View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19163_low_36 (Length: 273)

Name: NF19163_low_36
Description: NF19163
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19163_low_36
NF19163_low_36
[»] chr7 (47 HSPs)
chr7 (1-257)||(33673053-33673309)
chr7 (4-174)||(19302484-19302650)
chr7 (14-160)||(420349-420495)
chr7 (12-113)||(5947172-5947273)
chr7 (17-99)||(12110352-12110434)
chr7 (4-181)||(17944257-17944434)
chr7 (4-182)||(39907782-39907958)
chr7 (27-180)||(33128755-33128906)
chr7 (4-77)||(46280290-46280363)
chr7 (4-80)||(20526425-20526501)
chr7 (25-183)||(36517579-36517735)
chr7 (24-111)||(25130073-25130160)
chr7 (63-169)||(25670512-25670618)
chr7 (27-128)||(38499879-38499981)
chr7 (18-72)||(47177629-47177683)
chr7 (5-161)||(27863659-27863815)
chr7 (14-174)||(34744017-34744177)
chr7 (14-79)||(44821948-44822013)
chr7 (129-187)||(18962491-18962549)
chr7 (21-102)||(20526921-20527003)
chr7 (116-174)||(33266407-33266464)
chr7 (14-79)||(33678769-33678834)
chr7 (4-85)||(40688996-40689077)
chr7 (14-180)||(45593516-45593684)
chr7 (31-79)||(7244686-7244734)
chr7 (134-174)||(11619079-11619119)
chr7 (22-101)||(6552286-6552365)
chr7 (17-80)||(30535555-30535618)
chr7 (4-71)||(43694594-43694661)
chr7 (18-77)||(45790443-45790502)
chr7 (4-182)||(48470023-48470201)
chr7 (136-174)||(1418530-1418568)
chr7 (23-156)||(19022524-19022657)
chr7 (25-99)||(19719007-19719080)
chr7 (4-86)||(22283753-22283835)
chr7 (4-161)||(33601344-33601500)
chr7 (133-183)||(39771869-39771919)
chr7 (137-174)||(9210933-9210970)
chr7 (18-99)||(46281136-46281217)
chr7 (24-101)||(47559595-47559672)
chr7 (22-102)||(9038109-9038188)
chr7 (26-82)||(12792576-12792632)
chr7 (138-174)||(24975989-24976025)
chr7 (136-180)||(30748949-30748993)
chr7 (14-74)||(40252128-40252188)
chr7 (25-77)||(43648240-43648292)
chr7 (138-174)||(47046029-47046065)
[»] chr5 (68 HSPs)
chr5 (5-183)||(34736439-34736617)
chr5 (18-172)||(9202671-9202825)
chr5 (23-102)||(32703269-32703348)
chr5 (21-170)||(7984965-7985114)
chr5 (4-174)||(16937804-16937974)
chr5 (4-102)||(39105443-39105542)
chr5 (17-102)||(6587100-6587185)
chr5 (18-99)||(7674641-7674722)
chr5 (26-85)||(4014434-4014493)
chr5 (4-79)||(12425550-12425625)
chr5 (19-174)||(36796628-36796782)
chr5 (18-76)||(7319399-7319457)
chr5 (17-79)||(10272447-10272509)
chr5 (32-181)||(10639960-10640109)
chr5 (4-161)||(15246812-15246969)
chr5 (14-80)||(36318763-36318829)
chr5 (21-174)||(41534437-41534587)
chr5 (17-102)||(1619082-1619166)
chr5 (14-102)||(23994708-23994797)
chr5 (14-99)||(25461312-25461397)
chr5 (5-181)||(40426745-40426921)
chr5 (20-85)||(42582907-42582972)
chr5 (14-105)||(25461080-25461172)
chr5 (27-174)||(39594809-39594956)
chr5 (20-80)||(42569753-42569813)
chr5 (20-174)||(41419315-41419468)
chr5 (16-74)||(12494820-12494878)
chr5 (9-174)||(12857259-12857424)
chr5 (23-77)||(29925839-29925893)
chr5 (39-183)||(3932588-3932732)
chr5 (25-98)||(11707055-11707128)
chr5 (25-86)||(32197720-32197781)
chr5 (14-79)||(36326000-36326065)
chr5 (51-174)||(499652-499775)
chr5 (39-182)||(7705911-7706054)
chr5 (58-174)||(14331400-14331515)
chr5 (25-85)||(34160731-34160791)
chr5 (13-56)||(4620181-4620224)
chr5 (40-174)||(9107105-9107239)
chr5 (26-101)||(17258877-17258952)
chr5 (25-79)||(7319024-7319078)
chr5 (39-77)||(12857723-12857761)
chr5 (89-174)||(14932362-14932445)
chr5 (131-161)||(15015949-15015979)
chr5 (17-83)||(28776985-28777051)
chr5 (140-182)||(35299880-35299922)
chr5 (25-182)||(40438867-40439023)
chr5 (20-102)||(41957444-41957526)
chr5 (17-102)||(2568650-2568735)
chr5 (4-101)||(5559704-5559801)
chr5 (58-99)||(12467166-12467207)
chr5 (21-102)||(14674893-14674974)
chr5 (14-99)||(17368665-17368750)
chr5 (21-85)||(29845444-29845509)
chr5 (15-174)||(32009682-32009842)
chr5 (18-99)||(32194075-32194156)
chr5 (26-95)||(42583150-42583219)
chr5 (14-54)||(443924-443964)
chr5 (14-102)||(3977297-3977385)
chr5 (26-102)||(6096546-6096625)
chr5 (18-102)||(14295499-14295583)
chr5 (138-174)||(14706205-14706241)
chr5 (138-174)||(17369316-17369352)
chr5 (137-173)||(22209746-22209782)
chr5 (14-77)||(32372613-32372677)
chr5 (18-66)||(32942611-32942659)
chr5 (14-98)||(41016566-41016650)
chr5 (39-71)||(42569475-42569507)
[»] chr4 (60 HSPs)
chr4 (18-180)||(17822780-17822942)
chr4 (14-181)||(21731570-21731737)
chr4 (39-179)||(29388628-29388768)
chr4 (18-79)||(51630104-51630165)
chr4 (4-180)||(53294029-53294205)
chr4 (39-174)||(2244065-2244200)
chr4 (39-181)||(25904137-25904279)
chr4 (25-179)||(54426043-54426197)
chr4 (4-102)||(55302228-55302327)
chr4 (14-96)||(7694009-7694091)
chr4 (25-174)||(52315118-52315267)
chr4 (18-174)||(24169256-24169412)
chr4 (4-102)||(1407935-1408035)
chr4 (4-84)||(3155582-3155662)
chr4 (21-85)||(40174559-40174623)
chr4 (50-161)||(49939885-49939996)
chr4 (17-84)||(1203127-1203194)
chr4 (14-77)||(16199999-16200062)
chr4 (4-79)||(17884047-17884122)
chr4 (131-174)||(27043751-27043794)
chr4 (14-93)||(35064844-35064923)
chr4 (17-183)||(35571543-35571709)
chr4 (131-182)||(42403936-42403987)
chr4 (4-91)||(50681093-50681180)
chr4 (39-180)||(26780-26920)
chr4 (33-99)||(825486-825552)
chr4 (19-85)||(6364143-6364209)
chr4 (41-174)||(13126497-13126630)
chr4 (136-174)||(32831439-32831477)
chr4 (41-102)||(38515849-38515908)
chr4 (40-97)||(10205908-10205965)
chr4 (17-102)||(30066759-30066844)
chr4 (19-127)||(45214365-45214473)
chr4 (18-99)||(50800026-50800106)
chr4 (14-102)||(55414412-55414501)
chr4 (14-84)||(679244-679311)
chr4 (4-68)||(23503538-23503602)
chr4 (15-91)||(50662742-50662818)
chr4 (131-174)||(8705047-8705090)
chr4 (131-174)||(15173224-15173267)
chr4 (14-77)||(19395134-19395197)
chr4 (18-85)||(28749917-28749984)
chr4 (16-99)||(42121479-42121561)
chr4 (131-182)||(44797986-44798037)
chr4 (25-88)||(47800623-47800686)
chr4 (4-74)||(437265-437335)
chr4 (137-183)||(25571371-25571417)
chr4 (18-68)||(32421098-32421148)
chr4 (4-102)||(52746833-52746931)
chr4 (27-72)||(942131-942176)
chr4 (18-79)||(16494821-16494882)
chr4 (20-77)||(20031744-20031801)
chr4 (136-181)||(22662165-22662210)
chr4 (136-181)||(22666644-22666689)
chr4 (21-82)||(29601021-29601082)
chr4 (18-174)||(23459621-23459776)
chr4 (33-77)||(29912956-29913000)
chr4 (18-102)||(30207564-30207648)
chr4 (17-61)||(49940025-49940069)
chr4 (29-81)||(50004158-50004210)
[»] chr1 (69 HSPs)
chr1 (25-174)||(6292493-6292641)
chr1 (14-126)||(34290225-34290337)
chr1 (4-83)||(7472290-7472369)
chr1 (14-85)||(45975679-45975750)
chr1 (4-99)||(10809324-10809419)
chr1 (14-100)||(7136993-7137079)
chr1 (17-182)||(10199321-10199486)
chr1 (14-98)||(10799451-10799535)
chr1 (4-98)||(4576784-4576878)
chr1 (16-101)||(27820330-27820416)
chr1 (19-96)||(37842354-37842431)
chr1 (14-174)||(2777881-2778040)
chr1 (4-99)||(24915046-24915142)
chr1 (14-102)||(43332473-43332561)
chr1 (4-174)||(3233936-3234106)
chr1 (24-102)||(6102153-6102232)
chr1 (4-102)||(17603376-17603475)
chr1 (18-161)||(31517674-31517817)
chr1 (14-101)||(41195187-41195274)
chr1 (24-102)||(10744300-10744378)
chr1 (18-99)||(4622086-4622167)
chr1 (18-79)||(14629982-14630043)
chr1 (14-102)||(42174844-42174933)
chr1 (17-85)||(17778949-17779017)
chr1 (17-77)||(51695513-51695573)
chr1 (25-100)||(5886989-5887064)
chr1 (39-180)||(2295110-2295251)
chr1 (32-102)||(35925697-35925767)
chr1 (4-85)||(2294890-2294971)
chr1 (19-80)||(32113652-32113713)
chr1 (20-85)||(35179134-35179199)
chr1 (4-98)||(27970290-27970386)
chr1 (18-85)||(6231826-6231893)
chr1 (140-183)||(24460313-24460356)
chr1 (18-101)||(27887112-27887195)
chr1 (38-168)||(37593611-37593741)
chr1 (18-101)||(40943221-40943303)
chr1 (41-79)||(1232921-1232959)
chr1 (4-102)||(1565528-1565626)
chr1 (116-182)||(2295283-2295348)
chr1 (18-80)||(7218089-7218151)
chr1 (25-79)||(14443449-14443503)
chr1 (117-187)||(15784410-15784479)
chr1 (63-184)||(27976642-27976760)
chr1 (14-76)||(39596586-39596648)
chr1 (137-183)||(41505786-41505832)
chr1 (136-174)||(51929383-51929421)
chr1 (19-80)||(5090856-5090917)
chr1 (26-174)||(5741607-5741755)
chr1 (4-85)||(9656629-9656710)
chr1 (14-99)||(12287188-12287273)
chr1 (14-79)||(15558206-15558271)
chr1 (18-99)||(28482229-28482310)
chr1 (53-102)||(30815646-30815695)
chr1 (40-77)||(37631577-37631614)
chr1 (4-77)||(38018382-38018455)
chr1 (4-77)||(47432075-47432147)
chr1 (14-102)||(49938736-49938825)
chr1 (32-99)||(3070086-3070154)
chr1 (39-174)||(5720939-5721074)
chr1 (18-98)||(18420851-18420931)
chr1 (138-174)||(29793619-29793655)
chr1 (18-98)||(30257676-30257756)
chr1 (131-175)||(38115997-38116041)
chr1 (4-79)||(38578506-38578582)
chr1 (39-79)||(43722344-43722384)
chr1 (66-102)||(45999281-45999317)
chr1 (17-77)||(49888759-49888819)
chr1 (27-102)||(51929531-51929607)
[»] chr2 (64 HSPs)
chr2 (17-102)||(680495-680580)
chr2 (18-156)||(18066121-18066259)
chr2 (14-174)||(33319737-33319893)
chr2 (4-161)||(1625879-1626036)
chr2 (38-182)||(4606938-4607082)
chr2 (18-174)||(20952348-20952504)
chr2 (14-85)||(29628753-29628824)
chr2 (26-85)||(40279268-40279327)
chr2 (26-85)||(40279338-40279397)
chr2 (26-85)||(40279408-40279467)
chr2 (86-180)||(42419855-42419948)
chr2 (131-184)||(10619131-10619184)
chr2 (4-77)||(12464491-12464564)
chr2 (14-106)||(33931559-33931651)
chr2 (4-99)||(41851514-41851610)
chr2 (136-183)||(26372639-26372686)
chr2 (19-102)||(29316768-29316851)
chr2 (86-173)||(31561664-31561750)
chr2 (17-101)||(750663-750747)
chr2 (8-80)||(2142636-2142709)
chr2 (31-99)||(3611232-3611301)
chr2 (49-102)||(5902542-5902595)
chr2 (43-182)||(7928211-7928351)
chr2 (24-180)||(9174814-9174970)
chr2 (131-188)||(15305780-15305837)
chr2 (17-174)||(40158710-40158867)
chr2 (18-79)||(42621391-42621452)
chr2 (136-180)||(15370238-15370282)
chr2 (131-183)||(30331857-30331909)
chr2 (23-102)||(43279521-43279601)
chr2 (136-183)||(1830150-1830197)
chr2 (131-174)||(18179055-18179098)
chr2 (18-77)||(18179258-18179317)
chr2 (39-181)||(36534782-36534924)
chr2 (26-80)||(16398115-16398169)
chr2 (27-85)||(19826266-19826324)
chr2 (136-174)||(22878209-22878247)
chr2 (27-77)||(26143658-26143708)
chr2 (137-179)||(27317491-27317533)
chr2 (64-174)||(28677580-28677690)
chr2 (14-183)||(44438753-44438920)
chr2 (14-55)||(579477-579518)
chr2 (4-101)||(1810644-1810740)
chr2 (4-77)||(1893299-1893371)
chr2 (49-102)||(5902605-5902658)
chr2 (40-101)||(12464679-12464740)
chr2 (32-85)||(15977992-15978045)
chr2 (119-172)||(17775389-17775442)
chr2 (23-99)||(26202026-26202103)
chr2 (14-91)||(32592575-32592652)
chr2 (20-72)||(6167306-6167358)
chr2 (18-86)||(11513891-11513959)
chr2 (22-86)||(13736302-13736366)
chr2 (23-95)||(19333325-19333397)
chr2 (18-58)||(25800822-25800862)
chr2 (136-180)||(28803445-28803489)
chr2 (18-102)||(33256733-33256817)
chr2 (66-106)||(33503048-33503088)
chr2 (138-174)||(40059382-40059418)
chr2 (138-174)||(40085282-40085318)
chr2 (136-180)||(40759271-40759315)
chr2 (138-174)||(40837358-40837394)
chr2 (42-161)||(43036574-43036692)
chr2 (32-99)||(45229518-45229586)
[»] chr3 (57 HSPs)
chr3 (4-174)||(20880455-20880625)
chr3 (4-166)||(34610735-34610897)
chr3 (15-174)||(36507013-36507171)
chr3 (14-80)||(50600193-50600259)
chr3 (14-99)||(1816572-1816657)
chr3 (17-102)||(39602203-39602288)
chr3 (14-161)||(30443882-30444029)
chr3 (4-174)||(21367646-21367816)
chr3 (6-96)||(40665410-40665500)
chr3 (4-77)||(35959474-35959547)
chr3 (30-98)||(3845559-3845627)
chr3 (32-170)||(9832680-9832818)
chr3 (4-75)||(46886712-46886783)
chr3 (4-180)||(402457-402633)
chr3 (14-79)||(2719457-2719522)
chr3 (18-102)||(46030983-46031068)
chr3 (16-76)||(44747427-44747487)
chr3 (39-122)||(23808037-23808120)
chr3 (14-85)||(28622009-28622080)
chr3 (18-85)||(36783344-36783411)
chr3 (4-174)||(37795575-37795744)
chr3 (4-179)||(45541550-45541725)
chr3 (14-175)||(18405751-18405912)
chr3 (132-174)||(26990146-26990188)
chr3 (18-99)||(33405162-33405244)
chr3 (26-96)||(41633361-41633431)
chr3 (23-183)||(39980727-39980887)
chr3 (4-77)||(47132310-47132383)
chr3 (28-85)||(48528559-48528616)
chr3 (131-183)||(16072953-16073005)
chr3 (25-97)||(20669172-20669244)
chr3 (14-102)||(54837027-54837115)
chr3 (14-61)||(12862282-12862329)
chr3 (18-97)||(14548719-14548798)
chr3 (136-183)||(20173802-20173849)
chr3 (18-85)||(22343601-22343668)
chr3 (131-174)||(25447166-25447209)
chr3 (14-97)||(33883748-33883831)
chr3 (4-102)||(36631043-36631142)
chr3 (25-76)||(38665308-38665359)
chr3 (1-47)||(25447292-25447338)
chr3 (52-102)||(30923891-30923941)
chr3 (17-102)||(53789453-53789539)
chr3 (18-99)||(2201121-2201202)
chr3 (4-102)||(4401026-4401122)
chr3 (4-85)||(26878096-26878177)
chr3 (137-174)||(26911703-26911740)
chr3 (56-172)||(31365111-31365227)
chr3 (132-173)||(33405114-33405155)
chr3 (17-102)||(36139870-36139955)
chr3 (53-130)||(47132022-47132099)
chr3 (39-122)||(901938-902022)
chr3 (148-188)||(2100086-2100126)
chr3 (136-180)||(22667514-22667558)
chr3 (136-180)||(22724153-22724197)
chr3 (18-82)||(24887296-24887360)
chr3 (137-177)||(46407618-46407658)
[»] chr8 (54 HSPs)
chr8 (15-182)||(30251367-30251534)
chr8 (17-80)||(10114481-10114544)
chr8 (4-102)||(10120735-10120834)
chr8 (16-102)||(27028822-27028909)
chr8 (14-183)||(43717846-43718018)
chr8 (18-79)||(28769355-28769416)
chr8 (4-101)||(37353243-37353340)
chr8 (6-102)||(6509296-6509392)
chr8 (18-174)||(11376696-11376852)
chr8 (26-113)||(31716208-31716296)
chr8 (25-154)||(1930035-1930164)
chr8 (1-158)||(26771241-26771398)
chr8 (32-181)||(35534527-35534676)
chr8 (131-181)||(38602433-38602483)
chr8 (14-79)||(8062318-8062383)
chr8 (14-85)||(2482854-2482923)
chr8 (22-98)||(7514810-7514885)
chr8 (6-128)||(29168023-29168146)
chr8 (14-61)||(32841342-32841389)
chr8 (14-85)||(33714246-33714317)
chr8 (21-88)||(43504747-43504814)
chr8 (14-80)||(38602322-38602388)
chr8 (24-98)||(41442450-41442524)
chr8 (26-99)||(14905613-14905686)
chr8 (14-106)||(18133645-18133738)
chr8 (7-80)||(27049349-27049421)
chr8 (18-79)||(33912126-33912187)
chr8 (49-161)||(1058011-1058122)
chr8 (18-78)||(9956831-9956891)
chr8 (58-102)||(13459678-13459722)
chr8 (39-79)||(31916618-31916658)
chr8 (39-181)||(3536859-3537001)
chr8 (4-55)||(24558832-24558883)
chr8 (18-101)||(30389092-30389175)
chr8 (18-85)||(31705078-31705145)
chr8 (136-174)||(4560613-4560651)
chr8 (18-100)||(11795085-11795167)
chr8 (4-70)||(15180520-15180586)
chr8 (18-84)||(30013211-30013277)
chr8 (13-51)||(31891879-31891917)
chr8 (8-98)||(34849086-34849176)
chr8 (31-77)||(44236841-44236887)
chr8 (58-99)||(3161619-3161660)
chr8 (135-176)||(11183653-11183694)
chr8 (25-102)||(11569450-11569527)
chr8 (39-100)||(20672764-20672825)
chr8 (15-80)||(36338277-36338342)
chr8 (138-174)||(2606162-2606198)
chr8 (66-102)||(7878519-7878555)
chr8 (24-128)||(27754403-27754507)
chr8 (17-85)||(31862485-31862553)
chr8 (18-82)||(31884587-31884650)
chr8 (44-183)||(35643900-35644039)
chr8 (14-102)||(42215299-42215387)
[»] chr6 (35 HSPs)
chr6 (20-102)||(31624085-31624167)
chr6 (4-100)||(2735048-2735145)
chr6 (14-149)||(20368127-20368261)
chr6 (4-101)||(9093549-9093647)
chr6 (14-102)||(34430453-34430542)
chr6 (14-91)||(6536604-6536681)
chr6 (23-79)||(835265-835321)
chr6 (4-56)||(11784069-11784121)
chr6 (14-106)||(14926779-14926871)
chr6 (16-174)||(24982696-24982854)
chr6 (17-99)||(10616709-10616790)
chr6 (4-97)||(415283-415376)
chr6 (25-161)||(2455259-2455395)
chr6 (18-102)||(2027399-2027483)
chr6 (131-183)||(21405066-21405118)
chr6 (40-80)||(31624956-31624996)
chr6 (18-85)||(4246403-4246470)
chr6 (4-75)||(6909892-6909963)
chr6 (6-53)||(9604830-9604877)
chr6 (44-102)||(9912183-9912242)
chr6 (131-182)||(35069525-35069576)
chr6 (18-96)||(8364975-8365053)
chr6 (17-102)||(283087-283172)
chr6 (20-77)||(837234-837291)
chr6 (18-99)||(1402989-1403070)
chr6 (14-79)||(9109267-9109332)
chr6 (18-59)||(10016538-10016579)
chr6 (136-181)||(12111078-12111123)
chr6 (35-155)||(31813171-31813291)
chr6 (18-59)||(33074993-33075034)
chr6 (25-101)||(6647387-6647463)
chr6 (13-77)||(19800454-19800518)
chr6 (39-79)||(29754115-29754155)
chr6 (137-181)||(30536879-30536923)
chr6 (38-102)||(34939757-34939821)
[»] scaffold0221 (1 HSPs)
scaffold0221 (4-102)||(22210-22309)
[»] scaffold0024 (1 HSPs)
scaffold0024 (25-85)||(21296-21355)
[»] scaffold0018 (1 HSPs)
scaffold0018 (4-78)||(178342-178416)


Alignment Details
Target: chr7 (Bit Score: 253; Significance: 1e-141; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 253; E-Value: 1e-141
Query Start/End: Original strand, 1 - 257
Target Start/End: Original strand, 33673053 - 33673309
Alignment:
Q  1 aacttaaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagc 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  33673053 aacttaaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaacaagctgaaaacagtttataaaaatgtcataagc 33673152  T
Q  101 tgatttaaaaagtgttcccaaatagtcttaacaaagcttatgtcagtagataagctcaaatgagtcaatccaaaaaggccctaggtccacatctggatag 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33673153 tgatttaaaaagtgttcccaaatagtcttaacaaagcttatgtcagtagataagctcaaatgagtcaatccaaaaaggccctaggtccacatctggatag 33673252  T
Q  201 aatgtgcacgcgaatacttattagctagaggtaaaatacttttgaaaatgtgcattt 257  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33673253 aatgtgcacgcgaatacttattagctagaggtaaaatacttttgaaaatgtgcattt 33673309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 4 - 174
Target Start/End: Complemental strand, 19302650 - 19302484
Alignment:
Q  4 ttaaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaat-gtcataagctg 102  Q
    ||||||| | |||||||| | |||||| |||||  ||||||||||    |||| |||| |||||||| |||||| ||||||| ||||| |||||||||||    
T  19302650 ttaaattgtttttgtatatgttataagttgtttttataagctata----agaacttatgaaaataagttgaaaaaagtttatgaaaattgtcataagctg 19302555  T
Q  103 atttaaaaagtgttcccaaatagtcttaacaaagcttatgtcagtagataagctcaaatgagtcaatccaaa 174  Q
     ||| | || |  ||||||||| ||| | |||| ||||||||||||||||||||||||| ||||||| ||||    
T  19302554 ttttcataaattctcccaaatattctca-caaaacttatgtcagtagataagctcaaataagtcaattcaaa 19302484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 14 - 160
Target Start/End: Original strand, 420349 - 420495
Alignment:
Q  14 tttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacag-tttataaaaatgtcataagctgatttaaaaag 112  Q
    |||||||| |||||||| ||||||| ||||||||||||||||| |||| |||||||| ||||||  | |||| |||| ||||||||  || ||| | |||    
T  420349 tttgtatatgctataagttgtttccgtaagctatattggagaacttatgaaaataagttgaaaaaggctttagaaaactgtcataaattgttttcataag 420448  T
Q  113 tgttcccaaatagtcttaacaaagcttatgtcagtagataagctcaaa 160  Q
    |  ||||||| |||| | |||||||||| | ||||||| |||||||||    
T  420449 ttctcccaaacagtc-tcacaaagcttaagccagtagacaagctcaaa 420495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 12 - 113
Target Start/End: Original strand, 5947172 - 5947273
Alignment:
Q  12 tatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataagctgatttaaaa 110  Q
    ||||||||||| ||||||||||| | |||||||||| | |||||| |||| ||||||||||||||| || |||| ||||||| ||||||||| ||| |||    
T  5947172 tatttgtataa-ctataagctgtattcataagctatctaggagaagttatgaaaataagctgaaaagagcttatgaaaaatgccataagctggtttcaaa 5947270  T
Q  111 agt 113  Q
    |||    
T  5947271 agt 5947273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 99
Target Start/End: Original strand, 12110352 - 12110434
Alignment:
Q  17 gtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataag 99  Q
    |||||||||||||||||||| |||||||||| ||| |||| |||| ||||||| || |||||||||| | || ||||||||||    
T  12110352 gtataagctataagctgttttcataagctatcttgaagaacttatgaaaataatctaaaaacagtttgtgaacatgtcataag 12110434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 181
Target Start/End: Complemental strand, 17944434 - 17944257
Alignment:
Q  4 ttaaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataagctg 102  Q
    ||||||| | |||||||| | | |||| ||||| |||||| ||| ||||| ||||||| ||| ||||||||||| ||  ||| |||| ||||||||||||    
T  17944434 ttaaattgtttttgtatatgttgtaagttgttttcataagttatcttggataatttatgaaattaagctgaaaaaagcatatgaaaagtgtcataagctg 17944335  T
Q  103 atttaaaaagtgttcccaaatagtcttaacaaagcttatgtcagtagataagctcaaatgagtcaatccaaaaaggccc 181  Q
     ||| | ||||  ||  ||| |||| | |||||||||||| ||||||||||||| |||| ||||| |||||| ||||||    
T  17944334 tttttataagttgtctgaaacagtc-tcacaaagcttatgccagtagataagcttaaataagtcactccaaacaggccc 17944257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 182
Target Start/End: Original strand, 39907782 - 39907958
Alignment:
Q  4 ttaaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagctga 103  Q
    ||||||| | |||||||||||||||| |||||| ||||| |||| || ||||| | || |||||||||||||||||| | || || ||| |||||||| |    
T  39907782 ttaaattgtttttgtataagctataaactgttttcataaactatcttagagaactaatgaaaataagctgaaaacagctaatgaacatg-cataagctca 39907880  T
Q  104 tttaaaaagtgttcccaaatagtcttaacaaagcttatgtcagtagataagctcaaatgagtcaatccaaaaaggccct 182  Q
    ||| | ||||  || |||| |||| | ||||| |||||  | ||| ||||||||||||||  ||||||||| |||||||    
T  39907881 ttttacaagttctctcaaacagtc-tcacaaaacttatccctgtatataagctcaaatgaaccaatccaaacaggccct 39907958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 27 - 180
Target Start/End: Original strand, 33128755 - 33128906
Alignment:
Q  27 taagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagctgatttaaaaagtgttcccaaatagt 126  Q
