625879 ttaaattgttttcgtataagttataagttgttttcataagctatcttggagaacttacgaaaatcagctgaaaacatcttatgaacattgtcataagcta 1625978  T
Q  103 atttaaaaagtgttcccaaatagtcttaacaaagcttatgtcagtagataagctcaaat 161  Q
     ||| | ||||  || ||||||||||| ||||| ||||||||||  |||||||||||||    
T  1625979 ctttcataagttctctcaaatagtctt-acaaaacttatgtcaggggataagctcaaat 1626036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 38 - 182
Target Start/End: Original strand, 4606938 - 4607082
Alignment:
Q  38 cataagctatattggagaatttataaaaataagctgaaaacagtttataaa-aatgtcataagctgatttaaaaagtgttcccaaatagtcttaacaaag 136  Q
    |||||||||| |||||||| |||| |||||||||| ||| ||| | || || ||||||||||| || ||| | ||||  ||||||||||||| | ||||     
T  4606938 cataagctatcttggagaacttatgaaaataagctaaaagcagctcatgaacaatgtcataagttgttttcacaagttctcccaaatagtctca-caaaa 4607036  T
Q  137 cttatgtcagtagataagctcaaatgagtcaatccaaaaaggccct 182  Q
    ||||| |  |||||||||||||||| || ||||||||| |||||||    
T  4607037 cttatattggtagataagctcaaataagccaatccaaacaggccct 4607082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 174
Target Start/End: Original strand, 20952348 - 20952504
Alignment:
Q  18 tataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataagctgatttaaaaagtgtt 116  Q
    |||| |||||||| |||||  || ||||||||||||||| |||| |||||||| |||||| |||| || |||| || ||||| ||| ||| | ||||  |    
T  20952348 tatatgctataagttgtttttattagctatattggagaacttatgaaaataagttgaaaaaagttaatgaaaattggcataaactgttttcataagttct 20952447  T
Q  117 cccaaatagtcttaacaaagcttatgtcagtagataagctcaaatgagtcaatccaaa 174  Q
    |  |||||||| ||||||| ||| || ||||| |||||||||||| ||||||||||||    
T  20952448 cttaaatagtc-taacaaaacttttgccagtatataagctcaaataagtcaatccaaa 20952504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 85
Target Start/End: Complemental strand, 29628824 - 29628753
Alignment:
Q  14 tttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat 85  Q
    ||||||||||||||||| ||||  |||||||||| ||||| |||||||  |||||||||||||||| |||||    
T  29628824 tttgtataagctataagttgttctcataagctatcttggaaaatttatggaaataagctgaaaacaatttat 29628753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 85
Target Start/End: Original strand, 40279268 - 40279327
Alignment:
Q  26 ataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat 85  Q
    ||||| ||||| ||||||||||||||||||| |||| ||||| |||||||||||||||||    
T  40279268 ataagttgttttcataagctatattggagaacttatgaaaattagctgaaaacagtttat 40279327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 85
Target Start/End: Original strand, 40279338 - 40279397
Alignment:
Q  26 ataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat 85  Q
    ||||| ||||| ||||||||||||||||||| |||| ||||| |||||||||||||||||    
T  40279338 ataagttgttttcataagctatattggagaacttatgaaaattagctgaaaacagtttat 40279397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 85
Target Start/End: Original strand, 40279408 - 40279467
Alignment:
Q  26 ataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat 85  Q
    ||||| ||||| ||||||||||||||||||| |||| |||||||| ||||||||||||||    
T  40279408 ataagttgttttcataagctatattggagaacttatgaaaataagttgaaaacagtttat 40279467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 86 - 180
Target Start/End: Original strand, 42419855 - 42419948
Alignment:
Q  86 aaaaatgtcataagctgatttaaaaagtgttcccaaatagtcttaacaaagcttatgtcagtagataagctcaaatgagtcaatccaaaaaggcc 180  Q
    ||||||||||||||||| |||   ||||  ||||||| ||||| || ||| |||||||||| |||||| ||||||| ||||||||||||||||||    
T  42419855 aaaaatgtcataagctgttttcgtaagttctcccaaacagtctcaaaaaa-cttatgtcagaagataaactcaaataagtcaatccaaaaaggcc 42419948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 131 - 184
Target Start/End: Complemental strand, 10619184 - 10619131
Alignment:
Q  131 acaaagcttatgtcagtagataagctcaaatgagtcaatccaaaaaggccctag 184  Q
    ||||| ||| ||||||||||||| |||||||||||||||||||| |||||||||    
T  10619184 acaaaacttgtgtcagtagataaactcaaatgagtcaatccaaacaggccctag 10619131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 77
Target Start/End: Complemental strand, 12464564 - 12464491
Alignment:
Q  4 ttaaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaa 77  Q
    ||||||| | |||||||| |||||||||| ||| |||||||||| |||||||| || | |||||||||||||||    
T  12464564 ttaaattgtttttgtatatgctataagctattttcataagctatcttggagaacttgtgaaaataagctgaaaa 12464491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 106
Target Start/End: Complemental strand, 33931651 - 33931559
Alignment:
Q  14 tttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagctgattt 106  Q
    ||||||||||||||||||||||| |||||||||| |||||||| |  |  |||||||||||||  |  |||| || |||||||||| ||||||    
T  33931651 tttgtataagctataagctgttttcataagctattttggagaaatagtggaaataagctgaaataaacttatgaacatgtcataagttgattt 33931559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 99
Target Start/End: Original strand, 41851514 - 41851610
Alignment:
Q  4 ttaaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataag 99  Q
    ||||||| | |||||||| |||||||| ||||| || ||||||| ||||||||||||| ||| |||||||| || || |||| |||| |||||||||    
T  41851514 ttaaattgtttttgtatatgctataagttgttttcagaagctatcttggagaatttatgaaattaagctgagaaaagcttatgaaaagtgtcataag 41851610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 26372686 - 26372639
Alignment:
Q  136 gcttatgtcagtagataagctcaaatgagtcaatccaaaaaggcccta 183  Q
    ||||||||||| ||||||||||||||||||||||||||| || |||||    
T  26372686 gcttatgtcagaagataagctcaaatgagtcaatccaaagagacccta 26372639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 29316851 - 29316768
Alignment:
Q  19 ataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagctg 102  Q
    |||| ||||||||||||| ||| |||||| |||||||| ||||  |||||||||||||| |  |||| || |||||||||||||    
T  29316851 ataatctataagctgttttcatcagctatcttggagaacttatggaaataagctgaaaagaacttatgaacatgtcataagctg 29316768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 86 - 173
Target Start/End: Complemental strand, 31561750 - 31561664
Alignment:
Q  86 aaaaatgtcataagctgatttaaaaagtgttcccaaatagtcttaacaaagcttatgtcagtagataagctcaaatgagtcaatccaa 173  Q
    ||||| |||||| |||| ||| |||||| |||||||| ||| ||| |||| ||||||| ||||||||| ||||||| |||||||||||    
T  31561750 aaaaacgtcatatgctgttttcaaaagttttcccaaacagtttta-caaaacttatgttagtagataatctcaaataagtcaatccaa 31561664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 101
Target Start/End: Original strand, 750663 - 750747
Alignment:
Q  17 gtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataagct 101  Q
    ||||||||||| |||||||| |||||||||| |||||||| ||||  ||||||||| ||||||| |||| || |||||||| ||||    
T  750663 gtataagctatgagctgttt-cataagctatcttggagaacttatgcaaataagctcaaaacagcttatgaacaatgtcattagct 750747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 8 - 80
Target Start/End: Original strand, 2142636 - 2142709
Alignment:
Q  8 attatatttgtataagctataagctgtttccataagctatatt-ggagaatttataaaaataagctgaaaacag 80  Q
    ||||| ||||||||||||||||| ||||| |||||  ||| || ||||||||||| |||||||||| |||||||    
T  2142636 attatttttgtataagctataagttgttttcataatttatcttgggagaatttatgaaaataagctaaaaacag 2142709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 99
Target Start/End: Original strand, 3611232 - 3611301
Alignment:
Q  31 ctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataag 99  Q
    |||||| || ||||||| |||||||| |||| |||||||||| |||||||||||| || |||||||||||    
T  3611232 ctgttttcacaagctatcttggagaacttatgaaaataagctaaaaacagtttatgaataatgtcataag 3611301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 49 - 102
Target Start/End: Complemental strand, 5902595 - 5902542
Alignment:
Q  49 ttggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagctg 102  Q
    ||||||||  |||||||| |||||||||||||||||| || |||||||||||||    
T  5902595 ttggagaacatataaaaacaagctgaaaacagtttatgaacatgtcataagctg 5902542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 182
Target Start/End: Complemental strand, 7928351 - 7928211
Alignment:
Q  43 gctatattggagaatttataaaaataagctgaaaacagtttataaa-aatgtc-ataagctgatttaaaaagtgttcccaaatagtcttaacaaagctta 140  Q
    ||||| |||||||| |||| |||||||||||||||||  |||| || |||||| |||||||| ||| ||||||  |  | || ||||| | || | ||||    
T  7928351 gctatcttggagaacttatgaaaataagctgaaaacaacttatgaacaatgtccataagctgttttcaaaagttctttctaacagtctca-cacaactta 7928253  T
Q  141 tgtcagtagataagctcaaatgagtcaatccaaaaaggccct 182  Q
    ||||| ||||||||||||||| || ||||||||| |||||||    
T  7928252 tgtcaatagataagctcaaataagccaatccaaacaggccct 7928211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 180
Target Start/End: Original strand, 9174814 - 9174970
Alignment:
Q  24 ctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataagctgatttaaaaagtgttcccaaa 122  Q
    ||||||||||||| |||||||||| ||  |||  |||| ||||||||||||||| || |||| || ||||||||||| || ||||| |||    | ||||    
T  9174814 ctataagctgttttcataagctatcttacagagcttatgaaaataagctgaaaatagcttatgaacaatgtcataagttgttttaacaagccccctcaaa 9174913  T
Q  123 tagtcttaacaaagcttatgtcagtagataagctcaaatgagtcaatccaaaaaggcc 180  Q
     |||| | ||| | |||||| || ||||||||||||||| ||| |||||||| |||||    
T  9174914 cagtc-tcacataacttatgccaatagataagctcaaataagtaaatccaaataggcc 9174970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 131 - 188
Target Start/End: Original strand, 15305780 - 15305837
Alignment:
Q  131 acaaagcttatgtcagtagataagctcaaatgagtcaatccaaaaaggccctaggtcc 188  Q
    ||||| ||||||||| ||||||||||||||| || ||||||||| |||||||| ||||    
T  15305780 acaaaacttatgtcaatagataagctcaaataagccaatccaaacaggccctaagtcc 15305837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 174
Target Start/End: Original strand, 40158710 - 40158867
Alignment:
Q  17 gtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagctgatttaaaaagtgtt 116  Q
    |||||||| ||||| ||||| |||||| |||  ||||||  ||||  || |||||||||||||  ||||||| ||||||||||||| ||| | ||||       
T  40158710 gtataagcaataagttgttttcataagttattctggagagcttatgtaattaagctgaaaacaacttataaacatgtcataagctgttttcataagttcc 40158809  T
Q  117 cccaaatagtcttaacaaagcttatgtcagtagataagctcaaatgagtcaatccaaa 174  Q
    |||||  ||||| |  |   |||||||||||||||| |||||||| || |||||||||    
T  40158810 cccaatcagtctcacaagttcttatgtcagtagatatgctcaaataagccaatccaaa 40158867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 79
Target Start/End: Complemental strand, 42621452 - 42621391
Alignment:
Q  18 tataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaaca 79  Q
    ||||||||||||||||||| |||||| |||  ||||||| || | |||||||||||||||||    
T  42621452 tataagctataagctgttttcataagttattctggagaacttgtgaaaataagctgaaaaca 42621391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 180
Target Start/End: Complemental strand, 15370282 - 15370238
Alignment:
Q  136 gcttatgtcagtagataagctcaaatgagtcaatccaaaaaggcc 180  Q
    ||||||| |||||||||||||||||| |||||||||||| |||||    
T  15370282 gcttatgccagtagataagctcaaataagtcaatccaaacaggcc 15370238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 183
