View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF19163_low_16 (Length: 383)
Name: NF19163_low_16
Description: NF19163
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19163_low_16 |
 | |
|
| [»] scaffold0640 (1 HSPs) |
| | |
|
| [»] scaffold0271 (1 HSPs) |
| | |
|
| [»] scaffold0648 (1 HSPs) |
| | |
|
| [»] scaffold0274 (2 HSPs) |
| | |
|
Alignment Details
Target: chr3 (Bit Score: 343; Significance: 0; HSPs: 30)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 343; E-Value: 0
Query Start/End: Original strand, 10 - 364
Target Start/End: Original strand, 19381837 - 19382191
Alignment:
| Q |
10 |
aagaatatgtgtatgatgtaaacccggataggcgaactattgacctttcatccaatagcttgtctggagaattgccattggaattgtttcgacttgttca |
109 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| |||||||| |
|
|
| T |
19381837 |
aagaatatgtgtatgatgtaaacccggataggcgaactattgacctttcacccaatagcttgtctggagaaatgccattggaattgtttcggcttgttca |
19381936 |
T |
|
| Q |
110 |
agttcaaacattgaacttatctcacaataatttcattggaacaattccaaagacgattggaggcatgataaatatggaatctctcgatctctctaataat |
209 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19381937 |
agttcaaacattgaacttatctcacaataatttcattggaacaattccaaagacgattggaggcatgataaatatggaatctctcgatctctctaataat |
19382036 |
T |
|
| Q |
210 |
aagttttttggtgaaattcctcaaagcatggctctcttaaactttttggaggtgttgaatttatcttgcaataattttgatggaaaaatcccaacaggaa |
309 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19382037 |
aagttttttggtgaaattcctcaaagcatggctctcttaaactttttggaggtgttgaatttatcttgcaataattttgatggaaaaatcccaacaggaa |
19382136 |
T |
|
| Q |
310 |
ctcaacttcaaagttttaatgcatcaagttatattgggaatcctaaactatgcgg |
364 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19382137 |
ctcaacttcaaagttttaatgcatcaagttatattgggaatcctaaactatgcgg |
19382191 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 42 - 364
Target Start/End: Original strand, 19465329 - 19465650
Alignment:
| Q |
42 |
cgaactattgacctttcatccaatagcttgtctggagaattgccattggaattgtttcgacttgttcaagttcaaacattgaacttatctcacaataatt |
141 |
Q |
| |
|
||||||||||||||| || |||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
19465329 |
cgaactattgaccttccagccaatagcttgtctggagaagtgccattggaattgtttcggcttgttcaagttcaaacattgaacttatctcacaatagtt |
19465428 |
T |
|
| Q |
142 |
tcattggaacaattccaaagacgattggaggcatgataaatatggaatctctcgatctctctaataataagttttttggtgaaattcctcaaagcatggc |
241 |
Q |
| |
|
| | ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
19465429 |
tgactggaacaattccaaaaacgattggaggcatgattaatatggaatctctcgatctctctaataataagttttttggtgaaattcctcagagcatggc |
19465528 |
T |
|
| Q |
242 |
tctcttaaactttttggaggtgttgaatttatcttgcaataattttgatggaaaaatcccaacaggaactcaacttcaaagttttaatgcatcaagttat |
341 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||| |||||||||| |
|
|
| T |
19465529 |
tctc-taaactttttggaggtgttgaatttatcttgcaataattttgatggaaaaattccaataggaactcaacttcaaagttttaatgtatcaagttat |
19465627 |
T |
|
| Q |
342 |
attgggaatcctaaactatgcgg |
364 |
Q |
| |
|
||||||||||||||||||||||| |
|
|
| T |
19465628 |
attgggaatcctaaactatgcgg |
19465650 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 15 - 364
Target Start/End: Original strand, 18016971 - 18017320
Alignment:
| Q |
15 |
tatgtgtatgatgtaaacccggataggcgaactattgacctttcatccaatagcttgtctggagaattgccattggaattgtttcgacttgttcaagttc |
114 |
Q |
| |
|
||||||| |||||| |||||||||||||||||||||||||||||| ||||| |||| |||||||| ||||||||||||||||||| ||||||||||||| |
|
|
| T |
18016971 |
tatgtgtgtgatgttaacccggataggcgaactattgacctttcagccaatcacttgactggagaagtgccattggaattgtttcggcttgttcaagttc |
18017070 |
T |
|
| Q |
115 |
aaacattgaacttatctcacaataatttcattggaacaattccaaagacgattggaggcatgataaatatggaatctctcgatctctctaataataagtt |
214 |
Q |
| |
|
|| |||| |||||||||||||||| ||||| ||||||||||| ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| |
|
|
| T |
18017071 |
aatcattaaacttatctcacaatagtttcaaaggaacaattccgaagacgattggaggcatgaaaaaaatggaatctctcgatctctctaataataagtt |
18017170 |
T |
|
| Q |
215 |
ttttggtgaaattcctcaaagcatggctctcttaaactttttggaggtgttgaatttatcttgcaataattttgatggaaaaatcccaacaggaactcaa |
314 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18017171 |
ttttggtgaaattcctcagagcatggctctcttaaactttttgggggtgttgaatttatcttgcaataattttgatggaaaaatcccaacaggaactcaa |
18017270 |
T |
|
| Q |
315 |
cttcaaagttttaatgcatcaagttatattgggaatcctaaactatgcgg |
364 |
Q |
| |
|
||||||||| | ||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
18017271 |
cttcaaagtcgtgatgcatcaagttatattgggaatcctaaactgtgcgg |
18017320 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 18 - 361
Target Start/End: Original strand, 17942906 - 17943249
Alignment:
| Q |
18 |
gtgtatgatgtaaacccggataggcgaactattgacctttcatccaatagcttgtctggagaattgccattggaattgtttcgacttgttcaagttcaaa |
117 |
Q |
| |
|
|||||| |||| | |||| | |||||||| ||||||||||| ||||| ||| | ||||||| | ||||||||||||||||| ||| |||||||||||| |
|
|
| T |
17942906 |
gtgtattatgttagcccgaacaggcgaacgattgacctttcggtcaataacttatttggagaagttccattggaattgtttcggcttattcaagttcaaa |
17943005 |
T |
|
| Q |
118 |
cattgaacttatctcacaataatttcattggaacaattccaaagacgattggaggcatgataaatatggaatctctcgatctctctaataataagttttt |
217 |
Q |
| |
|
||||||||||||||||||||||||| | ||||| |||||||||||| ||||||||||||| ||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
17943006 |
cattgaacttatctcacaataatttgactggaagaattccaaagaccattggaggcatgacaaatatggaatctctagatctctctaataataagttttt |
17943105 |
T |
|
| Q |
218 |
tggtgaaattcctcaaagcatggctctcttaaactttttggaggtgttgaatttatcttgcaataattttgatggaaaaatcccaacaggaactcaactt |
317 |
Q |
| |
|
||||||||||||||| ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
17943106 |
tggtgaaattcctcagagcatggctctcttaaattttttgggggtgttgaatttatcttgcaataattttgatggaaaaatcccaattggaactcaactt |
17943205 |
T |
|
| Q |
318 |
caaagttttaatgcatcaagttatattgggaatcctaaactatg |
361 |
Q |
| |
|
||||||||||||||||| ||||| |||||||||||||||||||| |
|
|
| T |
17943206 |
caaagttttaatgcatcgagttacattgggaatcctaaactatg |
17943249 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 33 - 361
Target Start/End: Original strand, 19394116 - 19394444
Alignment:
| Q |
33 |
ccggataggcgaactattgacctttcatccaatagcttgtctggagaattgccattggaattgtttcgacttgttcaagttcaaacattgaacttatctc |
132 |
Q |
| |
|
||||||||||||||| ||||||||||| |||||||||||||||||||| ||||||||||||| ||||| ||| ||||||||||||| || || |||||| |
|
|
| T |
19394116 |
ccggataggcgaactgttgacctttcagccaatagcttgtctggagaagtgccattggaattatttcggcttattcaagttcaaacgttaaatctatctc |
19394215 |
T |
|
| Q |
133 |
acaataatttcattggaacaattccaaagacgattggaggcatgataaatatggaatctctcgatctctctaataataagttttttggtgaaattcctca |
232 |
Q |
| |
|
|||||||||||||||||||||| || || |||||||||||||||| |||| |||||||||||||||| || ||||||||||||| ||||||||||||||| |
|
|
| T |
19394216 |
acaataatttcattggaacaataccgaacacgattggaggcatgaaaaatttggaatctctcgatctttccaataataagttttatggtgaaattcctca |
19394315 |
T |
|
| Q |
233 |