    |||||||||| ||||| ||||||||||||| || | |||||||||| |||| || |||||||| |||||| ||| | ||| | || | |||||||| | |    
T  33128755 taagctgtttacataaactatattggagaacttgtgaaaataagctaaaaaaagcttataaaattgtcatcagcagttttcataact-ttcccaaacaat 33128853  T
Q  127 cttaacaaagcttatgtcagtagataagctcaaatgagtcaatccaaaaaggcc 180  Q
    ||| ||||| |||| || || | |||||||||||| |||||||||||| |||||    
T  33128854 ctt-acaaaacttaagttagcatataagctcaaataagtcaatccaaacaggcc 33128906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 4 - 77
Target Start/End: Complemental strand, 46280363 - 46280290
Alignment:
Q  4 ttaaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaa 77  Q
    ||||||| | |||||||| ||||||||||||||  |||||||||||||||||| |||| |||||| ||||||||    
T  46280363 ttaaattgtttttgtatatgctataagctgtttttataagctatattggagaacttatgaaaataggctgaaaa 46280290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 4 - 80
Target Start/End: Original strand, 20526425 - 20526501
Alignment:
Q  4 ttaaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacag 80  Q
    ||||||||| |||||| | |||||||||||||| |||||||||| |||||||| | || |||||||||| |||||||    
T  20526425 ttaaattatgtttgtacatgctataagctgttttcataagctattttggagaactaatgaaaataagctaaaaacag 20526501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 25 - 183
Target Start/End: Original strand, 36517579 - 36517735
Alignment:
Q  25 tataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaa-aatgtcataagctgatttaaaaagtgttcccaaat 123  Q
    ||||| || ||| |||||||||| |||||||| |||| ||||||| ||||||| || |||| || |||||||  ||||| ||||| ||||  |||||||     
T  36517579 tataaactattttcataagctatcttggagaaattatgaaaataaactgaaaatagcttatgaacaatgtca--agctgttttaataagttctcccaaac 36517676  T
Q  124 agtcttaacaaagcttatgtcagtagataagctcaaatgagtcaatccaaaaaggcccta 183  Q
    |||||||  ||| |||||| |||||| ||||||||||| | | |||||||| ||||||||    
T  36517677 agtcttagaaaa-cttatgccagtagctaagctcaaataaatgaatccaaacaggcccta 36517735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 24 - 111
Target Start/End: Complemental strand, 25130160 - 25130073
Alignment:
Q  24 ctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagctgatttaaaaa 111  Q
    ||||||||||||| || ||||||| ||||| ||||| | |||||| ||||||||||| |||| || ||||||||| ||| ||||||||    
T  25130160 ctataagctgttttcaaaagctatcttggaaaatttctgaaaatatgctgaaaacagcttatgaacatgtcataaactgttttaaaaa 25130073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 63 - 169
Target Start/End: Complemental strand, 25670618 - 25670512
Alignment:
Q  63 aaaataagctgaaaacagtttataaaaatgtcataagctgatttaaaaagtgttcccaaatagtcttaacaaagcttatgtcagtagataagctcaaatg 162  Q
    ||||||||||||||||| ||||| || |||||||||| || ||| | |||| ||| |||| ||||| |  | ||||||||||| ||||||||||||| |     
T  25670618 aaaataagctgaaaacaatttattaacatgtcataagttgttttcataagttttctcaaacagtctcacaagagcttatgtcaatagataagctcaagta 25670519  T
Q  163 agtcaat 169  Q
    |||||||    
T  25670518 agtcaat 25670512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 27 - 128
Target Start/End: Complemental strand, 38499981 - 38499879
Alignment:
Q  27 taagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataagctgatttaaaaagtgttcccaaatag 125  Q
    |||||||| | ||||||| || |||||||| |||| ||||||||||| ||| || |||| ||||||||||||||||| ||| ||||||  ||||||| ||    
T  38499981 taagctgtcttcataagcaatcttggagaacttatgaaaataagctggaaaaagcttatgaaaaatgtcataagctgttttgaaaagttctcccaaagag 38499882  T
Q  126 tct 128  Q
    |||    
T  38499881 tct 38499879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 47177629 - 47177683
Alignment:
Q  18 tataagctataagctgtttccataagctatattggagaatttataaaaataagct 72  Q
    ||||||||||||||||||| || ||||||| ||||||||||||| ||||||||||    
T  47177629 tataagctataagctgttttcaaaagctatcttggagaatttatgaaaataagct 47177683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 161
Target Start/End: Complemental strand, 27863815 - 27863659
Alignment:
Q  5 taaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataagctga 103  Q
    |||||| |||||||||| |||||||| |||||  |||| ||||||| ||||| |||| || |||||||||||| ||||| | |||| | ||  ||||||     
T  27863815 taaattttatttgtatatgctataagttgttttaataaactatattagagaacttatgaacataagctgaaaaaagtttttgaaaattttctcaagctgt 27863716  T
Q  104 tttaaaaagtgttcccaaatagtcttaacaaagcttatgtcagtagataagctcaaat 161  Q
    ||| | ||||  || ||||||||| | ||||| |||||| |||| |||||||||||||    
T  27863715 tttcataagttctctcaaatagtc-tcacaaaacttatgccagtggataagctcaaat 27863659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 174
Target Start/End: Original strand, 34744017 - 34744177
Alignment:
Q  14 tttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataagctgatttaaaaag 112  Q
    |||||||| | |||||| ||||| ||||||||||||||||||| |||||||||||||  ||||| || || | |||| ||||||||| |  ||| |  ||    
T  34744017 tttgtatatggtataagttgttttcataagctatattggagaacttataaaaataaggcgaaaaaagcttgtgaaaattgtcataagttcttttcattag 34744116  T
Q  113 tgttcccaaatagtcttaacaaagcttatgtcagtagataagctcaaatgagtcaatccaaa 174  Q
    |  | ||||| |||| | ||||| ||||||| ||||||||||||||||| | ||||| ||||    
T  34744117 ttcttccaaacagtc-tcacaaatcttatgttagtagataagctcaaattattcaattcaaa 34744177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 79
Target Start/End: Original strand, 44821948 - 44822013
Alignment:
Q  14 tttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaaca 79  Q
    |||||||||| |||||||||||| ||||||||||  ||||||| |||| |||||||| ||||||||    
T  44821948 tttgtataagttataagctgttttcataagctattctggagaacttatgaaaataagttgaaaaca 44822013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 129 - 187
Target Start/End: Complemental strand, 18962549 - 18962491
Alignment:
Q  129 taacaaagcttatgtcagtagataagctcaaatgagtcaatccaaaaaggccctaggtc 187  Q
    ||||||| |||||||||||||||||| || ||| | |||||||||| ||||||||||||    
T  18962549 taacaaaacttatgtcagtagataagatcgaataactcaatccaaacaggccctaggtc 18962491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 102
Target Start/End: Complemental strand, 20527003 - 20526921
Alignment:
Q  21 aagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaa-aatgtcataagctg 102  Q
    |||||| ||||||||| ||||||||||| || |||| |||| ||||||||||||||| |  ||||||| ||| ||||||||||    
T  20527003 aagctacaagctgttttcataagctatagtgtagaacttatgaaaataagctgaaaagatcttataaacaatctcataagctg 20526921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 116 - 174
Target Start/End: Complemental strand, 33266464 - 33266407
Alignment:
Q  116 tcccaaatagtcttaacaaagcttatgtcagtagataagctcaaatgagtcaatccaaa 174  Q
    ||||||||||| || ||||| |||||||| |||||||||||||||| ||||||||||||    
T  33266464 tcccaaatagt-ttcacaaaacttatgtcggtagataagctcaaataagtcaatccaaa 33266407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 14 - 79
Target Start/End: Original strand, 33678769 - 33678834
Alignment:
Q  14 tttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaaca 79  Q
    |||||| |||||||||||||||| |||||||||| ||||| || || | |||||||| ||||||||    
T  33678769 tttgtaaaagctataagctgttttcataagctatcttggaaaacttgtgaaaataagttgaaaaca 33678834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 85
Target Start/End: Complemental strand, 40689077 - 40688996
Alignment:
Q  4 ttaaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat 85  Q
    ||||||||| ||  ||||||||||||||||| | ||||||||||  |||| || |||| |||||||||| ||||||| ||||    
T  40689077 ttaaattattttcatataagctataagctgtgttcataagctatcctggataacttatgaaaataagctcaaaacagcttat 40688996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 14 - 180
Target Start/End: Original strand, 45593516 - 45593684
Alignment:
Q  14 tttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctg-aaaacagtttat-aaaaatgtcataagctgatttaaaaa 111  Q
    |||||||| |||||||||| |||   |||||||| |||||||| |||  ||||||| ||| |||| || |||| ||||||||||| || || ||| | ||    
T  45593516 tttgtatatgctataagctatttttctaagctatcttggagaacttacgaaaataaactggaaaaaagcttatgaaaaatgtcatcagatgtttttataa 45593615  T
Q  112 gtgttcccaaatagtcttaacaaagcttatgtcagt-agataagctcaaatgagtcaatccaaaaaggcc 180  Q
    ||  ||||||| ||||| | |||||||||||||||| | |||| ||||||| || ||||||||| |||||    
T  45593616 gttctcccaaacagtctca-caaagcttatgtcagtaatataaactcaaataagccaatccaaacaggcc 45593684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 79
Target Start/End: Original strand, 7244686 - 7244734
Alignment:
Q  31 ctgtttccataagctatattggagaatttataaaaataagctgaaaaca 79  Q
    |||||| ||||||||||||||||||  |||| |||||||||||||||||    
T  7244686 ctgttttcataagctatattggagagcttatgaaaataagctgaaaaca 7244734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 134 - 174
Target Start/End: Complemental strand, 11619119 - 11619079
Alignment:
Q  134 aagcttatgtcagtagataagctcaaatgagtcaatccaaa 174  Q
    |||||||||||||||||||||||||||| || |||||||||    
T  11619119 aagcttatgtcagtagataagctcaaataagccaatccaaa 11619079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 101
Target Start/End: Complemental strand, 6552365 - 6552286
Alignment:
Q  22 agctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagct 101  Q
    |||||||| || ||| ||||| ||||  || ||| ||||| |||||||||||||||||| |||| || ||||||||||||    
T  6552365 agctataaactattttcataaactatcatgcagagtttatgaaaataagctgaaaacagcttatgaatatgtcataagct 6552286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 17 - 80
Target Start/End: Original strand, 30535555 - 30535618
Alignment:
Q  17 gtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacag 80  Q
    |||||| |||||||||||||||||||||||| ||  ||||  ||| ||||||| ||||||||||    
T  30535555 gtataatctataagctgtttccataagctatcttatagaacatatgaaaataacctgaaaacag 30535618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 43694661 - 43694594
Alignment:
Q  4 ttaaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagc 71  Q
    ||||||| | |||||||| ||||||||||||||  ||||||||||| | |||| |||| |||||||||    
T  43694661 ttaaattgtttttgtatatgctataagctgtttttataagctatatcgaagaacttatgaaaataagc 43694594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 45790502 - 45790443
Alignment:
Q  18 tataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaa 77  Q
    ||||||||||||| |||||  |||| |||||||||| || |||| |||||||||||||||    
T  45790502 tataagctataagttgtttttataaactatattggataacttatgaaaataagctgaaaa 45790443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 182
Target Start/End: Original strand, 48470023 - 48470201
Alignment:
Q  4 ttaaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataagctg 102  Q
    ||||||| | ||||||||   |||||| ||||| |||||||||| ||| | || |||| || ||||||| |||| || |||| ||||||| |||||||||    
T  48470023 ttaaattgtttttgtatataatataagttgttttcataagctattttgaataacttatgaacataagctcaaaaaagcttatgaaaaatgccataagctg 48470122  T
Q  103 atttaaaaagtgttcccaaatagtcttaacaaagcttatgtcagtagataagctcaaatgagtcaatccaaaaaggccct 182  Q
     ||| | ||||  ||||||| | ||| |  ||| ||||||||  ||||||||||||||| || |||||| || |||||||    
T  48470123 ttttcataagttctcccaaacaatctcataaaa-cttatgtctatagataagctcaaataagccaatcctaacaggccct 48470201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 174
Target Start/End: Original strand, 1418530 - 1418568
Alignment:
Q  136 gcttatgtcagtagataagctcaaatgagtcaatccaaa 174  Q
    ||||||| |||||||||||||||||| ||||||||||||    
T  1418530 gcttatgccagtagataagctcaaataagtcaatccaaa 1418568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 156
Target Start/End: Complemental strand, 19022657 - 19022524
Alignment:
Q  23 gctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataagctgatttaaaaagtgttcccaa 121  Q
    |||||||| |||||  |||||||||||||||||| |||| |||||||| |||| |||  |||| |||| ||||||||| || ||| | || |  ||||||    
T  19022657 gctataagttgtttttataagctatattggagaacttatgaaaataagttgaagacaacttatgaaaattgtcataagttgttttcataaattctcccaa 19022558  T
Q  122 atagtcttaacaaagcttatgtcagtagataagct 156  Q
    | | || | ||||| || |||||||||||||||||    
T  19022557 acaatc-tcacaaaactcatgtcagtagataagct 19022524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 99
Target Start/End: Original strand, 19719007 - 19719080
Alignment:
Q  25 tataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataag 99  Q
    |||||| ||||| ||||| |||| |||||  | ||||||| |||||||||||||||||||| || ||||||||||    
T  19719007 tataagttgttttcataa-ctatcttggatcacttataaagataagctgaaaacagtttatgaacatgtcataag 19719080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 86
Target Start/End: Complemental strand, 22283835 - 22283753
Alignment:
Q  4 ttaaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttata 86  Q
    ||||||| | ||||||| |||||||| |||||| ||||| | || || ||||| ||||  ||||||||||||||||| |||||    
T  22283835 ttaaattgtttttgtatcagctataaactgttttcataaaccatcttagagaacttatggaaataagctgaaaacagcttata 22283753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 161
Target Start/End: Complemental strand, 33601500 - 33601344
Alignment:
Q  4 ttaaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataagctg 102  Q
    ||||||||| |||||||  |||||||| |||||  ||||||||| || ||||| |||| ||  ||||||||||| || |||| |||| ||||||||||||    
T  33601500 ttaaattatttttgtatttgctataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctg 33601402  T
Q  103 atttaaaaagtgttcccaaatagtcttaacaaagcttatgtcagtagataagctcaaat 161  Q
     ||| | ||||  ||  ||| |||| | ||||| |||||| || |||||||||||||||    
T  33601401 ttttcataagttctcgaaaagagtc-tcacaaaacttatgccaatagataagctcaaat 33601344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 183
Target Start/End: Original strand, 39771869 - 39771919
Alignment:
Q  133 aaagcttatgtcagtagataagctcaaatgagtcaatccaaaaaggcccta 183  Q
    ||||||||||||| ||||||||||||||| | |||| ||||| ||||||||    
T  39771869 aaagcttatgtcaatagataagctcaaataactcaacccaaacaggcccta 39771919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 137 - 174
Target Start/End: Original strand, 9210933 - 9210970
Alignment:
Q  137 cttatgtcagtagataagctcaaatgagtcaatccaaa 174  Q
    ||||| ||||||||||||||||||| ||||||||||||    
T  9210933 cttatatcagtagataagctcaaataagtcaatccaaa 9210970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 99
Target Start/End: Complemental strand, 46281217 - 46281136
Alignment:
Q  18 tataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataag 99  Q
    |||| ||||||||||||||  |||||||||  |||||   ||||| |||||||||||||||| |||||| | ||| ||||||    
T  46281217 tataggctataagctgtttttataagctattctggagggcttatataaataagctgaaaacaatttatagacatggcataag 46281136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 24 - 101
Target Start/End: Complemental strand, 47559672 - 47559595
Alignment:
Q  24 ctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagct 101  Q
    ||||||||||||| |||||| ||| |||||||| |||| ||||| ||| |||||||  |||| || |||||| |||||    
T  47559672 ctataagctgttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaacatgtcaaaagct 47559595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 102
Target Start/End: Original strand, 9038109 - 9038188
Alignment:
Q  22 agctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagctg 102  Q
    |||||||| |||||| ||||| ||||  ||||||| || | |||||||||||||||||  |||| || |||||||||||||    
T  9038109 agctataaactgttttcataaactatcatggagaacttgtgaaaataagctgaaaaca-attatgaacatgtcataagctg 9038188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 12792632 - 12792576
Alignment:
Q  26 ataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtt 82  Q
    ||||||| ||| |||||||||| ||| |||  |||| ||||||||||||||||||||    
T  12792632 ataagctattttcataagctatcttgaagagcttatgaaaataagctgaaaacagtt 12792576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 174
Target Start/End: Original strand, 24975989 - 24976025
Alignment:
Q  138 ttatgtcagtagataagctcaaatgagtcaatccaaa 174  Q
    |||||| ||||||||||||||||| ||||||||||||    
T  24975989 ttatgttagtagataagctcaaattagtcaatccaaa 24976025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 180
Target Start/End: Complemental strand, 30748993 - 30748949
Alignment:
Q  136 gcttatgtcagtagataagctcaaatgagtcaatccaaaaaggcc 180  Q
    |||||||||||||||||||||||||| | ||||| |||| |||||    
T  30748993 gcttatgtcagtagataagctcaaataactcaattcaaacaggcc 30748949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 74
Target Start/End: Complemental strand, 40252188 - 40252128
Alignment:
Q  14 tttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctga 74  Q
    |||||||| | |||||||| ||| |||||| ||| |||||||| |||| ||||||||||||    
T  40252188 tttgtatatgttataagctcttttcataagttatcttggagaacttatgaaaataagctga 40252128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 77
Target Start/End: Original strand, 43648240 - 43648292
Alignment:
Q  25 tataagctgtttccataagctatattggagaatttataaaaataagctgaaaa 77  Q
    |||||||||||| |||||||||| ||||||||  ||| |||||||| ||||||    
T  43648240 tataagctgttttcataagctatcttggagaaaatatgaaaataagttgaaaa 43648292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 174
Target Start/End: Complemental strand, 47046065 - 47046029
Alignment:
Q  138 ttatgtcagtagataagctcaaatgagtcaatccaaa 174  Q
    |||||||||||||||||| ||||| ||||||||||||    
T  47046065 ttatgtcagtagataagcacaaataagtcaatccaaa 47046029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 64; Significance: 5e-28; HSPs: 68)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 5 - 183
Target Start/End: Complemental strand, 34736617 - 34736439
Alignment:
Q  5 taaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaa-taagctgaaaacagtttataaaaatgtcataagctga 103  Q
    |||||||| |||||||||||||||| |||||  ||| |||||| ||||||||||||||||||  |||||| |||||| ||||||| ||||||| |||||     
T  34736617 taaattatttttgtataagctataaactgttatcattagctatcttggagaatttataaaaacaaagctgtaaacagcttataaacatgtcattagctgt 34736518  T
Q  104 tttaaaaagtgttcccaaatagtcttaacaaagcttatgtcagtagataagctcaaatgagtcaatccaaaaaggcccta 183  Q
     || ||||||  |||||||  ||| | ||||| |||||||||  |||||||||||||| |||||||||||| | ||||||    
T  34736517 gttcaaaagttctcccaaactgtc-tcacaaaacttatgtcaccagataagctcaaataagtcaatccaaacatgcccta 34736439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 18 - 172
Target Start/End: Complemental strand, 9202825 - 9202671
Alignment:
Q  18 tataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataagctgatttaaaaagtgtt 116  Q
    ||||||| ||||||||||| |||||| ||| ||| |||| |||| ||||||||||| |||||| |||| || |||||||||||||| ||  |  ||| ||    
T  9202825 tataagcaataagctgttttcataagttatcttgaagaacttatgaaaataagctggaaacagcttatgaacaatgtcataagctgtttccattagtttt 9202726  T
Q  117 cccaaatagtcttaacaaagcttatgtcagtagataagctcaaatgagtcaatcca 172  Q
    || |||||||||| ||||| |||||| ||| |||||||||||||| ||||||||||    
T  9202725 ccgaaatagtctt-acaaaacttatgccaggagataagctcaaataagtcaatcca 9202671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 23 - 102
Target Start/End: Complemental strand, 32703348 - 32703269
Alignment:
Q  23 gctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagctg 102  Q
    |||||||| ||||| |||||||||| | ||||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  32703348 gctataagttgttttcataagctatctaggagaatttataaaaataagctgaaaacagtttataaacgtgtcataagctg 32703269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 21 - 170
Target Start/End: Original strand, 7984965 - 7985114
Alignment:
Q  21 aagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataagctgatttaaaaagtgttccc 119  Q
    |||||||||||| ||| |||||||||| ||||||||||||| |||||||||||||||||| |||| || || |||| |||||| |||   |||   ||||    
T  7984965 aagctataagcttttttcataagctatcttggagaatttatgaaaataagctgaaaacagcttatgaacaacgtcacaagctgttttcttaagctctccc 7985064  T
Q  120 aaatagtcttaacaaagcttatgtcagtagataagctcaaatgagtcaatc 170  Q
    |||||||| | |||||||||||| |||||||||| ||||||| || |||||    
T  7985065 aaatagtc-tcacaaagcttatgccagtagataatctcaaattagccaatc 7985114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 174
Target Start/End: Complemental strand, 16937974 - 16937804
Alignment:
Q  4 ttaaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataagctg 102  Q
    ||||||| | |||||||| |||||||| |||||  ||| |||||||||||||| |||  ||||||||||||||| || |||| |||  ||||||||||||    
T  16937974 ttaaattgtttttgtatatgctataagttgtttttatacgctatattggagaacttaggaaaataagctgaaaaaagcttatgaaatttgtcataagctg 16937875  T
Q  103 atttaaaaagtgttcccaaatagtcttaacaaagcttatgtcagtagataagctcaaatgagtcaatccaaa 174  Q
     ||| | ||||  | ||||| | || | ||||| ||||||  ||||||||||||||||| || |||||||||    
T  16937874 ttttcataagttcttccaaacactc-tcacaaaacttatgctagtagataagctcaaataagccaatccaaa 16937804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 102
Target Start/End: Original strand, 39105443 - 39105542
Alignment:
Q  4 ttaaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataagctg 102  Q
    ||||||| | || ||||||||||||| |||||| |||||||||| |||||||| |||| |||||||||| |||| || |||| || ||||||||||||||    
T  39105443 ttaaattgttttcgtataagctataatctgttttcataagctatcttggagaacttatgaaaataagctaaaaatagcttatgaacaatgtcataagctg 39105542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 17 - 102
Target Start/End: Complemental strand, 6587185 - 6587100
Alignment:
Q  17 gtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagctg 102  Q
    |||||||||||||| ||||| ||||||||||| ||||||| || | ||||||||||| |||||| |||| ||  ||||||||||||    
T  6587185 gtataagctataagttgttttcataagctatagtggagaacttgtgaaaataagctgtaaacagcttatgaacctgtcataagctg 6587100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 99