Target Start/End: Original strand, 30331857 - 30331909
Alignment:
Q  131 acaaagcttatgtcagtagataagctcaaatgagtcaatccaaaaaggcccta 183  Q
    ||||| |||||||||||||||||||| |||| |||||||||||| | ||||||    
T  30331857 acaaaacttatgtcagtagataagctgaaataagtcaatccaaacaagcccta 30331909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 102
Target Start/End: Complemental strand, 43279601 - 43279521
Alignment:
Q  23 gctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataagctg 102  Q
    |||||||| |||||  |||||||||||||||||| || | |||||||| |||||| || |||| |||| ||||||||||||    
T  43279601 gctataagttgtttttataagctatattggagaacttgtgaaaataagttgaaaaaagcttatgaaaattgtcataagctg 43279521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 136 - 183
Target Start/End: Original strand, 1830150 - 1830197
Alignment:
Q  136 gcttatgtcagtagataagctcaaatgagtcaatccaaaaaggcccta 183  Q
    ||||||||||||| |||| ||||||| |||||||||||| ||||||||    
T  1830150 gcttatgtcagtaaataaactcaaataagtcaatccaaacaggcccta 1830197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 131 - 174
Target Start/End: Original strand, 18179055 - 18179098
Alignment:
Q  131 acaaagcttatgtcagtagataagctcaaatgagtcaatccaaa 174  Q
    ||||| ||||||| ||||||||||||||||| ||||||||||||    
T  18179055 acaaaacttatgttagtagataagctcaaataagtcaatccaaa 18179098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 18179317 - 18179258
Alignment:
Q  18 tataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaa 77  Q
    |||||||||||||||| || ||||||||||  ||||||| |||  |||||||||||||||    
T  18179317 tataagctataagctgctttcataagctatcctggagaacttacgaaaataagctgaaaa 18179258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 39 - 181
Target Start/End: Original strand, 36534782 - 36534924
Alignment:
Q  39 ataagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataagctgatttaaaaagtgttcccaaatagtcttaacaaagc 137  Q
    ||||||||||| |||||||| || ||||||||||||||| || |||| || ||| | |||||||| ||| | ||||  ||||||| |||| | ||||| |    
T  36534782 ataagctatataggagaattaatgaaaataagctgaaaatagattatgaacaattttataagctgttttcataagttatcccaaacagtc-tcacaaaac 36534880  T
Q  138 ttatgtcagtagataagctcaaatgagtcaatccaaaaaggccc 181  Q
    |||||  || | |||||||||||| || ||||| ||| ||||||    
T  36534881 ttatgaaagcatataagctcaaataagccaatctaaataggccc 36534924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 80
Target Start/End: Original strand, 16398115 - 16398169
Alignment:
Q  26 ataagctgtttccataagctatattggagaatttataaaaataagctgaaaacag 80  Q
    ||||||| ||| |||||| ||| |||||||| |||| ||||||||||||||||||    
T  16398115 ataagctattttcataagttatgttggagaacttatgaaaataagctgaaaacag 16398169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 85
Target Start/End: Original strand, 19826266 - 19826324
Alignment:
Q  27 taagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat 85  Q
    |||| ||||| ||||||||||| |||||| ||||| |||||||| ||||| ||||||||    
T  19826266 taagatgttttcataagctatactggagagtttatgaaaataagttgaaatcagtttat 19826324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 174
Target Start/End: Original strand, 22878209 - 22878247
Alignment:
Q  136 gcttatgtcagtagataagctcaaatgagtcaatccaaa 174  Q
    |||||||||||| ||||||||||||| ||||||||||||    
T  22878209 gcttatgtcagtggataagctcaaataagtcaatccaaa 22878247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 77
Target Start/End: Complemental strand, 26143708 - 26143658
Alignment:
Q  27 taagctgtttccataagctatattggagaatttataaaaataagctgaaaa 77  Q
    |||||||||| |||||||||  |||||||| |||| |||||||||||||||    
T  26143708 taagctgttttcataagctaacttggagaacttatgaaaataagctgaaaa 26143658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 179
Target Start/End: Original strand, 27317491 - 27317533
Alignment:
Q  137 cttatgtcagtagataagctcaaatgagtcaatccaaaaaggc 179  Q
    |||||||| |||||||||||||||| |||||||||||| ||||    
T  27317491 cttatgtcggtagataagctcaaataagtcaatccaaacaggc 27317533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 174
Target Start/End: Complemental strand, 28677690 - 28677580
Alignment:
Q  64 aaataagctgaaaacagtttataaaaatgtcataagctgatttaaaaagtgttcccaaatagtcttaacaaagcttatgtcagtagataagctcaaatga 163  Q
    |||||||| |||||||  |||| |||||||||||||||| ||| | ||||  ||||||| ||||||| ||   ||||||  |||| |||||||||||  |    
T  28677690 aaataagccgaaaacaacttatgaaaatgtcataagctgttttcataagttctcccaaacagtcttagcagtacttatgcaagtaaataagctcaaaaaa 28677591  T
Q  164 gtcaatccaaa 174  Q
     ||||||||||    
T  28677590 atcaatccaaa 28677580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 183
Target Start/End: Complemental strand, 44438920 - 44438753
Alignment:
Q  14 tttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagctgatttaaaaagt 113  Q
    |||||| |||| ||||||||| | |||||| |||  ||||||  || |  ||||||||||||||||| |||| || ||||||||||||| ||| | | ||    
T  44438920 tttgtacaagccataagctgtcttcataagttatcctggagatcttgtggaaataagctgaaaacaggttatgaacatgtcataagctgttttcacatgt 44438821  T
Q  114 gttcccaaatagtcttaacaaagcttatgtcagtagataagctcaaatgagtcaatccaaaaaggcccta 183  Q
       |||| | ||||| ||   |  ||||||| |||||||||||||||| ||||||| |||| ||||||||    
T  44438820 tcccccagacagtctcaagtga--ttatgtctgtagataagctcaaatcagtcaattcaaacaggcccta 44438753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 14 - 55
Target Start/End: Complemental strand, 579518 - 579477
Alignment:
Q  14 tttgtataagctataagctgtttccataagctatattggaga 55  Q
    ||||||||||||||||||||||| |||||| ||| |||||||    
T  579518 tttgtataagctataagctgtttacataagttatgttggaga 579477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 101
Target Start/End: Original strand, 1810644 - 1810740
Alignment:
Q  4 ttaaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagct 101  Q
    ||||||| | |||||||||| |||| | |||||  ||||||||| ||| ||| ||||| ||||||||||||||| |||||||  |  |||||||||||    
T  1810644 ttaaattgtttttgtataagttata-gttgtttttataagctatcttgaagagtttatgaaaataagctgaaaaaagtttattgacctgtcataagct 1810740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 77
Target Start/End: Complemental strand, 1893371 - 1893299
Alignment:
Q  4 ttaaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaa 77  Q
    ||||||||| || ||| |||||||||||||||| |  ||||||| |||||||| || | |||||||||||||||    
T  1893371 ttaaattat-ttcgtaaaagctataagctgttttcggaagctatcttggagaacttgtgaaaataagctgaaaa 1893299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 49 - 102
Target Start/End: Complemental strand, 5902658 - 5902605
Alignment:
Q  49 ttggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagctg 102  Q
    |||||||| ||||||||  |||||||||||||||||| || | |||||||||||    
T  5902658 ttggagaacttataaaatcaagctgaaaacagtttatgaacacgtcataagctg 5902605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 40 - 101
Target Start/End: Original strand, 12464679 - 12464740
Alignment:
Q  40 taagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagct 101  Q
    |||||||| ||| |||| |||| |||||||||||| ||||  |||||||||||| |||||||    
T  12464679 taagctatcttgaagaacttatgaaaataagctgagaacaacttataaaaatgtgataagct 12464740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 32 - 85
Target Start/End: Original strand, 15977992 - 15978045
Alignment:
Q  32 tgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat 85  Q
    ||||| |||||||||| |||||||  |||| ||||||||||||||||| |||||    
T  15977992 tgttttcataagctattttggagagattatgaaaataagctgaaaacaatttat 15978045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 119 - 172
Target Start/End: Complemental strand, 17775442 - 17775389
Alignment:
Q  119 caaatagtcttaacaaagcttatgtcagtagataagctcaaatgagtcaatcca 172  Q
    |||| |||||||| | |||||||||||||||||| |||||||| ||| ||||||    
T  17775442 caaacagtcttaaaagagcttatgtcagtagatatgctcaaataagttaatcca 17775389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 23 - 99
Target Start/End: Original strand, 26202026 - 26202103
Alignment:
Q  23 gctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataag 99  Q
    |||||||| |||||  ||||| |||||||||||| |||| |||||||| |||||| || |||| |||| |||||||||    
T  26202026 gctataagttgtttttataagatatattggagaacttatgaaaataagttgaaaaaagcttatgaaaattgtcataag 26202103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 14 - 91
Target Start/End: Original strand, 32592575 - 32592652
Alignment:
Q  14 tttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaat 91  Q
    |||||||| |||||||| |||||  |||||| ||||||||||| |||| |||||||| ||| || || |||| |||||    
T  32592575 tttgtatacgctataagttgtttttataagcaatattggagaacttatgaaaataagttgagaaaagcttatgaaaat 32592652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 72
Target Start/End: Complemental strand, 6167358 - 6167306
Alignment:
Q  20 taagctataagctgtttccataagctatattggagaatttataaaaataagct 72  Q
    |||||||||||||||||  ||||||||| |||||||| ||||  |||||||||    
T  6167358 taagctataagctgtttttataagctattttggagaacttatggaaataagct 6167306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 86
Target Start/End: Original strand, 11513891 - 11513959
Alignment:
Q  18 tataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttata 86  Q
    ||||||||||||| ||||| ||||||||||  ||||||| || |  |||||||||||||| || |||||    
T  11513891 tataagctataagttgttttcataagctatcatggagaacttttggaaataagctgaaaatagcttata 11513959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 86
Target Start/End: Complemental strand, 13736366 - 13736302
Alignment:
Q  22 agctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttata 86  Q
    ||||||||||||||| ||||||||||| | ||||  |||| |||||||  ||||||||| |||||    
T  13736366 agctataagctgttttcataagctatactagagagcttatgaaaataacttgaaaacagcttata 13736302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 95
Target Start/End: Complemental strand, 19333397 - 19333325
Alignment:
Q  23 gctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtca 95  Q
    |||| ||||||||| | ||| ||||||||||||  |||| |||||||||||| ||||| |||| || ||||||    
T  19333397 gctacaagctgttttcttaaactatattggagagcttatgaaaataagctgagaacagcttatgaacatgtca 19333325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 58
Target Start/End: Original strand, 25800822 - 25800862
Alignment:
Q  18 tataagctataagctgtttccataagctatattggagaatt 58  Q
    ||||||||||||||||||| |||||||||| ||| ||||||    
T  25800822 tataagctataagctgttttcataagctatcttgaagaatt 25800862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 180
Target Start/End: Complemental strand, 28803489 - 28803445
Alignment:
Q  136 gcttatgtcagtagataagctcaaatgagtcaatccaaaaaggcc 180  Q
    ||||||| | |||||||||||||||| |||||||||||| |||||    
T  28803489 gcttatgccggtagataagctcaaataagtcaatccaaataggcc 28803445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 102
Target Start/End: Original strand, 33256733 - 33256817
Alignment:
Q  18 tataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagctg 102  Q
    ||||| |||||||| |||| ||||||| ||  || |||   ||| |||||||||||| |||||||||| || |||||||||||||    