aagcatggctctcttaaactttttggaggtgttgaatttatcttgcaataattttgatggaaaaatcccaacaggaactcaacttcaaagttttaatgca |
332 |
Q |
| |
|
|||||||||||||||||||||||||| |||||| |||||| ||| |||||||| ||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
19394316 |
aagcatggctctcttaaactttttgggttatttgaatctatcttacaacaattttgacggaaaaatcccaataggaactcaacttcaaagttttaatgca |
19394415 |
T |
|
| Q |
333 |
tcaagttatattgggaatcctaaactatg |
361 |
Q |
| |
|
|| |||||||||||||||||||||||||| |
|
|
| T |
19394416 |
tcgagttatattgggaatcctaaactatg |
19394444 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 23 - 361
Target Start/End: Original strand, 19352349 - 19352687
Alignment:
| Q |
23 |
tgatgtaaacccggataggcgaactattgacctttcatccaatagcttgtctggagaattgccattggaattgtttcgacttgttcaagttcaaacattg |
122 |
Q |
| |
|
|||||| |||||| ||||||||||| |||||||||||||||||||||||||||||||| | ||||||||||||||||| |||| |||| ||||||| || |
|
|
| T |
19352349 |
tgatgttaacccgcataggcgaactgttgacctttcatccaatagcttgtctggagaagttccattggaattgtttcggcttgctcaacttcaaacgtta |
19352448 |
T |
|
| Q |
123 |
aacttatctcacaataatttcattggaacaattccaaagacgattggaggcatgataaatatggaatctctcgatctctctaataataagttttttggtg |
222 |
Q |
| |
|
||||||| |||||| ||||| ||||||||||| ||||| |||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19352449 |
aacttatatcacaacaatttgattggaacaataccaaaagagattggaggcatgaaaaatgtggaatctctcgatctctctaataataagttttttggtg |
19352548 |
T |
|
| Q |
223 |
aaattcctcaaagcatggctctcttaaactttttggaggtgttgaatttatcttgcaataattttgatggaaaaatcccaacaggaactcaacttcaaag |
322 |
Q |
| |
|
||||||| || | |||||||| | |||||||||| ||||| || |||||||||||||||||||| |||||||||||||||| ||||| ||||||||||| |
|
|
| T |
19352549 |
aaattccgcagaccatggctcgcctaaactttttagaggttttaaatttatcttgcaataatttcaatggaaaaatcccaactggaacacaacttcaaag |
19352648 |
T |
|
| Q |
323 |
ttttaatgcatcaagttatattgggaatcctaaactatg |
361 |
Q |
| |
|
|||||||||||||||||| ||||||||||||| |||||| |
|
|
| T |
19352649 |
ttttaatgcatcaagttacattgggaatcctagactatg |
19352687 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 10 - 364
Target Start/End: Original strand, 19376566 - 19376920
Alignment:
| Q |
10 |
aagaatatgtgtatgatgtaaacccggataggcgaactattgacctttcatccaatagcttgtctggagaattgccattggaattgtttcgacttgttca |
109 |
Q |
| |
|
||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
19376566 |
aagaatatgtgtatgatgttaagccggataggcgaactattgacctttcatccaatagcttgtctggagaattgccattggaattgtttcaccttgttca |
19376665 |
T |
|
| Q |
110 |
agttcaaacattgaacttatctcacaataatttcattggaacaattccaaagacgattggaggcatgataaatatggaatctctcgatctctctaataat |
209 |
Q |
| |
|
||||||||| || |||||||||||||||||||| |||||||||| ||||| |||||| |||||| |||||||||||||| || ||||||| |||| |
|
|
| T |
19376666 |
agttcaaacgttaaacttatctcacaataattttgttggaacaataccaaaagatattggatgcatgaagaatatggaatctcttgacctctctagtaat |
19376765 |
T |
|
| Q |
210 |
aagttttttggtgaaattcctcaaagcatggctctcttaaactttttggaggtgttgaatttatcttgcaataattttgatggaaaaatcccaacaggaa |
309 |
Q |
| |
|
||||||| ||||||||||||||| | |||| || |||||| |||||||| |||||| |||||| ||| ||||||||||||||||| |||| ||||| |
|
|
| T |
19376766 |
aagttttatggtgaaattcctcagaccatgtctatcttaacctttttgggttatttgaatctatcttacaacaattttgatggaaaaattccaataggaa |
19376865 |
T |
|
| Q |
310 |
ctcaacttcaaagttttaatgcatcaagttatattgggaatcctaaactatgcgg |
364 |
Q |
| |
|
||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| |
|
|
| T |
19376866 |
ctcaacttcaaagttttaatgcatcgagttacattgggaatcctaaactatgcgg |
19376920 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 10 - 361
Target Start/End: Original strand, 18166100 - 18166451
Alignment:
| Q |
10 |
aagaatatgtgtatgatgtaaacccggataggcgaactattgacctttcatccaatagcttgtctggagaattgccattggaattgtttcgacttgttca |
109 |
Q |
| |
|
|||| |||||||||||||| |||||||| ||||||||||||||| ||||| ||||||||||||||||||| | ||||||||| ||||||| |||||||| |
|
|
| T |
18166100 |
aagattatgtgtatgatgttaacccggaaaggcgaactattgacatttcaaacaatagcttgtctggagaagtaccattggaaatgtttcggcttgttca |
18166199 |
T |
|
| Q |
110 |
agttcaaacattgaacttatctcacaataatttcattggaacaattccaaagacgattggaggcatgataaatatggaatctctcgatctctctaataat |
209 |
Q |
| |
|
||||||||| || |||||||||||||||||||| || |||||||| ||||| |||||||||||||| |||||||||||||||||| ||||||| |||| |
|
|
| T |
18166200 |
agttcaaacgttaaacttatctcacaataatttgatcggaacaataccaaaagagattggaggcatgaaaaatatggaatctctcgacctctctagtaat |
18166299 |
T |
|
| Q |
210 |
aagttttttggtgaaattcctcaaagcatggctctcttaaactttttggaggtgttgaatttatcttgcaataattttgatggaaaaatcccaacaggaa |
309 |
Q |
| |
|
||||||| ||||||||||||||| ||||| ||||||||| |||||| | ||||||||||||| |||||| ||||| |||| |||||||| ||||| |
|
|
| T |
18166300 |
aagttttatggtgaaattcctcagagcatctctctcttaacctttttaggttatttgaatttatcttacaataactttgacggaataatcccaataggaa |
18166399 |
T |
|
| Q |
310 |
ctcaacttcaaagttttaatgcatcaagttatattgggaatcctaaactatg |
361 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
18166400 |
ctcaacttcaaagttttaatgcatcaagttatattgagaatcctaaactatg |
18166451 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 45 - 364
Target Start/End: Original strand, 19334991 - 19335310
Alignment:
| Q |
45 |
actattgacctttcatccaatagcttgtctggagaattgccattggaattgtttcgacttgttcaagttcaaacattgaacttatctcacaataatttca |
144 |
Q |
| |
|
||||||||||||||| ||||| |||| |||||||| ||||||||||||||||||| |||||||||||||||||||| |||||||||||||||| ||||| |
|
|
| T |
19334991 |
actattgacctttcagccaatcacttgactggagaagtgccattggaattgtttcggcttgttcaagttcaaacattaaacttatctcacaatagtttca |
19335090 |
T |
|
| Q |
145 |
ttggaacaattccaaagacgattggaggcatgataaatatggaatctctcgatctctctaataataagttttttggtgaaattcctcaaagcatggctct |
244 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||| || | |
|
|
| T |
19335091 |
ttggaacaattcagaagacgattggaggcatgataaatatggaatctctcgatctctctaataataagttttatggtgaaattcctcggagcatgtctgt |
19335190 |
T |
|
| Q |
245 |
cttaaactttttggaggtgttgaatttatcttgcaataattttgatggaaaaatcccaacaggaactcaacttcaaagttttaatgcatcaagttatatt |
344 |
Q |
| |
|
||||| |||||||| ||||||||||||| ||| | |||||| |||||||||||||| ||||| ||||||||||||||||||||||| ||||| ||| |
|
|
| T |
19335191 |
cttaacctttttgggttatttgaatttatcttacaacagttttgaaggaaaaatcccaactggaacacaacttcaaagttttaatgcatcgagttacatt |
19335290 |
T |
|
| Q |
345 |
gggaatcctaaactatgcgg |
364 |
Q |
| |
|
|||||||||||||| ||||| |
|
|
| T |
19335291 |
gggaatcctaaactgtgcgg |
19335310 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 36 - 337
Target Start/End: Original strand, 19400699 - 19401000
Alignment:
| Q |
36 |
gataggcgaactattgacctttcatccaatagcttgtctggagaattgccattggaattgtttcgacttgttcaagttcaaacattgaacttatctcaca |
135 |
Q |
| |
|
||||| |||| ||||||||||||| |||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| || ||||||||||||| |
|
|
| T |
19400699 |
gatagacgaattattgacctttcaaccaatagcttgtctggggaactgccattggaattgtttcgacttgttcaagttcaaacgttaaacttatctcaca |
19400798 |
T |
|
| Q |
136 |
ataatttcattggaacaattccaaagacgattggaggcatgataaatatggaatctctcgatctctctaataataagttttttggtgaaattcctcaaag |