Target Start/End: Original strand, 7674641 - 7674722
Alignment:
Q  18 tataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataag 99  Q
    ||||||| ||||  ||||| |||||||||| ||||||||||| | |||||||||||||||||  ||||||| ||||||||||    
T  7674641 tataagccataaaatgttttcataagctatcttggagaatttgtgaaaataagctgaaaacaccttataaacatgtcataag 7674722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 85
Target Start/End: Complemental strand, 4014493 - 4014434
Alignment:
Q  26 ataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat 85  Q
    ||||||||||| |||||||||| |||||||| |||| |||||||||||||||||| ||||    
T  4014493 ataagctgttttcataagctatcttggagaacttatgaaaataagctgaaaacagcttat 4014434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 79
Target Start/End: Original strand, 12425550 - 12425625
Alignment:
Q  4 ttaaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaaca 79  Q
    ||||||| | || |||||||||||||||||||| || ||||||| |||||||| |||| |||||||| ||||||||    
T  12425550 ttaaattgttttcgtataagctataagctgttttcacaagctatcttggagaacttatgaaaataagttgaaaaca 12425625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 174
Target Start/End: Complemental strand, 36796782 - 36796628
Alignment:
Q  19 ataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagctgatttaaaaagtgttcc 118  Q
    |||||||||||||||||| |||  ||||||||||| || ||| |||||||| |||||||||| |||| ||  |||  ||| ||| ||| |||||| || |    
T  36796782 ataagctataagctgttttcatttgctatattggaaaacttacaaaaataaactgaaaacagcttatgaacgtgtagtaaactg-tttcaaaagtttttc 36796684  T
Q  119 caaatagtcttaacaaagcttatgtcagtagataagctcaaatgagtcaatccaaa 174  Q
    |||  ||||| |  |  | |||||||| ||||||||||||||| ||||||||||||    
T  36796683 caagcagtctcacaagtgtttatgtcattagataagctcaaataagtcaatccaaa 36796628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 7319399 - 7319457
Alignment:
Q  18 tataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaa 76  Q
    |||||||||||| |||||| | |||||||| |||||||| |||||||||||||||||||    
T  7319399 tataagctataaactgttttcgtaagctatcttggagaacttataaaaataagctgaaa 7319457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 17 - 79
Target Start/End: Complemental strand, 10272509 - 10272447
Alignment:
Q  17 gtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaaca 79  Q
    |||||||||||||| ||||| ||||||| || ||||||| ||||| |||||||||||||||||    
T  10272509 gtataagctataagttgttttcataagccatcttggagagtttatgaaaataagctgaaaaca 10272447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 32 - 181
Target Start/End: Original strand, 10639960 - 10640109
Alignment:
Q  32 tgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataagctgatttaaaaagtgttcccaaatagtctta 130  Q
    ||||| ||||| |||| |||||||| |||| ||||||||||  ||| || |||| ||||||||||||||||| ||| | ||||  ||||||| | |  |     
T  10639960 tgtttacataaactattttggagaacttatgaaaataagctagaaaaagcttatgaaaaatgtcataagctgttttcataagttctcccaaacaat-atc 10640058  T
Q  131 acaaagcttatgtcagtagataagctcaaatgagtcaatccaaaaaggccc 181  Q
    ||||| ||||||||||||||||| ||||||| ||  |||||||| ||||||    
T  10640059 acaaaacttatgtcagtagataaactcaaataagctaatccaaacaggccc 10640109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 161
Target Start/End: Original strand, 15246812 - 15246969
Alignment:
Q  4 ttaaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataagctg 102  Q
    ||||| ||| || ||||||||||| |||||||| |||||||||| || ||||| | ||||||||||| || ||| |  |||| ||  |||||||||| ||    
T  15246812 ttaaactattttcgtataagctatgagctgttttcataagctatcttagagaaatgataaaaataagttgcaaaaaacttatgaatgatgtcataagttg 15246911  T
Q  103 atttaaaaagtgttcccaaatagtcttaacaaagcttatgtcagtagataagctcaaat 161  Q
     ||| | ||||  ||||||| | || ||| ||| |||||||||||||||||||||||||    
T  15246912 ctttcataagttctcccaaacattc-taataaaacttatgtcagtagataagctcaaat 15246969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 14 - 80
Target Start/End: Original strand, 36318763 - 36318829
Alignment:
Q  14 tttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacag 80  Q
    |||||||||| | |||| ||||| |||||||||| |||||||||||||  |||||||||||||||||    
T  36318763 tttgtataagttttaagttgttttcataagctatcttggagaatttatgtaaataagctgaaaacag 36318829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 21 - 174
Target Start/End: Original strand, 41534437 - 41534587
Alignment:
Q  21 aagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagctgatttaaaaagtgttccca 120  Q
    |||||||||| ||||| |||||||||| || ||||| ||  | |||||| |||||||||| |||| ||   ||||||||||| ||| | ||||  |||||    
T  41534437 aagctataagttgttttcataagctatttttgagaacttgaagaaataatctgaaaacagcttatgaac--gtcataagctgttttcacaagttatccca 41534534  T
Q  121 aatagtcttaacaaagcttatgtcagtagataagctcaaatgagtcaatccaaa 174  Q
    || | ||| | ||||  |||||||||||||| ||||||||| ||||||||||||    
T  41534535 aacaatctca-caaaatttatgtcagtagattagctcaaataagtcaatccaaa 41534587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 1619082 - 1619166
Alignment:
Q  17 gtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagctg 102  Q
    |||||||||||||||||||| ||||||| || |||||||   ||| ||||| |||||||||||||||||  ||||| |||||||||    
T  1619082 gtataagctataagctgttttcataagccat-ttggagagcatatgaaaatcagctgaaaacagtttatgtaaatggcataagctg 1619166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 102
Target Start/End: Complemental strand, 23994797 - 23994708
Alignment:
Q  14 tttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagttta-taaaaatgtcataagctg 102  Q
    |||||||| |||||||||| ||| || ||||||| ||| |||| ||||||||||||| |||||| |||||| |||||| ||| |||||||    
T  23994797 tttgtatatgctataagctattttcacaagctatcttgtagaaattataaaaataagttgaaaaaagtttattaaaaacgtcgtaagctg 23994708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 99
Target Start/End: Complemental strand, 25461397 - 25461312
Alignment:
Q  14 tttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataag 99  Q
    |||| ||||||||||| |||||| ||||| |||| |||| | |||||| |||||||||||||||||| | || || ||||||||||    
T  25461397 tttgcataagctataaactgttttcataacctatcttggcgtatttatgaaaataagctgaaaacagctaatgaacatgtcataag 25461312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 181
Target Start/End: Original strand, 40426745 - 40426921
Alignment:
Q  5 taaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataagctga 103  Q
    |||||| | |||||||  ||| |||||||||||| |||||| | |||||||| |||  |||||||||| |||| || |||| ||||||| |||||||||     
T  40426745 taaattgtttttgtatttgctgtaagctgtttccgtaagctgtcttggagaacttacgaaaataagcttaaaaaagcttatgaaaaatggcataagctgt 40426844  T
Q  104 tttaaaaagtgttcccaaatagtcttaacaaagcttatgtcagtagataagctcaaatgagtcaatccaaaaaggccc 181  Q
    ||| | |||    |||||| |||| | |||||  |||||||| ||||||||||||||| |||||| | ||| ||||||    
T  40426845 tttcataagcacccccaaacagtc-tcacaaaatttatgtcattagataagctcaaataagtcaaccaaaacaggccc 40426921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 42582907 - 42582972
Alignment:
Q  20 taagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat 85  Q
    |||| ||||||||||||   ||||||||||||||||| |||| |||||||||| ||||||||||||    
T  42582907 taaggtataagctgtttttgtaagctatattggagaacttatgaaaataagctcaaaacagtttat 42582972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 105
Target Start/End: Original strand, 25461080 - 25461172
Alignment:
Q  14 tttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataagctgatt 105  Q
    |||||||| | |||||| ||||| |||||||| |||||||||| | || |||||||||||||||  |||||| |||| || ||||||||||||    
T  25461080 tttgtatatgttataagttgttttcataagctctattggagaactgatgaaaataagctgaaaaacgtttatgaaaattgccataagctgatt 25461172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 27 - 174
Target Start/End: Original strand, 39594809 - 39594956
Alignment:
Q  27 taagctgtttccataagctatattggagaatttataaaaataagctgaaaacagttta-taaaaatgtcataagctgatttaaaaagtgttcccaaatag 125  Q
    |||||||||| |||||| ||| |||  ||| |||| |||||||||||||||||  ||| ||| | | || | ||||| ||| | ||||  ||||||| |     
T  39594809 taagctgttttcataagatatcttgttgaacttatgaaaataagctgaaaacaacttaataacattatcttcagctgttttcataagttgtcccaaacaa 39594908  T
Q  126 tcttaacaaagcttatgtcagtagataagctcaaatgagtcaatccaaa 174  Q
    ||| |||||| |||||||| |||||||||||||||| ||||||||||||    
T  39594909 tct-aacaaaacttatgtcggtagataagctcaaataagtcaatccaaa 39594956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 80
Target Start/End: Original strand, 42569753 - 42569813
Alignment:
Q  20 taagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacag 80  Q
    ||||||||||||||| | |||||| ||  |||||||| |||||||||||||||||||||||    
T  42569753 taagctataagctgtcttcataaggtagcttggagaacttataaaaataagctgaaaacag 42569813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 174
Target Start/End: Original strand, 41419315 - 41419468
Alignment:
Q  20 taagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaa-aatgtcataagctgatttaaaaagtgttcc 118  Q
    ||||||||||| ||||| |||||||||| || |||| || || ||| ||| ||||||| || | || || |||||||||||||| ||| | ||||  |||    
T  41419315 taagctataagttgttttcataagctatttttgagacttaatgaaa-taatctgaaaatagctcatgaacaatgtcataagctgttttcacaagttatcc 41419413  T
Q  119 caaatagtcttaacaaagcttatgtcagtagataagctcaaatgagtcaatccaaa 174  Q
    |||| | ||| | ||||  |||||||||||||| ||||||||| ||||||||||||    
T  41419414 caaacaatctca-caaaatttatgtcagtagattagctcaaataagtcaatccaaa 41419468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 12494878 - 12494820
Alignment:
Q  16 tgtataagctataagctgtttccataagctatattggagaatttataaaaataagctga 74  Q
    ||||||||||||||||||||| |||| |||||  || |||| |||||||||||||||||    
T  12494878 tgtataagctataagctgttttcataggctatcgtgtagaacttataaaaataagctga 12494820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 174
Target Start/End: Complemental strand, 12857424 - 12857259
Alignment:
Q  9 ttatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataagctgattta 107  Q
    |||| |||||| | ||||| ||||| ||  |||||||||||||||||| ||| |||||||||||||||| || || | |||| ||||||||| || |||     
T  12857424 ttatttttgtacatgctattagctgattttataagctatattggagaacttacaaaaataagctgaaaaaagcttgtgaaaattgtcataagttgttttc 12857325  T
Q  108 aaaagtgttcccaaatagtcttaacaaagcttatgtcagtagataagctcaaatgagtcaatccaaa 174  Q
    | ||||  |||  || ||| || ||||| |||| |||| ||||||||||||||| |  |||||||||    
T  12857324 ataagttctccggaaaagt-ttcacaaaacttacgtcaatagataagctcaaataaaccaatccaaa 12857259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 77
Target Start/End: Original strand, 29925839 - 29925893
Alignment:
Q  23 gctataagctgtttccataagctatattggagaatttataaaaataagctgaaaa 77  Q
    |||||||| ||||| ||||||||||||||||||| |||| |||||||| ||||||    
T  29925839 gctataagttgtttacataagctatattggagaacttatgaaaataagttgaaaa 29925893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 39 - 183
Target Start/End: Complemental strand, 3932732 - 3932588
Alignment:
Q  39 ataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatg-tcataagctgatttaaaaagtgttcccaaatagtcttaacaaagc 137  Q
    |||||||| | ||||||| |||  ||||||||||| ||| || |||| |||||  |||||||||| |||   |||| ||| |||| ||||| | ||||||    
T  3932732 ataagctagactggagaacttacgaaaataagctgtaaaaagcttatgaaaattatcataagctgtttttgcaagttttctcaaacagtctca-caaagc 3932634  T
Q  138 ttatgtcagtagataagctcaaatgagtcaatccaaaaaggcccta 183  Q
    ||||||   ||||||||||||||| |||||||||||| || |||||    
T  3932633 ttatgttgttagataagctcaaattagtcaatccaaacagtcccta 3932588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 25 - 98
Target Start/End: Original strand, 11707055 - 11707128
Alignment:
Q  25 tataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataa 98  Q
    |||||||||||| |||||||||| ||| |||  || | |||||||||||||||||  ||||||| |||||||||    
T  11707055 tataagctgttttcataagctatcttgtagagcttttgaaaataagctgaaaacaacttataaacatgtcataa 11707128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 25 - 86
Target Start/End: Original strand, 32197720 - 32197781
Alignment:
Q  25 tataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttata 86  Q
    |||||||||||||||||||||||  || |||| |||| |||||||| ||||||||| |||||    
T  32197720 tataagctgtttccataagctatcctgaagaacttatgaaaataagatgaaaacagcttata 32197781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 14 - 79
Target Start/End: Original strand, 36326000 - 36326065
Alignment:
Q  14 tttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaaca 79  Q
    |||||||||| |||||| || || | |||||||| |||||||||||||  ||||||||||||||||    
T  36326000 tttgtataagttataagttgctttcgtaagctatcttggagaatttatgtaaataagctgaaaaca 36326065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 51 - 174
Target Start/End: Complemental strand, 499775 - 499652
Alignment:
Q  51 ggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagctgatttaaaaagtgttcccaaatagtcttaacaaa-gcttatgtcagtag 149  Q
    ||||| |||||  ||||||||||||||||  || | || ||||||||||||| ||| | ||||  ||||||| || || ||||   ||||||||||||||    
T  499775 ggagagtttatggaaataagctgaaaacaacttgttaacatgtcataagctgttttcataagttctcccaaacagcct-aacaggtgcttatgtcagtag 499677  T
Q  150 ataagctcaaatgagtcaatccaaa 174  Q
     ||||||||||| ||||||||||||    
T  499676 gtaagctcaaataagtcaatccaaa 499652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 182
Target Start/End: Complemental strand, 7706054 - 7705911
Alignment:
Q  39 ataagctatattggagaatttataaaaataagctgaaaacagtttataaaaa-tgtcataagctgatttaaaaagtgttcccaaatagtcttaacaaagc 137  Q
    |||||||||||||||||| || | ||||||||| ||||| ||    | |||| |||||||||||| ||| | ||||  ||||||| || | | ||||| |    
T  7706054 ataagctatattggagaacttgtgaaaataagccgaaaaaagcaggtgaaaactgtcataagctgttttcataagttctcccaaagag-cgtcacaaaac 7705956  T
Q  138 ttatgtcagtagataagctcaaatgagtcaatccaaaaaggccct 182  Q
    |||||  |||||||| |||||||| |||||||||||| |||||||    
T  7705955 ttatgctagtagatatgctcaaataagtcaatccaaacaggccct 7705911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 174
Target Start/End: Original strand, 14331400 - 14331515
Alignment:
Q  58 ttataaaaataagctgaaaacagtttataaaaatgtcataagctgatttaaaaagtgttcccaaatagtcttaacaaagcttatgtcagtagataagctc 157  Q
    |||| |||||||||||||| ||| ||||  | ||||||||||||| |||  || || || ||||| | ||| || |  ||||||| ||||||||||||||    
T  14331400 ttatgaaaataagctgaaatcagcttatggacatgtcataagctgttttgtaa-gtttttccaaacaatctcaagagtgcttatgacagtagataagctc 14331498  T
Q  158 aaatgagtcaatccaaa 174  Q
    |||| ||||||||||||    
T  14331499 aaataagtcaatccaaa 14331515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 85
Target Start/End: Original strand, 34160731 - 34160791
Alignment:
Q  25 tataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat 85  Q
    |||||||| ||| ||| || ||| |||||||| |||| |||||||||||||||||||||||    
T  34160731 tataagctattttcattagatatcttggagaacttatgaaaataagctgaaaacagtttat 34160791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 4620181 - 4620224
Alignment:
Q  13 atttgtataagctataagctgtttccataagctatattggagaa 56  Q
    ||||| |||||||||||||||||| |||||||||| ||||||||    
T  4620181 atttgcataagctataagctgttttcataagctatgttggagaa 4620224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 40 - 174
Target Start/End: Original strand, 9107105 - 9107239
Alignment:
Q  40 taagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataagctgatttaaaaagtgttcccaaatagtcttaacaaagct 138  Q
    |||| |||||||||||| |||| ||||| ||| ||||| ||||| | |||| |||| ||||||| ||| |  |||  ||||||| | || | ||||| ||    
T  9107105 taagttatattggagaacttatgaaaattagcagaaaaaagtttgtgaaaattgtcctaagctgttttcatgagttctcccaaacattc-tcacaaaact 9107203  T
Q  139 tatgtcagtagataagctcaaatgagtcaatccaaa 174  Q
    ||||||| ||||||| ||||||| ||||||||||||    
T  9107204 tatgtcactagataaactcaaataagtcaatccaaa 9107239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 26 - 101
Target Start/End: Complemental strand, 17258952 - 17258877
Alignment:
Q  26 ataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagct 101  Q
    ||||||||||| ||||| ||||  || |||  |||| |||||||||||||||||| |||| || ||||||||||||    
T  17258952 ataagctgttttcataaactatcctgaagagcttatgaaaataagctgaaaacagcttatgaacatgtcataagct 17258877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 79
Target Start/End: Complemental strand, 7319078 - 7319024
Alignment:
Q  25 tataagctgtttccataagctatattggagaatttataaaaataagctgaaaaca 79  Q
    ||||| |||||| |||||||||| |||||||| |||| |||||||||||| ||||    
T  7319078 tataaactgttttcataagctatcttggagaacttatgaaaataagctgagaaca 7319024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 77
Target Start/End: Complemental strand, 12857761 - 12857723
Alignment:
Q  39 ataagctatattggagaatttataaaaataagctgaaaa 77  Q
    |||||||||||||||||| |||| |||||||||||||||    
T  12857761 ataagctatattggagaacttatgaaaataagctgaaaa 12857723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 174
Target Start/End: Original strand, 14932362 - 14932445
Alignment:
Q  89 aatgtcataagctgatttaaaaagtgttcccaaatagtcttaacaaagcttatgtcagtagataagctcaaatgagtcaatccaaa 174  Q
    ||||||||||| || ||| | ||||  ||||||| | ||||||||| |  || |||||||||||||||||||| ||||||||||||    
T  14932362 aatgtcataagttgttttgacaagttctcccaaacaatcttaacaacg--taggtcagtagataagctcaaataagtcaatccaaa 14932445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 161
Target Start/End: Original strand, 15015949 - 15015979
Alignment:
Q  131 acaaagcttatgtcagtagataagctcaaat 161  Q
    |||||||||||||||||||||||||||||||    
T  15015949 acaaagcttatgtcagtagataagctcaaat 15015979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 28776985 - 28777051
Alignment:
Q  17 gtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagttt 83  Q
    ||||| |||||||||||||| |||||||||| |||||||| | || |||||||| | |||| |||||    
T  28776985 gtataggctataagctgttttcataagctatcttggagaactaatgaaaataagataaaaatagttt 28777051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 182
Target Start/End: Original strand, 35299880 - 35299922
Alignment:
Q  140 atgtcagtagataagctcaaatgagtcaatccaaaaaggccct 182  Q
    |||||| ||||||||||||||| |||||||||||| |||||||    
T  35299880 atgtcaatagataagctcaaataagtcaatccaaacaggccct 35299922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 182
Target Start/End: Complemental strand, 40439023 - 40438867
Alignment:
Q  25 tataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataagctgatttaaaaagtgttcccaaat 123  Q
    |||||||||||| ||| | |||| ||||||||  ||| |||||||  |||||| || |||| |||||||||| ||| || ||| ||| ||  |||||||     
T  40439023 tataagctgttttcatgacctatcttggagaacatatgaaaataaattgaaaa-agcttatgaaaaatgtcacaagttgttttcaaatgttctcccaaa- 40438926  T
Q  124 agtcttaacaaagcttatgtcagtagataagctcaaatgagtcaatccaaaaaggccct 182  Q
     ||||| ||||| |||||| |||||||| ||| ||||| || ||||||||| |||||||    
T  40438925 cgtctttacaaaacttatgccagtagatgagcccaaataagccaatccaaagaggccct 40438867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 102
Target Start/End: Complemental strand, 41957526 - 41957444
Alignment:
Q  20 taagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagctg 102  Q
    |||| |||||||||||| ||||||||||  | ||||| |||| |||||||| ||||||||  ||||  | |||||||||||||    
T  41957526 taagttataagctgttttcataagctatccttgagaacttatgaaaataagatgaaaacaacttatggacatgtcataagctg 41957444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 2568650 - 2568735
Alignment:
Q  17 gtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagctg 102  Q
    |||||||||||||| ||||| ||||||||||  ||||||  | || |||||||||| |||| |  |||| || |||||||||||||    
T  2568650 gtataagctataagttgttttcataagctatcatggagagctaatgaaaataagctaaaaataacttatgaatatgtcataagctg 2568735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 101
Target Start/End: Original strand, 5559704 - 5559801
Alignment:
Q  4 ttaaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagct 101  Q
    ||||||| | || |||||||||||||| ||||| ||| |||||| ||  |||  ||||||||| ||||||| ||| || || ||| ||||||||||||    
T  5559704 ttaaattgttttagtataagctataagttgttttcattagctatcttttagaggttataaaaacaagctgacaactgtctaaaaacatgtcataagct 5559801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 99
Target Start/End: Original strand, 12467166 - 12467207
Alignment:
Q  58 ttataaaaataagctgaaaacagtttataaaaatgtcataag 99  Q
    |||| |||||||||||||||||| ||||||| ||||||||||    
T  12467166 ttatgaaaataagctgaaaacagcttataaacatgtcataag 12467207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 21 - 102
Target Start/End: Complemental strand, 14674974 - 14674893
Alignment:
Q  21 aagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagctg 102  Q
    |||||||||| ||||  |||||| |||  || |||| |||| |||||| | | ||||||||||||||| |||||||||||||    
T  14674974 aagctataagttgttctcataagatatcctgtagaacttatgaaaatatgtttaaaacagtttataaacatgtcataagctg 14674893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 14 - 99
Target Start/End: Original strand, 17368665 - 17368750
Alignment:
Q  14 tttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataag 99  Q
    ||||| ||| ||||||| ||||| |||||||||| |||||||  ||||  ||||||||||||||| |  ||| || ||||||||||    
T  17368665 tttgtgtaatctataagttgttttcataagctatcttggagaggttatggaaataagctgaaaactgcatatgaacatgtcataag 17368750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 21 - 85
Target Start/End: Complemental strand, 29845509 - 29845444
Alignment:
Q  21 aagctataagctgtttc-cataagctatattggagaatttataaaaataagctgaaaacagtttat 85  Q
    ||||||||||||||||  | |||||||| |||||||| |||| || ||||||||||||||| ||||    