T  33256733 tataaactataagcagttttcataagccatcctgaagaccgtatgaaaataagctgagaacagtttatgaacatgtcataagctg 33256817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 106
Target Start/End: Original strand, 33503048 - 33503088
Alignment:
Q  66 ataagctgaaaacagtttataaaaatgtcataagctgattt 106  Q
    |||||||||||| || |||| ||||||||||||||||||||    
T  33503048 ataagctgaaaatagcttatgaaaatgtcataagctgattt 33503088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 174
Target Start/End: Complemental strand, 40059418 - 40059382
Alignment:
Q  138 ttatgtcagtagataagctcaaatgagtcaatccaaa 174  Q
    |||||||||||||||| ||||||| ||||||||||||    
T  40059418 ttatgtcagtagataaactcaaataagtcaatccaaa 40059382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 174
Target Start/End: Complemental strand, 40085318 - 40085282
Alignment:
Q  138 ttatgtcagtagataagctcaaatgagtcaatccaaa 174  Q
    |||||||||||||||| ||||||| ||||||||||||    
T  40085318 ttatgtcagtagataaactcaaataagtcaatccaaa 40085282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 180
Target Start/End: Original strand, 40759271 - 40759315
Alignment:
Q  136 gcttatgtcagtagataagctcaaatgagtcaatccaaaaaggcc 180  Q
    |||||||||| ||||||||||||||| || ||||||||| |||||    
T  40759271 gcttatgtcaatagataagctcaaataaggcaatccaaacaggcc 40759315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 174
Target Start/End: Complemental strand, 40837394 - 40837358
Alignment:
Q  138 ttatgtcagtagataagctcaaatgagtcaatccaaa 174  Q
    |||||||||||||||||||||||| || |||||||||    
T  40837394 ttatgtcagtagataagctcaaataagccaatccaaa 40837358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 161
Target Start/End: Original strand, 43036574 - 43036692
Alignment:
Q  42 agctatattggagaatttataaaaataagctgaaaacagtttataaa-aatgtcataagctgatttaaaaagtgttcccaaatagtcttaacaaagctta 140  Q
    |||||| ||||| || |||| ||| |||||| |||||||||||| || ||||||||||| || | | | |||| |||||||||| ||| | |||| ||||    
T  43036574 agctatcttggaaaacttatgaaagtaagct-aaaacagtttatgaataatgtcataagatgttctcataagttttcccaaatactctca-caaaactta 43036671  T
Q  141 tgtcagtagataagctcaaat 161  Q
    ||| | |||||||||||||||    
T  43036672 tgtaactagataagctcaaat 43036692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 99
Target Start/End: Original strand, 45229518 - 45229586
Alignment:
Q  32 tgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataag 99  Q
    ||||| |||||||||| || ||||| |||| ||||||||||||||| || | || ||||||||||||||    
T  45229518 tgttttcataagctatcttcgagaacttatgaaaataagctgaaaaaagctaatgaaaaatgtcataag 45229586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 52; Significance: 7e-21; HSPs: 57)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 4 - 174
Target Start/End: Original strand, 20880455 - 20880625
Alignment:
Q  4 ttaaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataagctg 102  Q
    ||||||| | |||||||| ||||||| ||||||  | |||||||||||||||| |||| |||||||||| |||| || |||| |||| ||||||||||||    
T  20880455 ttaaattgtttttgtatatgctataaactgtttttaaaagctatattggagaacttatgaaaataagctcaaaaaagcttatgaaaattgtcataagctg 20880554  T
Q  103 atttaaaaagtgttcccaaatagtcttaacaaagcttatgtcagtagataagctcaaatgagtcaatccaaa 174  Q
     ||| | | ||  |||||||||||| |||  || ||||||  ||||||||||||||||| || |||||||||    
T  20880555 ttttcataggttctcccaaatagtc-taaggaaacttatgcaagtagataagctcaaataagccaatccaaa 20880625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 166
Target Start/End: Complemental strand, 34610897 - 34610735
Alignment:
Q  4 ttaaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaa-aatgtcataagctg 102  Q
    ||||||||| |||||| ||| |||||| || || |||||||||| |||| ||| |||| ||||| ||||||||||   |||| || |||||||||||| |    
T  34610897 ttaaattatttttgtacaagttataagttgctttcataagctatcttggcgaacttatgaaaatcagctgaaaaccacttatgaacaatgtcataagcag 34610798  T
Q  103 atttaaaaagtgttcccaaatagtcttaacaaagcttatgtcagtagataagctcaaatgagtc 166  Q
     ||| | ||||  |||||||||||  || |||| ||||||||||||||||||||||||| ||||    
T  34610797 ttttcataagttctcccaaatagttgta-caaaacttatgtcagtagataagctcaaataagtc 34610735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 15 - 174
Target Start/End: Complemental strand, 36507171 - 36507013
Alignment:
Q  15 ttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagctgatttaaaaagtg 114  Q
    ||||||||||||||||| | || ||||| |||| ||||||||||||||||||||||||||||  |  ||||||| | ||||||||||  ||| | ||||     
T  36507171 ttgtataagctataagcagctttcataaactattttggagaatttataaaaataagctgaaa--aacttataaacacgtcataagctattttcagaagtc 36507074  T
Q  115 ttcccaaatagtcttaacaaag--cttatgtcagtagataagctcaaatgagtcaatccaaa 174  Q
     ||||||| |||| | ||||||  ||||| ||||||||||| ||||||| || |||||||||    
T  36507073 ctcccaaacagtc-tcacaaagctcttatatcagtagataaactcaaataagccaatccaaa 36507013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 14 - 80
Target Start/End: Complemental strand, 50600259 - 50600193
Alignment:
Q  14 tttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacag 80  Q
    |||| |||||||||||||||||| ||| ||||||||||||||| |||| ||||||||||||||||||    
T  50600259 tttgaataagctataagctgttttcatcagctatattggagaacttatgaaaataagctgaaaacag 50600193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 14 - 99
Target Start/End: Original strand, 1816572 - 1816657
Alignment:
Q  14 tttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataag 99  Q
    |||||||||| |||||| ||||| ||||||||||| ||||||  |||| ||||||||||||||||||  ||| |||||||||||||    
T  1816572 tttgtataagatataagttgttttcataagctatactggagagcttatcaaaataagctgaaaacagcctatgaaaatgtcataag 1816657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 17 - 102
Target Start/End: Complemental strand, 39602288 - 39602203
Alignment:
Q  17 gtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagctg 102  Q
    ||||||| |||||||||||| |||||||||| || ||||| |||| |||||||| |||||||| ||||| || |||||||||||||    
T  39602288 gtataagttataagctgttttcataagctatctttgagaacttatgaaaataagttgaaaacaatttatgaacatgtcataagctg 39602203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 14 - 161
Target Start/End: Original strand, 30443882 - 30444029
Alignment:
Q  14 tttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataagctgatttaaaaag 112  Q
    |||||||| ||||||||||||||  |||| ||||||||||||| |||| ||||||||||||||| || || | |||| |||||||||||| ||| | |||    
T  30443882 tttgtatatgctataagctgtttttataaactatattggagaacttatgaaaataagctgaaaaaagcttgtgaaaattgtcataagctgttttcataag 30443981  T
Q  113 tgttcccaaatagtcttaacaaagcttatgtcagtagataagctcaaat 161  Q
       | ||||| ||||| | ||||  ||||| ||||||||||||||||||    
T  30443982 ctctaccaaacagtctcaccaaa-tttatgccagtagataagctcaaat 30444029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 174
Target Start/End: Original strand, 21367646 - 21367816
Alignment:
Q  4 ttaaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataagctg 102  Q
    ||||||| | || ||||||  |||||| ||||| |||||||||| |||||||| |||| |||||||||||||||||| || | || ||||||||||||||    
T  21367646 ttaaattgttttcgtataatgtataagttgttttcataagctatcttggagaacttatgaaaataagctgaaaacagcttgtgaacaatgtcataagctg 21367745  T
Q  103 atttaaaaagtgttcccaaatagtcttaacaaagcttatgtcagtagataagctcaaatgagtcaatccaaa 174  Q
     ||| | ||||  ||||||| ||||   ||||| ||||||   |||||||| ||||||| || |||||||||    
T  21367746 ttttcataagttctcccaaacagtc-ccacaaaacttatgctggtagataatctcaaataagccaatccaaa 21367816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 96
Target Start/End: Original strand, 40665410 - 40665500
Alignment:
Q  6 aaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcat 96  Q
    ||||||| ||||| |||| |||||| ||||| |||||| ||| |||||||  ||||||||||||||||||||||| |||| || |||||||    
T  40665410 aaattatttttgtgtaagttataagatgttttcataagttatcttggagagcttataaaaataagctgaaaacagcttatgaacatgtcat 40665500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 4 - 77
Target Start/End: Complemental strand, 35959547 - 35959474
Alignment:
Q  4 ttaaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaa 77  Q
    ||||||||| |||||||| ||| |||| |||||| |||||||||||| |||||||| | |||||||||||||||    
T  35959547 ttaaattatttttgtatatgctgtaagttgtttctataagctatattagagaatttttgaaaataagctgaaaa 35959474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 30 - 98
Target Start/End: Complemental strand, 3845627 - 3845559
Alignment:
Q  30 gctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataa 98  Q
    ||||||| |||||| ||| |||||||| |||| ||||||||||||||| || |||||||||||||||||    
T  3845627 gctgttttcataagttatcttggagaacttatgaaaataagctgaaaaaagattataaaaatgtcataa 3845559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 32 - 170
Target Start/End: Complemental strand, 9832818 - 9832680
Alignment:
Q  32 tgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataagctgatttaaaaagtgttcccaaatagtctta 130  Q
    ||||| ||||| || | ||| |||| ||||||| ||||| |||||| ||||||| ||||| | ||||||||| ||| ||||||  ||||||| ||| ||     
T  9832818 tgttttcataaactgtcttgaagaacttataaatataagttgaaaaaagtttatgaaaaaaggcataagctgttttcaaaagttctcccaaacagt-ttg 9832720  T
Q  131 acaaagcttatgtcagtagataagctcaaatgagtcaatc 170  Q
    ||||| ||||||||| || |||||||||||| ||||||||    
T  9832719 acaaaacttatgtcaataaataagctcaaataagtcaatc 9832680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 75
Target Start/End: Complemental strand, 46886783 - 46886712
Alignment:
Q  4 ttaaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaa 75  Q
    ||||||||| ||||||| ||||||||||||||| |||||||||| |||||||| || | ||||||| |||||    
T  46886783 ttaaattatttttgtatgagctataagctgttttcataagctatcttggagaacttttgaaaataacctgaa 46886712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 180
Target Start/End: Complemental strand, 402633 - 402457
Alignment:
Q  4 ttaaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataagctg 102  Q
    ||||||| | || ||||||| ||||||||||||  |||| |||| ||| |||| || | ||| |||||||||||||| |||| || ||||||||||||||    
T  402633 ttaaattgttttcgtataagttataagctgtttttataatctatcttgaagaacttgtgaaattaagctgaaaacagcttatgaacaatgtcataagctg 402534  T
Q  103 atttaaaaagtgttcccaaatagtcttaacaaagcttatgtcagtagataagctcaaatgagtcaatccaaaaaggcc 180  Q
     ||| | | ||  ||||||| ||||||  |||| ||||||| ||| ||||| |||||||  ||||| ||||| |||||    
T  402533 ttttcatacgttctcccaaacagtctt-gcaaaacttatgttagttgataaactcaaataggtcaacccaaacaggcc 402457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 79
Target Start/End: Original strand, 2719457 - 2719522
Alignment:
Q  14 tttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaaca 79  Q
    ||||| |||||||||| |||||| |||||||||| |||||||| |||| |||||||||||| ||||    
T  2719457 tttgtttaagctataaactgttttcataagctatcttggagaacttatgaaaataagctgagaaca 2719522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 102
Target Start/End: Original strand, 46030983 - 46031068
Alignment:
Q  18 tataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataagctg 102  Q
    ||||| || ||||||||||| |||| |||| |||||||| |||| |||||||||||||||||| |||| || ||||||||| ||||    