235 |
Q |
| |
|
||||||| ||||||||||| ||||| | |||||| ||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
19400799 |
ataatttgattggaacaataccaaaagtggttggagacatgaaacatatggaatctctcgatctctctaataataagttttttggtgaaattcctcagag |
19400898 |
T |
|
| Q |
236 |
catggctctcttaaactttttggaggtgttgaatttatcttgcaataattttgatggaaaaatcccaacaggaactcaacttcaaagttttaatgcatca |
335 |
Q |
| |
|
||||||||||||||||||||| ||||| |||||||||||||||||||||||||| |||| |||||||| |||| ||||| |||||| |||| || ||||| |
|
|
| T |
19400899 |
catggctctcttaaactttttagaggttttgaatttatcttgcaataattttgacggaacaatcccaataggatctcaaattcaaacttttgatccatca |
19400998 |
T |
|
| Q |
336 |
ag |
337 |
Q |
| |
|
|| |
|
|
| T |
19400999 |
ag |
19401000 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 10 - 364
Target Start/End: Original strand, 16678154 - 16678508
Alignment:
| Q |
10 |
aagaatatgtgtatgatgtaaacccggataggcgaactattgacctttcatccaatagcttgtctggagaattgccattggaattgtttcgacttgttca |
109 |
Q |
| |
|
|||| |||||||||||||| |||||||| || ||||||||||||||||| |||||| ||||||||||||| ||||||||||||||||||| |||||||| |
|
|
| T |
16678154 |
aagattatgtgtatgatgttaacccggacagaagaactattgacctttcagccaataacttgtctggagaagtgccattggaattgtttcggcttgttca |
16678253 |
T |
|
| Q |
110 |
agttcaaacattgaacttatctcacaataatttcattggaacaattccaaagacgattggaggcatgataaatatggaatctctcgatctctctaataat |
209 |
Q |
| |
|
||| ||||| || |||||||||||||||||||||| ||||| ||| |||||||||||||| ||||||| |||||||||||||||||| ||||||||||| |
|
|
| T |
16678254 |
agtccaaaccttaaacttatctcacaataatttcagtggaaaaataccaaagacgattggtggcatgaaaaatatggaatctctcgacttctctaataat |
16678353 |
T |
|
| Q |
210 |
aagttttttggtgaaattcctcaaagcatggctctcttaaactttttggaggtgttgaatttatcttgcaataattttgatggaaaaatcccaacaggaa |
309 |
Q |
| |
|
||||||| ||||||||||||||| || | |||||||||||||||||| |||||||| |||||||| |||||||| ||||||||||| | ||||| |
|
|
| T |
16678354 |
aagttttctggtgaaattcctcagagtgcgtctctcttaaactttttgggttatttgaatttgtcttgcaacaattttgacggaaaaatcccgataggaa |
16678453 |
T |
|
| Q |
310 |
ctcaacttcaaagttttaatgcatcaagttatattgggaatcctaaactatgcgg |
364 |
Q |
| |
|
||||||||||||||||||||||||| || || ||||| ||||| ||| ||||||| |
|
|
| T |
16678454 |
ctcaacttcaaagttttaatgcatcgagctacattggcaatccaaaattatgcgg |
16678508 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 33 - 364
Target Start/End: Original strand, 25464017 - 25464348
Alignment:
| Q |
33 |
ccggataggcgaactattgacctttcatccaatagcttgtctggagaattgccattggaattgtttcgacttgttcaagttcaaacattgaacttatctc |
132 |
Q |
| |
|
||||| || |||||||||||||||||| |||||| ||||||||||||| |||||||||||||| |||| || ||||||||||||||||| |||||||||| |
|
|
| T |
25464017 |
ccggaaagacgaactattgacctttcagccaataacttgtctggagaagtgccattggaattggttcggctggttcaagttcaaacattaaacttatctc |
25464116 |
T |
|
| Q |
133 |
acaataatttcattggaacaattcc-aaagacgattggaggcatgataaatatggaatctctcgatctctctaataataagttttttggtgaaattcctc |
231 |
Q |
| |
|
|||||||||||||||||||||| || ||||| |||||||||||||| ||||||||||||||||||||| |||||||| ||| ||| ||||| |||||||| |
|
|
| T |
25464117 |
acaataatttcattggaacaataccgaaaga-gattggaggcatgaaaaatatggaatctctcgatctttctaataacaagctttgtggtggaattcctc |
25464215 |
T |
|
| Q |
232 |
aaagcatggctctcttaaactttttggaggt-gttgaatttatcttgcaataattttgatggaaaaatcccaacaggaactcaacttcaaagttttaatg |
330 |
Q |
| |
|
||||| ||| ||||||||||||||| ||| | ||||||||||||| ||| |||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
25464216 |
aaagcctggttctcttaaacttttt-gagttatttgaatttatcttacaacaattttgatggaaaaatcccaataggaactcaacttcaaagttttaatg |
25464314 |
T |
|
| Q |
331 |
catcaagttatattgggaatcctaaactatgcgg |
364 |
Q |
| |
|
|||| || || ||||| ||||| ||| ||||||| |
|
|
| T |
25464315 |
catcgagctacattggcaatccaaaattatgcgg |
25464348 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 183; E-Value: 7e-99
Query Start/End: Original strand, 39 - 364
Target Start/End: Original strand, 18147803 - 18148128
Alignment:
| Q |
39 |
aggcgaactattgacctttcatccaatagcttgtctggagaattgccattggaattgtttcgacttgttcaagttcaaacattgaacttatctcacaata |
138 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||| |
|
|
| T |
18147803 |
aggcgaactattgacctttcaggcaatagcttgtctggagaattgccattggaattgtttcagcttgttcaagttcaaacattaaacttatctcacaata |
18147902 |
T |
|
| Q |
139 |
atttcattggaacaattccaaagacgattggaggcatgataaatatggaatctctcgatctctctaataataagttttttggtgaaattcctcaaagcat |
238 |
Q |
| |
|
|||| |||||||||| || ||||||||||||||||||| ||||||| |||||||||| ||||||||||| ||||||||||||||||||||||| |||| |
|
|
| T |
18147903 |
attttgttggaacaataccgaagacgattggaggcatgaaaaatatgaaatctctcgacctctctaataacaagttttttggtgaaattcctcagggcat |
18148002 |
T |
|
| Q |
239 |
ggctctcttaaactttttggaggt-gttgaatttatcttgcaataattttgatggaaaaatcccaacaggaactcaacttcaaagttttaatgcatcaag |
337 |
Q |
| |
|
| ||||||||| |||||| ||| | ||||||||||| | ||||||||||| |||| |||||| | ||||| ||||||||||||||||||||||| || |
|
|
| T |
18148003 |
gtctctcttaaccttttt-gagttatttgaatttatcatataataattttgacggaagaatcccgatcggaacacaacttcaaagttttaatgcatcgag |
18148101 |
T |
|
| Q |
338 |
ttatattgggaatcctaaactatgcgg |
364 |
Q |
| |
|
|| ||||| ||||||||||||||||| |
|
|
| T |
18148102 |
ctacattggcaatcctaaactatgcgg |
18148128 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 183; E-Value: 7e-99
Query Start/End: Original strand, 10 - 364
Target Start/End: Complemental strand, 18872934 - 18872580
Alignment:
| Q |
10 |
aagaatatgtgtatgatgtaaacccggataggcgaactattgacctttcatccaatagcttgtctggagaattgccattggaattgtttcgacttgttca |
109 |
Q |
| |
|
|||| ||||||| |||||| || || ||||||||||||||||||||||| ||||| |||| |||||||| ||| |||||||||||||| |||||||| |
|
|
| T |
18872934 |
aagattatgtgtttgatgtcaatccatataggcgaactattgacctttcagccaatcacttgactggagaagtgctattggaattgtttcagcttgttca |
18872835 |
T |
|
| Q |
110 |
agttcaaacattgaacttatctcacaataatttcattggaacaattccaaagacgattggaggcatgataaatatggaatctctcgatctctctaataat |
209 |
Q |
| |
|
|||||||||||| ||||||||||| |||| |||| ||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| |||| |
|
|
| T |
18872834 |
agttcaaacattaaacttatctcataatagtttcgttggaacaattccaaagacgattagaggcatgaacaatatggaatctctcgatctctctagtaat |
18872735 |
T |
|
| Q |
210 |
aagttttttggtgaaattcctcaaagcatggctctcttaaactttttggaggtgttgaatttatcttgcaataattttgatggaaaaatcccaacaggaa |
309 |
Q |
| |
|
||||||| ||||||||||||||| |||||| |||| ||| ||||| ||| ||||||||||||| ||| | |||||| |||||||| |||| |||| |
|
|
| T |
18872734 |
aagttttgtggtgaaattcctcagagcatgtctctgttacactttatgggttatttgaatttatcttacaacagttttgaaggaaaaattccaattggaa |
18872635 |
T |
|
| Q |
310 |
ctcaacttcaaagttttaatgcatcaagttatattgggaatcctaaactatgcgg |
364 |
Q |
| |
|
||||||||||||||||||||||||| |||| ||||||||||||||||||||||| |
|
|
| T |
18872634 |
ctcaacttcaaagttttaatgcatcgagttgcattgggaatcctaaactatgcgg |
18872580 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 183; E-Value: 7e-99
Query Start/End: Original strand, 42 - 364
Target Start/End: Original strand, 19425666 - 19425988
Alignment:
| Q |
42 |