T  29845509 aagctataagctgtttttcgtaagctatcttggagaagttatgaatataagctgaaaacagcttat 29845444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 15 - 174
Target Start/End: Original strand, 32009682 - 32009842
Alignment:
Q  15 ttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacag-tttat-aaaaatgtcataagctgatttaaaaag 112  Q
    ||||||| |||||||  |||||  |||||||||||||||||| |||| |||| ||| | |||| || ||||| |||| ||||| |||||| ||| | |||    
T  32009682 ttgtatatgctataaattgtttttataagctatattggagaacttatgaaaacaagttcaaaaaagctttatgaaaattgtcacaagctgttttcataag 32009781  T
Q  113 tgttcccaaatagtcttaacaaagcttatgtcagtagataagctcaaatgagtcaatccaaa 174  Q
    | || |||||||||| | ||||| |||| ||||  |||||  |||||||  |||||||||||    
T  32009782 tttttccaaatagtc-tcacaaaacttaggtcaacagatagactcaaatatgtcaatccaaa 32009842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 99
Target Start/End: Complemental strand, 32194156 - 32194075
Alignment:
Q  18 tataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataag 99  Q
    ||||||||||||| |||||   |||||||| || ||||  ||||| ||||||||||||||||  ||||  ||||||||||||    
T  32194156 tataagctataagatgtttttttaagctatctttgagagcttatataaataagctgaaaacaacttatggaaatgtcataag 32194075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 26 - 95
Target Start/End: Original strand, 42583150 - 42583219
Alignment:
Q  26 ataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtca 95  Q
    ||||||||||| |||||  |||  ||||||| |||| ||  |||||||||||||||||||||| ||||||    
T  42583150 ataagctgttttcataatttatcgtggagaacttatgaatgtaagctgaaaacagtttataaacatgtca 42583219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 443924 - 443964
Alignment:
Q  14 tttgtataagctataagctgtttccataagctatattggag 54  Q
    ||||||||||||||||| ||||| |||||||||| ||||||    
T  443924 tttgtataagctataagatgttttcataagctatcttggag 443964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 102
Target Start/End: Original strand, 3977297 - 3977385
Alignment:
Q  14 tttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagctg 102  Q
    ||||||||| | ||||||||||| |||||| | |  ||||||| |||| ||||||||||||| |||| | |  || |||||||||||||    
T  3977297 tttgtataacccataagctgttttcataagttgttgtggagaaattatgaaaataagctgaagacagctaaggaacatgtcataagctg 3977385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 102
Target Start/End: Original strand, 6096546 - 6096625
Alignment:
Q  26 ataagctgtttccataagctatatt--ggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataagctg 102  Q
    |||||||||||||||||||||| ||  | ||||||||| ||||| |||||| ||||| |||| || ||||||| ||||||    
T  6096546 ataagctgtttccataagctatttttggcagaatttatgaaaatgagctgagaacagcttatgaacaatgtcacaagctg 6096625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 102
Target Start/End: Original strand, 14295499 - 14295583
Alignment:
Q  18 tataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagctg 102  Q
    ||||||||||||||||||| | ||||||||  ||||||  || || || |||||||||||||| ||||  | || ||||||||||    
T  14295499 tataagctataagctgttttcgtaagctatcctggagagcttttagaagtaagctgaaaacagcttatcgacatatcataagctg 14295583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 174
Target Start/End: Complemental strand, 14706241 - 14706205
Alignment:
Q  138 ttatgtcagtagataagctcaaatgagtcaatccaaa 174  Q
    |||||||||||| ||||||||||| ||||||||||||    
T  14706241 ttatgtcagtaggtaagctcaaataagtcaatccaaa 14706205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 174
Target Start/End: Original strand, 17369316 - 17369352
Alignment:
Q  138 ttatgtcagtagataagctcaaatgagtcaatccaaa 174  Q
    ||||||||||||||||| |||||| ||||||||||||    
T  17369316 ttatgtcagtagataagttcaaataagtcaatccaaa 17369352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 137 - 173
Target Start/End: Complemental strand, 22209782 - 22209746
Alignment:
Q  137 cttatgtcagtagataagctcaaatgagtcaatccaa 173  Q
    |||||| |||||||||||||||||| |||||||||||    
T  22209782 cttatgccagtagataagctcaaataagtcaatccaa 22209746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 77
Target Start/End: Original strand, 32372613 - 32372677
Alignment:
Q  14 tttgtataagctataagctgtttccataagctatattggagaatttat-aaaaataagctgaaaa 77  Q
    |||||||| |||||||||||||| || ||| ||| ||||||||  ||| ||||||||||||||||    
T  32372613 tttgtatatgctataagctgttttcacaagttatcttggagaacatataaaaaataagctgaaaa 32372677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 66
Target Start/End: Original strand, 32942611 - 32942659
Alignment:
Q  18 tataagctataagctgtttccataagctatattggagaatttataaaaa 66  Q
    |||| |||||||||||||| |||||||||| |||||||| |||| ||||    
T  32942611 tatatgctataagctgttttcataagctatcttggagaacttatgaaaa 32942659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 98
Target Start/End: Original strand, 41016566 - 41016650
Alignment:
Q  14 tttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataa 98  Q
    |||||||||||||||||| |||| |||||||||| || ||||| ||   |||| |||||||| | || ||||||| || ||||||    
T  41016566 tttgtataagctataagccgttttcataagctatcttagagaactttggaaaacaagctgaagagagcttataaacatatcataa 41016650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 39 - 71
Target Start/End: Complemental strand, 42569507 - 42569475
Alignment:
Q  39 ataagctatattggagaatttataaaaataagc 71  Q
    ||||||||||||||||||||||| |||||||||    
T  42569507 ataagctatattggagaatttatgaaaataagc 42569475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 60; Significance: 1e-25; HSPs: 60)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 18 - 180
Target Start/End: Complemental strand, 17822942 - 17822780
Alignment:
Q  18 tataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataagctgatttaaaaagtgtt 116  Q
    |||| |||||||| ||||| |||||||||| |||||||| |||| |||||||||| |||| || |||| ||||||||||||||||| ||| | | ||  |    
T  17822942 tatatgctataagttgttttcataagctatcttggagaacttatgaaaataagctaaaaaaagcttatgaaaaatgtcataagctgttttcatatgttct 17822843  T
Q  117 cccaaatagtcttaacaaagcttatgtcagtagataagctcaaatgagtcaatccaaaaaggcc 180  Q
    || ||||||||| | || | ||||||||||||||||||||||||| ||| |||||||| |||||    
T  17822842 cctaaatagtctca-cagaacttatgtcagtagataagctcaaataagttaatccaaacaggcc 17822780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 14 - 181
Target Start/End: Complemental strand, 21731737 - 21731570
Alignment:
Q  14 tttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataagctgatttaaaaag 112  Q
    |||||||  |||||||| |||||  ||||||||||||||||||||||| ||| |||| |||||| ||||||| |||| ||| |||||||| ||| | |||    
T  21731737 tttgtatgtgctataagttgtttttataagctatattggagaatttatgaaagtaagttgaaaaaagtttatgaaaattgtgataagctgttttcataag 21731638  T
Q  113 tgttcccaaatagtcttaacaaagcttatgtcagtagataagctcaaatgagtcaatccaaaaaggccc 181  Q
    |  ||||||| | || | ||||| |||||||||||||||| |||||||| |  ||||||||| ||||||    
T  21731637 ttctcccaaacaatc-tcacaaaacttatgtcagtagatatgctcaaataaaccaatccaaacaggccc 21731570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 39 - 179
Target Start/End: Original strand, 29388628 - 29388768
Alignment:
Q  39 ataagctatattggagaatttataaaaataagctgaaaacagtttataaaaa-tgtcataagctgatttaaaaagtgttcccaaatagtcttaacaaagc 137  Q
    |||||||||| |||||||||||| |||||||| |||||| ||  |||||||| |||||||| ||| |||   ||||  ||||||| | |||| ||||| |    
T  29388628 ataagctatactggagaatttatgaaaataagttgaaaagagcatataaaaattgtcataaactgctttcgtaagttctcccaaacaatctt-acaaaac 29388726  T
Q  138 ttatgtcagtagataagctcaaatgagtcaatccaaaaaggc 179  Q
    |||||| |||||||||| |||||| |||||| ||||| ||||    
T  29388727 ttatgttagtagataaggtcaaataagtcaacccaaacaggc 29388768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 79
Target Start/End: Original strand, 51630104 - 51630165
Alignment:
Q  18 tataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaaca 79  Q
    ||||||||||||||| ||| |||||||||| ||| ||||||||| |||||||||||||||||    
T  51630104 tataagctataagctattttcataagctatcttgaagaatttatgaaaataagctgaaaaca 51630165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 4 - 180
Target Start/End: Complemental strand, 53294205 - 53294029
Alignment:
Q  4 ttaaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatg-tcataagctg 102  Q
    ||||||| | |||||||| |||||||| |||||  |||| ||||||| ||||| |||| |||| |||||||||| || || | ||||   ||||||  ||    
T  53294205 ttaaattgtttttgtatatgctataagttgtttttataaactatattagagaacttatgaaaacaagctgaaaatagcttttgaaaaccatcataatttg 53294106  T
Q  103 atttaaaaagtgttcccaaatagtcttaacaaagcttatgtcagtagataagctcaaatgagtcaatccaaaaaggcc 180  Q
     ||| |  ||| |||||||| ||||||| |||| || |||||||||||||||| ||||| |||||||||||| |||||    
T  53294105 ttttcatgagttttcccaaacagtctta-caaaactcatgtcagtagataagcacaaattagtcaatccaaacaggcc 53294029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 39 - 174
Target Start/End: Original strand, 2244065 - 2244200
Alignment:
Q  39 ataagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataagctgatttaaaaagtgttcccaaatagtcttaacaaagc 137  Q
    |||||||||||||||||| |||| |||||||| |||||| ||||||| || | |||||||||||| ||| |||| |  ||||||| ||| || | ||| |    
T  2244065 ataagctatattggagaacttatgaaaataaggtgaaaaaagtttatgaatattgtcataagctgtttttaaaaattctcccaaacagt-ttcaaaaaac 2244163  T
Q  138 ttatgtcagtagataagctcaaatgagtcaatccaaa 174  Q
    |||||||||||||||| |||  || | ||||||||||    
T  2244164 ttatgtcagtagataaactcggataaatcaatccaaa 2244200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 39 - 181
Target Start/End: Complemental strand, 25904279 - 25904137
Alignment:
Q  39 ataagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataagctgatttaaaaagtgttcccaaatagtcttaacaaagc 137  Q
    ||||||| | |||||||| |||||||||||||||||||| || |||| ||||||| ||||||||| ||| | |||   ||||||| |||| | |||||      
T  25904279 ataagctgttttggagaacttataaaaataagctgaaaaaagcttatgaaaaatggcataagctgttttcataagctctcccaaacagtc-tcacaaaat 25904181  T
Q  138 ttatgtcagtagataagctcaaatgagtcaatccaaaaaggccc 181  Q
    |||||||| | ||||||||||||| |||||| | ||| ||||||    
T  25904180 ttatgtcattggataagctcaaataagtcaaccaaaacaggccc 25904137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 25 - 179
Target Start/End: Original strand, 54426043 - 54426197
Alignment:
Q  25 tataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataagctgatttaaaaagtgttcccaaat 123  Q
    |||||| |||||  |||| ||||||||||||| |||| |||||||  |||||| || |||| |||| |||||||||||| |||   ||||  ||||||      
T  54426043 tataagttgtttttataatctatattggagaacttatgaaaataacttgaaaaaagcttatgaaaattgtcataagctgttttcctaagttctcccaagc 54426142  T
Q  124 agtcttaacaaagcttatgtcagtagataagctcaaatgagtcaatccaaaaaggc 179  Q
    |||| | ||||| |||||| |||||||||||||||||| || ||||||||| ||||    
T  54426143 agtc-tcacaaaacttatgccagtagataagctcaaataagccaatccaaacaggc 54426197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 102
Target Start/End: Original strand, 55302228 - 55302327
Alignment:
Q  4 ttaaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagttta-taaaaatgtcataagctg 102  Q
    ||||||||| ||||||||  ||||||||||||  |||||||||| ||||| || |||| ||||||||||||||| || |||  |||| ||||||||||||    
T  55302228 ttaaattatctttgtatatactataagctgttatcataagctatgttggaaaacttatgaaaataagctgaaaaaagcttacgaaaattgtcataagctg 55302327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 7694091 - 7694009
Alignment:
Q  14 tttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcat 96  Q
    ||||||||||||||||||||||| |||||| |||  |||||| |||||  ||||||||||||||||  |||| || |||||||    
T  7694091 tttgtataagctataagctgttttcataagttatcctggagagtttatggaaataagctgaaaacaacttatgaacatgtcat 7694009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 25 - 174
Target Start/End: Complemental strand, 52315267 - 52315118
Alignment:
Q  25 tataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataagctgatttaaaaagtgttcccaaat 123  Q
    |||||| |||||||||||||||| ||||| || |||| |||||||||||||| ||  |||| || ||||| ||||| || ||| | ||||  | |||||     
T  52315267 tataagttgtttccataagctattttggaaaacttatgaaaataagctgaaagcaacttatgaataatgtgataagttgttttgataagttcttccaaac 52315168  T
Q  124 agtcttaacaaagcttatgtcagtagataagctcaaatgagtcaatccaaa 174  Q
    | || | ||||| |||| |||||||||||| ||||||| ||||||||||||    
T  52315167 aatc-tcacaaaacttacgtcagtagataaactcaaataagtcaatccaaa 52315118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 174
Target Start/End: Original strand, 24169256 - 24169412
Alignment:
Q  18 tataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataagctgatttaaaaagtgtt 116  Q
    |||| |||||||  ||||| || ||||||| |||||||  |||| |||||||| |||||| |  |||| ||||||||||||||||  ||| ||||||  |    
T  24169256 tataggctataaaatgttttcacaagctatcttggagagcttatgaaaataagttgaaaaaatcttatgaaaaatgtcataagctatttttaaaagttct 24169355  T
Q  117 cccaaatagtcttaacaaagcttatgtcagtagataagctcaaatgagtcaatccaaa 174  Q
    | ||||||||| | ||||| |||||| |||||||||| ||| ||| || |||||||||    
T  24169356 ctcaaatagtc-tcacaaaacttatgccagtagataaactctaataagccaatccaaa 24169412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 102
Target Start/End: Original strand, 1407935 - 1408035
Alignment:
Q  4 ttaaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctg-aaaacagtttat-aaaaatgtcataagct 101  Q
    ||||||| | ||||| ||||||  ||||||||| |||||||||| | ||| ||||||| || |||||||| ||||||| |||| ||||||||||||||||    
T  1407935 ttaaattgtttttgtgtaagctgcaagctgttttcataagctatctaggaaaatttatgaagataagctgaaaaacagcttatgaaaaatgtcataagct 1408034  T
Q  102 g 102  Q
    |    
T  1408035 g 1408035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 84
Target Start/End: Original strand, 3155582 - 3155662
Alignment:
Q  4 ttaaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagttta 84  Q
    ||||||| | |||||| |||||| ||||||||| ||||| |||| ||| |||| | || ||||||||||||||||||||||    
T  3155582 ttaaattgtttttgtacaagctacaagctgttttcataaactatcttgaagaactaatgaaaataagctgaaaacagttta 3155662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 21 - 85
Target Start/End: Original strand, 40174559 - 40174623
Alignment:
Q  21 aagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat 85  Q
    |||||||||||||||| ||||||||| ||||||||| || | | |||||| ||||||||||||||    
T  40174559 aagctataagctgttttcataagctacattggagaacttgtgataataagttgaaaacagtttat 40174623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 50 - 161
Target Start/End: Complemental strand, 49939996 - 49939885
Alignment:
Q  50 tggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataagctgatttaaaaagtgttcccaaatagtcttaacaaagcttatgtcagta 148  Q
    ||||| |||||||| |||||||||||||||| |||| || |||||||||||||  ||| | ||||  | |||||||||| | ||||||||||||  ||||    
T  49939996 tggagcatttataataataagctgaaaacagcttatgaacaatgtcataagctcttttcataagttcttccaaatagtc-tcacaaagcttatgctagta 49939898  T
Q  149 gataagctcaaat 161  Q
    |||||||| ||||    
T  49939897 gataagcttaaat 49939885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 84
Target Start/End: Complemental strand, 1203194 - 1203127
Alignment:
Q  17 gtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagttta 84  Q
    |||||||||||||| ||| | |||||| ||| |||||||| |||| |||||||||| |||||||||||    
T  1203194 gtataagctataagttgtcttcataagttatcttggagaacttattaaaataagctaaaaacagttta 1203127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 77
Target Start/End: Complemental strand, 16200062 - 16199999
Alignment:
Q  14 tttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaa 77  Q
    |||||||| |||||||||||||| |||||||||| |||||| | |||| |||||||||| ||||    
T  16200062 tttgtatatgctataagctgttttcataagctatcttggaggacttatgaaaataagctaaaaa 16199999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 79
Target Start/End: Original strand, 17884047 - 17884122
Alignment:
Q  4 ttaaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaaca 79  Q
    ||||||| | |||||||||| ||| || ||||| ||||||||||||||||||  |||| ||||| |||||||||||    
T  17884047 ttaaattgtttttgtataagttatcagttgttttcataagctatattggagagcttatgaaaattagctgaaaaca 17884122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 174
Target Start/End: Complemental strand, 27043794 - 27043751
Alignment:
Q  131 acaaagcttatgtcagtagataagctcaaatgagtcaatccaaa 174  Q
    ||||| ||||||||||||||||||||||||| ||||||||||||    
T  27043794 acaaaacttatgtcagtagataagctcaaataagtcaatccaaa 27043751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 93
Target Start/End: Original strand, 35064844 - 35064923
Alignment:
Q  14 tttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgt 93  Q
    |||||||| |||||| ||||||| |||||| |||  |||||| |||||  |||||||||||||||| |||||||| ||||    
T  35064844 tttgtataggctatatgctgttttcataagatatcatggagagtttatggaaataagctgaaaacaatttataaacatgt 35064923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 183
Target Start/End: Complemental strand, 35571709 - 35571543
Alignment:
Q  17 gtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataagctgatttaaaaagtgt 115  Q
    |||||||||||||||||||| |||||||||| || ||||| || | |||||||| ||||| ||| | || || | ||| |||||||| ||| ||||||      
T  35571709 gtataagctataagctgttttcataagctatcttagagaacttgtgaaaataagttgaaaccagctcatgaacagtgtaataagctgtttttaaaagttc 35571610  T
Q  116 tcccaaatagtcttaacaaagcttatgtcagtagataagctcaaatgagtcaatccaaaaaggcccta 183  Q
    |||||||   ||   ||||| ||||||  ||||||||||||||||| || ||||||||| || |||||    
T  35571609 tcccaaactatc-ccacaaaacttatgctagtagataagctcaaataagccaatccaaacagacccta 35571543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 182
Target Start/End: Complemental strand, 42403987 - 42403936
Alignment:
Q  131 acaaagcttatgtcagtagataagctcaaatgagtcaatccaaaaaggccct 182  Q
    ||||| ||||||||||| ||||||||||||| |||||||||||| |||||||    
T  42403987 acaaaacttatgtcagttgataagctcaaataagtcaatccaaacaggccct 42403936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 91
Target Start/End: Complemental strand, 50681180 - 50681093
Alignment:
Q  4 ttaaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaat 91  Q
    ||||||| | |||||||| |||||||| |||||  |||||||||||||||||| |||| |||||||  |||||| || |||| |||||    
T  50681180 ttaaattgtttttgtatatgctataagttgtttatataagctatattggagaaattatgaaaataaattgaaaaaagcttatgaaaat 50681093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 180
Target Start/End: Complemental strand, 26920 - 26780
Alignment:
Q  39 ataagctatattggagaatttataaaaataagctgaaaacagtttataaaaat-gtcataagctgatttaaaaagtgttcccaaatagtcttaacaaagc 137  Q
    |||||||||||||||||| |||| ||||||| ||||||| || || | ||| | ||||||||||| ||| | || |  ||  ||| ||||| ||||||||    
T  26920 ataagctatattggagaacttatgaaaataatctgaaaa-agcttgtgaaatttgtcataagctgttttcataatttctcggaaacagtct-aacaaagc 26823  T
Q  138 ttatgtcagtagataagctcaaatgagtcaatccaaaaaggcc 180  Q
    ||||| |||| ||||||||||||| || ||||||||| |||||    
T  26822 ttatgccagttgataagctcaaataagccaatccaaacaggcc 26780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 99
Target Start/End: Complemental strand, 825552 - 825486
Alignment:
Q  33 gtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataag 99  Q
    |||| |||||||||| |||||||| |||| |||||||||||||||||||| || |  ||||||||||    
T  825552 gttttcataagctattttggagaacttatgaaaataagctgaaaacagttaatgagcatgtcataag 825486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 85
Target Start/End: Original strand, 6364143 - 6364209
Alignment:
Q  19 ataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat 85  Q
    |||||||||||||  ||| ||||||||||| ||||||| |||  |||||||||||||||||| ||||    
T  6364143 ataagctataagcaattttcataagctataatggagaacttacgaaaataagctgaaaacagcttat 6364209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 174
Target Start/End: Complemental strand, 13126630 - 13126497
Alignment:
Q  41 aagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataagctgatttaaaaagtgttcccaaatagtcttaacaaagctt 139  Q
    ||||||| || ||||| |||| ||||||||||||||| || |||| | ||||||||||||||| ||| | ||||  | ||||| |||| | ||||| |||    
T  13126630 aagctatcttcgagaacttatgaaaataagctgaaaaaagcttatgataaatgtcataagctgtttttataagttcttccaaacagtc-tcacaaaactt 13126532  T
Q  140 atgtcagtagataagctcaaatgagtcaatccaaa 174  Q
    |||| ||||| |||||| |||| || |||||||||    
T  13126531 atgttagtaggtaagctaaaataagccaatccaaa 13126497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 136 - 174
Target Start/End: Complemental strand, 32831477 - 32831439
Alignment:
Q  136 gcttatgtcagtagataagctcaaatgagtcaatccaaa 174  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  32831477 gcttatgtcagtagataagctcaaatgagccaatccaaa 32831439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 102
Target Start/End: Original strand, 38515849 - 38515908
Alignment:
Q  41 aagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagctg 102  Q
    ||||||| ||||| |||||||||||||||||||||||||| ||||   ||||||||||||||    
T  38515849 aagctattttggaaaatttataaaaataagctgaaaacagcttat--gaatgtcataagctg 38515908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 40 - 97
Target Start/End: Complemental strand, 10205965 - 10205908
Alignment:
Q  40 taagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcata 97  Q
    ||||||||  ||||||||| | |||||||||||||||||||||||| || ||||||||    
T  10205965 taagctatcctggagaattaacaaaaataagctgaaaacagtttatgaacatgtcata 10205908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 102
Target Start/End: Complemental strand, 30066844 - 30066759
Alignment:
Q  17 gtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagctg 102  Q
    |||||| || |||||||||  |||||||||| |||||||  ||||||||| ||||||||||||| |||| || || | ||||||||    