T  46030983 tataacctgtaagctgtttcaataaactatcttggagaacttattaaaataagctgaaaacagcttatgaataatgtcataggctg 46031068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 16 - 76
Target Start/End: Complemental strand, 44747487 - 44747427
Alignment:
Q  16 tgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaa 76  Q
    |||||| |||||||||||||| |||||||||| ||||| || |||| ||||||||||||||    
T  44747487 tgtataggctataagctgttttcataagctatcttggaaaacttatgaaaataagctgaaa 44747427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 39 - 122
Target Start/End: Complemental strand, 23808120 - 23808037
Alignment:
Q  39 ataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagctgatttaaaaagtgttcccaaa 122  Q
    ||||||||| ||||||| ||||| |||||||| |||||||| ||| | || ||||||||||||| ||| | |||| ||||||||    
T  23808120 ataagctatcttggagagtttatgaaaataagatgaaaacaatttgtgaacatgtcataagctgctttcataagttttcccaaa 23808037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 85
Target Start/End: Complemental strand, 28622080 - 28622009
Alignment:
Q  14 tttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat 85  Q
    ||||| ||||||||||||||||| ||||| |||| || ||||| |||| ||||||| |||||||||| ||||    
T  28622080 tttgtgtaagctataagctgttttcataaactatcttcgagaacttatgaaaataacctgaaaacagcttat 28622009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 85
Target Start/End: Complemental strand, 36783411 - 36783344
Alignment:
Q  18 tataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat 85  Q
    ||||| |||| |||||||| ||||||||||||||||| | |||| || ||||||||||||||| ||||    
T  36783411 tataaactattagctgttttcataagctatattggagcaattatgaatataagctgaaaacagcttat 36783344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 174
Target Start/End: Original strand, 37795575 - 37795744
Alignment:
Q  4 ttaaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagttta-taaaaatgtcataagctg 102  Q
    ||||||| | || ||||||||||||| ||||||||||||||||| ||||  |||  || ||| ||||||||||| || |||  || || ||| |||| ||    
T  37795575 ttaaattgttttcgtataagctataaactgtttccataagctatcttgg-caatccatgaaagtaagctgaaaatagcttaggaacaacgtcgtaagttg 37795673  T
Q  103 atttaaaaagtgttcccaaatagtcttaacaaagcttatgtcagtagataagctcaaatgagtcaatccaaa 174  Q
     ||||| ||||  | ||||| |||||| ||||  ||||||||||| |||||||| |||| ||||||||||||    
T  37795674 ttttaataagtccttccaaacagtctt-acaagacttatgtcagtggataagcttaaataagtcaatccaaa 37795744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 179
Target Start/End: Original strand, 45541550 - 45541725
Alignment:
Q  4 ttaaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagctga 103  Q
    ||||||||| || ||||||||||||   | ||| |||||||||| ||||| || |||| | ||||| |||||||||| |||| || |||||||||||||     
T  45541550 ttaaattattttcgtataagctatagtttattttcataagctatcttggataacttatgagaataacctgaaaacagcttatgaacatgtcataagctgt 45541649  T
Q  104 tttaaaaagtgttcccaaatagtcttaacaaagcttatgtcagtagataagctcaaatgagtcaatccaaaaaggc 179  Q
    ||| | ||||  | | ||| |||||||  |  | ||||  || || |||||||||||| |||||||||||| ||||    
T  45541650 tttcataagttcttctaaacagtcttacaagtgtttataccattaaataagctcaaataagtcaatccaaacaggc 45541725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 175
Target Start/End: Complemental strand, 18405912 - 18405751
Alignment:
Q  14 tttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaa-tgtcataagctgatttaaaaag 112  Q
    |||||||| |||||||| ||||| |||||||||| |||||||| |||| ||| ||||||  ||| || |||| |||| |||| | | ||| ||| | |||    
T  18405912 tttgtatatgctataagttgttttcataagctatcttggagaacttatgaaattaagcttgaaaaagattatgaaaagtgtcgtgaactgttttcataag 18405813  T
Q  113 tgttcccaaatagtcttaacaaagcttatgtcagtagataagctcaaatgagtcaatccaaaa 175  Q
    |  |  |||| ||||| | |||| ||||||||||||||||||||||||| |  ||||||||||    
T  18405812 ttcttgcaaacagtctca-caaaacttatgtcagtagataagctcaaataaaccaatccaaaa 18405751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 132 - 174
Target Start/End: Complemental strand, 26990188 - 26990146
Alignment:
Q  132 caaagcttatgtcagtagataagctcaaatgagtcaatccaaa 174  Q
    |||||| ||||||||||||||||||||||| ||||||||||||    
T  26990188 caaagcctatgtcagtagataagctcaaataagtcaatccaaa 26990146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 99
Target Start/End: Complemental strand, 33405244 - 33405162
Alignment:
Q  18 tataagctataagctgtttccataagctatattggagaatttat-aaaaataagctgaaaacagtttataaaaatgtcataag 99  Q
    ||||||||||||||||||| |||||||||| ||| |||| |||| |||  ||||| ||||||||||||| || || |||||||    
T  33405244 tataagctataagctgttttcataagctatcttgaagaacttatgaaagttaagccgaaaacagtttatgaacatatcataag 33405162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 96
Target Start/End: Original strand, 41633361 - 41633431
Alignment:
Q  26 ataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcat 96  Q
    ||||||||||| ||| |||||| |||||||  |||| ||||||||||||||||| |||||| | |||||||    
T  41633361 ataagctgttttcatcagctattttggagagcttatgaaaataagctgaaaacaatttatagacatgtcat 41633431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 183
Target Start/End: Original strand, 39980727 - 39980887
Alignment:
Q  23 gctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataagctgatttaaaaagtgttcccaa 121  Q
    |||||||| |||||  |||||||||||||||||| |||| |||||||| |||||| || |||| |||   ||||||||||| ||| | ||||  ||  ||    
T  39980727 gctataagttgtttttataagctatattggagaacttatgaaaataagttgaaaaaagcttatgaaaccagtcataagctgttttcataagttctcttaa 39980826  T
Q  122 atagtcttaacaaagcttatgtcagtagataagctcaaatgagtcaatccaaaaaggcccta 183  Q
    | |||| | ||||| ||||||  ||||||||||||||||  || ||||||||| || |||||    
T  39980827 acagtc-tcacaaaacttatgctagtagataagctcaaacaagccaatccaaacagacccta 39980887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 77
Target Start/End: Original strand, 47132310 - 47132383
Alignment:
Q  4 ttaaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaa 77  Q
    ||||||| | |||||||| |||||| | |||||  |||||||||||||||||| |||| |||||||| ||||||    
T  47132310 ttaaattgtttttgtatatgctataggttgtttttataagctatattggagaagttatgaaaataagttgaaaa 47132383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 28 - 85
Target Start/End: Original strand, 48528559 - 48528616
Alignment:
Q  28 aagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat 85  Q
    ||||||||| ||||||||||  |||||| |||||| ||||||||||||||| ||||||    
T  48528559 aagctgttttcataagctattctggagagtttatagaaataagctgaaaactgtttat 48528616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 183
Target Start/End: Complemental strand, 16073005 - 16072953
Alignment:
Q  131 acaaagcttatgtcagtagataagctcaaatgagtcaatccaaaaaggcccta 183  Q
    ||||| ||||||||| ||||||||||||||| |||||||||||| ||| ||||    
T  16073005 acaaaacttatgtcattagataagctcaaataagtcaatccaaacaggtccta 16072953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 97
Target Start/End: Original strand, 20669172 - 20669244
Alignment:
Q  25 tataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcata 97  Q
    |||||||||||| |||||||||| |||||||  ||||  |||||||| |||||||| |||| || ||||||||    
T  20669172 tataagctgttttcataagctatcttggagagcttatgtaaataagcggaaaacagcttatgaacatgtcata 20669244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 102
Target Start/End: Complemental strand, 54837115 - 54837027
Alignment:
Q  14 tttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagctg 102  Q
    ||||||||| || |||| | ||| |||||||||| ||||| |  |||||||||||||| |||||||  |||| || |||||||||||||    
T  54837115 tttgtataaactgtaagttattttcataagctatcttggacagcttataaaaataagcggaaaacaagttatgaacatgtcataagctg 54837027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 14 - 61
Target Start/End: Complemental strand, 12862329 - 12862282
Alignment:
Q  14 tttgtataagctataagctgtttccataagctatattggagaatttat 61  Q
    |||||||| |||||||| ||||| ||||||||||||||||||| ||||    
T  12862329 tttgtatatgctataagttgttttcataagctatattggagaacttat 12862282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 97
Target Start/End: Complemental strand, 14548798 - 14548719
Alignment:
Q  18 tataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcata 97  Q
    ||||||||||||| ||||| |||||| |||  ||||||  ||||  |||||||||||||||||  ||| |||||||||||    
T  14548798 tataagctataagttgttttcataagttattctggagagcttatggaaataagctgaaaacagcctattaaaatgtcata 14548719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 20173849 - 20173802
Alignment:
Q  136 gcttatgtcagtagataagctcaaatgagtcaatccaaaaaggcccta 183  Q
    |||||| ||| |||||| |||||||| |||||||||||||||||||||    
T  20173849 gcttatttcaatagatacgctcaaataagtcaatccaaaaaggcccta 20173802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 85
Target Start/End: Original strand, 22343601 - 22343668
Alignment:
Q  18 tataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat 85  Q
    |||||| |||||||||||||||||||||||| || |||  ||||  |||| ||||||||| |||||||    
T  22343601 tataagttataagctgtttccataagctatactgaagagattatgcaaatgagctgaaaaaagtttat 22343668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 131 - 174
Target Start/End: Complemental strand, 25447209 - 25447166
Alignment:
Q  131 acaaagcttatgtcagtagataagctcaaatgagtcaatccaaa 174  Q
    ||||| ||||||||||||||||| ||||||| ||||||||||||    
T  25447209 acaaaacttatgtcagtagataaactcaaataagtcaatccaaa 25447166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 33883831 - 33883748
Alignment:
Q  14 tttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcata 97  Q
    ||||||| | ||||| | ||||| |||||||||| || ||||| |||| |||||||||||||||||  |||| || ||||||||    
T  33883831 tttgtatgaactatatgttgtttacataagctatcttagagaacttatgaaaataagctgaaaacaacttatgaacatgtcata 33883748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 102
Target Start/End: Complemental strand, 36631142 - 36631043
Alignment:
Q  4 ttaaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaat-gtcataagctg 102  Q
    ||||||| | |||||| | |||||||| |||||  || ||||||||||||||| |||| ||||||||| ||||| || || | ||||| |||||||||||    
T  36631142 ttaaattgtttttgtacatgctataagttgtttttatgagctatattggagaacttatgaaaataagcagaaaaaagcttttgaaaatcgtcataagctg 36631043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 25 - 76
Target Start/End: Complemental strand, 38665359 - 38665308
Alignment:
Q  25 tataagctgtttccataagctatattggagaatttataaaaataagctgaaa 76  Q
    |||||||||||||| |||||||| ||||||||||||| |||| ||| |||||    
T  38665359 tataagctgtttccttaagctatcttggagaatttatgaaaagaagttgaaa 38665308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 25447338 - 25447292
Alignment:
Q  1 aacttaaattatatttgtataagctataagctgtttccataagctat 47  Q
    |||||||||| | |||||||||||||||| |||||| ||||||||||    
T  25447338 aacttaaattgtttttgtataagctataaactgttttcataagctat 25447292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 102
Target Start/End: Complemental strand, 30923941 - 30923891
Alignment:
Q  52 gagaatttataaaaataagctgaaaacagtttataaaaatgtcataagctg 102  Q