cgaactattgacctttcatccaatagcttgtctggagaattgccattggaattgtttcgacttgttcaagttcaaacattgaacttatctcacaataatt |
141 |
Q |
| |
|
||||| |||||||||||| | |||||||||||||||||| |||| |||||||||||| | |||||||| ||||||| || ||||||||||||||||||| |
|
|
| T |
19425666 |
cgaaccattgacctttcagcaaatagcttgtctggagaagtgcctttggaattgtttaggcttgttcagcttcaaacgttaaacttatctcacaataatt |
19425765 |
T |
|
| Q |
142 |
tcattggaacaattccaaagacgattggaggcatgataaatatggaatctctcgatctctctaataataagttttttggtgaaattcctcaaagcatggc |
241 |
Q |
| |
|
| ||||||||||| ||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| | |
|
|
| T |
19425766 |
tgattggaacaataccaaaagtgattggaggcatgaaaaatatggaatctctcgatctctctaataataagttttgtggtgaaattcctcagagcatgtc |
19425865 |
T |
|
| Q |
242 |
tctcttaaactttttggaggtgttgaatttatcttgcaataattttgatggaaaaatcccaacaggaactcaacttcaaagttttaatgcatcaagttat |
341 |
Q |
| |
|
| |||||| |||||||| | ||||||||||||||||||||||| | |||||||||||||| ||||| ||||||||||| |||||||||| ||||| |
|
|
| T |
19425866 |
tgtcttaacctttttgggttttttgaatttatcttgcaataatttaaacggaaaaatcccaactggaacacaacttcaaagaattaatgcatcgagttac |
19425965 |
T |
|
| Q |
342 |
attgggaatcctaaactatgcgg |
364 |
Q |
| |
|
||||||||||||||||||||||| |
|
|
| T |
19425966 |
attgggaatcctaaactatgcgg |
19425988 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 10 - 364
Target Start/End: Original strand, 19415128 - 19415482
Alignment:
| Q |
10 |
aagaatatgtgtatgatgtaaacccggataggcgaactattgacctttcatccaatagcttgtctggagaattgccattggaattgtttcgacttgttca |
109 |
Q |
| |
|
|||| ||||||||| |||| | |||||||||||||||||||||||||||||||||||||||||||||||| || ||||| |||| |||||||||||||| |
|
|
| T |
19415128 |
aagattatgtgtatcatgttagtccggataggcgaactattgacctttcatccaatagcttgtctggagaagtgacattgcaattatttcgacttgttca |
19415227 |
T |
|
| Q |
110 |
agttcaaacattgaacttatctcacaataatttcattggaacaattccaaagacgattggaggcatgataaatatggaatctctcgatctctctaataat |
209 |
Q |
| |
|
| | |||||||| |||||||||||||||||||| | |||||||||||| ||| |||||| | ||||| ||||||||||||||| || ||||| |||||| |
|
|
| T |
19415228 |
aatacaaacattaaacttatctcacaataatttgactggaacaattcctaagctgattggtgacatgaaaaatatggaatctctagacctctcaaataat |
19415327 |
T |
|
| Q |
210 |
aagttttttggtgaaattcctcaaagcatggctctcttaaactttttggaggtgttgaatttatcttgcaataattttgatggaaaaatcccaacaggaa |
309 |
Q |
| |
|
||||| | |||||||||||||| |||||| || |||||| ||||||||| || |||||||||| ||| | |||||| ||||||||||||| ||||| |
|
|
| T |
19415328 |
aagttctacggtgaaattcctcagagcatgtctttcttaacctttttggattatttaaatttatcttacaacagttttgacggaaaaatcccaataggaa |
19415427 |
T |
|
| Q |
310 |
ctcaacttcaaagttttaatgcatcaagttatattgggaatcctaaactatgcgg |
364 |
Q |
| |
|
||||||||||||||||||| ||||||||||| | |||||||||||||||||||| |
|
|
| T |
19415428 |
ctcaacttcaaagttttaacgcatcaagttacaacgggaatcctaaactatgcgg |
19415482 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 36 - 364
Target Start/End: Original strand, 18116938 - 18117266
Alignment:
| Q |
36 |
gataggcgaactattgacctttcatccaatagcttgtctggagaattgccattggaattgtttcgacttgttcaagttcaaacattgaacttatctcaca |
135 |
Q |
| |
|
|||||||||||||||||| ||||| | |||| |||||||||| || ||||||||||||| ||||| |||||| ||||||||||||| ||||||||||||| |
|
|
| T |
18116938 |
gataggcgaactattgacttttcagctaataacttgtctggaaaagtgccattggaattatttcggcttgttaaagttcaaacattaaacttatctcaca |
18117037 |
T |
|
| Q |
136 |
ataatttcattggaacaattccaaagacgattggaggcatgataaatatggaatctctcgatctctctaataataagttttttggtgaaattcctcaaag |
235 |
Q |
| |
|
|||||||||||||||| || || ||||||||||||||||||| ||||||||||||||||||| | |||||||||||| ||| ||||||||||||||| || |
|
|
| T |
18117038 |
ataatttcattggaactataccgaagacgattggaggcatgaaaaatatggaatctctcgatttttctaataataagctttgtggtgaaattcctcagag |
18117137 |
T |
|
| Q |
236 |
catggctctcttaaactttttggaggtgttgaatttatcttgcaataattttgatggaaaaatcccaacaggaactcaacttcaaagttttaatgcatca |
335 |
Q |
| |
|
|||| ||||||||| ||||||| ||||||||||| | |||||||||||| ||||||||||||| || ||| |||||||||||||||||||||||| |
|
|
| T |
18117138 |
catgtctctcttaacttttttgggttatttgaatttatcatacaataattttgacggaaaaatcccaatagcaacgcaacttcaaagttttaatgcatca |
18117237 |
T |
|
| Q |
336 |
agttatattgggaatcctaaactatgcgg |
364 |
Q |
| |
|
|| || ||||| ||||| ||| ||||||| |
|
|
| T |
18117238 |
agctacattggcaatccaaaattatgcgg |
18117266 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 175; E-Value: 4e-94
Query Start/End: Original strand, 36 - 366
Target Start/End: Original strand, 19462162 - 19462492
Alignment:
| Q |
36 |
gataggcgaactattgacctttcatccaatagcttgtctggagaattgccattggaattgtttcgacttgttcaagttcaaacattgaacttatctcaca |
135 |
Q |
| |
|
|||||||||||||||||| ||||| | |||| |||||||||| || ||||||||||||| ||||| |||||| ||||||||||||| ||||||||||||| |
|
|
| T |
19462162 |
gataggcgaactattgacttttcagctaataacttgtctggaaaagtgccattggaattatttcggcttgttaaagttcaaacattaaacttatctcaca |
19462261 |
T |
|
| Q |
136 |
ataatttcattggaacaattccaaagacgattggaggcatgataaatatggaatctctcgatctctctaataataagttttttggtgaaattcctcaaag |
235 |
Q |
| |
|
|||||||||||||||| || || ||||||||||||||||||| ||||||||||||||||||| | |||||||||||| ||| |||||||||||||| || |
|
|
| T |
19462262 |
ataatttcattggaactataccgaagacgattggaggcatgaaaaatatggaatctctcgatttttctaataataagctttgtggtgaaattcctcggag |
19462361 |
T |
|
| Q |
236 |
catggctctcttaaactttttggaggtgttgaatttatcttgcaataattttgatggaaaaatcccaacaggaactcaacttcaaagttttaatgcatca |
335 |
Q |
| |
|
|||| ||||||||| ||||||| ||||||||||| | |||||||||||| ||||||||||||| || ||| |||||||||||||||||||||||| |
|
|
| T |
19462362 |
catgtctctcttaacttttttgggttatttgaatttatcatacaataattttgacggaaaaatcccaatagcaacgcaacttcaaagttttaatgcatca |
19462461 |
T |
|
| Q |
336 |
agttatattgggaatcctaaactatgcggtg |
366 |
Q |
| |
|
|| || ||||| ||||| ||| ||||||||| |
|
|
| T |
19462462 |
agctacattggcaatccaaaattatgcggtg |
19462492 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 33 - 364
Target Start/End: Complemental strand, 14895423 - 14895092
Alignment:
| Q |
33 |
ccggataggcgaactattgacctttcatccaatagcttgtctggagaattgccattggaattgtttcgacttgttcaagttcaaacattgaacttatctc |
132 |
Q |
| |
|
||||| || |||||||||||||||||| ||||||||||||| |||||| ||||||||||||||||||| ||||||||||||||||| || |||||||||| |
|
|
| T |
14895423 |
ccggagagacgaactattgacctttcagccaatagcttgtccggagaagtgccattggaattgtttcggcttgttcaagttcaaacgttaaacttatctc |
14895324 |
T |
|
| Q |
133 |
acaataatttcattggaacaattccaaagacgattggaggcatgataaatatggaatctctcgatctctctaataataagttttttggtgaaattcctca |
232 |
Q |
| |
|
|||||||||| ||||||||||| ||||| |||||| |||||| |||||||||||||| || ||||||| ||||||||||| |||||||||||| || |
|
|
| T |
14895323 |
acaataatttgattggaacaataccaaaagatattggacgcatgaagaatatggaatctcttgacctctctagtaataagttttatggtgaaattccgca |
14895224 |
T |
|
| Q |
233 |
aagcatggctctcttaaactttttggaggtgttgaatttatcttgcaataattttgatggaaaaatcccaacaggaactcaacttcaaagttttaatgca |
332 |
Q |
| |
|
|||||| ||||||||| ||||||| ||||||||||||| ||| |||||||| |||||||| ||||||||||||||||||||||||||||||| | |
|
|
| T |
14895223 |
gagcatgtctctcttaacatttttgggttatttgaatttatcttacaacaattttgacggaaaaattccaacaggaactcaacttcaaagttttaatgaa |