T  30066844 gtataaactgtaagctgttctcataagctatcttggagagcttataaaaacaagctgaaaacagattatgaacatattataagctg 30066759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 127
Target Start/End: Original strand, 45214365 - 45214473
Alignment:
Q  19 ataagctataagctgtttccataagctatattggagaattta-taaaaataagctgaaaacagtttataaaaatgtcataagctgatttaaaaagtgttc 117  Q
    ||||||||||||||||||| |||| |||| |||||||| ||| ||||||||||||||||| || || | ||  ||||||||| |||||| | ||||  ||    
T  45214365 ataagctataagctgtttc-ataaactatcttggagaacttaataaaaataagctgaaaatagattgtgaacgtgtcataagttgatttcataagttctc 45214463  T
Q  118 ccaaatagtc 127  Q
     |||||||||    
T  45214464 tcaaatagtc 45214473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 99
Target Start/End: Complemental strand, 50800106 - 50800026
Alignment:
Q  18 tataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataag 99  Q
    ||||||||||||||||||| | ||||||||  ||||||| || |  ||||||||||||||||| ||||| | ||||||||||    
T  50800106 tataagctataagctgttttcttaagctatcatggagaactt-tggaaataagctgaaaacagcttatagacatgtcataag 50800026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 14 - 102
Target Start/End: Complemental strand, 55414501 - 55414412
Alignment:
Q  14 tttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataagctg 102  Q
    |||| ||| |||||||  ||||| |||||| ||| |||||||| |||| |||||||| |||||| || |||| |||||||||||||||||    
T  55414501 tttgcatatgctataaattgttttcataagttatcttggagaacttatgaaaataagttgaaaaaagcttatgaaaaatgtcataagctg 55414412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 84
Target Start/End: Original strand, 679244 - 679311
Alignment:
Q  14 tttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagttta 84  Q
    ||||||||||||||||||||||| |||||| ||| ||   ||| |||| |||||||||| |||||||||||    
T  679244 tttgtataagctataagctgttttcataagttatctt---gaacttatgaaaataagctcaaaacagttta 679311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 68
Target Start/End: Original strand, 23503538 - 23503602
Alignment:
Q  4 ttaaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaata 68  Q
    ||||||||| |||||| |||  |||||||||||||||||||||| || || || |||||||||||    
T  23503538 ttaaattatttttgtagaagacataagctgtttccataagctatctttgaaaacttataaaaata 23503602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 91
Target Start/End: Complemental strand, 50662818 - 50662742
Alignment:
Q  15 ttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaat 91  Q
    ||||||| |||||||| |||||  |||||||||||||||||| || | |||||||| |||||| || |||| |||||    
T  50662818 ttgtatatgctataagttgtttatataagctatattggagaaattgtgaaaataagttgaaaaaagcttatgaaaat 50662742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 131 - 174
Target Start/End: Original strand, 8705047 - 8705090
Alignment:
Q  131 acaaagcttatgtcagtagataagctcaaatgagtcaatccaaa 174  Q
    ||||| ||||||||| |||||||||||||||||| |||||||||    
T  8705047 acaaaacttatgtcaatagataagctcaaatgagccaatccaaa 8705090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 131 - 174
Target Start/End: Complemental strand, 15173267 - 15173224
Alignment:
Q  131 acaaagcttatgtcagtagataagctcaaatgagtcaatccaaa 174  Q
    ||||| |||||||||||||||||| |||||| ||||||||||||    
T  15173267 acaaaacttatgtcagtagataagttcaaataagtcaatccaaa 15173224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 14 - 77
Target Start/End: Complemental strand, 19395197 - 19395134
Alignment:
Q  14 tttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaa 77  Q
    ||||||||||||||||  ||||| ||| |||||| |||||||||| ||  ||||||||||||||    
T  19395197 tttgtataagctataaaatgttttcattagctatcttggagaattgattgaaataagctgaaaa 19395134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 85
Target Start/End: Complemental strand, 28749984 - 28749917
Alignment:
Q  18 tataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat 85  Q
    |||||||||||| |||| |  ||||||||| ||||| ||||||| ||||| || ||||||||||||||    
T  28749984 tataagctataaactgtatgtataagctatcttggataatttatgaaaatgagttgaaaacagtttat 28749917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 16 - 99
Target Start/End: Original strand, 42121479 - 42121561
Alignment:
Q  16 tgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataag 99  Q
    ||||||||||||||| ||||| ||| |||||| |||||||| || |  |||||||||| |||||| |||| || ||||||||||    
T  42121479 tgtataagctataagttgttttcatgagctatcttggagaacttgtggaaataagctg-aaacagcttatgaacatgtcataag 42121561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 131 - 182
Target Start/End: Original strand, 44797986 - 44798037
Alignment:
Q  131 acaaagcttatgtcagtagataagctcaaatgagtcaatccaaaaaggccct 182  Q
    ||||| |||||||||||||||||||| |||| || ||||||||| |||||||    
T  44797986 acaaaacttatgtcagtagataagcttaaatcagccaatccaaacaggccct 44798037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 25 - 88
Target Start/End: Original strand, 47800623 - 47800686
Alignment:
Q  25 tataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaa 88  Q
    |||||||||||| |||||||||| ||| |||  |||| |||||||||||||||| | |||||||    
T  47800623 tataagctgttttcataagctatcttgaagagcttatgaaaataagctgaaaaccgcttataaa 47800686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 74
Target Start/End: Complemental strand, 437335 - 437265
Alignment:
Q  4 ttaaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctga 74  Q
    ||||||||| |||| ||  | ||| ||||||||  |||| |||||||||||||||||| ||||||||||||    
T  437335 ttaaattatttttgcatgtgttatgagctgtttttataaactatattggagaatttatgaaaataagctga 437265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 183
Target Start/End: Original strand, 25571371 - 25571417
Alignment:
Q  137 cttatgtcagtagataagctcaaatgagtcaatccaaaaaggcccta 183  Q
    ||||||||||||||||| ||||||| || ||||||||| ||||||||    
T  25571371 cttatgtcagtagataaactcaaataagccaatccaaacaggcccta 25571417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 32421098 - 32421148
Alignment:
Q  18 tataagctataagctgtttccataagctatattggagaatttataaaaata 68  Q
    |||||||||||||| ||||||||||||||| ||| |||| |||| ||||||    
T  32421098 tataagctataagcagtttccataagctattttgaagaacttatgaaaata 32421148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 102
Target Start/End: Complemental strand, 52746931 - 52746833
Alignment:
Q  4 ttaaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagctg 102  Q
    ||||||| | ||||| ||||| ||||||||||| |||||||||| ||| |    |||| ||||| |||||||||||| |||| || ||||| |||||||    
T  52746931 ttaaattgtttttgtgtaagccataagctgttttcataagctatcttgtaaggcttatgaaaatcagctgaaaacagcttatgaacatgtcttaagctg 52746833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 27 - 72
Target Start/End: Complemental strand, 942176 - 942131
Alignment:
Q  27 taagctgtttccataagctatattggagaatttataaaaataagct 72  Q
    |||||||||| ||||||||||  ||||||| |||||||||||||||    
T  942176 taagctgttttcataagctattatggagaacttataaaaataagct 942131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 79
Target Start/End: Complemental strand, 16494882 - 16494821
Alignment:
Q  18 tataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaaca 79  Q
    ||||||||||||| ||||| |||||||||| |||||||  || ||||| |||| ||||||||    
T  16494882 tataagctataagttgttttcataagctatcttggagagcttgtaaaactaagttgaaaaca 16494821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 20 - 77
Target Start/End: Original strand, 20031744 - 20031801
Alignment:
Q  20 taagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaa 77  Q
    |||||||||||| |||| |||||||||| || ||||| |||| ||||| |||||||||    
T  20031744 taagctataagcagttttcataagctattttagagaacttatgaaaatgagctgaaaa 20031801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 136 - 181
Target Start/End: Complemental strand, 22662210 - 22662165
Alignment:
Q  136 gcttatgtcagtagataagctcaaatgagtcaatccaaaaaggccc 181  Q
    |||||||| ||||||||| ||||||| |||||||||||| ||||||    
T  22662210 gcttatgttagtagataaactcaaataagtcaatccaaacaggccc 22662165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 136 - 181
Target Start/End: Complemental strand, 22666689 - 22666644
Alignment:
Q  136 gcttatgtcagtagataagctcaaatgagtcaatccaaaaaggccc 181  Q
    |||||||| ||||||||| ||||||| |||||||||||| ||||||    
T  22666689 gcttatgttagtagataaactcaaataagtcaatccaaacaggccc 22666644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 21 - 82
Target Start/End: Complemental strand, 29601082 - 29601021
Alignment:
Q  21 aagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtt 82  Q
    ||||||||| |||||| |||| |||||  | ||||| |||| ||||||||||||||||||||    
T  29601082 aagctataatctgttttcatatgctatcctagagaacttatgaaaataagctgaaaacagtt 29601021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 174
Target Start/End: Original strand, 23459621 - 23459776
Alignment:
Q  18 tataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagctgatttaaaaagtgttc 117  Q
    ||||||||||||||||||| ||||||  || ||| | || |||| || ||||| |||||| |  |||| || ||||||||||||  ||| | ||||  ||    
T  23459621 tataagctataagctgttttcataagagatcttgaaaaacttatgaatataagttgaaaataacttattaacatgtcataagcttttttcataagttctc 23459720  T
Q  118 ccaaatagtcttaacaaagcttatgtcagtagataagctcaaatgagtcaatccaaa 174  Q
    | ||| ||||||| || | ||||||  |||||||||||||||||  | |||||||||    
T  23459721 cgaaacagtcttaccata-cttatgctagtagataagctcaaatatgccaatccaaa 23459776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 77
Target Start/End: Original strand, 29912956 - 29913000
Alignment:
Q  33 gtttccataagctatattggagaatttataaaaataagctgaaaa 77  Q
    |||| |||||||||| ||||| || ||||||||||||||||||||    
T  29912956 gttttcataagctatcttggacaacttataaaaataagctgaaaa 29913000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 102
Target Start/End: Complemental strand, 30207648 - 30207564
Alignment:
Q  18 tataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagctg 102  Q
    ||||||||||||| ||||| |||||||||  || ||||  ||||  ||||||||||||||||| ||| | | |||||||| ||||    
T  30207648 tataagctataagttgttttcataagctaccttagagagattatggaaataagctgaaaacagcttacagacatgtcatatgctg 30207564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 49940069 - 49940025
Alignment:
Q  17 gtataagctataagctgtttccataagctatattggagaatttat 61  Q
    ||||||||||| |||||||| |||||||||| |||||| ||||||    
T  49940069 gtataagctattagctgttttcataagctatcttggagcatttat 49940025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 81
Target Start/End: Complemental strand, 50004210 - 50004158
Alignment:
Q  29 agctgtttccataagctatattggagaatttataaaaataagctgaaaacagt 81  Q
    |||||||| | |||| ||| |||||||| |||| |||||||||||||||||||    
T  50004210 agctgttttcctaagttatcttggagaacttatgaaaataagctgaaaacagt 50004158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 58; Significance: 2e-24; HSPs: 69)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 25 - 174
Target Start/End: Original strand, 6292493 - 6292641
Alignment:
Q  25 tataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagctgatttaaaaagtgttcccaaata 124  Q
    |||||||| ||| | ||| |||| |||||||  |||| |||||||||||||||||| |||| || ||||||||||||| |||||||| | | |||||| |    
T  6292493 tataagctattttcgtaaactattttggagagcttatgaaaataagctgaaaacagcttatgaacatgtcataagctgttttaaaaattct-cccaaaca 6292591  T
Q  125 gtcttaacaaagcttatgtcagtagataagctcaaatgagtcaatccaaa 174  Q
     ||| || |  |||||||||||||||||||||||||| ||||||||||||    
T  6292592 atctcaaaagtgcttatgtcagtagataagctcaaataagtcaatccaaa 6292641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 14 - 126
Target Start/End: Original strand, 34290225 - 34290337
Alignment:
Q  14 tttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagctgatttaaaaagt 113  Q
    ||||||||||||||||||||||| |||||||||| ||| |||| |||| |||||||||||||||||  |||| || ||||||||||||  ||||| || |    
T  34290225 tttgtataagctataagctgttttcataagctatcttgaagaacttatgaaaataagctgaaaacaacttatgaatatgtcataagcttttttaataaat 34290324  T
Q  114 gttcccaaatagt 126  Q
      |||||||||||    
T  34290325 tctcccaaatagt 34290337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 4 - 83
Target Start/End: Original strand, 7472290 - 7472369
Alignment:
Q  4 ttaaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagttt 83  Q
    ||||||| | ||||||||| |||||||||||||||||||||||| |||||||  |||| |||||||||||||||||||||    
T  7472290 ttaaattgtttttgtataatctataagctgtttccataagctatcttggagagcttatgaaaataagctgaaaacagttt 7472369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 14 - 85
Target Start/End: Original strand, 45975679 - 45975750
Alignment:
Q  14 tttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat 85  Q
    ||||||||||||| ||||||||| |||||||||| ||||||||||||| |||||||||||||||||| ||||    
T  45975679 tttgtataagctacaagctgttttcataagctatcttggagaatttatgaaaataagctgaaaacagcttat 45975750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 99
Target Start/End: Original strand, 10809324 - 10809419
Alignment:
Q  4 ttaaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataag 99  Q
    ||||| ||| ||||| ||||||||||| ||||  ||| ||||||||||||||| |||| |||||||||||||||||  ||||||| ||||||||||    
T  10809324 ttaaagtatttttgtgtaagctataagttgttctcatcagctatattggagaacttatgaaaataagctgaaaacatattataaacatgtcataag 10809419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 14 - 100
Target Start/End: Complemental strand, 7137079 - 7136993
Alignment:
Q  14 tttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagc 100  Q
    ||||||||| ||||||||||||| |||||||||| |||||||| |||| ||||||||||||||| |  |||| || |||||||||||    
T  7137079 tttgtataatctataagctgttttcataagctatcttggagaacttatgaaaataagctgaaaataacttatgaatatgtcataagc 7136993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 17 - 182
Target Start/End: Complemental strand, 10199486 - 10199321
Alignment:
Q  17 gtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagctgatttaaaaagtgtt 116  Q
    |||||| | ||||||| ||| |||||||||| || ||||  |||| |||||||||||||||||  |||| || ||||||||||||  ||| |  |||  |    
T  10199486 gtataatcgataagcttttttcataagctattttagagagcttatgaaaataagctgaaaacaacttatgaacatgtcataagctattttcatgagttct 10199387  T
Q  117 cccaaatagtcttaacaaagcttatgtcagtagataagctcaaatgagtcaatccaaaaaggccct 182  Q
    |||||||||| | |  |  |||||||| ||||||||||||||||| |||||||||||  |||||||    
T  10199386 cccaaatagtgtcacaagtgcttatgttagtagataagctcaaataagtcaatccaaccaggccct 10199321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 14 - 98
Target Start/End: Original strand, 10799451 - 10799535
Alignment:
Q  14 tttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataa 98  Q
    ||||| ||||||||||| ||||  ||| ||||| ||||||||| |||| |||||||||||||||||| ||||||| |||||||||    
T  10799451 tttgtgtaagctataagttgttctcatcagctacattggagaacttatgaaaataagctgaaaacagattataaacatgtcataa 10799535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 98
Target Start/End: Original strand, 4576784 - 4576878
Alignment:
Q  4 ttaaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataa 98  Q
    ||||| ||| |||||| ||| |||||||||||| |||||||||||||| | || |||| ||||||||||||| |||  ||||||| |||||||||    
T  4576784 ttaaaatatttttgtacaagttataagctgttttcataagctatattgaataacttatgaaaataagctgaacacaacttataaacatgtcataa 4576878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 101
Target Start/End: Complemental strand, 27820416 - 27820330
Alignment:
Q  16 tgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataagct 101  Q
    ||||||||||||| |||||||  ||||||||| ||||||||||||| ||||||||||||||| || |||| || |||||| ||||||    
T  27820416 tgtataagctatatgctgtttttataagctatcttggagaatttatgaaaataagctgaaaatagcttatgaacaatgtcgtaagct 27820330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 96
Target Start/End: Complemental strand, 37842431 - 37842354
Alignment:
Q  19 ataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcat 96  Q
    |||||||||||| ||||| |||||||||| ||| |||| ||||||||||||||||||||| | |||| || |||||||    
T  37842431 ataagctataagttgttttcataagctatcttgaagaacttataaaaataagctgaaaactgcttatgaacatgtcat 37842354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 14 - 174
Target Start/End: Original strand, 2777881 - 2778040
Alignment:
Q  14 tttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagctgatttaaaaagt 113  Q
    |||||||||||||||||||||||  ||||| ||  |||||||| |||| |||||||||||||||| | |||| || | |||||||| || ||| | ||||    
T  2777881 tttgtataagctataagctgttttaataagttaacttggagaacttatgaaaataagctgaaaacggcttatgaatacgtcataagttggtttcataagt 2777980  T
Q  114 gttcccaaatagtcttaacaaagcttatgtcagtagataagctcaaatgagtcaatccaaa 174  Q
      ||| ||| |||| | ||||| ||||||  | |||||||||| |||| || |||||||||    
T  2777981 tctcctaaacagtc-tcacaaaacttatgcaaatagataagctaaaataagccaatccaaa 2778040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 4 - 99
Target Start/End: Complemental strand, 24915142 - 24915046
Alignment:
Q  4 ttaaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataag 99  Q
    ||||||| | |||||||| |||||||||||||| |||||||| | |||||||| || | |||||||| |||||| || |||| ||||||||||||||    
T  24915142 ttaaattgtttttgtatatgctataagctgttttcataagctgtcttggagaacttgtgaaaataagttgaaaaaagcttatgaaaaatgtcataag 24915046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 14 - 102
Target Start/End: Original strand, 43332473 - 43332561
Alignment:
Q  14 tttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagctg 102  Q
    |||||||||| | |||||||||| |||||||||| ||| |||  |||| |||||||||||||||||| ||| ||| | |||||||||||    
T  43332473 tttgtataagttgtaagctgttttcataagctatcttgaagagcttattaaaataagctgaaaacaggttagaaacaggtcataagctg 43332561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 174
Target Start/End: Complemental strand, 3234106 - 3233936
Alignment:
Q  4 ttaaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataagctg 102  Q
    ||||||| | |||||||| |||||||| |||||  |||||||||||||||||| |||| ||||||||  ||||| |  |||| |||| ||| ||||| ||    
T  3234106 ttaaattgtttttgtatatgctataagttgtttttataagctatattggagaacttatgaaaataagtagaaaaaaacttatgaaaactgttataagttg 3234007  T
Q  103 atttaaaaagtgttcccaaatagtcttaacaaagcttatgtcagtagataagctcaaatgagtcaatccaaa 174  Q
     ||| | ||||  |||| || |||| | ||||| |||| | || ||||||||||||||| ||||||||||||    
T  3234006 ttttcataagttctccctaacagtc-tcacaaaacttacggcactagataagctcaaataagtcaatccaaa 3233936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 24 - 102
Target Start/End: Original strand, 6102153 - 6102232
Alignment:
Q  24 ctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataagctg 102  Q
    ||||||||||||| |||||||||| | |||||||||||  |||||||||||||||| ||||| || ||| ||||||||||    
T  6102153 ctataagctgttttcataagctatctgggagaatttatggaaataagctgaaaacaatttatgaacaatatcataagctg 6102232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 102
Target Start/End: Complemental strand, 17603475 - 17603376
Alignment:
Q  4 ttaaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataagctg 102  Q
    ||||||| | |||||||| |||||||| |||||  |||||||||||||||||| || | |||||||| || ||| ||||||| |||| ||||||||||||    
T  17603475 ttaaattgtttttgtatatgctataagttgtttttataagctatattggagaacttctgaaaataagttgtaaaaagtttatgaaaattgtcataagctg 17603376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 161
Target Start/End: Complemental strand, 31517817 - 31517674
Alignment:
Q  18 tataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagctgatttaaaaagtgttc 117  Q
    ||||||||||||||||| | ||||| || | |||||||  |||| |||||||||||||||||| |||| || ||||||| || || ||| | ||||  ||    
T  31517817 tataagctataagctgtcttcataatctgtcttggagagcttatgaaaataagctgaaaacagcttatgaacatgtcatgagttgttttgataagttctc 31517718  T
Q  118 ccaaatagtcttaacaaagcttatgtcagtagataagctcaaat 161  Q
    ||||| ||||| |  |  ||||||| ||||| ||||||||||||    
T  31517717 ccaaacagtctcacaagtgcttatgccagtaaataagctcaaat 31517674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 101
Target Start/End: Complemental strand, 41195274 - 41195187
Alignment:
Q  14 tttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagct 101  Q
    ||||||||  |||| | |||||| ||||| |||| |||||||| |||| ||||||||||||||| || |||| |||||||||||||||    
T  41195274 tttgtatatactatcaactgttttcataaactatcttggagaacttatgaaaataagctgaaaaaagcttattaaaatgtcataagct 41195187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 24 - 102
Target Start/End: Original strand, 10744300 - 10744378
Alignment:
Q  24 ctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagctg 102  Q
    ||||||||||||| |||||||| | || ||||| ||||||||||||| ||||||||| |||| || ||| |||||||||    
T  10744300 ctataagctgttttcataagctgtcttagagaacttataaaaataagatgaaaacagcttatgaacatgccataagctg 10744378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 99
Target Start/End: Original strand, 4622086 - 4622167
Alignment:
Q  18 tataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataag 99  Q
    |||||||||||||||||||||||| ||||| |||||||  || | |||||||||| ||||||| ||||  | ||||||||||    
T  4622086 tataagctataagctgtttccatatgctatcttggagagcttgtgaaaataagctaaaaacagcttatggacatgtcataag 4622167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 79
Target Start/End: Complemental strand, 14630043 - 14629982
Alignment:
Q  18 tataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaaca 79  Q
    ||||||||||||||| ||| |||||||||| ||||||| |||||  ||||||||||||||||    
T  14630043 tataagctataagctattttcataagctatcttggagactttatggaaataagctgaaaaca 14629982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 102
Target Start/End: Original strand, 42174844 - 42174933