    |||| |||||| ||||||||||||||||| ||||| | |||||||||||||    
T  30923941 gagagtttatagaaataagctgaaaacagcttatagacatgtcataagctg 30923891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 102
Target Start/End: Complemental strand, 53789539 - 53789453
Alignment:
Q  17 gtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataagctg 102  Q
    ||||| |||||||| ||||  ||||||||||  ||||||| |||| ||| ||||||||||| || |||| |||| ||||||||||||    
T  53789539 gtatatgctataagttgttatcataagctatcatggagaacttatgaaattaagctgaaaaaagcttatgaaaagtgtcataagctg 53789453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 99
Target Start/End: Original strand, 2201121 - 2201202
Alignment:
Q  18 tataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataag 99  Q
    ||||||||||||||||||| ||| |||||| ||||| | ||||   ||| |||||||||| ||||||| || || |||||||    
T  2201121 tataagctataagctgttttcattagctatcttggatagtttaaggaaaaaagctgaaaagagtttatgaacatatcataag 2201202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 102
Target Start/End: Original strand, 4401026 - 4401122
Alignment:
Q  4 ttaaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataagctg 102  Q
    ||||||||| || ||||| |||||||| |||||   |||| |||||||||||| |||| |||||||| | ||||||| ||||  ||| ||||||||||||    
T  4401026 ttaaattattttcgtatatgctataagttgttt---taagttatattggagaacttatgaaaataagttaaaaacagcttatggaaattgtcataagctg 4401122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 85
Target Start/End: Original strand, 26878096 - 26878177
Alignment:
Q  4 ttaaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat 85  Q
    ||||||| | ||||||  || |||||| ||||| ||| |||||| ||| |||||| || |||||| ||||||||||||||||    
T  26878096 ttaaattgtgtttgtacgagttataagttgttttcattagctatcttgaagaattaatgaaaatatgctgaaaacagtttat 26878177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 137 - 174
Target Start/End: Original strand, 26911703 - 26911740
Alignment:
Q  137 cttatgtcagtagataagctcaaatgagtcaatccaaa 174  Q
    ||||||||||||||||| ||||||| ||||||||||||    
T  26911703 cttatgtcagtagataaactcaaataagtcaatccaaa 26911740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 56 - 172
Target Start/End: Complemental strand, 31365227 - 31365111
Alignment:
Q  56 atttataaaaataagctgaaaacagtttataaaaat-gtcataagctgatttaaaaagtgttcccaaatagtcttaacaaagcttatgtcagtagataag 154  Q
    |||||| ||||| || |||||| || |||| ||||| ||||||||||| ||| | ||||  ||||||| ||||| | |||| |||||| || ||||||||    
T  31365227 atttatgaaaatgagttgaaaaaagcttatgaaaattgtcataagctgctttcataagttctcccaaacagtctca-caaaacttatgccaatagataag 31365129  T
Q  155 ctcaaatgagtcaatcca 172  Q
    ||||||| || |||||||    
T  31365128 ctcaaataagccaatcca 31365111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 132 - 173
Target Start/End: Complemental strand, 33405155 - 33405114
Alignment:
Q  132 caaagcttatgtcagtagataagctcaaatgagtcaatccaa 173  Q
    |||| ||||||||||||||||| ||||||| |||||||||||    
T  33405155 caaaacttatgtcagtagataaactcaaataagtcaatccaa 33405114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 36139870 - 36139955
Alignment:
Q  17 gtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagctg 102  Q
    |||||||||||||| ||||||  ||  |||| ||| |||  |||| |||||||||||||||||| || | || |||||||||||||    
T  36139870 gtataagctataagttgtttcattatactatcttgaagagcttatgaaaataagctgaaaacagcttgtgaacatgtcataagctg 36139955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 53 - 130
Target Start/End: Original strand, 47132022 - 47132099
Alignment:
Q  53 agaatttataaaaataagctgaaaacagtttataaaaatgtcataagctgatttaaaaagtgttcccaaatagtctta 130  Q
    |||| ||||||||||||||||||||||||||||  | ||| |||||| || ||| | ||||  || ||||||||||||    
T  47132022 agaacttataaaaataagctgaaaacagtttatggatatgacataagttgttttcataagttctctcaaatagtctta 47132099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 39 - 122
Target Start/End: Original strand, 901938 - 902022
Alignment:
Q  39 ataagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataagctgatttaaaaagtgttcccaaa 122  Q
    |||||||||||||||||| |||| |||||||| |||||| || ||||  ||||||| || ||||| ||| | |||| ||||||||    
T  901938 ataagctatattggagaacttatgaaaataagttgaaaaaagcttatggaaaatgttattagctgttttcataagttttcccaaa 902022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 148 - 188
Target Start/End: Complemental strand, 2100126 - 2100086
Alignment:
Q  148 agataagctcaaatgagtcaatccaaaaaggccctaggtcc 188  Q
    |||||||||||||| |||||||||||| || ||||||||||    
T  2100126 agataagctcaaataagtcaatccaaacagaccctaggtcc 2100086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 180
Target Start/End: Original strand, 22667514 - 22667558
Alignment:
Q  136 gcttatgtcagtagataagctcaaatgagtcaatccaaaaaggcc 180  Q
    |||||||||||||||||||||||||| || ||||| ||| |||||    
T  22667514 gcttatgtcagtagataagctcaaataagccaatcgaaataggcc 22667558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 180
Target Start/End: Original strand, 22724153 - 22724197
Alignment:
Q  136 gcttatgtcagtagataagctcaaatgagtcaatccaaaaaggcc 180  Q
    |||||||||||||||||||||||||| || ||||| ||| |||||    
T  22724153 gcttatgtcagtagataagctcaaataagccaatcgaaataggcc 22724197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 24887360 - 24887296
Alignment:
Q  18 tataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtt 82  Q
    ||||||||| ||||||||| ||||||||||  ||||||  ||||   ||||||||||||||||||    
T  24887360 tataagctaaaagctgttttcataagctatcctggagagcttatgggaataagctgaaaacagtt 24887296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 137 - 177
Target Start/End: Original strand, 46407618 - 46407658
Alignment:
Q  137 cttatgtcagtagataagctcaaatgagtcaatccaaaaag 177  Q
    |||||||| |||||||||||||||| || ||||||||||||    
T  46407618 cttatgtcggtagataagctcaaattagccaatccaaaaag 46407658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 49; Significance: 4e-19; HSPs: 54)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 15 - 182
Target Start/End: Complemental strand, 30251534 - 30251367
Alignment:
Q  15 ttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataagctgatttaaaaagt 113  Q
    ||||||| | |||||||||||| |||||||||| |||||  | |||| ||||||||||| ||| || |||| |||||||  |||||||| |||   ||||    
T  30251534 ttgtatatgttataagctgttttcataagctatcttggaccacttatgaaaataagctgtaaaaagcttatgaaaaatgcaataagctgttttcgtaagt 30251435  T
Q  114 gttcccaaatagtcttaacaaagcttatgtcagtagataagctcaaatgagtcaatccaaaaaggccct 182  Q
      ||||||| ||||| |  ||| ||||||||||||||||||||||||| || ||||||||| |||||||    
T  30251434 tctcccaaacagtctcacgaaa-cttatgtcagtagataagctcaaataagccaatccaaacaggccct 30251367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 17 - 80
Target Start/End: Original strand, 10114481 - 10114544
Alignment:
Q  17 gtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacag 80  Q
    |||||||||||||||||||| ||| |||||||||||||||  ||| ||||||||||||||||||    
T  10114481 gtataagctataagctgttttcattagctatattggagaacatatgaaaataagctgaaaacag 10114544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 102
Target Start/End: Original strand, 10120735 - 10120834
Alignment:
Q  4 ttaaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataagctg 102  Q
    ||||||| | || |||||| ||||||||||||| ||| | ||||||||||||| |||| ||||||||||||||||||  ||| | |||||||||||||||    
T  10120735 ttaaattgttttggtataacctataagctgtttacattaactatattggagaacttatgaaaataagctgaaaacagcatatgataaatgtcataagctg 10120834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 27028822 - 27028909
Alignment:
Q  16 tgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataagctg 102  Q
    |||||| |||||||||||||| |||||||||| |||||||  |||| ||||||||||||||| || |||| ||||||||| |||||||    
T  27028822 tgtatatgctataagctgttttcataagctatcttggagagcttatgaaaataagctgaaaatagcttatgaaaaatgtcctaagctg 27028909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 14 - 183
Target Start/End: Complemental strand, 43718018 - 43717846
Alignment:
Q  14 tttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaa-atgtc---ataagctgatttaaa 109  Q
    |||| ||||| |||||||||||| |||||||||| |||||||| |||| ||| |||||| ||||||| |||| |   |||||   |||  ||| ||| |     
T  43718018 tttggataagttataagctgtttgcataagctatcttggagaacttatgaaagtaagctaaaaacagcttatgagcgatgtcctcatagtctgttttcat 43717919  T
Q  110 aagtgttcccaaatagtcttaacaaagcttatgtcagtagataagctcaaatgagtcaatccaaaaaggcccta 183  Q
    ||||  ||||||||||||| | |||| ||||||||| ||||||||||||||| || ||||||||| ||||||||    
T  43717918 aagttctcccaaatagtctca-caaaacttatgtcaatagataagctcaaataagccaatccaaataggcccta 43717846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 79
Target Start/End: Complemental strand, 28769416 - 28769355
Alignment:
Q  18 tataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaaca 79  Q
    ||||||||||||||||||| |||||||||| ||||||| |||||  ||||||||||||||||    
T  28769416 tataagctataagctgttttcataagctattttggagagtttatggaaataagctgaaaaca 28769355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 4 - 101
Target Start/End: Complemental strand, 37353340 - 37353243
Alignment:
Q  4 ttaaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagct 101  Q
    ||||||| | ||||| || |||||||||||||| | |||||||| || ||||  |||| ||||||| ||||||||||||||| || ||||||||||||    
T  37353340 ttaaattgtttttgtgtatgctataagctgttttcttaagctatctttgagagcttatgaaaataatctgaaaacagtttatgaatatgtcataagct 37353243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 6 - 102
Target Start/End: Complemental strand, 6509392 - 6509296
Alignment:
Q  6 aaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagctg 102  Q
    ||||| ||||| ||||||||||||||||||| ||||||||||  ||||||  ||||  ||||||| |||||| ||||||||   |||||||||||||    
T  6509392 aaattgtatttatataagctataagctgttttcataagctatcctggagagcttattgaaataaggtgaaaatagtttataggcatgtcataagctg 6509296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 174
Target Start/End: Original strand, 11376696 - 11376852
Alignment:
Q  18 tataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagctgatttaaaaagtgttc 117  Q
    ||||||||||||| || || | |||||||| || |||||| ||| |||||||||||||||||   ||| || |||||| |||||  ||| | ||||  ||    
T  11376696 tataagctataagatgctttcttaagctattttagagaatctatgaaaataagctgaaaacaagatattaacatgtcacaagctattttcataagttctc 11376795  T
Q  118 ccaaatagtcttaacaaagcttatgtcagtagataagctcaaatgagtcaatccaaa 174  Q
    ||||||||||| |  | | ||||| ||||||||||||||||||| || |||| ||||    
T  11376796 ccaaatagtctcacaagaacttatatcagtagataagctcaaataagccaattcaaa 11376852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 26 - 113
Target Start/End: Complemental strand, 31716296 - 31716208
Alignment:
Q  26 ataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataagctgatttaaaaagt 113  Q
    ||||| ||| |||||||||||| |||||||| ||||| |||||||||||||| || |||| || |||||||||||||| ||| ||||||    
T  31716296 ataagatgtatccataagctatcttggagaagttatagaaataagctgaaaaaagcttatgaagaatgtcataagctgttttcaaaagt 31716208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 25 - 154