14895124 |
T |
|
| Q |
333 |
tcaagttatattgggaatcctaaactatgcgg |
364 |
Q |
| |
|
|| || || ||||| ||||||||||||||||| |
|
|
| T |
14895123 |
tcgagctacattggaaatcctaaactatgcgg |
14895092 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 39 - 361
Target Start/End: Original strand, 19437931 - 19438253
Alignment:
| Q |
39 |
aggcgaactattgacctttcatccaatagcttgtctggagaattgccattggaattgtttcgacttgttcaagttcaaacattgaacttatctcacaata |
138 |
Q |
| |
|
||||||||||||||||||||| | |||| ||||||||||||| ||||||||||||| |||| ||||||||||||||||| || |||||||||||||||| |
|
|
| T |
19437931 |
aggcgaactattgacctttcagcgaataacttgtctggagaagtgccattggaattttttcagcttgttcaagttcaaacgttaaacttatctcacaata |
19438030 |
T |
|
| Q |
139 |
atttcattggaacaattccaaagacgattggaggcatgataaatatggaatctctcgatctctctaataataagttttttggtgaaattcctcaaagcat |
238 |
Q |
| |
|
|||| |||||||||| || ||||||||| ||||||||| ||||||||||||||||||||| |||||||| |||||||||||||||||||||||| |||| |
|
|
| T |
19438031 |
attttgttggaacaataccgaagacgattagaggcatgaaaaatatggaatctctcgatctatctaataacaagttttttggtgaaattcctcaaggcat |
19438130 |
T |
|
| Q |
239 |
ggctctcttaaactttttggaggtgttgaatttatcttgcaataattttgatggaaaaatcccaacaggaactcaacttcaaagttttaatgcatcaagt |
338 |
Q |
| |
|
| ||||||||| ||||||||| ||||||||||| | ||||||||||| |||| |||||| | ||||| ||||||||||||||||||||||| || |
|
|
| T |
19438131 |
gtctctcttaacctttttggattatttgaatttatcatataataattttgacggaagaatcccgatcggaacgcaacttcaaagttttaatgcatcgagc |
19438230 |
T |
|
| Q |
339 |
tatattgggaatcctaaactatg |
361 |
Q |
| |
|
|| ||||| ||||||||| |||| |
|
|
| T |
19438231 |
tacattggcaatcctaaattatg |
19438253 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 10 - 361
Target Start/End: Original strand, 17950779 - 17951130
Alignment:
| Q |
10 |
aagaatatgtgtatgatgtaaacccggataggcgaactattgacctttcatccaatagcttgtctggagaattgccattggaattgtttcgacttgttca |
109 |
Q |
| |
|
|||| |||||||||||||| |||| | ||||||||||||||||||||||| ||||||||||||||||| || ||||||||||||||||||| |||||||| |
|
|
| T |
17950779 |
aagattatgtgtatgatgttaacctgtataggcgaactattgacctttcagccaatagcttgtctggaaaagtgccattggaattgtttcggcttgttca |
17950878 |
T |
|
| Q |
110 |
agttcaaacattgaacttatctcacaataatttcattggaacaattccaaagacgattggaggcatgataaatatggaatctctcgatctctctaataat |
209 |
Q |
| |
|
|||||||||||| |||||||||||||| ||||| | |||||||| || || |||||||||||||||| |||||||||||||||||| ||||||||||| |
|
|
| T |
17950879 |
agttcaaacattaaacttatctcacaacaattttgtgggaacaataccgaaaacgattggaggcatgaaaaatatggaatctctcgacctctctaataac |
17950978 |
T |
|
| Q |
210 |
aagttttttggtgaaattcctcaaagcatggctctcttaaactttttggaggt-gttgaatttatcttgcaataattttgatggaaaaatcccaacagga |
308 |
Q |
| |
|
||||||||||||||||||||||| | ||| ||||||| | |||||| ||| | ||||||||||| | ||||||||||||||||||||||| || |
|
|
| T |
17950979 |
aagttttttggtgaaattcctcatggtatgtctctcttgaccttttt-gagttatttgaatttatcatataataattttgatggaaaaatcccggtcggt |
17951077 |
T |
|
| Q |
309 |
actcaacttcaaagttttaatgcatcaagttatattgggaatcctaaactatg |
361 |
Q |
| |
|
|| ||||||||||||||||||||||| || || ||||| |||| |||| |||| |
|
|
| T |
17951078 |
acacaacttcaaagttttaatgcatcgagctacattggcaatcttaaattatg |
17951130 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 168; E-Value: 6e-90
Query Start/End: Original strand, 10 - 364
Target Start/End: Original strand, 19354659 - 19355013
Alignment:
| Q |
10 |
aagaatatgtgtatgatgtaaacccggataggcgaactattgacctttcatccaatagcttgtctggagaattgccattggaattgtttcgacttgttca |
109 |
Q |
| |
|
|||| ||||||| |||||| |||||||||||||||||||||||||||||| |||| |||| |||||| | |||||||||||||||| |||||||| |
|
|
| T |
19354659 |
aagattatgtgtctgatgttaacccggataggcgaactattgacctttcagtcaatcacttgataggagaagttacattggaattgtttcggcttgttca |
19354758 |
T |
|
| Q |
110 |
agttcaaacattgaacttatctcacaataatttcattggaacaattccaa-agacgattggaggcatgataaatatggaatctctcgatctctctaataa |
208 |
Q |
| |
|
||||||||| || ||||||||||| ||||| || | ||||||||| |||| ||| |||||||||||||| ||||||||||||||| || ||||||| ||| |
|
|
| T |
19354759 |
agttcaaaccttaaacttatctcataataacttgaatggaacaataccaagaga-gattggaggcatgaaaaatatggaatctcttgacctctctagtaa |
19354857 |
T |
|
| Q |
209 |
taagttttttggtgaaattcctcaaagcatggctctcttaaactttttggaggtgttgaatttatcttgcaataattttgatggaaaaatcccaacagga |
308 |
Q |
| |
|
|||||||| |||||| |||||||| |||||| ||||||||| |||||| | ||||||||||||| ||| |||||||| ||||||||||||| |||| |
|
|
| T |
19354858 |
taagttttatggtgacattcctcagagcatgtctctcttaacctttttaggttatttgaatttatcttacaacaattttgacggaaaaatcccaatagga |
19354957 |
T |
|
| Q |
309 |
actcaacttcaaagttttaatgcatcaagttatattgggaatcctaaactatgcgg |
364 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||| ||||||||||||||||| |
|
|
| T |
19354958 |
actcaacttcaaagttttaatgcatcaagttacgttggaaatcctaaactatgcgg |
19355013 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 42 - 364
Target Start/End: Complemental strand, 17726561 - 17726239
Alignment:
| Q |
42 |
cgaactattgacctttcatccaatagcttgtctggagaattgccattggaattgtttcgacttgttcaagttcaaacattgaacttatctcacaataatt |
141 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||| ||| | ||| |||||| ||||| |||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
17726561 |
cgaactattgacctttcagccaatagcttgtctggtgaagtaacatcggaattatttcggcttgttcaagttcaaacattaaacttatctcacaataatt |
17726462 |
T |
|
| Q |
142 |
tcattggaacaattccaaagacgattggaggcatgataaatatggaatctctcgatctctctaataataagttttttggtgaaattcctcaaagcatggc |
241 |
Q |
| |
|
||||||||||||| || || || ||||||||||||| |||| ||||||||||||| ||||| || ||||| |||| ||||||||||||||| |||||| | |
|
|
| T |
17726461 |
tcattggaacaataccgaaaacaattggaggcatgaaaaatttggaatctctcgacctctccaacaataatttttctggtgaaattcctcagagcatgtc |
17726362 |
T |
|
| Q |
242 |
tctcttaaactttttggaggtgttgaatttatcttgcaataattttgatggaaaaatcccaacaggaactcaacttcaaagttttaatgcatcaagttat |
341 |
Q |
| |
|
| ||| ||||||||| ||||||||||||| ||| || ||||||||||||||||||| |||||||||||||||||||||||||||||| |||||| |
|
|
| T |
17726361 |
ttcgttacactttttgggttatttgaatttatcttacaacaagtttgatggaaaaatcccaataggaactcaacttcaaagttttaatgcatcgagttat |
17726262 |
T |
|
| Q |
342 |
attgggaatcctaaactatgcgg |
364 |
Q |
| |
|
|||||||||| | | |||||||| |
|
|
| T |
17726261 |
attgggaatcattatctatgcgg |
17726239 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 42 - 364
Target Start/End: Complemental strand, 19027790 - 19027468
Alignment:
| Q |
42 |
cgaactattgacctttcatccaatagcttgtctggagaattgccattggaattgtttcgacttgttcaagttcaaacattgaacttatctcacaataatt |
141 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||| ||| | ||| |||||| ||||| |||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
19027790 |
cgaactattgacctttcagccaatagcttgtctggtgaagtaacatcggaattatttcggcttgttcaagttcaaacattaaacttatctcacaataatt |
19027691 |
T |
|
| Q |
142 |
tcattggaacaattccaaagacgattggaggcatgataaatatggaatctctcgatctctctaataataagttttttggtgaaattcctcaaagcatggc |
241 |
Q |
| |
|