Alignment:
Q  14 tttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataagctg 102  Q
    |||||||| |||||||| |||||  ||||| |||||||||||| |||| |||||||| | ||||||| |||| |||| ||||||||||||    
T  42174844 tttgtatatgctataagttgtttttataagttatattggagaacttatgaaaataagttaaaaacagcttatgaaaattgtcataagctg 42174933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 17 - 85
Target Start/End: Original strand, 17778949 - 17779017
Alignment:
Q  17 gtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat 85  Q
    ||||| ||||||||| |||| |||||||||| ||||||||||| |  ||||||| ||||||||||||||    
T  17778949 gtatatgctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttat 17779017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 17 - 77
Target Start/End: Complemental strand, 51695573 - 51695513
Alignment:
Q  17 gtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaa 77  Q
    ||||||| ||| || ||||| |||||||||| ||||||||||||| |||||||||||||||    
T  51695573 gtataagttatcagatgttttcataagctatcttggagaatttatgaaaataagctgaaaa 51695513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 100
Target Start/End: Complemental strand, 5887064 - 5886989
Alignment:
Q  25 tataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagc 100  Q
    ||||||||||||| |||||| || |||||||| |||  |||||||||||||||||  |||| || |||||||||||    
T  5887064 tataagctgtttctataagccatcttggagaacttacgaaaataagctgaaaacaacttatgaacatgtcataagc 5886989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 180
Target Start/End: Original strand, 2295110 - 2295251
Alignment:
Q  39 ataagctatattggagaatttataaaaataagctgaaaacagtttataaaaat-gtcataagctgatttaaaaagtgttcccaaatagtcttaacaaagc 137  Q
    |||||||||||  ||||| || | |||||||| |||| | || |||| ||||| ||||||||||| ||| | ||||  ||||||| ||||| | |||| |    
T  2295110 ataagctatatcagagaacttgtgaaaataagttgaatagagcttatgaaaattgtcataagctgttttcataagttctcccaaacagtctca-caaaac 2295208  T
Q  138 ttatgtcagtagataagctcaaatgagtcaatccaaaaaggcc 180  Q
    ||||| |||||||||||||||||| || |||| |||| |||||    
T  2295209 ttatgccagtagataagctcaaataagccaattcaaacaggcc 2295251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 102
Target Start/End: Original strand, 35925697 - 35925767
Alignment:
Q  32 tgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagctg 102  Q
    ||||||||||||||||  |||||| |||||  ||||||| ||||||||| |||| || |||||||||||||    
T  35925697 tgtttccataagctatcatggagagtttatggaaataagttgaaaacagcttatgaacatgtcataagctg 35925767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 85
Target Start/End: Original strand, 2294890 - 2294971
Alignment:
Q  4 ttaaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat 85  Q
    ||||||| | |||| |||||||||||||| ||| ||||| |||| |||||||| |||  |||||||| ||||||||| ||||    
T  2294890 ttaaattgtttttggataagctataagctattttcataaactatcttggagaacttacgaaaataaggtgaaaacagcttat 2294971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 32113652 - 32113713
Alignment:
Q  19 ataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacag 80  Q
    |||| |||||| |||||| |||||| ||| ||||||| ||||| ||||||||||||||||||    
T  32113652 ataacctataaactgttttcataagttatgttggagattttatgaaaataagctgaaaacag 32113713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 35179134 - 35179199
Alignment:
Q  20 taagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat 85  Q
    |||| |||||||||||| |||||| |||  ||||||| |||| |||||||||||||||||| ||||    
T  35179134 taagttataagctgttttcataagttattatggagaacttatgaaaataagctgaaaacagcttat 35179199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 98
Target Start/End: Complemental strand, 27970386 - 27970290
Alignment:
Q  4 ttaaattatatttgtataagctataagctgtttccataagcta-tattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataa 98  Q
    ||||||| | |||||||| |||||||| ||||||||||| ||| | |||| ||| |||| ||||||| ||||||| || |||| |||||||||||||    
T  27970386 ttaaattgtttttgtatatgctataagttgtttccataaactatttttggggaacttatgaaaataaactgaaaaaagcttatgaaaaatgtcataa 27970290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 85
Target Start/End: Complemental strand, 6231893 - 6231826
Alignment:
Q  18 tataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat 85  Q
    ||||| ||||||||||||| | |||||||   || |||| ||||| ||||||||||||||||||||||    
T  6231893 tataatctataagctgttttcgtaagctaacctgaagaacttatagaaataagctgaaaacagtttat 6231826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 140 - 183
Target Start/End: Complemental strand, 24460356 - 24460313
Alignment:
Q  140 atgtcagtagataagctcaaatgagtcaatccaaaaaggcccta 183  Q
    ||||||||||||||| |||||| |||||||||||| ||||||||    
T  24460356 atgtcagtagataagttcaaataagtcaatccaaacaggcccta 24460313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 101
Target Start/End: Complemental strand, 27887195 - 27887112
Alignment:
Q  18 tataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagct 101  Q
    ||||||||||||| ||||| ||||| ||||  ||||||   |||||||||||||| |||||| |||||  | ||||||||||||    
T  27887195 tataagctataagttgttttcataaactatcatggagagcatataaaaataagctaaaaacaatttatggacatgtcataagct 27887112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 38 - 168
Target Start/End: Complemental strand, 37593741 - 37593611
Alignment:
Q  38 cataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagctgatttaaaaagtgttcccaaatagtcttaacaa-ag 136  Q
    |||||||||| ||| |||  |||| |||||||||||||||||| |||| || |||||||||| ||  || |  ||| |||||||| |||| ||||||  |    
T  37593741 cataagctattttgaagagcttatgaaaataagctgaaaacagcttatgaacatgtcataagttgtgttcattagttttcccaaacagtc-taacaagtg 37593643  T
Q  137 cttatgtcagtagataagctcaaatgagtcaa 168  Q
     ||||| ||||| |||||||||||| ||||||    
T  37593642 tttatgccagtatataagctcaaataagtcaa 37593611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 101
Target Start/End: Complemental strand, 40943303 - 40943221
Alignment:
Q  18 tataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagct 101  Q
    ||||| ||||||||||| || ||||||||| |||||||  || || ||||||| |||||||||||||| || |||| |||||||    
T  40943303 tataacctataagctgtatc-ataagctattttggagagcttgtagaaataagttgaaaacagtttatgaacatgttataagct 40943221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 79
Target Start/End: Complemental strand, 1232959 - 1232921
Alignment:
Q  41 aagctatattggagaatttataaaaataagctgaaaaca 79  Q
    ||||||| ||||||||||||| |||||||||||||||||    
T  1232959 aagctatcttggagaatttatgaaaataagctgaaaaca 1232921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 102
Target Start/End: Complemental strand, 1565626 - 1565528
Alignment:
Q  4 ttaaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagctg 102  Q
    ||||||| | |||||||||  | |||||||||| | ||| |||| |||||||  | || |||||||||||||||||| ||||  | |||||||||||||    
T  1565626 ttaaattgtttttgtataaagtgtaagctgttttcttaatctattttggagagctcatgaaaataagctgaaaacagcttatgcacatgtcataagctg 1565528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 182
Target Start/End: Original strand, 2295283 - 2295348
Alignment:
Q  116 tcccaaatagtcttaacaaagcttatgtcagtagataagctcaaatgagtcaatccaaaaaggccct 182  Q
    ||||||||||||| |  ||| |||| |||||||||||||||||||| || ||||||||| |||||||    
T  2295283 tcccaaatagtctcagaaaa-cttaagtcagtagataagctcaaataagccaatccaaacaggccct 2295348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 80
Target Start/End: Complemental strand, 7218151 - 7218089
Alignment:
Q  18 tataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacag 80  Q
    ||||||||||||| ||||| ||||| ||||  ||||||| |||| |||||||| |||||||||    
T  7218151 tataagctataagttgttttcataacctatcctggagaacttatgaaaataagttgaaaacag 7218089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 79
Target Start/End: Original strand, 14443449 - 14443503
Alignment:
Q  25 tataagctgtttccataagctatattggagaatttataaaaataagctgaaaaca 79  Q
    |||||| |||||  |||||||| |||||||||||||| |||||||| ||||||||    
T  14443449 tataaggtgtttttataagctacattggagaatttatgaaaataaggtgaaaaca 14443503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 117 - 187
Target Start/End: Original strand, 15784410 - 15784479
Alignment:
Q  117 cccaaatagtcttaacaaagcttatgtcagtagataagctcaaatgagtcaatccaaaaaggccctaggtc 187  Q
    |||||| ||||||| |||| ||||||| ||||||||||||||||| |||| ||||||  ||||||| ||||    
T  15784410 cccaaacagtctta-caaaacttatgttagtagataagctcaaataagtcgatccaattaggcccttggtc 15784479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 184
Target Start/End: Original strand, 27976642 - 27976760
Alignment:
Q  63 aaaataagctgaaaacagtttat-aaaaatgtcataagctgatttaaaaagtgttcccaaatagtcttaacaaagcttatgtcagtagataagctcaaat 161  Q
    ||||||||||||||| || |||| ||||||||||||||||  ||| |||||| || ||||| |||| ||||||| |||||||||||  || |||||||||    
T  27976642 aaaataagctgaaaaaagcttatgaaaaatgtcataagctattttcaaaagt-tttccaaacagtc-taacaaaacttatgtcagt-tat-agctcaaat 27976737  T
Q  162 gagtcaatccaaaaaggccctag 184  Q
     || ||||||||| | |||||||    
T  27976738 aagccaatccaaacaagccctag 27976760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 76
Target Start/End: Original strand, 39596586 - 39596648
Alignment:
Q  14 tttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaa 76  Q
    ||||||||||||||||| || ||  ||||||||| |||||||  ||||||||||||| |||||    
T  39596586 tttgtataagctataagatggttttataagctatcttggagagcttataaaaataagttgaaa 39596648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 183
Target Start/End: Original strand, 41505786 - 41505832
Alignment:
Q  137 cttatgtcagtagataagctcaaatgagtcaatccaaaaaggcccta 183  Q
    ||||||||||||||||||||||||| || ||||||||| | ||||||    
T  41505786 cttatgtcagtagataagctcaaataagccaatccaaacaagcccta 41505832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 174
Target Start/End: Complemental strand, 51929421 - 51929383
Alignment:
Q  136 gcttatgtcagtagataagctcaaatgagtcaatccaaa 174  Q
    |||||||||||||||||||||||||  ||||||||||||    
T  51929421 gcttatgtcagtagataagctcaaaaaagtcaatccaaa 51929383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 5090856 - 5090917
Alignment:
Q  19 ataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacag 80  Q
    |||||||||||||||||| ||||| |||||   ||||  |||| ||||||||||||||||||    
T  5090856 ataagctataagctgttttcataaactatacccgagatcttatgaaaataagctgaaaacag 5090917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 26 - 174
Target Start/End: Original strand, 5741607 - 5741755
Alignment:
Q  26 ataagctgtttccataagctatattggagaatttataaaaataagctgaaaaca-gtttataaaaatgtcataagctgatttaaaaagtgttcccaaata 124  Q
    ||||||| |||  |||||||||||| ||||| |||| ||||| ||||||||| |   |||| ||| ||||||||| || ||| | ||||  ||||||| |    
T  5741607 ataagctatttttataagctatattagagaacttatgaaaatcagctgaaaaaatacttatgaaattgtcataagttgttttcataagttctcccaaaca 5741706  T
Q  125 gtcttaacaaagcttatgtcagtagataagctcaaatgagtcaatccaaa 174  Q
    || | |||||| ||||||  ||||| ||||||||||| || |||||||||    
T  5741707 gt-tcaacaaaacttatgcaagtagttaagctcaaataagccaatccaaa 5741755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 85
Target Start/End: Original strand, 9656629 - 9656710
Alignment:
Q  4 ttaaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat 85  Q
    ||||||||| ||  ||||||||||||||||| | ||||||||||  ||||  | |||| |||||||||| ||||||| ||||    
T  9656629 ttaaattattttcatataagctataagctgtgttcataagctatcctggatgaattatgaaaataagctcaaaacagcttat 9656710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 14 - 99
Target Start/End: Complemental strand, 12287273 - 12287188
Alignment:
Q  14 tttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataag 99  Q
    |||||||| |||||||| ||||| | |||||||| ||   ||| ||| ||||||||||||||||||  |||| |||||| ||||||    
T  12287273 tttgtatatgctataagttgttttcttaagctatcttatggaacttacaaaaataagctgaaaacaacttatgaaaatgccataag 12287188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 14 - 79
Target Start/End: Original strand, 15558206 - 15558271
Alignment:
Q  14 tttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaaca 79  Q
    |||||| ||| |||||||||||| |||||| |||  | ||||| ||||| ||||||||||||||||    
T  15558206 tttgtaaaagttataagctgttttcataagatatcctagagaacttatagaaataagctgaaaaca 15558271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 99
Target Start/End: Complemental strand, 28482310 - 28482229
Alignment:
Q  18 tataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataag 99  Q
    |||||||||||||||||||  ||||| ||| |||||||  |||  |||||||||| |||| ||||||| || || |||||||    
T  28482310 tataagctataagctgtttttataagttatcttggagagcttacgaaaataagctaaaaatagtttatgaatatatcataag 28482229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 53 - 102
Target Start/End: Complemental strand, 30815695 - 30815646
Alignment:
Q  53 agaatttataaaaataagctgaaaacagtttataaaaatgtcataagctg 102  Q
    |||| |||| ||||||||||||||||| ||||| || |||||||||||||    
T  30815695 agaacttatgaaaataagctgaaaacattttatgaacatgtcataagctg 30815646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 40 - 77
Target Start/End: Complemental strand, 37631614 - 37631577
Alignment:
Q  40 taagctatattggagaatttataaaaataagctgaaaa 77  Q
    ||||||||||||||||| |||| |||||||||||||||    
T  37631614 taagctatattggagaacttatgaaaataagctgaaaa 37631577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 77
Target Start/End: Complemental strand, 38018455 - 38018382
Alignment:
Q  4 ttaaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaa 77  Q
    ||||||| | || |||||||||| ||||||||| ||||   ||| |||||||||| || |||||||||||||||    
T  38018455 ttaaattgttttcgtataagctagaagctgttttcatacattatcttggagaattcatgaaaataagctgaaaa 38018382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 77
Target Start/End: Original strand, 47432075 - 47432147
Alignment:
Q  4 ttaaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaa 77  Q
    ||||||| | |||| ||| |||||||| |||||  ||||| ||||||| ||||||||| |||||||||||||||    
T  47432075 ttaaattgtttttgaatatgctataaggtgtttt-ataagttatattgaagaatttatgaaaataagctgaaaa 47432147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 14 - 102
Target Start/End: Original strand, 49938736 - 49938825
Alignment:
Q  14 tttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacag-tttataaaaatgtcataagctg 102  Q
    |||||||| | |||||| |||||  |||||||||||| ||||| |||| |||||||| |||||| || |||  |||| ||||||||||||    
T  49938736 tttgtatatgttataagttgtttttataagctatattagagaacttatgaaaataagttgaaaaaagcttttgaaaattgtcataagctg 49938825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 99
Target Start/End: Complemental strand, 3070154 - 3070086
Alignment:
Q  32 tgtttccataagctatattggagaatttataaaaat-aagctgaaaacagtttataaaaatgtcataag 99  Q
    ||||| |||||||||| | |||||| |||||| ||| ||||||||||||| |||| || ||||||||||    
T  3070154 tgttttcataagctatttgggagaacttataataattaagctgaaaacagcttatgaacatgtcataag 3070086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 39 - 174
Target Start/End: Original strand, 5720939 - 5721074
Alignment:
Q  39 ataagctatattggagaatttataaaaataagctgaaaacagt-ttataaaaatgtcataagctgatttaaaaagtgttcccaaatagtcttaacaaagc 137  Q
    |||||||||||| |||||  ||| ||||| ||||||||| |   |||| ||| |||||||||||| ||| | ||||  ||||||| ||||  |||||| |    
T  5720939 ataagctatattagagaacatatgaaaatcagctgaaaaaatacttatgaaattgtcataagctgttttcataagttctcccaaacagtcc-aacaaaac 5721037  T
Q  138 ttatgtcagtagataagctcaaatgagtcaatccaaa 174  Q
    |||||  ||||| ||||||||||| || |||||||||    
T  5721038 ttatgcaagtagttaagctcaaataagccaatccaaa 5721074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 98
Target Start/End: Complemental strand, 18420931 - 18420851
Alignment:
Q  18 tataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataa 98  Q
    ||||||||||| ||| ||| || ||| ||| |||||||  ||| ||||||||| ||| |||| |||||||| |||||||||    
T  18420931 tataagctatatgctattttcacaagttatcttggagagcttacaaaaataagttgagaacactttataaacatgtcataa 18420851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 174
Target Start/End: Complemental strand, 29793655 - 29793619
Alignment:
Q  138 ttatgtcagtagataagctcaaatgagtcaatccaaa 174  Q
    |||||||||||||||||||||||| ||||||| ||||    
T  29793655 ttatgtcagtagataagctcaaataagtcaatacaaa 29793619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 98
Target Start/End: Original strand, 30257676 - 30257756
Alignment:
Q  18 tataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataa 98  Q
    |||||||| |||| ||||| ||||| ||||  |||||   ||||| ||||||||||||||||| |||| || |||||||||    
T  30257676 tataagctttaagttgttttcataaactatcctggagggcttatagaaataagctgaaaacagcttatgaacatgtcataa 30257756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 131 - 175
Target Start/End: Complemental strand, 38116041 - 38115997
Alignment:
Q  131 acaaagcttatgtcagtagataagctcaaatgagtcaatccaaaa 175  Q
    ||||| |||| |||||||||||||||||||| |||||||| ||||    
T  38116041 acaaaacttacgtcagtagataagctcaaataagtcaatctaaaa 38115997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 79
Target Start/End: Original strand, 38578506 - 38578582
Alignment:
Q  4 ttaaattatatttgtataagctataagctgtttccataagctatattggagaatttat-aaaaataagctgaaaaca 79  Q
    ||||||||| ||||||||||||||||| ||||| ||||| ||||   | ||| ||||| ||||||||||| ||||||    
T  38578506 ttaaattatttttgtataagctataagttgtttacataaactattgagaagagtttatgaaaaataagctcaaaaca 38578582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 39 - 79
Target Start/End: Complemental strand, 43722384 - 43722344
Alignment:
Q  39 ataagctatattggagaatttataaaaataagctgaaaaca 79  Q
    |||||||||||| ||||  ||||||||||||||||||||||    
T  43722384 ataagctatatttgagagcttataaaaataagctgaaaaca 43722344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 102
Target Start/End: Complemental strand, 45999317 - 45999281
Alignment:
Q  66 ataagctgaaaacagtttataaaaatgtcataagctg 102  Q
    |||||||||||||||||||| || |||||||||||||    
T  45999317 ataagctgaaaacagtttatgaacatgtcataagctg 45999281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 77
Target Start/End: Original strand, 49888759 - 49888819
Alignment:
Q  17 gtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaa 77  Q
    ||||||||||| || ||||| |||||||||| || ||||| |||| ||||||||| |||||    
T  49888759 gtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaa 49888819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 102
Target Start/End: Complemental strand, 51929607 - 51929531
Alignment:
Q  27 taagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataagctg 102  Q
    ||||||||||  |||| ||||||||||||| ||||  ||||||| |||||| || |||| |||| ||||||||||||    
T  51929607 taagctgtttttataaactatattggagaacttatggaaataagttgaaaaaagcttatgaaaattgtcataagctg 51929531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 54; Significance: 4e-22; HSPs: 64)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 680495 - 680580
Alignment:
Q  17 gtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagctg 102  Q
    |||||||||||||||| ||| |||||||||| ||| |||| || | |||||||||||||||||||||||||| |||||||||||||    
T  680495 gtataagctataagctattttcataagctatcttgaagaacttgtgaaaataagctgaaaacagtttataaacatgtcataagctg 680580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 156
Target Start/End: Original strand, 18066121 - 18066259
Alignment:
Q  18 tataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataagctgatttaaaaagtgtt 116  Q
    ||||||||||||||||||| |||||||||| |||||||| |||  |||||||| |||||| || |||| |  |||||||||||||| ||| | ||||  |    
T  18066121 tataagctataagctgttttcataagctatcttggagaacttaagaaaataaggtgaaaatagcttatgagcaatgtcataagctgttttcataagttgt 18066220  T
Q  117 cccaaatagtcttaacaaagcttatgtcagtagataagct 156  Q
     | ||| ||| || ||||| ||||||||||||||||||||    
T  18066221 acaaaacagt-ttcacaaaacttatgtcagtagataagct 18066259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 14 - 174
Target Start/End: Complemental strand, 33319893 - 33319737
Alignment:
Q  14 tttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagctgattta-aaaag 112  Q
    ||||||||  |||||| |||||| ||||| |||| |||||||| |||| ||||||||||||||| || ||||  |||||||||||||| ||||| |||||    
T  33319893 tttgtatatactataaactgttttcataaactatcttggagaacttatgaaaataagctgaaaaaagcttat-taaatgtcataagct-atttataaaag 33319796  T
Q  113 tgttcccaaatagtcttaacaaagcttatgtcagtagataagctcaaatgagtcaatccaaa 174  Q
    |  ||||||| |||||   || | |||||| ||||||| |||||||||| || |||||||||    
T  33319795 ttctcccaaacagtct---cacaacttatgccagtagacaagctcaaataagccaatccaaa 33319737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 161
Target Start/End: Original strand, 1625879 - 1626036
Alignment:
Q  4 ttaaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataagctg 102  Q
    ||||||| | || ||||||| |||||| ||||| |||||||||| |||||||| |||  ||||| |||||||||||  |||| || | |||||||||||     
T  1625879 ttaaattgttttcgtataagttataagttgttttcataagctatcttggagaacttacgaaaatcagctgaaaacatcttatgaacattgtcataagcta 1625978  T
Q  103 atttaaaaagtgttcccaaatagtcttaacaaagcttatgtcagtagataagctcaaat 161  Q
     ||| | ||||  || ||||||||||| ||||| ||||||||||  |||||||||||||    
T  1625979 ctttcataagttctctcaaatagtctt-acaaaacttatgtcaggggataagctcaaat 1626036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 38 - 182
Target Start/End: Original strand, 4606938 - 4607082
Alignment:
Q  38 cataagctatattggagaatttataaaaataagctgaaaacagtttataaa-aatgtcataagctgatttaaaaagtgttcccaaatagtcttaacaaag 136  Q
    |||||||||| |||||||| |||| |||||||||| ||| ||| | || || ||||||||||| || ||| | ||||  ||||||||||||| | ||||     