Target Start/End: Original strand, 1930035 - 1930164
Alignment:
Q  25 tataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataagctgatttaaaaagtgttcccaaat 123  Q
    |||||||||||| |||||||||| |||| ||  || | |||||||||||||||||| |||| || |||||||||| ||| ||| | ||||  ||||||||    
T  1930035 tataagctgttttcataagctatcttggtgaccttgtgaaaataagctgaaaacagcttatgaacaatgtcataaactgttttcacaagttctcccaaat 1930134  T
Q  124 agtcttaacaaagcttatgtcagtagataag 154  Q
    | |  | ||||| ||||||||||||||||||    
T  1930135 aat-gtcacaaaacttatgtcagtagataag 1930164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 26771241 - 26771398
Alignment:
Q  1 aacttaaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaat-gtcataag 99  Q
    |||||||||| | |||||||| |||||||||| |||  ||||| |||||| ||||| |||| |||||||| ||||||  | || | ||||| ||||||||    
T  26771241 aacttaaattgtttttgtatatgctataagctttttttataagatatattagagaacttatgaaaataagttgaaaaaggcttttgaaaattgtcataag 26771340  T
Q  100 ctgatttaaaaagtgttcccaaatagtcttaacaaagcttatgtcagtagataagctca 158  Q
    ||| ||| | ||||  ||||||| ||||| | |||| |||||| | |||||||||||||    
T  26771341 ctgttttcataagttctcccaaacagtctca-caaaacttatgcccgtagataagctca 26771398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 32 - 181
Target Start/End: Complemental strand, 35534676 - 35534527
Alignment:
Q  32 tgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaat-gtcataagctgatttaaaaagtgttcccaaatagtctta 130  Q
    ||||| |||||| |||||||||||| |||| ||| ||||| ||||| || || | ||||| ||||||||||| ||| | ||||  || |||| ||||| |    
T  35534676 tgttttcataagttatattggagaacttatgaaagtaagccgaaaaaagcttgttaaaattgtcataagctgttttcacaagttctctcaaacagtctca 35534577  T
Q  131 acaaagcttatgtcagtagataagctcaaatgagtcaatccaaaaaggccc 181  Q
     |||| ||||||| ||||||||||||||||| ||||| || ||| ||||||    
T  35534576 -caaaacttatgttagtagataagctcaaataagtcattctaaacaggccc 35534527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 131 - 181
Target Start/End: Original strand, 38602433 - 38602483
Alignment:
Q  131 acaaagcttatgtcagtagataagctcaaatgagtcaatccaaaaaggccc 181  Q
    ||||| ||||||||||||||||||||||||| |||||||||||| ||||||    
T  38602433 acaaaacttatgtcagtagataagctcaaataagtcaatccaaacaggccc 38602483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 79
Target Start/End: Original strand, 8062318 - 8062383
Alignment:
Q  14 tttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaaca 79  Q
    ||||||||||||||||||||||| |||||||||| || ||||  ||||  ||||||||||||||||    
T  8062318 tttgtataagctataagctgttttcataagctatcttagagagattatggaaataagctgaaaaca 8062383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 85
Target Start/End: Original strand, 2482854 - 2482923
Alignment:
Q  14 tttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat 85  Q
    ||||||||||||||||||||||| |||  ||||| ||||| || ||||| ||||||||||||||||| ||||    
T  2482854 tttgtataagctataagctgttttcat--gctatcttggataacttatagaaataagctgaaaacagcttat 2482923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 22 - 98
Target Start/End: Original strand, 7514810 - 7514885
Alignment:
Q  22 agctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataa 98  Q
    |||||||||||||||| |||||||||||||||||  ||||| ||||||| |||||| | |||||||| || ||||||    
T  7514810 agctataagctgtttcgataagctatattggagagcttatagaaataagttgaaaa-aatttataaacatatcataa 7514885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 29168146 - 29168023
Alignment:
Q  6 aaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctga-aaacagtttat-aaaaatgtcataagctga 103  Q
    ||||||| |||||||| |||||||||||||| | | |||||| |||||||| ||||  ||||||||||| ||||| ||||| ||||||||||||| |||     
T  29168146 aaattatttttgtatatgctataagctgttttcctgagctatcttggagaacttatggaaataagctgagaaaca-tttatgaaaaatgtcataatctgt 29168048  T
Q  104 tttaaaaagtgttcccaaatagtct 128  Q
    ||| | ||||  ||||||| |||||    
T  29168047 ttttataagttctcccaaacagtct 29168023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 61
Target Start/End: Complemental strand, 32841389 - 32841342
Alignment:
Q  14 tttgtataagctataagctgtttccataagctatattggagaatttat 61  Q
    ||||||||||||||||||||||| |||||||||| |||||||| ||||    
T  32841389 tttgtataagctataagctgttttcataagctatcttggagaagttat 32841342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 85
Target Start/End: Complemental strand, 33714317 - 33714246
Alignment:
Q  14 tttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat 85  Q
    |||||| || ||||||||| ||| |||||||||| | |||||  ||||||||||||||||||||||| ||||    
T  33714317 tttgtacaatctataagctattttcataagctatctgggagagcttataaaaataagctgaaaacagcttat 33714246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 88
Target Start/End: Original strand, 43504747 - 43504814
Alignment:
Q  21 aagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaa 88  Q
    |||||||||| |||||  ||||||||| |||||||| ||||  ||||||||||||||||| |||||||    
T  43504747 aagctataagatgtttttataagctatcttggagaacttatggaaataagctgaaaacagcttataaa 43504814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 80
Target Start/End: Original strand, 38602322 - 38602388
Alignment:
Q  14 tttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacag 80  Q
    |||| ||| ||||||||||||||  |||||||||| |||||||||| | ||||||||| ||||||||    
T  38602322 tttgcatatgctataagctgtttttataagctatactggagaatttgtgaaaataagccgaaaacag 38602388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 24 - 98
Target Start/End: Complemental strand, 41442524 - 41442450
Alignment:
Q  24 ctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataa 98  Q
    ||||||||||||| |||||||||||||||| || ||||| |  ||||||||||||||  ||| || |||||||||    
T  41442524 ctataagctgttttcataagctatattggaaaacttatataggtaagctgaaaacagcatatgaacatgtcataa 41442450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 99
Target Start/End: Original strand, 14905613 - 14905686
Alignment:
Q  26 ataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataag 99  Q
    |||| |||||| ||| |||||| ||||||||||||| |||| |||||| |||||  ||||||| ||||||||||    
T  14905613 ataaactgttttcattagctatcttggagaatttatgaaaacaagctgtaaacatcttataaacatgtcataag 14905686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 14 - 106
Target Start/End: Original strand, 18133645 - 18133738
Alignment:
Q  14 tttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataagctgattt 106  Q
    ||||||||  |||||||||| ||  |||| ||||||||||||| |||| ||||||||||||||| || || | |||| ||| ||||||||||||    
T  18133645 tttgtatatcctataagctggttttataaactatattggagaacttatgaaaataagctgaaaaaagcttgtgaaaattgttataagctgattt 18133738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 80
Target Start/End: Original strand, 27049349 - 27049421
Alignment:
Q  7 aattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacag 80  Q
    |||||| || ||||||||||||| || ||| |||||||||| |||||||| |||| |||||||| |||||||||    
T  27049349 aattattttcgtataagctataaacttttttcataagctat-ttggagaaattatgaaaataagatgaaaacag 27049421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 79
Target Start/End: Original strand, 33912126 - 33912187
Alignment:
Q  18 tataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaaca 79  Q
    |||||| |||||| ||||| ||||||| |||||| ||| |||||||| ||||||||||||||    
T  33912126 tataagttataagttgtttacataagccatattgcagagtttataaagataagctgaaaaca 33912187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 161
Target Start/End: Complemental strand, 1058122 - 1058011
Alignment:
Q  49 ttggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagctgatttaaaaagtgttcccaaatagtcttaacaaagcttatgtcagta 148  Q
    |||||||| |||| ||||||||| ||||| | |    ||||||||||||||| | ||| ||||||  ||||||| ||||| | |||| ||||||| ||||    
T  1058122 ttggagaacttatgaaaataagcggaaaaaactaatgaaaaatgtcataagcagttttcaaaagttctcccaaacagtctca-caaaacttatgtaagta 1058024  T
Q  149 gataagctcaaat 161  Q
    |||||||||||||    
T  1058023 gataagctcaaat 1058011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 9956891 - 9956831
Alignment:
Q  18 tataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaac 78  Q
    |||||| |||||| ||||| ||||| |||| |||||||| |||| ||||||||||||||||    
T  9956891 tataagttataagttgttttcataatctatcttggagaacttatgaaaataagctgaaaac 9956831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 102
Target Start/End: Original strand, 13459678 - 13459722
Alignment:
Q  58 ttataaaaataagctgaaaacagtttataaaaatgtcataagctg 102  Q
    |||| |||||| |||||||||||||||| ||||||||||||||||    
T  13459678 ttatgaaaataggctgaaaacagtttatgaaaatgtcataagctg 13459722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 79
Target Start/End: Original strand, 31916618 - 31916658
Alignment:
Q  39 ataagctatattggagaatttataaaaataagctgaaaaca 79  Q
    ||||||||| |||||||||||||||||||||||| ||||||    
T  31916618 ataagctatcttggagaatttataaaaataagctaaaaaca 31916658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 39 - 181
Target Start/End: Complemental strand, 3537001 - 3536859
Alignment:
Q  39 ataagctatattggagaatttataaaaataagctgaaaacagtttataaa-aatgtcataagctgatttaaaaagtgttcccaaatagtcttaacaaagc 137  Q
    ||||| ||| |||||||| ||||  |||||||||||||||| ||||| || |||||||||||||| ||    || |  || | |||||||  | ||||||    
T  3537001 ataagatatcttggagaacttatggaaataagctgaaaacaatttatgaacaatgtcataagctgtttctgtaaattctctcgaatagtcaca-caaagc 3536903  T
Q  138 ttatgtcagtagataagctcaaatgagtcaatccaaaaaggccc 181  Q
    ||||| |||||||||||||||||| || ||||| ||| ||||||    
T  3536902 ttatgccagtagataagctcaaataagacaatctaaataggccc 3536859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 24558832 - 24558883
Alignment:
Q  4 ttaaattatatttgtataagctataagctgtttccataagctatattggaga 55  Q
    ||||||||| || |||||||||||||| ||||| |||||||||| |||||||    
T  24558832 ttaaattattttcgtataagctataagttgttttcataagctatcttggaga 24558883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 101
Target Start/End: Original strand, 30389092 - 30389175
Alignment:
Q  18 tataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagct 101  Q
    ||||||||||| ||||||| |||||||| |  | ||||| |||| |||||||||||||||||  |||| || ||||||| ||||    
T  30389092 tataagctatacgctgttttcataagctttcctagagaacttatgaaaataagctgaaaacaacttatgaacatgtcattagct 30389175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 85
Target Start/End: Original strand, 31705078 - 31705145
Alignment:
Q  18 tataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat 85  Q
    ||||||||||||||||||| |||||||| |  | |||| |||||  ||||||||||||||||| ||||    
T  31705078 tataagctataagctgttttcataagctgtccttgagagtttatggaaataagctgaaaacagcttat 31705145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 174
Target Start/End: Original strand, 4560613 - 4560651
Alignment:
Q  136 gcttatgtcagtagataagctcaaatgagtcaatccaaa 174  Q
    |||||||||| ||||||||||||||| ||||||||||||    
T  4560613 gcttatgtcaatagataagctcaaataagtcaatccaaa 4560651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 100
Target Start/End: Original strand, 11795085 - 11795167
