View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19163_high_40 (Length: 251)
Name: NF19163_high_40
Description: NF19163
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19163_high_40 |
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Alignment Details
Target: chr6 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 1726600 - 1726834
Alignment:
| Q |
1 |
aaattcaaattcatttaacattatcataaaaaagnnnnnnncacccttaggttattaagtcccaccatatataatggtacattcactccaccaaaaacac |
100 |
Q |
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| T |
1726600 |
aaattcaaatttatttaacattatcataaaaaagttattttcacccttaggttattaagtcccaccatatataatggtacattcactccaccaaaaacac |
1726699 |
T |
|
| Q |
101 |
tagaagaatgatacttctttagagagcaatgtacattattctaacatgtagcgtgtgtttaccaagtttagtaggtggtaactattcggttcaagtaaag |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
1726700 |
tagaagaatgatacttctttagagagcaatgtacattattctaacatgtagcgtgtgtttaccaagtttagtaggtggtaactattcggttcaaataaag |
1726799 |
T |
|
| Q |
201 |
taaatagtaaaaaattcaaatcgtgactctatcaa |
235 |
Q |
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||||||||||||||||||||||||||||||||||| |
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| T |
1726800 |
taaatagtaaaaaattcaaatcgtgactctatcaa |
1726834 |
T |
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