T  4606938 cataagctatcttggagaacttatgaaaataagctaaaagcagctcatgaacaatgtcataagttgttttcacaagttctcccaaatagtctca-caaaa 4607036  T
Q  137 cttatgtcagtagataagctcaaatgagtcaatccaaaaaggccct 182  Q
    ||||| |  |||||||||||||||| || ||||||||| |||||||    
T  4607037 cttatattggtagataagctcaaataagccaatccaaacaggccct 4607082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 174
Target Start/End: Original strand, 20952348 - 20952504
Alignment:
Q  18 tataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataagctgatttaaaaagtgtt 116  Q
    |||| |||||||| |||||  || ||||||||||||||| |||| |||||||| |||||| |||| || |||| || ||||| ||| ||| | ||||  |    
T  20952348 tatatgctataagttgtttttattagctatattggagaacttatgaaaataagttgaaaaaagttaatgaaaattggcataaactgttttcataagttct 20952447  T
Q  117 cccaaatagtcttaacaaagcttatgtcagtagataagctcaaatgagtcaatccaaa 174  Q
    |  |||||||| ||||||| ||| || ||||| |||||||||||| ||||||||||||    
T  20952448 cttaaatagtc-taacaaaacttttgccagtatataagctcaaataagtcaatccaaa 20952504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 85
Target Start/End: Complemental strand, 29628824 - 29628753
Alignment:
Q  14 tttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat 85  Q
    ||||||||||||||||| ||||  |||||||||| ||||| |||||||  |||||||||||||||| |||||    
T  29628824 tttgtataagctataagttgttctcataagctatcttggaaaatttatggaaataagctgaaaacaatttat 29628753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 85
Target Start/End: Original strand, 40279268 - 40279327
Alignment:
Q  26 ataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat 85  Q
    ||||| ||||| ||||||||||||||||||| |||| ||||| |||||||||||||||||    
T  40279268 ataagttgttttcataagctatattggagaacttatgaaaattagctgaaaacagtttat 40279327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 85
Target Start/End: Original strand, 40279338 - 40279397
Alignment:
Q  26 ataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat 85  Q
    ||||| ||||| ||||||||||||||||||| |||| ||||| |||||||||||||||||    
T  40279338 ataagttgttttcataagctatattggagaacttatgaaaattagctgaaaacagtttat 40279397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 85
Target Start/End: Original strand, 40279408 - 40279467
Alignment:
Q  26 ataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat 85  Q
    ||||| ||||| ||||||||||||||||||| |||| |||||||| ||||||||||||||    
T  40279408 ataagttgttttcataagctatattggagaacttatgaaaataagttgaaaacagtttat 40279467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 86 - 180
Target Start/End: Original strand, 42419855 - 42419948
Alignment:
Q  86 aaaaatgtcataagctgatttaaaaagtgttcccaaatagtcttaacaaagcttatgtcagtagataagctcaaatgagtcaatccaaaaaggcc 180  Q
    ||||||||||||||||| |||   ||||  ||||||| ||||| || ||| |||||||||| |||||| ||||||| ||||||||||||||||||    
T  42419855 aaaaatgtcataagctgttttcgtaagttctcccaaacagtctcaaaaaa-cttatgtcagaagataaactcaaataagtcaatccaaaaaggcc 42419948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 131 - 184
Target Start/End: Complemental strand, 10619184 - 10619131
Alignment:
Q  131 acaaagcttatgtcagtagataagctcaaatgagtcaatccaaaaaggccctag 184  Q
    ||||| ||| ||||||||||||| |||||||||||||||||||| |||||||||    
T  10619184 acaaaacttgtgtcagtagataaactcaaatgagtcaatccaaacaggccctag 10619131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 77
Target Start/End: Complemental strand, 12464564 - 12464491
Alignment:
Q  4 ttaaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaa 77  Q
    ||||||| | |||||||| |||||||||| ||| |||||||||| |||||||| || | |||||||||||||||    
T  12464564 ttaaattgtttttgtatatgctataagctattttcataagctatcttggagaacttgtgaaaataagctgaaaa 12464491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 106
Target Start/End: Complemental strand, 33931651 - 33931559
Alignment:
Q  14 tttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagctgattt 106  Q
    ||||||||||||||||||||||| |||||||||| |||||||| |  |  |||||||||||||  |  |||| || |||||||||| ||||||    
T  33931651 tttgtataagctataagctgttttcataagctattttggagaaatagtggaaataagctgaaataaacttatgaacatgtcataagttgattt 33931559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 99
Target Start/End: Original strand, 41851514 - 41851610
Alignment:
Q  4 ttaaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataag 99  Q
    ||||||| | |||||||| |||||||| ||||| || ||||||| ||||||||||||| ||| |||||||| || || |||| |||| |||||||||    
T  41851514 ttaaattgtttttgtatatgctataagttgttttcagaagctatcttggagaatttatgaaattaagctgagaaaagcttatgaaaagtgtcataag 41851610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 26372686 - 26372639
Alignment:
Q  136 gcttatgtcagtagataagctcaaatgagtcaatccaaaaaggcccta 183  Q
    ||||||||||| ||||||||||||||||||||||||||| || |||||    
T  26372686 gcttatgtcagaagataagctcaaatgagtcaatccaaagagacccta 26372639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 29316851 - 29316768
Alignment:
Q  19 ataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagctg 102  Q
    |||| ||||||||||||| ||| |||||| |||||||| ||||  |||||||||||||| |  |||| || |||||||||||||    
T  29316851 ataatctataagctgttttcatcagctatcttggagaacttatggaaataagctgaaaagaacttatgaacatgtcataagctg 29316768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 86 - 173
Target Start/End: Complemental strand, 31561750 - 31561664
Alignment:
Q  86 aaaaatgtcataagctgatttaaaaagtgttcccaaatagtcttaacaaagcttatgtcagtagataagctcaaatgagtcaatccaa 173  Q
    ||||| |||||| |||| ||| |||||| |||||||| ||| ||| |||| ||||||| ||||||||| ||||||| |||||||||||    
T  31561750 aaaaacgtcatatgctgttttcaaaagttttcccaaacagtttta-caaaacttatgttagtagataatctcaaataagtcaatccaa 31561664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 101
Target Start/End: Original strand, 750663 - 750747
Alignment:
Q  17 gtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataagct 101  Q
    ||||||||||| |||||||| |||||||||| |||||||| ||||  ||||||||| ||||||| |||| || |||||||| ||||    
T  750663 gtataagctatgagctgttt-cataagctatcttggagaacttatgcaaataagctcaaaacagcttatgaacaatgtcattagct 750747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 8 - 80
Target Start/End: Original strand, 2142636 - 2142709
Alignment:
Q  8 attatatttgtataagctataagctgtttccataagctatatt-ggagaatttataaaaataagctgaaaacag 80  Q
    ||||| ||||||||||||||||| ||||| |||||  ||| || ||||||||||| |||||||||| |||||||    
T  2142636 attatttttgtataagctataagttgttttcataatttatcttgggagaatttatgaaaataagctaaaaacag 2142709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 99
Target Start/End: Original strand, 3611232 - 3611301
Alignment:
Q  31 ctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataag 99  Q
    |||||| || ||||||| |||||||| |||| |||||||||| |||||||||||| || |||||||||||    
T  3611232 ctgttttcacaagctatcttggagaacttatgaaaataagctaaaaacagtttatgaataatgtcataag 3611301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 49 - 102
Target Start/End: Complemental strand, 5902595 - 5902542
Alignment:
Q  49 ttggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagctg 102  Q
    ||||||||  |||||||| |||||||||||||||||| || |||||||||||||    
T  5902595 ttggagaacatataaaaacaagctgaaaacagtttatgaacatgtcataagctg 5902542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 182
Target Start/End: Complemental strand, 7928351 - 7928211
Alignment:
Q  43 gctatattggagaatttataaaaataagctgaaaacagtttataaa-aatgtc-ataagctgatttaaaaagtgttcccaaatagtcttaacaaagctta 140  Q
    ||||| |||||||| |||| |||||||||||||||||  |||| || |||||| |||||||| ||| ||||||  |  | || ||||| | || | ||||    
T  7928351 gctatcttggagaacttatgaaaataagctgaaaacaacttatgaacaatgtccataagctgttttcaaaagttctttctaacagtctca-cacaactta 7928253  T
Q  141 tgtcagtagataagctcaaatgagtcaatccaaaaaggccct 182  Q
    ||||| ||||||||||||||| || ||||||||| |||||||    
T  7928252 tgtcaatagataagctcaaataagccaatccaaacaggccct 7928211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 180
Target Start/End: Original strand, 9174814 - 9174970
Alignment:
Q  24 ctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataagctgatttaaaaagtgttcccaaa 122  Q
    ||||||||||||| |||||||||| ||  |||  |||| ||||||||||||||| || |||| || ||||||||||| || ||||| |||    | ||||    
T  9174814 ctataagctgttttcataagctatcttacagagcttatgaaaataagctgaaaatagcttatgaacaatgtcataagttgttttaacaagccccctcaaa 9174913  T
Q  123 tagtcttaacaaagcttatgtcagtagataagctcaaatgagtcaatccaaaaaggcc 180  Q
     |||| | ||| | |||||| || ||||||||||||||| ||| |||||||| |||||    
T  9174914 cagtc-tcacataacttatgccaatagataagctcaaataagtaaatccaaataggcc 9174970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 131 - 188
Target Start/End: Original strand, 15305780 - 15305837
Alignment:
Q  131 acaaagcttatgtcagtagataagctcaaatgagtcaatccaaaaaggccctaggtcc 188  Q
    ||||| ||||||||| ||||||||||||||| || ||||||||| |||||||| ||||    
T  15305780 acaaaacttatgtcaatagataagctcaaataagccaatccaaacaggccctaagtcc 15305837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 174
Target Start/End: Original strand, 40158710 - 40158867
Alignment:
Q  17 gtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagctgatttaaaaagtgtt 116  Q
    |||||||| ||||| ||||| |||||| |||  ||||||  ||||  || |||||||||||||  ||||||| ||||||||||||| ||| | ||||       
T  40158710 gtataagcaataagttgttttcataagttattctggagagcttatgtaattaagctgaaaacaacttataaacatgtcataagctgttttcataagttcc 40158809  T
Q  117 cccaaatagtcttaacaaagcttatgtcagtagataagctcaaatgagtcaatccaaa 174  Q
    |||||  ||||| |  |   |||||||||||||||| |||||||| || |||||||||    
T  40158810 cccaatcagtctcacaagttcttatgtcagtagatatgctcaaataagccaatccaaa 40158867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 79
Target Start/End: Complemental strand, 42621452 - 42621391
Alignment:
Q  18 tataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaaca 79  Q
    ||||||||||||||||||| |||||| |||  ||||||| || | |||||||||||||||||    
T  42621452 tataagctataagctgttttcataagttattctggagaacttgtgaaaataagctgaaaaca 42621391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 180
Target Start/End: Complemental strand, 15370282 - 15370238
Alignment:
Q  136 gcttatgtcagtagataagctcaaatgagtcaatccaaaaaggcc 180  Q
    ||||||| |||||||||||||||||| |||||||||||| |||||    
T  15370282 gcttatgccagtagataagctcaaataagtcaatccaaacaggcc 15370238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 183
Target Start/End: Original strand, 30331857 - 30331909
Alignment:
Q  131 acaaagcttatgtcagtagataagctcaaatgagtcaatccaaaaaggcccta 183  Q
    ||||| |||||||||||||||||||| |||| |||||||||||| | ||||||    
T  30331857 acaaaacttatgtcagtagataagctgaaataagtcaatccaaacaagcccta 30331909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 102
Target Start/End: Complemental strand, 43279601 - 43279521
Alignment:
Q  23 gctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataagctg 102  Q
    |||||||| |||||  |||||||||||||||||| || | |||||||| |||||| || |||| |||| ||||||||||||    
T  43279601 gctataagttgtttttataagctatattggagaacttgtgaaaataagttgaaaaaagcttatgaaaattgtcataagctg 43279521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 136 - 183
Target Start/End: Original strand, 1830150 - 1830197
Alignment:
Q  136 gcttatgtcagtagataagctcaaatgagtcaatccaaaaaggcccta 183  Q
    ||||||||||||| |||| ||||||| |||||||||||| ||||||||    
T  1830150 gcttatgtcagtaaataaactcaaataagtcaatccaaacaggcccta 1830197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 131 - 174
Target Start/End: Original strand, 18179055 - 18179098
Alignment:
Q  131 acaaagcttatgtcagtagataagctcaaatgagtcaatccaaa 174  Q
    ||||| ||||||| ||||||||||||||||| ||||||||||||    
T  18179055 acaaaacttatgttagtagataagctcaaataagtcaatccaaa 18179098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 18179317 - 18179258
Alignment:
Q  18 tataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaa 77  Q
    |||||||||||||||| || ||||||||||  ||||||| |||  |||||||||||||||    
T  18179317 tataagctataagctgctttcataagctatcctggagaacttacgaaaataagctgaaaa 18179258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 39 - 181
Target Start/End: Original strand, 36534782 - 36534924
Alignment:
Q  39 ataagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataagctgatttaaaaagtgttcccaaatagtcttaacaaagc 137  Q
    ||||||||||| |||||||| || ||||||||||||||| || |||| || ||| | |||||||| ||| | ||||  ||||||| |||| | ||||| |    
T  36534782 ataagctatataggagaattaatgaaaataagctgaaaatagattatgaacaattttataagctgttttcataagttatcccaaacagtc-tcacaaaac 36534880  T
Q  138 ttatgtcagtagataagctcaaatgagtcaatccaaaaaggccc 181  Q
    |||||  || | |||||||||||| || ||||| ||| ||||||    
T  36534881 ttatgaaagcatataagctcaaataagccaatctaaataggccc 36534924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 80
Target Start/End: Original strand, 16398115 - 16398169
Alignment:
Q  26 ataagctgtttccataagctatattggagaatttataaaaataagctgaaaacag 80  Q
    ||||||| ||| |||||| ||| |||||||| |||| ||||||||||||||||||    
T  16398115 ataagctattttcataagttatgttggagaacttatgaaaataagctgaaaacag 16398169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 85
Target Start/End: Original strand, 19826266 - 19826324
Alignment:
Q  27 taagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat 85  Q
    |||| ||||| ||||||||||| |||||| ||||| |||||||| ||||| ||||||||    
T  19826266 taagatgttttcataagctatactggagagtttatgaaaataagttgaaatcagtttat 19826324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 174
Target Start/End: Original strand, 22878209 - 22878247
Alignment:
Q  136 gcttatgtcagtagataagctcaaatgagtcaatccaaa 174  Q
    |||||||||||| ||||||||||||| ||||||||||||    
T  22878209 gcttatgtcagtggataagctcaaataagtcaatccaaa 22878247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 77
Target Start/End: Complemental strand, 26143708 - 26143658
Alignment:
Q  27 taagctgtttccataagctatattggagaatttataaaaataagctgaaaa 77  Q
    |||||||||| |||||||||  |||||||| |||| |||||||||||||||    
T  26143708 taagctgttttcataagctaacttggagaacttatgaaaataagctgaaaa 26143658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 179
Target Start/End: Original strand, 27317491 - 27317533
Alignment:
Q  137 cttatgtcagtagataagctcaaatgagtcaatccaaaaaggc 179  Q
    |||||||| |||||||||||||||| |||||||||||| ||||    
T  27317491 cttatgtcggtagataagctcaaataagtcaatccaaacaggc 27317533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 174
Target Start/End: Complemental strand, 28677690 - 28677580
Alignment:
Q  64 aaataagctgaaaacagtttataaaaatgtcataagctgatttaaaaagtgttcccaaatagtcttaacaaagcttatgtcagtagataagctcaaatga 163  Q
    |||||||| |||||||  |||| |||||||||||||||| ||| | ||||  ||||||| ||||||| ||   ||||||  |||| |||||||||||  |    
T  28677690 aaataagccgaaaacaacttatgaaaatgtcataagctgttttcataagttctcccaaacagtcttagcagtacttatgcaagtaaataagctcaaaaaa 28677591  T
Q  164 gtcaatccaaa 174  Q
     ||||||||||    
T  28677590 atcaatccaaa 28677580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 183
Target Start/End: Complemental strand, 44438920 - 44438753
Alignment:
Q  14 tttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagctgatttaaaaagt 113  Q
    |||||| |||| ||||||||| | |||||| |||  ||||||  || |  ||||||||||||||||| |||| || ||||||||||||| ||| | | ||    
T  44438920 tttgtacaagccataagctgtcttcataagttatcctggagatcttgtggaaataagctgaaaacaggttatgaacatgtcataagctgttttcacatgt 44438821  T
Q  114 gttcccaaatagtcttaacaaagcttatgtcagtagataagctcaaatgagtcaatccaaaaaggcccta 183  Q
       |||| | ||||| ||   |  ||||||| |||||||||||||||| ||||||| |||| ||||||||    
T  44438820 tcccccagacagtctcaagtga--ttatgtctgtagataagctcaaatcagtcaattcaaacaggcccta 44438753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 14 - 55
Target Start/End: Complemental strand, 579518 - 579477
Alignment:
Q  14 tttgtataagctataagctgtttccataagctatattggaga 55  Q
    ||||||||||||||||||||||| |||||| ||| |||||||    
T  579518 tttgtataagctataagctgtttacataagttatgttggaga 579477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 101
Target Start/End: Original strand, 1810644 - 1810740
Alignment:
Q  4 ttaaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagct 101  Q
    ||||||| | |||||||||| |||| | |||||  ||||||||| ||| ||| ||||| ||||||||||||||| |||||||  |  |||||||||||    
T  1810644 ttaaattgtttttgtataagttata-gttgtttttataagctatcttgaagagtttatgaaaataagctgaaaaaagtttattgacctgtcataagct 1810740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 77
Target Start/End: Complemental strand, 1893371 - 1893299
Alignment:
Q  4 ttaaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaa 77  Q
    ||||||||| || ||| |||||||||||||||| |  ||||||| |||||||| || | |||||||||||||||    
T  1893371 ttaaattat-ttcgtaaaagctataagctgttttcggaagctatcttggagaacttgtgaaaataagctgaaaa 1893299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 49 - 102
Target Start/End: Complemental strand, 5902658 - 5902605
Alignment:
Q  49 ttggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagctg 102  Q
    |||||||| ||||||||  |||||||||||||||||| || | |||||||||||    
T  5902658 ttggagaacttataaaatcaagctgaaaacagtttatgaacacgtcataagctg 5902605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 40 - 101
Target Start/End: Original strand, 12464679 - 12464740
Alignment:
Q  40 taagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagct 101  Q
    |||||||| ||| |||| |||| |||||||||||| ||||  |||||||||||| |||||||    
T  12464679 taagctatcttgaagaacttatgaaaataagctgagaacaacttataaaaatgtgataagct 12464740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 32 - 85
Target Start/End: Original strand, 15977992 - 15978045
Alignment:
Q  32 tgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat 85  Q
    ||||| |||||||||| |||||||  |||| ||||||||||||||||| |||||    
T  15977992 tgttttcataagctattttggagagattatgaaaataagctgaaaacaatttat 15978045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 119 - 172
Target Start/End: Complemental strand, 17775442 - 17775389
Alignment:
Q  119 caaatagtcttaacaaagcttatgtcagtagataagctcaaatgagtcaatcca 172  Q
    |||| |||||||| | |||||||||||||||||| |||||||| ||| ||||||    
T  17775442 caaacagtcttaaaagagcttatgtcagtagatatgctcaaataagttaatcca 17775389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 23 - 99
Target Start/End: Original strand, 26202026 - 26202103
Alignment:
Q  23 gctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataag 99  Q
    |||||||| |||||  ||||| |||||||||||| |||| |||||||| |||||| || |||| |||| |||||||||    
T  26202026 gctataagttgtttttataagatatattggagaacttatgaaaataagttgaaaaaagcttatgaaaattgtcataag 26202103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 14 - 91
Target Start/End: Original strand, 32592575 - 32592652
Alignment:
Q  14 tttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaat 91  Q
    |||||||| |||||||| |||||  |||||| ||||||||||| |||| |||||||| ||| || || |||| |||||    
T  32592575 tttgtatacgctataagttgtttttataagcaatattggagaacttatgaaaataagttgagaaaagcttatgaaaat 32592652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 72
Target Start/End: Complemental strand, 6167358 - 6167306
Alignment:
Q  20 taagctataagctgtttccataagctatattggagaatttataaaaataagct 72  Q
    |||||||||||||||||  ||||||||| |||||||| ||||  |||||||||    
T  6167358 taagctataagctgtttttataagctattttggagaacttatggaaataagct 6167306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 86
Target Start/End: Original strand, 11513891 - 11513959
Alignment:
Q  18 tataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttata 86  Q
    ||||||||||||| ||||| ||||||||||  ||||||| || |  |||||||||||||| || |||||    
T  11513891 tataagctataagttgttttcataagctatcatggagaacttttggaaataagctgaaaatagcttata 11513959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 86
Target Start/End: Complemental strand, 13736366 - 13736302
Alignment:
Q  22 agctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttata 86  Q
    ||||||||||||||| ||||||||||| | ||||  |||| |||||||  ||||||||| |||||    
T  13736366 agctataagctgttttcataagctatactagagagcttatgaaaataacttgaaaacagcttata 13736302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 95
Target Start/End: Complemental strand, 19333397 - 19333325
Alignment:
Q  23 gctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtca 95  Q
    |||| ||||||||| | ||| ||||||||||||  |||| |||||||||||| ||||| |||| || ||||||    
T  19333397 gctacaagctgttttcttaaactatattggagagcttatgaaaataagctgagaacagcttatgaacatgtca 19333325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 58
Target Start/End: Original strand, 25800822 - 25800862
Alignment:
Q  18 tataagctataagctgtttccataagctatattggagaatt 58  Q
    ||||||||||||||||||| |||||||||| ||| ||||||    
T  25800822 tataagctataagctgttttcataagctatcttgaagaatt 25800862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 180
Target Start/End: Complemental strand, 28803489 - 28803445
Alignment:
Q  136 gcttatgtcagtagataagctcaaatgagtcaatccaaaaaggcc 180  Q
    ||||||| | |||||||||||||||| |||||||||||| |||||    
T  28803489 gcttatgccggtagataagctcaaataagtcaatccaaataggcc 28803445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 102
Target Start/End: Original strand, 33256733 - 33256817
Alignment:
Q  18 tataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagctg 102  Q
    ||||| |||||||| |||| ||||||| ||  || |||   ||| |||||||||||| |||||||||| || |||||||||||||    
T  33256733 tataaactataagcagttttcataagccatcctgaagaccgtatgaaaataagctgagaacagtttatgaacatgtcataagctg 33256817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 106