Alignment:
Q  18 tataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagc 100  Q
    |||||| ||||||||| || ||||||||||  ||||||  ||||  ||||||||||||||||| ||||  | |||||||||||    
T  11795085 tataagttataagctgatttcataagctattatggagagcttatggaaataagctgaaaacaggttatggacatgtcataagc 11795167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 70
Target Start/End: Original strand, 15180520 - 15180586
Alignment:
Q  4 ttaaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataag 70  Q
    ||||||||| |||||| | | |||||| |||||| |||||||||||||||||| || | ||||||||    
T  15180520 ttaaattatttttgtaaatgttataagttgtttctataagctatattggagaacttctgaaaataag 15180586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 30013211 - 30013277
Alignment:
Q  18 tataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagttta 84  Q
    ||||||||||||||||||| ||||||||||  || |||| | ||  |||||||||||||| ||||||    
T  30013211 tataagctataagctgttttcataagctatcctgtagaactaatggaaataagctgaaaatagttta 30013277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 51
Target Start/End: Original strand, 31891879 - 31891917
Alignment:
Q  13 atttgtataagctataagctgtttccataagctatattg 51  Q
    |||||||||||||||||| ||||| ||||||||||||||    
T  31891879 atttgtataagctataagttgttttcataagctatattg 31891917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 98
Target Start/End: Original strand, 34849086 - 34849176
Alignment:
Q  8 attatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataa 98  Q
    ||||| |||||||||| |||||||||||  |||||||| | ||| |||| ||||  |||| |||||||||| | |||| || |||||||||    
T  34849086 attatttttgtataagatataagctgttatcataagctttcttgtagaacttatggaaatcagctgaaaacggcttatgaacatgtcataa 34849176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 77
Target Start/End: Complemental strand, 44236887 - 44236841
Alignment:
Q  31 ctgtttccataagctatattggagaatttataaaaataagctgaaaa 77  Q
    |||||| ||||||||||||||||||  |||| |||||||||||||||    
T  44236887 ctgttttcataagctatattggagagcttatgaaaataagctgaaaa 44236841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 99
Target Start/End: Complemental strand, 3161660 - 3161619
Alignment:
Q  58 ttataaaaataagctgaaaacagtttataaaaatgtcataag 99  Q
    |||||||||||||||||||||| ||||| || ||||||||||    
T  3161660 ttataaaaataagctgaaaacattttatgaacatgtcataag 3161619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 135 - 176
Target Start/End: Original strand, 11183653 - 11183694
Alignment:
Q  135 agcttatgtcagtagataagctcaaatgagtcaatccaaaaa 176  Q
    ||||| ||||||||||||||||||||| || |||||||||||    
T  11183653 agcttttgtcagtagataagctcaaataagccaatccaaaaa 11183694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 25 - 102
Target Start/End: Complemental strand, 11569527 - 11569450
Alignment:
Q  25 tataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagctg 102  Q
    |||||||||||| ||||||||||  ||||||  || | |||||||||||||||||  ||||  | |||||||||||||    
T  11569527 tataagctgttttcataagctatcatggagagattttgaaaataagctgaaaacaacttatgtacatgtcataagctg 11569450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 39 - 100
Target Start/End: Original strand, 20672764 - 20672825
Alignment:
Q  39 ataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagc 100  Q
    |||||||||  ||||||  |||| |||||||||||||||||| |||| || |||||||||||    
T  20672764 ataagctatcctggagagcttatgaaaataagctgaaaacagcttatgaacatgtcataagc 20672825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 15 - 80
Target Start/End: Complemental strand, 36338342 - 36338277
Alignment:
Q  15 ttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacag 80  Q
    ||||||||| ||||||||||||  ||||  ||| || ||||| |||| ||||||||||||||||||    
T  36338342 ttgtataagatataagctgtttttataaaatatctttgagaacttatgaaaataagctgaaaacag 36338277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 174
Target Start/End: Original strand, 2606162 - 2606198
Alignment:
Q  138 ttatgtcagtagataagctcaaatgagtcaatccaaa 174  Q
    |||||||||||||||||||| ||| ||||||||||||    
T  2606162 ttatgtcagtagataagctcgaataagtcaatccaaa 2606198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 102
Target Start/End: Complemental strand, 7878555 - 7878519
Alignment:
Q  66 ataagctgaaaacagtttataaaaatgtcataagctg 102  Q
    ||||||||||||||||||||| | |||||||||||||    
T  7878555 ataagctgaaaacagtttatagacatgtcataagctg 7878519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 128
Target Start/End: Original strand, 27754403 - 27754507
Alignment:
Q  24 ctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagctgatttaaaaagtgttcccaaat 123  Q
    |||||||  |||| |||||||||| |||||||  |||| |||||||||||||  ||  ||||||  ||||||||| ||| ||| | ||||  ||||||||    
T  27754403 ctataagtggttttcataagctattttggagagcttatgaaaataagctgaacgcaacttataatcatgtcataaactgttttcataagttctcccaaat 27754502  T
Q  124 agtct 128  Q
    |||||    
T  27754503 agtct 27754507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 85
Target Start/End: Original strand, 31862485 - 31862553
Alignment:
Q  17 gtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat 85  Q
    |||||||||||||| ||||| |||||| |||  | ||||  |||| |||||||||||||||||| ||||    
T  31862485 gtataagctataagatgttttcataagttatcctagagagcttatgaaaataagctgaaaacagcttat 31862553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 31884587 - 31884650
Alignment:
Q  18 tataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtt 82  Q
    ||||||||||||  ||||| ||||||||||  |||||| |||| | |||||||||||||||||||    
T  31884587 tataagctataaattgttttcataagctatcatggagagttta-ataaataagctgaaaacagtt 31884650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 183
Target Start/End: Complemental strand, 35644039 - 35643900
Alignment:
Q  44 ctatattggagaatttataaaaataagctgaaaacagtttataaaaat-gtcataagctgatttaaaaagtgttcccaaatagtcttaacaaagcttatg 142  Q
    ||||||||||||  |||| |||||||| |||||| || |||| ||||| ||||||| ||  ||| | ||||  ||||||| ||||| | ||||  |||||    
T  35644039 ctatattggagagcttatgaaaataagttgaaaaaagcttatgaaaattgtcataaactattttcataagttatcccaaacagtctca-caaaaattatg 35643941  T
Q  143 tcagtagataagctcaaatgagtcaatccaaaaaggcccta 183  Q
     |||||||||||| ||||| || |||||| || ||||||||    
T  35643940 ccagtagataagcccaaataagccaatcccaacaggcccta 35643900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 102
Target Start/End: Complemental strand, 42215387 - 42215299
Alignment:
Q  14 tttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagctg 102  Q
    ||||||||| |||||| || ||| |||| |||||  ||||||  ||||  ||||||||||||||||| |||| || | |||||||||||    
T  42215387 tttgtataatctataacctattttcatatgctatcctggagagcttatgtaaataagctgaaaacagcttatgaacaagtcataagctg 42215299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 7e-18; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 20 - 102
Target Start/End: Original strand, 31624085 - 31624167
Alignment:
Q  20 taagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagctg 102  Q
    ||||||||||||||||| |||| ||||| |||||||| |||| |||||||| ||||||||| |||| || |||||||||||||    
T  31624085 taagctataagctgttttcataggctatcttggagaaattatgaaaataagttgaaaacagcttatgaacatgtcataagctg 31624167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 4 - 100
Target Start/End: Original strand, 2735048 - 2735145
Alignment:
Q  4 ttaaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataagc 100  Q
    ||||||||| ||||||||| ||||||||||||| ||||||| || ||| | || |||| ||||||||| |||||||| |||| |||||||||||||||    
T  2735048 ttaaattatttttgtataatctataagctgttttcataagcaatcttgaacaacttatgaaaataagccgaaaacagcttatgaaaaatgtcataagc 2735145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 14 - 149
Target Start/End: Complemental strand, 20368261 - 20368127
Alignment:
Q  14 tttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagctgatttaaaaagt 113  Q
    ||||||| || |||||| ||||| |||||||| | |||||||| |||| |||||||| |||||  || |||| || |||||||||| || ||| | ||||    
T  20368261 tttgtatgagttataagttgttttcataagctttcttggagaacttatgaaaataagttgaaactagcttatgaacatgtcataagttgttttcataagt 20368162  T
Q  114 gttcccaaatagtcttaacaaagcttatgtcagtag 149  Q
      |||||||||||||| ||||| |||||||||||||    
T  20368161 tctcccaaatagtctt-acaaaacttatgtcagtag 20368127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 101
Target Start/End: Complemental strand, 9093647 - 9093549
Alignment:
Q  4 ttaaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagttta-taaaaatgtcataagct 101  Q
    ||||||| | || |||||||||||||||||||| |||||||| | || ||||| |||  |||||||||||||||||| ||| ||| |||||||||||||    
T  9093647 ttaaattgttttcgtataagctataagctgttttcataagctgtcttagagaacttaagaaaataagctgaaaacaggttattaacaatgtcataagct 9093549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 14 - 102
Target Start/End: Complemental strand, 34430542 - 34430453
Alignment:
Q  14 tttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataagctg 102  Q
    |||||||| | |||||| ||||| |||||||||| |||||||| |||| ||||||||||||||| || |||| | |||||||||||||||    
T  34430542 tttgtatatgttataaggtgttttcataagctatcttggagaagttatgaaaataagctgaaaaaagcttatgataaatgtcataagctg 34430453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 91
Target Start/End: Original strand, 6536604 - 6536681
Alignment:
Q  14 tttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaat 91  Q
    |||||||| |||||||| |||||  | ||||||||||||||||||||| |||||||| |||||| || |||| |||||    
T  6536604 tttgtatatgctataagttgtttttagaagctatattggagaatttatgaaaataagttgaaaaaagcttatgaaaat 6536681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 23 - 79
Target Start/End: Complemental strand, 835321 - 835265
Alignment:
Q  23 gctataagctgtttccataagctatattggagaatttataaaaataagctgaaaaca 79  Q
    ||||||||| |||| |||||||||| |||||||| |||| |||||||||||||||||    
T  835321 gctataagcagttttcataagctatcttggagaacttatgaaaataagctgaaaaca 835265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 11784121 - 11784069
Alignment:
Q  4 ttaaattatatttgtataagctataagctgtttccataagctatattggagaa 56  Q
    ||||||| | |||||||| |||||||||||||| |||||||||||||||||||    
T  11784121 ttaaattgtttttgtatatgctataagctgttttcataagctatattggagaa 11784069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 106
Target Start/End: Complemental strand, 14926871 - 14926779
Alignment:
Q  14 tttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagctgattt 106  Q
    |||||||| | ||||||||||||||| ||||||| ||||| |  ||||||||||||| | |||  ||||||| ||| ||||||||| ||||||    
T  14926871 tttgtatatgttataagctgtttccaaaagctatcttggacagcttataaaaataagtttaaataagtttatgaaactgtcataagttgattt 14926779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 174
Target Start/End: Original strand, 24982696 - 24982854
Alignment:
Q  16 tgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagttta-taaaaatgtcataagctgatttaaaaagtg 114  Q
    |||||| |||||||||||||| |||||| ||| |||||||| |||| |   |||||| |||| || | | |||||||||||||||||| | | ||| ||     