||||||||||||| || || || ||||||||||||| |||| ||||||||||||| ||||| || ||||| |||| ||||||||||||||| |||||| | |
|
|
| T |
19027690 |
tcattggaacaataccgaaaacaattggaggcatgaaaaatttggaatctctcgacctctccaacaataatttttctggtgaaattcctcagagcatgtc |
19027591 |
T |
|
| Q |
242 |
tctcttaaactttttggaggtgttgaatttatcttgcaataattttgatggaaaaatcccaacaggaactcaacttcaaagttttaatgcatcaagttat |
341 |
Q |
| |
|
| ||| ||||||||| ||||||||||||| ||| || ||||||||||||||||||| |||||||||||||||||||||||||||||| |||||| |
|
|
| T |
19027590 |
ttcgttacactttttgggttatttgaatttatcttacaacaagtttgatggaaaaatcccaataggaactcaacttcaaagttttaatgcatcgagttat |
19027491 |
T |
|
| Q |
342 |
attgggaatcctaaactatgcgg |
364 |
Q |
| |
|
|||||||||| | | |||||||| |
|
|
| T |
19027490 |
attgggaatcattatctatgcgg |
19027468 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 151; E-Value: 8e-80
Query Start/End: Original strand, 43 - 361
Target Start/End: Original strand, 18109419 - 18109737
Alignment:
| Q |
43 |
gaactattgacctttcatccaatagcttgtctggagaattgccattggaattgtttcgacttgttcaagttcaaacattgaacttatctcacaataattt |
142 |
Q |
| |
|
||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||| |||||||||||||||||||| |||||||||||||| ||||| |
|
|
| T |
18109419 |
gaactattgacctttcagccaatagcttgcctggagaagtgccattggaattgtttctgcttgttcaagttcaaacattaaacttatctcacaacaattt |
18109518 |
T |
|
| Q |
143 |
cattggaacaattccaaagacgattggaggcatgataaatatggaatctctcgatctctctaataataagttttttggtgaaattcctcaaagcatggct |
242 |
Q |
| |
|
| |||||||| || || |||||||||||||||| |||||||||||||||||| ||||||||||| |||||||||||||||||||| || | ||| || |
|
|
| T |
18109519 |
tgtgggaacaataccgaaaacgattggaggcatgaaaaatatggaatctctcgacctctctaataacaagttttttggtgaaattccccagggtatgtct |
18109618 |
T |
|
| Q |
243 |
ctcttaaactttttggaggtgttgaatttatcttgcaataattttgatggaaaaatcccaacaggaactcaacttcaaagttttaatgcatcaagttata |
342 |
Q |
| |
|
||||| | |||||||| ||||||||||| | |||||||||||||||||||||||| || || ||||||||||||||||||||||| || || | |
|
|
| T |
18109619 |
ctcttgacctttttgggttatttgaatttatcatataataattttgatggaaaaatcccagtcggtacacaacttcaaagttttaatgcatcgagctaca |
18109718 |
T |
|
| Q |
343 |
ttgggaatcctaaactatg |
361 |
Q |
| |
|
|||| ||||| ||| |||| |
|
|
| T |
18109719 |
ttggcaatccaaaattatg |
18109737 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 39 - 364
Target Start/End: Original strand, 19456270 - 19456595
Alignment:
| Q |
39 |
aggcgaactattgacctttcatccaatagcttgtctggagaattgccattggaattgtttcgacttgttcaagttcaaacattgaacttatctcacaata |
138 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| ||||||| ||||||||||| |||||||||||||||| |
|
|
| T |
19456270 |
aggcgaactattgacgattcatccaatagcttgtctggagaagtgccattggaattgtttcggtttgttcaggttcaaacattaaacttatctcacaata |
19456369 |
T |
|
| Q |
139 |
atttcattggaacaattccaaagacgattggaggcatgataaatatggaatctctcgatctctctaataataagttttttggtgaaattcctcaaagcat |
238 |
Q |
| |
|
||||| |||| || || || ||||| |||||||| |||| |||||||||||||||||| | || || |||||||||| |||||||||||| || ||||| |
|
|
| T |
19456370 |
atttctttggtaccataccgaagacaattggaggtatgaaaaatatggaatctctcgaattttccaaaaataagttttgtggtgaaattccacagagcat |
19456469 |
T |
|
| Q |
239 |
ggctctcttaaactttttggaggtgttgaatttatcttgcaataattttgatggaaaaatcccaacaggaactcaacttcaaagttttaatgcatcaagt |
338 |
Q |
| |
|
| ||||||||| |||||||| ||||||||||| | |||||||||||| |||||||||| | || ||| ||||||||||||||||| ||||| || |
|
|
| T |
19456470 |
gtctctcttaacctttttgggttatttgaatttatcatacaataattttgacagaaaaatcccgatagcaacgcaacttcaaagttttaacgcatcgagc |
19456569 |
T |
|
| Q |
339 |
tatattgggaatcctaaactatgcgg |
364 |
Q |
| |
|
|| ||||| ||||| ||| ||||||| |
|
|
| T |
19456570 |
tacattggaaatccaaaattatgcgg |
19456595 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 39 - 249
Target Start/End: Original strand, 18104319 - 18104529
Alignment:
| Q |
39 |
aggcgaactattgacctttcatccaatagcttgtctggagaattgccattggaattgtttcgacttgttcaagttcaaacattgaacttatctcacaata |
138 |
Q |
| |
|
||||||||| ||||||||||| | |||||||||||||| ||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
18104319 |
aggcgaacttttgacctttcagctaatagcttgtctggtgaagtgccattggaattgtttcggcttgttcaacttcaaacattgaacttatctcacaata |
18104418 |
T |
|
| Q |
139 |
atttcattggaacaattccaaagacgattggaggcatgataaatatggaatctctcgatctctctaataataagttttttggtgaaattcctcaaagcat |
238 |
Q |
| |
|
|||| ||||||||||| || |||||||||||| |||||| |||||||||||||||||| ||||||||||| ||||||||||||||||||||||| ||| |
|
|
| T |
18104419 |
attttattggaacaataccgaagacgattggaagcatgaaaaatatggaatctctcgacctctctaataacaagttttttggtgaaattcctcaggacat |
18104518 |
T |
|
| Q |
239 |
ggctctcttaa |
249 |
Q |
| |
|
| ||||||||| |
|
|
| T |
18104519 |
gactctcttaa |
18104529 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #28
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 264 - 364
Target Start/End: Original strand, 18104706 - 18104806
Alignment:
| Q |
264 |
ttgaatttatcttgcaataattttgatggaaaaatcccaacaggaactcaacttcaaagttttaatgcatcaagttatattgggaatcctaaactatgcg |
363 |
Q |
| |
|
||||||||||| | ||||||||||| |||| |||||| || ||||| |||||||||||||||||||||||||| || ||||| |||||||||||||||| |
|
|
| T |
18104706 |
ttgaatttatcatataataattttgacggaagaatcccgaccggaacacaacttcaaagttttaatgcatcaagctacattggcaatcctaaactatgcg |
18104805 |
T |
|
| Q |
364 |
g |
364 |
Q |
| |
|
| |
|
|
| T |
18104806 |
g |
18104806 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 106 - 241
Target Start/End: Original strand, 16003181 - 16003316
Alignment:
| Q |
106 |
ttcaagttcaaacattgaacttatctcacaataatttcattggaacaattccaaagacgattggaggcatgataaatatggaatctctcgatctctctaa |
205 |
Q |
| |
|
||||| ||||| |||| || |||||||| |||||||| | | ||||||| | | ||| |||| || ||||| |||| | |||||| | || ||||| || |
|
|
| T |
16003181 |
ttcaaattcaagcattcaatttatctcataataatttaagtagaacaatactagagatgattaaagacatgaaaaatctagaatcttttgacctctccaa |
16003280 |
T |
|
| Q |
206 |
taataagttttttggtgaaattcctcaaagcatggc |
241 |
Q |
| |
|
||||| ||||| |||||||||| ||||||||||||| |
|
|
| T |
16003281 |
taatatgttttctggtgaaatttctcaaagcatggc |
16003316 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 106 - 154
Target Start/End: Original strand, 19428078 - 19428126
Alignment:
| Q |
106 |
ttcaagttcaaacattgaacttatctcacaataatttcattggaacaat |
154 |
Q |
| |
|
||||||||||||| |||||| ||||||| |||||||| | ||||||||| |
|
|
| T |
19428078 |
ttcaagttcaaactttgaacatatctcataataatttgagtggaacaat |
19428126 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 19 - 364
Target Start/End: Original strand, 8460519 - 8460864
Alignment:
| Q |
19 |
tgtatgatgtaaacccggataggcgaactattgacctttcatccaatagcttgtctggagaattgccattggaattgtttcgacttgttcaagttcaaac |
118 |
Q |
| |
|
|||||||||| | ||| ||||||||||||||||||||||| | |||| ||||||||||||| |||| |||||||| |||| ||||| ||||||||||| |
|
|
| T |
8460519 |
tgtatgatgttagccctaataggcgaactattgacctttcagctaataacttgtctggagaagtgccgttggaattatttcatcttgtccaagttcaaac |
8460618 |
T |
|
| Q |
119 |
attgaacttatctcacaataatttcattggaacaattccaaagacgattggaggcatgataaatatggaatctctcgatctctctaataataagtttttt |