T  24982696 tgtatatgctataagctgttttcataagttattttggagaacttatgagggtaagctaaaaaaagctcattaaaaatgtcataagctgttctcaaatgtt 24982795  T
Q  115 ttcccaaatagtcttaacaaagcttatgtcagtagataagctcaaatgagtcaatccaaa 174  Q
     ||| ||| |||| | ||||| ||||||| |||||||||| || ||| ||||||||||||    
T  24982796 ctccaaaacagtc-tcacaaaacttatgttagtagataagatctaattagtcaatccaaa 24982854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 99
Target Start/End: Complemental strand, 10616790 - 10616709
Alignment:
Q  17 gtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataag 99  Q
    ||||||||||||||||||||   |||| ||| || ||| |||||||||||||| |||||||||| |||| || ||||||||||    
T  10616790 gtataagctataagctgttttt-taagttatcttagaggatttataaaaataaactgaaaacagcttatgaacatgtcataag 10616709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 97
Target Start/End: Original strand, 415283 - 415376
Alignment:
Q  4 ttaaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcata 97  Q
    ||||||| | || |||||||||||||| |||||  |||||||||| ||||||| ||||  ||  ||||||||||||| |||| || ||||||||    
T  415283 ttaaattgttttcgtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaacagattatgaacatgtcata 415376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 25 - 161
Target Start/End: Original strand, 2455259 - 2455395
Alignment:
Q  25 tataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaa-aatgtcataagctgatttaaaaagtgttcccaaat 123  Q
    |||||||||||| |||| || || |||||||| || | |||||||||||||||||  ||||||| ||||| ||||| || ||| | ||||  || |||||    
T  2455259 tataagctgttttcatatgcaatcttggagaagttgtgaaaataagctgaaaacaacttataaacaatgtaataagttgttttcataagttctctcaaat 2455358  T
Q  124 agtcttaacaaagcttatgtcagtagataagctcaaat 161  Q
    ||| || || || |||||||  ||||||||||||||||    
T  2455359 agt-ttcaccaaacttatgtttgtagataagctcaaat 2455395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 102
Target Start/End: Complemental strand, 2027483 - 2027399
Alignment:
Q  18 tataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagctg 102  Q
    ||||| ||||||||||||  |||||||||   || ||| |||| | ||||||||||||||||| ||||  |||||||||||||||    
T  2027483 tataacctataagctgttctcataagctagcatgtagagtttaaataaataagctgaaaacagcttatggaaatgtcataagctg 2027399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 183
Target Start/End: Complemental strand, 21405118 - 21405066
Alignment:
Q  131 acaaagcttatgtcagtagataagctcaaatgagtcaatccaaaaaggcccta 183  Q
    ||||| |||||||||||| |||||||||||| |||||||||||| || |||||    
T  21405118 acaaaacttatgtcagtatataagctcaaataagtcaatccaaacagacccta 21405066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 80
Target Start/End: Complemental strand, 31624996 - 31624956
Alignment:
Q  40 taagctatattggagaatttataaaaataagctgaaaacag 80  Q
    ||||||||||||||||| |||| ||||||||||||||||||    
T  31624996 taagctatattggagaacttatgaaaataagctgaaaacag 31624956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 85
Target Start/End: Original strand, 4246403 - 4246470
Alignment:
Q  18 tataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat 85  Q
    ||||| ||||||||||||| ||||||||||  ||||||   |||||||||||| ||||||||| ||||    
T  4246403 tataatctataagctgttttcataagctattatggagagcatataaaaataagttgaaaacagcttat 4246470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 75
Target Start/End: Complemental strand, 6909963 - 6909892
Alignment:
Q  4 ttaaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaa 75  Q
    ||||||| | |||||||| |||||||| ||||| |||||  ||| ||||||||||||| ||| |||||||||    
T  6909963 ttaaattgtttttgtatatgctataagttgttttcataacatatcttggagaatttatgaaattaagctgaa 6909892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 53
Target Start/End: Original strand, 9604830 - 9604877
Alignment:
Q  6 aaattatatttgtataagctataagctgtttccataagctatattgga 53  Q
    ||||||| ||||||||||||||||||||||| |||||| ||| |||||    
T  9604830 aaattatttttgtataagctataagctgttttcataagttattttgga 9604877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 44 - 102
Target Start/End: Complemental strand, 9912242 - 9912183
Alignment:
Q  44 ctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataagctg 102  Q
    ||||||||||||| |||| |||||||||| ||||||| |||| || ||||||||||||||    
T  9912242 ctatattggagaacttatgaaaataagctcaaaacagcttatgaacaatgtcataagctg 9912183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 131 - 182
Target Start/End: Complemental strand, 35069576 - 35069525
Alignment:
Q  131 acaaagcttatgtcagtagataagctcaaatgagtcaatccaaaaaggccct 182  Q
    ||||| ||||||||||||||||||||||||| || |||| |||| |||||||    
T  35069576 acaaaacttatgtcagtagataagctcaaataagccaatacaaacaggccct 35069525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 8365053 - 8364975
Alignment:
Q  18 tataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcat 96  Q
    |||||| ||||| |||||| ||||||||||  ||| ||| | || |||||||||||||||||| || |||| |||||||    
T  8365053 tataagttataaactgttttcataagctatcatggtgaactgatgaaaataagctgaaaacagcttgtaaacatgtcat 8364975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 283087 - 283172
Alignment:
Q  17 gtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagctg 102  Q
    ||||||||||||| |||||| |||| ||||| || |  |  ||||| |||||||||||||| |||||||  | |||||||||||||    
T  283087 gtataagctataatctgtttgcataggctatcttcggaagcttatagaaataagctgaaaatagtttatggacatgtcataagctg 283172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 20 - 77
Target Start/End: Complemental strand, 837291 - 837234
Alignment:
Q  20 taagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaa 77  Q
    |||||||||||  |||| ||| |||||| |||||||| |||| |||||||||||||||    
T  837291 taagctataagtagttttcattagctatcttggagaacttatgaaaataagctgaaaa 837234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 99
Target Start/End: Original strand, 1402989 - 1403070
Alignment:
Q  18 tataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataag 99  Q
    ||||||||||||  ||||| ||||||||||  ||||||  ||||| |||| ||||||| | |||||||| | ||||||||||    
T  1402989 tataagctataaattgttttcataagctatcatggagatcttatagaaattagctgaatatagtttatagatatgtcataag 1403070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 14 - 79
Target Start/End: Complemental strand, 9109332 - 9109267
Alignment:
Q  14 tttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaaca 79  Q
    ||||||||||||||||||||||| ||| | |||  ||||||||  ||| |||||||| ||||||||    
T  9109332 tttgtataagctataagctgttttcattaactaatttggagaacctatgaaaataaggtgaaaaca 9109267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 59
Target Start/End: Original strand, 10016538 - 10016579
Alignment:
Q  18 tataagctataagctgtttccataagctatattggagaattt 59  Q
    ||||||| ||||||||||| |||||||||| |||||||||||    
T  10016538 tataagccataagctgttttcataagctatgttggagaattt 10016579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 136 - 181
Target Start/End: Original strand, 12111078 - 12111123
Alignment:
Q  136 gcttatgtcagtagataagctcaaatgagtcaatccaaaaaggccc 181  Q
    |||||||  ||||||||||||||||| |||||||||||| ||||||    
T  12111078 gcttatgctagtagataagctcaaataagtcaatccaaataggccc 12111123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 35 - 155
Target Start/End: Original strand, 31813171 - 31813291
Alignment:
Q  35 ttccataagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataagctgatttaaaaagtgttcccaaatagtcttaaca 133  Q
    ||||||||||||| ||||||||  ||| |||||||||||||||| | |||| || ||| ||||||||   ||| | ||||  |||||||||||| | |||    
T  31813171 ttccataagctatcttggagaacatatgaaaataagctgaaaacggcttatgaacaatctcataagcaattttcataagttctcccaaatagtc-tcaca 31813269  T
Q  134 aagcttatgtcagtagataagc 155  Q
    || |||||| ||||| ||||||    
T  31813270 aaacttatgccagtaaataagc 31813291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 59
Target Start/End: Complemental strand, 33075034 - 33074993
Alignment:
Q  18 tataagctataagctgtttccataagctatattggagaattt 59  Q
    ||||||| ||||||||||| |||||||||| |||||||||||    
T  33075034 tataagcaataagctgttttcataagctattttggagaattt 33074993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 101
Target Start/End: Original strand, 6647387 - 6647463
Alignment:
Q  25 tataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagct 101  Q
    ||||| |||||| |||||||||| || ||||  |||| |||||||| ||||||||  |||| || ||||||||||||    
T  6647387 tataatctgttttcataagctatcttagagagcttatgaaaataagttgaaaacatcttatgaacatgtcataagct 6647463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 77
Target Start/End: Complemental strand, 19800518 - 19800454
Alignment:
Q  13 atttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaa 77  Q
    |||||||||||||||||| | ||| ||||||||||  | || || |||| |||||||||||||||    
T  19800518 atttgtataagctataagttttttacataagctatcctagaaaaattatgaaaataagctgaaaa 19800454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 39 - 79
Target Start/End: Complemental strand, 29754155 - 29754115
Alignment:
Q  39 ataagctatattggagaatttataaaaataagctgaaaaca 79  Q
    |||| ||||||||||||| ||||||||||||| ||||||||    
T  29754155 ataaactatattggagaacttataaaaataagttgaaaaca 29754115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 137 - 181
Target Start/End: Complemental strand, 30536923 - 30536879
Alignment:
Q  137 cttatgtcagtagataagctcaaatgagtcaatccaaaaaggccc 181  Q
    ||||||| ||||||||| ||||||| |||||||||||| ||||||    
T  30536923 cttatgtaagtagataaactcaaataagtcaatccaaacaggccc 30536879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 102
Target Start/End: Original strand, 34939757 - 34939821
Alignment:
Q  38 cataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagctg 102  Q
    ||||||||||  |||||| |||||  |||||||||||||||| |||||  | |||||||||||||    
T  34939757 cataagctatcctggagagtttatggaaataagctgaaaacaatttatggacatgtcataagctg 34939821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 102
Target Start/End: Original strand, 22210 - 22309
Alignment:
Q  4 ttaaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagttta-taaaaatgtcataagctg 102  Q
    ||||||||| ||||||||  ||||||||||||  |||||||||| ||||| || |||| ||||||||||||||| || |||  |||| ||||||||||||    
T  22210 ttaaattatctttgtatatactataagctgttatcataagctatgttggaaaacttatgaaaataagctgaaaaaagcttacgaaaattgtcataagctg 22309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 25 - 85
Target Start/End: Complemental strand, 21355 - 21296
Alignment:
Q  25 tataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat 85  Q
    |||||||||||| ||||||||||||||||||| |||| ||||||| || ||||||||||||    
T  21355 tataagctgttttcataagctatattggagaaattatgaaaataaact-aaaacagtttat 21296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 78
Target Start/End: Complemental strand, 178416 - 178342
Alignment:
Q  4 ttaaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaac 78  Q
    |||||||||  | ||||||||||| |||||||| || |||| || || ||||| |||| ||||||||||||||||    
T  178416 ttaaattattgtcgtataagctattagctgttttcacaagccatctttgagaacttatgaaaataagctgaaaac 178342  T

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