218 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||| || |||| |||||||||||||| | |||||||||| ||||| ||||||||||||||||||| | |
|
|
| T |
8460619 |
attgaacttatctcacaataatttgattggaacaatacccaagatgattggaggcatgaaatatatggaatcactcgacctctctaataataagttttgt |
8460718 |
T |
|
| Q |
219 |
ggtgaaattcctcaaagcatggctctcttaaactttttggaggtgttgaatttatcttgcaataattttgatggaaaaatcccaacaggaactcaacttc |
318 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| ||||||||||||| ||||||||||||| |
|
|
| T |
8460719 |
ggtgaaattcctcagagcatggctctcttaaactttttagaggttttgaatttatcttgcaataattttgacggaaaaatcccaattggaactcaacttc |
8460818 |
T |
|
| Q |
319 |
aaagttttaatgcatcaagttatattgggaatcctaaactatgcgg |
364 |
Q |
| |
|
|||||||||||||||| || || ||||| ||||||||||| ||||| |
|
|
| T |
8460819 |
aaagttttaatgcatcgagctacattggaaatcctaaactgtgcgg |
8460864 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 201; Significance: 1e-109; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 10 - 358
Target Start/End: Original strand, 15536477 - 15536825
Alignment:
| Q |
10 |
aagaatatgtgtatgatgtaaacccggataggcgaactattgacctttcatccaatagcttgtctggagaattgccattggaattgtttcgacttgttca |
109 |
Q |
| |
|
|||| |||||||||||| | ||| |||| || |||||||||||||||||| |||||||||||| ||| ||| ||||||||||||||||||| |||||||| |
|
|
| T |
15536477 |
aagattatgtgtatgatatcaactcggaaagacgaactattgacctttcagccaatagcttgtttggggaactgccattggaattgtttcggcttgttca |
15536576 |
T |
|
| Q |
110 |
agttcaaacattgaacttatctcacaataatttcattggaacaattccaaagacgattggaggcatgataaatatggaatctctcgatctctctaataat |
209 |
Q |
| |
|
||||||||| || |||||||||||||||||||| |||||||||| |||||||||||||| ||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
15536577 |
agttcaaacgttaaacttatctcacaataattttgttggaacaataccaaagacgattggcggcatgataaacatggaatctctcgatctctctaataat |
15536676 |
T |
|
| Q |
210 |
aagttttttggtgaaattcctcaaagcatggctctcttaaactttttggaggtgttgaatttatcttgcaataattttgatggaaaaatcccaacaggaa |
309 |
Q |
| |
|
||||||| ||||||||||||||||| |||| | |||||| |||||||| ||||||||||||||||||||||| ||||||||||||||| |||| |
|
|
| T |
15536677 |
aagttttatggtgaaattcctcaaaacatgtttgtcttaacctttttgggttatttgaatttatcttgcaataatttcaatggaaaaatcccaattggaa |
15536776 |
T |
|
| Q |
310 |
ctcaacttcaaagttttaatgcatcaagttatattgggaatcctaaact |
358 |
Q |
| |
|
| ||||||||||||||||||||||| ||||| |||| |||||||||||| |
|
|
| T |
15536777 |
cacaacttcaaagttttaatgcatcgagttacattgagaatcctaaact |
15536825 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 39 - 349
Target Start/End: Complemental strand, 2709600 - 2709290
Alignment:
| Q |
39 |
aggcgaactattgacctttcatccaatagcttgtctggagaattgccattggaattgtttcgacttgttcaagttcaaacattgaacttatctcacaata |
138 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||| ||||||||||||| |||| |||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
2709600 |
aggcgaactattgacctttcagccaatagcttgtctggagaagtgccattggaattatttcaacttgttcaagttcaatcattgaacttatctcacaata |
2709501 |
T |
|
| Q |
139 |
atttcattggaacaattccaaagacgattggaggcatgataaatatggaatctctcgatctctctaataataagttttttggtgaaattcctcaaagcat |
238 |
Q |
| |
|
|||| | ||||||||| || |||| |||||||| ||||| ||| ||||||||||||||||||||||| ||||| |||||||||||||||||||| ||||| |
|
|
| T |
2709500 |
atttgactggaacaatacccaagatgattggagacatgaaaaacatggaatctctcgatctctctaacaataaattttttggtgaaattcctcagagcat |
2709401 |
T |
|
| Q |
239 |
ggctctcttaaactttttggaggtgttgaatttatcttgcaataattttgatggaaaaatcccaacaggaactcaacttcaaagttttaatgcatcaagt |
338 |
Q |
| |
|
|||| || ||| || ||| ||||| || ||||||||||||||||||||| ||||||||||||||| ||| ||||||||||| ||||||||||| || || |
|
|
| T |
2709400 |
ggctatcataacctatttagaggttttaaatttatcttgcaataattttaatggaaaaatcccaatagggactcaacttcagagttttaatgcttcgagc |
2709301 |
T |
|
| Q |
339 |
tatattgggaa |
349 |
Q |
| |
|
|| |||||||| |
|
|
| T |
2709300 |
tacattgggaa |
2709290 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0640 (Bit Score: 154; Significance: 1e-81; HSPs: 1)
Name: scaffold0640
Description:
Target: scaffold0640; HSP #1
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 36 - 345
Target Start/End: Original strand, 6376 - 6685
Alignment:
| Q |
36 |
gataggcgaactattgacctttcatccaatagcttgtctggagaattgccattggaattgtttcgacttgttcaagttcaaacattgaacttatctcaca |
135 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||| || || || ||||||| ||||| |||||||||||||||||||| || |||||||||| |
|
|
| T |
6376 |
gataggcgaactattgacctttcagtcaatagcttgtctggaaaagtgtcaatggaattatttcgtcttgttcaagttcaaacattaaatttatctcaca |
6475 |
T |
|
| Q |
136 |
ataatttcattggaacaattccaaagacgattggaggcatgataaatatggaatctctcgatctctctaataataagttttttggtgaaattcctcaaag |
235 |
Q |
| |
|
|| |||| | ||||||||| ||||||| |||||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||||||||||| || |
|
|
| T |
6476 |
atcattttactggaacaataccaaagatgattggaggcatgaaaaatatggagtctctcgatctctctaataataagttttgtggtgaaattcctcagag |
6575 |
T |
|
| Q |
236 |
catggctctcttaaactttttggaggtgttgaatttatcttgcaataattttgatggaaaaatcccaacaggaactcaacttcaaagttttaatgcatca |
335 |
Q |
| |
|
|||| ||| ||||||||| |||| ||||| ||||||||||| |||||| | |||| || |||| || |||||||||||||||||||||||||| |
|
|
| T |
6576 |
catgtctcacttaaacttcttgggttatttgaacttatcttgcaacaattttaacggaactataccaatggggactcaacttcaaagttttaatgcatcg |
6675 |
T |
|
| Q |
336 |
agttatattg |
345 |
Q |
| |
|
|| ||||||| |
|
|
| T |
6676 |
agctatattg |
6685 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0271 (Bit Score: 154; Significance: 1e-81; HSPs: 1)
Name: scaffold0271
Description:
Target: scaffold0271; HSP #1
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 36 - 345
Target Start/End: Original strand, 11471 - 11780
Alignment:
| Q |
36 |
gataggcgaactattgacctttcatccaatagcttgtctggagaattgccattggaattgtttcgacttgttcaagttcaaacattgaacttatctcaca |
135 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||| || || || ||||||| ||||| |||||||||||||||||||| || |||||||||| |
|
|
| T |
11471 |
gataggcgaactattgacctttcagtcaatagcttgtctggaaaagtgtcaatggaattatttcgtcttgttcaagttcaaacattaaatttatctcaca |
11570 |
T |
|
| Q |
136 |
ataatttcattggaacaattccaaagacgattggaggcatgataaatatggaatctctcgatctctctaataataagttttttggtgaaattcctcaaag |
235 |
Q |
| |
|
|| |||| | ||||||||| ||||||| |||||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||||||||||| || |
|
|
| T |
11571 |
atcattttactggaacaataccaaagaagattggaggcatgaaaaatatggagtctctcgatctctctaataataagttttgtggtgaaattcctcagag |
11670 |
T |
|
| Q |
236 |
catggctctcttaaactttttggaggtgttgaatttatcttgcaataattttgatggaaaaatcccaacaggaactcaacttcaaagttttaatgcatca |
335 |
Q |
| |
|
|||| ||| ||||||||| |||| ||||| ||||||||||| |||||| | |||| || |||| || |||||||||||||||||||||||||| |
|
|
| T |
11671 |
catgtctcacttaaacttcttgggttatttgaacttatcttgcaacaattttaacggaactataccaatggggactcaacttcaaagttttaatgcatcg |
11770 |
T |
|
| Q |
336 |
agttatattg |
345 |
Q |
| |
|
|| ||||||| |
|
|
| T |
11771 |
agctatattg |
11780 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 154; Significance: 1e-81; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 36 - 358
Target Start/End: Complemental strand, 13665980 - 13665656
Alignment:
| Q |
36 |
gataggcgaactattgacctttcatccaatagcttgtctggagaattgccattggaattgtttcgacttgttcaagttcaaacattgaacttatctcaca |
135 |
Q |
| |
|
||||| |||||||||||||||||| | |||||||||| ||||||||||||| ||||||| |||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
13665980 |
gatagacgaactattgacctttcagctaatagcttgtttggagaattgccactggaattatttcagcttgttcaagttcaaacattgaacttatctcaca |
13665881 |
T |
|
| Q |
136 |
ataatttcattggaacaattccaaagacgattggaggcatgataaatatggaatctctcgatctctctaataataagttttttggtgaaattcctcaaag |
235 |
Q |
| |
|
||||||| | ||||||||| || | ||||||| ||||| | |||||||||| | || ||||||||||||||||||||||||||||||||| || |
|
|
| T |
13665880 |
ataatttgactggaacaatacccctgctaattggagacatgaaacttatggaatctttggacttctctaataataagttttttggtgaaattcctcggag |
13665781 |
T |
|
| Q |
236 |
catggctctcttaaactttttgga--ggtgttgaatttatcttgcaataattttgatggaaaaatcccaacaggaactcaacttcaaagttttaatgcat |
333 |
Q |
| |
|
|||| || |||||| ||||||||| |||||||||||| ||| |||||||| ||||||||||| | ||||||||||||||||||||||||||||| |
|
|
| T |
13665780 |
catgtctatcttaacctttttggaatatatttgaatttatctcacaacaattttgacggaaaaatccctataggaactcaacttcaaagttttaatgcat |
13665681 |
T |
|
| Q |
334 |
caagttatattgggaatcctaaact |
358 |
Q |
| |
|
||||||||||||||||||||||||| |
|
|
| T |
13665680 |
caagttatattgggaatcctaaact |
13665656 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0648 (Bit Score: 151; Significance: 8e-80; HSPs: 1)
Name: scaffold0648
Description:
Target: scaffold0648; HSP #1
Raw Score: 151; E-Value: 8e-80
Query Start/End: Original strand, 36 - 345
Target Start/End: Complemental strand, 3131 - 2821
Alignment:
| Q |
36 |
gataggcgaactattgacctttcatccaatagcttgtctggagaattgccattggaattgtttcgacttgttcaagttcaaacattgaacttatctcaca |
135 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||| || || || ||||||| ||||| |||||||||||||||||||| || |||||||||| |
|
|
| T |
3131 |
gataggcgaactattgacctttcagtcaatagcttgtctggaaaagtgtcaatggaattatttcgtcttgttcaagttcaaacattaaatttatctcaca |
3032 |
T |
|
| Q |
136 |
ataatttcattggaacaattccaaagacgattggaggcatgataaatatggaatctctcgatctctctaataataagttttttggtgaaattcctcaaag |
235 |
Q |
| |
|
|| |||| | ||||||||| |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| |||||||||||||| || |
|
|
| T |
3031 |
atcattttactggaacaataccaaagacgattggaggcatgaaaaatatggagtctctcgatctctctaataataagttttgtggtgaaattcctcggag |
2932 |
T |
|
| Q |
236 |
catggctctcttaaactttttggaggtgttgaatttatcttgcaataattttgatggaaaaat-cccaacaggaactcaacttcaaagttttaatgcatc |
334 |
Q |
| |
|
|||| ||| |||||||||||||| ||||| ||||||||||| |||||| | |||| || || || || |||||||||||||||||||||||||| |
|
|
| T |
2931 |
catgtctcacttaaactttttgggttatttgaacttatcttgcaacaattttaacggaactataccaaatggggactcaacttcaaagttttaatgcatc |
2832 |
T |
|
| Q |
335 |
aagttatattg |
345 |
Q |
| |
|
|| ||||||| |
|
|
| T |
2831 |
gagctatattg |
2821 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0274 (Bit Score: 151; Significance: 8e-80; HSPs: 2)
Name: scaffold0274
Description:
Target: scaffold0274; HSP #1
Raw Score: 151; E-Value: 8e-80
Query Start/End: Original strand, 36 - 345
Target Start/End: Original strand, 21555 - 21865
Alignment:
| Q |
36 |
gataggcgaactattgacctttcatccaatagcttgtctggagaattgccattggaattgtttcgacttgttcaagttcaaacattgaacttatctcaca |
135 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||| || || || ||||||| ||||| |||||||||||||||||||| || |||||||||| |
|
|
| T |
21555 |
gataggcgaactattgacctttcagtcaatagcttgtctggaaaagtgtcaatggaattatttcgtcttgttcaagttcaaacattaaatttatctcaca |
21654 |
T |
|
| Q |
136 |
ataatttcattggaacaattccaaagacgattggaggcatgataaatatggaatctctcgatctctctaataataagttttttggtgaaattcctcaaag |
235 |
Q |
| |
|
|| |||| | ||||||||| |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| |||||||||||||| || |
|
|
| T |
21655 |
atcattttactggaacaataccaaagacgattggaggcatgaaaaatatggagtctctcgatctctctaataataagttttgtggtgaaattcctcggag |
21754 |
T |
|
| Q |
236 |
catggctctcttaaactttttggaggtgttgaatttatcttgcaataattttgatggaaaaat-cccaacaggaactcaacttcaaagttttaatgcatc |
334 |
Q |
| |
|
|||| ||| |||||||||||||| ||||| ||||||||||| |||||| | |||| || || || || |||||||||||||||||||||||||| |
|
|
| T |
21755 |
catgtctcacttaaactttttgggttatttgaacttatcttgcaacaattttaacggaactataccaaatggggactcaacttcaaagttttaatgcatc |
21854 |
T |
|
| Q |
335 |
aagttatattg |
345 |
Q |
| |
|
|| ||||||| |
|
|
| T |
21855 |
gagctatattg |
21865 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0274; HSP #2
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 36 - 345
Target Start/End: Complemental strand, 2600 - 2288
Alignment:
| Q |
36 |
gataggcgaactattgacctttcatccaatagcttgtctggagaattgccattggaattgtttcgacttgttcaagttcaaacattgaacttatctcaca |
135 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||| || || || ||||||| ||||| |||||||||||||||||||| || |||||||||| |
|
|
| T |
2600 |
gataggcgaactattgacctttcagtcaatagcttgtctggaaaagtgtcaatggaattatttcgtcttgttcaagttcaaacattaaatttatctcaca |
2501 |
T |
|
| Q |
136 |
ataatttcattggaacaattccaaagacgattggaggcatgataaatatggaatctctcgatctctctaataataagttttttggtgaaattcctcaaag |
235 |
Q |
| |
|
|| |||| | ||||||||| |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| |||||||||||||| || |
|
|
| T |
2500 |
atcattttactggaacaataccaaagacgattggaggcatgaaaaatatggagtctctcgatctctctaataataagttttgtggtgaaattcctcggag |
2401 |
T |
|
| Q |
236 |
catggctctcttaaactttttggaggt-gttgaatttatcttgcaataattttgatggaaaaat-cccaacaggaactcaacttcaaag-ttttaatgca |
332 |
Q |
| |
|
|||| ||| ||||||||| |||| | ||||| ||||||||||| |||||| | |||| || || || || |||||||||||||| |||||||||| |
|
|
| T |
2400 |
catgtctcacttaaacttcttgggtttatttgaacttatcttgcaacaattttaacggaactataccaaatggggactcaacttcaaagtttttaatgca |
2301 |
T |
|
| Q |
333 |
tcaagttatattg |
345 |
Q |
| |
|
|| || ||||||| |
|
|
| T |
2300 |
tcgagctatattg |
2288 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 131 - 214
Target Start/End: Complemental strand, 1482585 - 1482502
Alignment:
| Q |
131 |
tcacaataatttcattggaacaattccaaagacgattggaggcatgataaatatggaatctctcgatctctctaataataagtt |
214 |
Q |
| |
|
|||||||||||| ||||||||||| ||||| |||||| |||||| |||||||||||||| || ||||||| ||||||||| |
|
|
| T |
1482585 |
tcacaataatttgattggaacaataccaaaagatattggacgcatgaagaatatggaatctcttgacctctctagtaataagtt |
1482502 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 256
Target Start/End: Original strand, 16436366 - 16436435
Alignment:
| Q |
187 |
aatctctcgatctctctaataataagttttttggtgaaattcctcaaagcatggctctcttaaacttttt |
256 |
Q |
| |
|
|||||||||| ||||| ||||||| |||| |||| ||||||||| ||| ||||| ||||||||||||| |
|
|
| T |
16436366 |
aatctctcgacctctcaaataatagcttttgtggtcaaattcctcgaagtatggcagtcttaaacttttt |
16436435 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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