Target Start/End: Original strand, 33503048 - 33503088
Alignment:
Q  66 ataagctgaaaacagtttataaaaatgtcataagctgattt 106  Q
    |||||||||||| || |||| ||||||||||||||||||||    
T  33503048 ataagctgaaaatagcttatgaaaatgtcataagctgattt 33503088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 174
Target Start/End: Complemental strand, 40059418 - 40059382
Alignment:
Q  138 ttatgtcagtagataagctcaaatgagtcaatccaaa 174  Q
    |||||||||||||||| ||||||| ||||||||||||    
T  40059418 ttatgtcagtagataaactcaaataagtcaatccaaa 40059382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 174
Target Start/End: Complemental strand, 40085318 - 40085282
Alignment:
Q  138 ttatgtcagtagataagctcaaatgagtcaatccaaa 174  Q
    |||||||||||||||| ||||||| ||||||||||||    
T  40085318 ttatgtcagtagataaactcaaataagtcaatccaaa 40085282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 180
Target Start/End: Original strand, 40759271 - 40759315
Alignment:
Q  136 gcttatgtcagtagataagctcaaatgagtcaatccaaaaaggcc 180  Q
    |||||||||| ||||||||||||||| || ||||||||| |||||    
T  40759271 gcttatgtcaatagataagctcaaataaggcaatccaaacaggcc 40759315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 174
Target Start/End: Complemental strand, 40837394 - 40837358
Alignment:
Q  138 ttatgtcagtagataagctcaaatgagtcaatccaaa 174  Q
    |||||||||||||||||||||||| || |||||||||    
T  40837394 ttatgtcagtagataagctcaaataagccaatccaaa 40837358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 161
Target Start/End: Original strand, 43036574 - 43036692
Alignment:
Q  42 agctatattggagaatttataaaaataagctgaaaacagtttataaa-aatgtcataagctgatttaaaaagtgttcccaaatagtcttaacaaagctta 140  Q
    |||||| ||||| || |||| ||| |||||| |||||||||||| || ||||||||||| || | | | |||| |||||||||| ||| | |||| ||||    
T  43036574 agctatcttggaaaacttatgaaagtaagct-aaaacagtttatgaataatgtcataagatgttctcataagttttcccaaatactctca-caaaactta 43036671  T
Q  141 tgtcagtagataagctcaaat 161  Q
    ||| | |||||||||||||||    
T  43036672 tgtaactagataagctcaaat 43036692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 99
Target Start/End: Original strand, 45229518 - 45229586
Alignment:
Q  32 tgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataag 99  Q
    ||||| |||||||||| || ||||| |||| ||||||||||||||| || | || ||||||||||||||    
T  45229518 tgttttcataagctatcttcgagaacttatgaaaataagctgaaaaaagctaatgaaaaatgtcataag 45229586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 52; Significance: 7e-21; HSPs: 57)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 4 - 174
Target Start/End: Original strand, 20880455 - 20880625
Alignment:
Q  4 ttaaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataagctg 102  Q
    ||||||| | |||||||| ||||||| ||||||  | |||||||||||||||| |||| |||||||||| |||| || |||| |||| ||||||||||||    
T  20880455 ttaaattgtttttgtatatgctataaactgtttttaaaagctatattggagaacttatgaaaataagctcaaaaaagcttatgaaaattgtcataagctg 20880554  T
Q  103 atttaaaaagtgttcccaaatagtcttaacaaagcttatgtcagtagataagctcaaatgagtcaatccaaa 174  Q
     ||| | | ||  |||||||||||| |||  || ||||||  ||||||||||||||||| || |||||||||    
T  20880555 ttttcataggttctcccaaatagtc-taaggaaacttatgcaagtagataagctcaaataagccaatccaaa 20880625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 166
Target Start/End: Complemental strand, 34610897 - 34610735
Alignment:
Q  4 ttaaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaa-aatgtcataagctg 102  Q
    ||||||||| |||||| ||| |||||| || || |||||||||| |||| ||| |||| ||||| ||||||||||   |||| || |||||||||||| |    
T  34610897 ttaaattatttttgtacaagttataagttgctttcataagctatcttggcgaacttatgaaaatcagctgaaaaccacttatgaacaatgtcataagcag 34610798  T
Q  103 atttaaaaagtgttcccaaatagtcttaacaaagcttatgtcagtagataagctcaaatgagtc 166  Q
     ||| | ||||  |||||||||||  || |||| ||||||||||||||||||||||||| ||||    
T  34610797 ttttcataagttctcccaaatagttgta-caaaacttatgtcagtagataagctcaaataagtc 34610735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 15 - 174
Target Start/End: Complemental strand, 36507171 - 36507013
Alignment:
Q  15 ttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagctgatttaaaaagtg 114  Q
    ||||||||||||||||| | || ||||| |||| ||||||||||||||||||||||||||||  |  ||||||| | ||||||||||  ||| | ||||     
T  36507171 ttgtataagctataagcagctttcataaactattttggagaatttataaaaataagctgaaa--aacttataaacacgtcataagctattttcagaagtc 36507074  T
Q  115 ttcccaaatagtcttaacaaag--cttatgtcagtagataagctcaaatgagtcaatccaaa 174  Q
     ||||||| |||| | ||||||  ||||| ||||||||||| ||||||| || |||||||||    
T  36507073 ctcccaaacagtc-tcacaaagctcttatatcagtagataaactcaaataagccaatccaaa 36507013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 14 - 80
Target Start/End: Complemental strand, 50600259 - 50600193
Alignment:
Q  14 tttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacag 80  Q
    |||| |||||||||||||||||| ||| ||||||||||||||| |||| ||||||||||||||||||    
T  50600259 tttgaataagctataagctgttttcatcagctatattggagaacttatgaaaataagctgaaaacag 50600193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 14 - 99
Target Start/End: Original strand, 1816572 - 1816657
Alignment:
Q  14 tttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataag 99  Q
    |||||||||| |||||| ||||| ||||||||||| ||||||  |||| ||||||||||||||||||  ||| |||||||||||||    
T  1816572 tttgtataagatataagttgttttcataagctatactggagagcttatcaaaataagctgaaaacagcctatgaaaatgtcataag 1816657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 17 - 102
Target Start/End: Complemental strand, 39602288 - 39602203
Alignment:
Q  17 gtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagctg 102  Q
    ||||||| |||||||||||| |||||||||| || ||||| |||| |||||||| |||||||| ||||| || |||||||||||||    
T  39602288 gtataagttataagctgttttcataagctatctttgagaacttatgaaaataagttgaaaacaatttatgaacatgtcataagctg 39602203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 14 - 161
Target Start/End: Original strand, 30443882 - 30444029
Alignment:
Q  14 tttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataagctgatttaaaaag 112  Q
    |||||||| ||||||||||||||  |||| ||||||||||||| |||| ||||||||||||||| || || | |||| |||||||||||| ||| | |||    
T  30443882 tttgtatatgctataagctgtttttataaactatattggagaacttatgaaaataagctgaaaaaagcttgtgaaaattgtcataagctgttttcataag 30443981  T
Q  113 tgttcccaaatagtcttaacaaagcttatgtcagtagataagctcaaat 161  Q
       | ||||| ||||| | ||||  ||||| ||||||||||||||||||    
T  30443982 ctctaccaaacagtctcaccaaa-tttatgccagtagataagctcaaat 30444029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 174
Target Start/End: Original strand, 21367646 - 21367816
Alignment:
Q  4 ttaaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataagctg 102  Q
    ||||||| | || ||||||  |||||| ||||| |||||||||| |||||||| |||| |||||||||||||||||| || | || ||||||||||||||    
T  21367646 ttaaattgttttcgtataatgtataagttgttttcataagctatcttggagaacttatgaaaataagctgaaaacagcttgtgaacaatgtcataagctg 21367745  T
Q  103 atttaaaaagtgttcccaaatagtcttaacaaagcttatgtcagtagataagctcaaatgagtcaatccaaa 174  Q
     ||| | ||||  ||||||| ||||   ||||| ||||||   |||||||| ||||||| || |||||||||    
T  21367746 ttttcataagttctcccaaacagtc-ccacaaaacttatgctggtagataatctcaaataagccaatccaaa 21367816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 96
Target Start/End: Original strand, 40665410 - 40665500
Alignment:
Q  6 aaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcat 96  Q
    ||||||| ||||| |||| |||||| ||||| |||||| ||| |||||||  ||||||||||||||||||||||| |||| || |||||||    
T  40665410 aaattatttttgtgtaagttataagatgttttcataagttatcttggagagcttataaaaataagctgaaaacagcttatgaacatgtcat 40665500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 4 - 77
Target Start/End: Complemental strand, 35959547 - 35959474
Alignment:
Q  4 ttaaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaa 77  Q
    ||||||||| |||||||| ||| |||| |||||| |||||||||||| |||||||| | |||||||||||||||    
T  35959547 ttaaattatttttgtatatgctgtaagttgtttctataagctatattagagaatttttgaaaataagctgaaaa 35959474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 30 - 98
Target Start/End: Complemental strand, 3845627 - 3845559
Alignment:
Q  30 gctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataa 98  Q
    ||||||| |||||| ||| |||||||| |||| ||||||||||||||| || |||||||||||||||||    
T  3845627 gctgttttcataagttatcttggagaacttatgaaaataagctgaaaaaagattataaaaatgtcataa 3845559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 32 - 170
Target Start/End: Complemental strand, 9832818 - 9832680
Alignment:
Q  32 tgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataagctgatttaaaaagtgttcccaaatagtctta 130  Q
    ||||| ||||| || | ||| |||| ||||||| ||||| |||||| ||||||| ||||| | ||||||||| ||| ||||||  ||||||| ||| ||     
T  9832818 tgttttcataaactgtcttgaagaacttataaatataagttgaaaaaagtttatgaaaaaaggcataagctgttttcaaaagttctcccaaacagt-ttg 9832720  T
Q  131 acaaagcttatgtcagtagataagctcaaatgagtcaatc 170  Q
    ||||| ||||||||| || |||||||||||| ||||||||    
T  9832719 acaaaacttatgtcaataaataagctcaaataagtcaatc 9832680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 75
Target Start/End: Complemental strand, 46886783 - 46886712
Alignment:
Q  4 ttaaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaa 75  Q
    ||||||||| ||||||| ||||||||||||||| |||||||||| |||||||| || | ||||||| |||||    
T  46886783 ttaaattatttttgtatgagctataagctgttttcataagctatcttggagaacttttgaaaataacctgaa 46886712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 180
Target Start/End: Complemental strand, 402633 - 402457
Alignment:
Q  4 ttaaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataagctg 102  Q
    ||||||| | || ||||||| ||||||||||||  |||| |||| ||| |||| || | ||| |||||||||||||| |||| || ||||||||||||||    
T  402633 ttaaattgttttcgtataagttataagctgtttttataatctatcttgaagaacttgtgaaattaagctgaaaacagcttatgaacaatgtcataagctg 402534  T
Q  103 atttaaaaagtgttcccaaatagtcttaacaaagcttatgtcagtagataagctcaaatgagtcaatccaaaaaggcc 180  Q
     ||| | | ||  ||||||| ||||||  |||| ||||||| ||| ||||| |||||||  ||||| ||||| |||||    
T  402533 ttttcatacgttctcccaaacagtctt-gcaaaacttatgttagttgataaactcaaataggtcaacccaaacaggcc 402457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 79
Target Start/End: Original strand, 2719457 - 2719522
Alignment:
Q  14 tttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaaca 79  Q
    ||||| |||||||||| |||||| |||||||||| |||||||| |||| |||||||||||| ||||    
T  2719457 tttgtttaagctataaactgttttcataagctatcttggagaacttatgaaaataagctgagaaca 2719522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 102
Target Start/End: Original strand, 46030983 - 46031068
Alignment:
Q  18 tataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataagctg 102  Q
    ||||| || ||||||||||| |||| |||| |||||||| |||| |||||||||||||||||| |||| || ||||||||| ||||    
T  46030983 tataacctgtaagctgtttcaataaactatcttggagaacttattaaaataagctgaaaacagcttatgaataatgtcataggctg 46031068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 16 - 76
Target Start/End: Complemental strand, 44747487 - 44747427
Alignment:
Q  16 tgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaa 76  Q
    |||||| |||||||||||||| |||||||||| ||||| || |||| ||||||||||||||    
T  44747487 tgtataggctataagctgttttcataagctatcttggaaaacttatgaaaataagctgaaa 44747427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 39 - 122
Target Start/End: Complemental strand, 23808120 - 23808037
Alignment:
Q  39 ataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagctgatttaaaaagtgttcccaaa 122  Q
    ||||||||| ||||||| ||||| |||||||| |||||||| ||| | || ||||||||||||| ||| | |||| ||||||||    
T  23808120 ataagctatcttggagagtttatgaaaataagatgaaaacaatttgtgaacatgtcataagctgctttcataagttttcccaaa 23808037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 85
Target Start/End: Complemental strand, 28622080 - 28622009
Alignment:
Q  14 tttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat 85  Q
    ||||| ||||||||||||||||| ||||| |||| || ||||| |||| ||||||| |||||||||| ||||    
T  28622080 tttgtgtaagctataagctgttttcataaactatcttcgagaacttatgaaaataacctgaaaacagcttat 28622009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 85
Target Start/End: Complemental strand, 36783411 - 36783344
Alignment:
Q  18 tataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat 85  Q
    ||||| |||| |||||||| ||||||||||||||||| | |||| || ||||||||||||||| ||||    
T  36783411 tataaactattagctgttttcataagctatattggagcaattatgaatataagctgaaaacagcttat 36783344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 174
Target Start/End: Original strand, 37795575 - 37795744
Alignment:
Q  4 ttaaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagttta-taaaaatgtcataagctg 102  Q
    ||||||| | || ||||||||||||| ||||||||||||||||| ||||  |||  || ||| ||||||||||| || |||  || || ||| |||| ||    
T  37795575 ttaaattgttttcgtataagctataaactgtttccataagctatcttgg-caatccatgaaagtaagctgaaaatagcttaggaacaacgtcgtaagttg 37795673  T
Q  103 atttaaaaagtgttcccaaatagtcttaacaaagcttatgtcagtagataagctcaaatgagtcaatccaaa 174  Q
     ||||| ||||  | ||||| |||||| ||||  ||||||||||| |||||||| |||| ||||||||||||    
T  37795674 ttttaataagtccttccaaacagtctt-acaagacttatgtcagtggataagcttaaataagtcaatccaaa 37795744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 179
Target Start/End: Original strand, 45541550 - 45541725
Alignment:
Q  4 ttaaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagctga 103  Q
    ||||||||| || ||||||||||||   | ||| |||||||||| ||||| || |||| | ||||| |||||||||| |||| || |||||||||||||     
T  45541550 ttaaattattttcgtataagctatagtttattttcataagctatcttggataacttatgagaataacctgaaaacagcttatgaacatgtcataagctgt 45541649  T
Q  104 tttaaaaagtgttcccaaatagtcttaacaaagcttatgtcagtagataagctcaaatgagtcaatccaaaaaggc 179  Q
    ||| | ||||  | | ||| |||||||  |  | ||||  || || |||||||||||| |||||||||||| ||||    
T  45541650 tttcataagttcttctaaacagtcttacaagtgtttataccattaaataagctcaaataagtcaatccaaacaggc 45541725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 175
Target Start/End: Complemental strand, 18405912 - 18405751
Alignment:
Q  14 tttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaa-tgtcataagctgatttaaaaag 112  Q
    |||||||| |||||||| ||||| |||||||||| |||||||| |||| ||| ||||||  ||| || |||| |||| |||| | | ||| ||| | |||    
T  18405912 tttgtatatgctataagttgttttcataagctatcttggagaacttatgaaattaagcttgaaaaagattatgaaaagtgtcgtgaactgttttcataag 18405813  T
Q  113 tgttcccaaatagtcttaacaaagcttatgtcagtagataagctcaaatgagtcaatccaaaa 175  Q
    |  |  |||| ||||| | |||| ||||||||||||||||||||||||| |  ||||||||||    
T  18405812 ttcttgcaaacagtctca-caaaacttatgtcagtagataagctcaaataaaccaatccaaaa 18405751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 132 - 174
Target Start/End: Complemental strand, 26990188 - 26990146
Alignment:
Q  132 caaagcttatgtcagtagataagctcaaatgagtcaatccaaa 174  Q
    |||||| ||||||||||||||||||||||| ||||||||||||    
T  26990188 caaagcctatgtcagtagataagctcaaataagtcaatccaaa 26990146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 99
Target Start/End: Complemental strand, 33405244 - 33405162
Alignment:
Q  18 tataagctataagctgtttccataagctatattggagaatttat-aaaaataagctgaaaacagtttataaaaatgtcataag 99  Q
    ||||||||||||||||||| |||||||||| ||| |||| |||| |||  ||||| ||||||||||||| || || |||||||    
T  33405244 tataagctataagctgttttcataagctatcttgaagaacttatgaaagttaagccgaaaacagtttatgaacatatcataag 33405162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 96
Target Start/End: Original strand, 41633361 - 41633431
Alignment:
Q  26 ataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcat 96  Q
    ||||||||||| ||| |||||| |||||||  |||| ||||||||||||||||| |||||| | |||||||    
T  41633361 ataagctgttttcatcagctattttggagagcttatgaaaataagctgaaaacaatttatagacatgtcat 41633431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 183
Target Start/End: Original strand, 39980727 - 39980887
Alignment:
Q  23 gctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataagctgatttaaaaagtgttcccaa 121  Q
    |||||||| |||||  |||||||||||||||||| |||| |||||||| |||||| || |||| |||   ||||||||||| ||| | ||||  ||  ||    
T  39980727 gctataagttgtttttataagctatattggagaacttatgaaaataagttgaaaaaagcttatgaaaccagtcataagctgttttcataagttctcttaa 39980826  T
Q  122 atagtcttaacaaagcttatgtcagtagataagctcaaatgagtcaatccaaaaaggcccta 183  Q
    | |||| | ||||| ||||||  ||||||||||||||||  || ||||||||| || |||||    
T  39980827 acagtc-tcacaaaacttatgctagtagataagctcaaacaagccaatccaaacagacccta 39980887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 77
Target Start/End: Original strand, 47132310 - 47132383
Alignment:
Q  4 ttaaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaa 77  Q
    ||||||| | |||||||| |||||| | |||||  |||||||||||||||||| |||| |||||||| ||||||    
T  47132310 ttaaattgtttttgtatatgctataggttgtttttataagctatattggagaagttatgaaaataagttgaaaa 47132383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 28 - 85
Target Start/End: Original strand, 48528559 - 48528616
Alignment:
Q  28 aagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat 85  Q
    ||||||||| ||||||||||  |||||| |||||| ||||||||||||||| ||||||    
T  48528559 aagctgttttcataagctattctggagagtttatagaaataagctgaaaactgtttat 48528616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 183
Target Start/End: Complemental strand, 16073005 - 16072953
Alignment:
Q  131 acaaagcttatgtcagtagataagctcaaatgagtcaatccaaaaaggcccta 183  Q
    ||||| ||||||||| ||||||||||||||| |||||||||||| ||| ||||    
T  16073005 acaaaacttatgtcattagataagctcaaataagtcaatccaaacaggtccta 16072953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 97
Target Start/End: Original strand, 20669172 - 20669244
Alignment:
Q  25 tataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcata 97  Q
    |||||||||||| |||||||||| |||||||  ||||  |||||||| |||||||| |||| || ||||||||    
T  20669172 tataagctgttttcataagctatcttggagagcttatgtaaataagcggaaaacagcttatgaacatgtcata 20669244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 102
Target Start/End: Complemental strand, 54837115 - 54837027
Alignment:
Q  14 tttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagctg 102  Q
    ||||||||| || |||| | ||| |||||||||| ||||| |  |||||||||||||| |||||||  |||| || |||||||||||||    
T  54837115 tttgtataaactgtaagttattttcataagctatcttggacagcttataaaaataagcggaaaacaagttatgaacatgtcataagctg 54837027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 14 - 61
Target Start/End: Complemental strand, 12862329 - 12862282
Alignment:
Q  14 tttgtataagctataagctgtttccataagctatattggagaatttat 61  Q
    |||||||| |||||||| ||||| ||||||||||||||||||| ||||    
T  12862329 tttgtatatgctataagttgttttcataagctatattggagaacttat 12862282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 97
Target Start/End: Complemental strand, 14548798 - 14548719
Alignment:
Q  18 tataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcata 97  Q
    ||||||||||||| ||||| |||||| |||  ||||||  ||||  |||||||||||||||||  ||| |||||||||||    
T  14548798 tataagctataagttgttttcataagttattctggagagcttatggaaataagctgaaaacagcctattaaaatgtcata 14548719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 20173849 - 20173802
Alignment:
Q  136 gcttatgtcagtagataagctcaaatgagtcaatccaaaaaggcccta 183  Q
    |||||| ||| |||||| |||||||| |||||||||||||||||||||    
T  20173849 gcttatttcaatagatacgctcaaataagtcaatccaaaaaggcccta 20173802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 85
Target Start/End: Original strand, 22343601 - 22343668
Alignment:
Q  18 tataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat 85  Q
    |||||| |||||||||||||||||||||||| || |||  ||||  |||| ||||||||| |||||||    
T  22343601 tataagttataagctgtttccataagctatactgaagagattatgcaaatgagctgaaaaaagtttat 22343668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 131 - 174
Target Start/End: Complemental strand, 25447209 - 25447166
Alignment:
Q  131 acaaagcttatgtcagtagataagctcaaatgagtcaatccaaa 174  Q
    ||||| ||||||||||||||||| ||||||| ||||||||||||    
T  25447209 acaaaacttatgtcagtagataaactcaaataagtcaatccaaa 25447166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 33883831 - 33883748
Alignment:
Q  14 tttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcata 97  Q
    ||||||| | ||||| | ||||| |||||||||| || ||||| |||| |||||||||||||||||  |||| || ||||||||    
T  33883831 tttgtatgaactatatgttgtttacataagctatcttagagaacttatgaaaataagctgaaaacaacttatgaacatgtcata 33883748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 102
Target Start/End: Complemental strand, 36631142 - 36631043
Alignment:
Q  4 ttaaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaat-gtcataagctg 102  Q
    ||||||| | |||||| | |||||||| |||||  || ||||||||||||||| |||| ||||||||| ||||| || || | ||||| |||||||||||    
T  36631142 ttaaattgtttttgtacatgctataagttgtttttatgagctatattggagaacttatgaaaataagcagaaaaaagcttttgaaaatcgtcataagctg 36631043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 25 - 76
Target Start/End: Complemental strand, 38665359 - 38665308
Alignment:
Q  25 tataagctgtttccataagctatattggagaatttataaaaataagctgaaa 76  Q
    |||||||||||||| |||||||| ||||||||||||| |||| ||| |||||    
T  38665359 tataagctgtttccttaagctatcttggagaatttatgaaaagaagttgaaa 38665308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 25447338 - 25447292
Alignment:
Q  1 aacttaaattatatttgtataagctataagctgtttccataagctat 47  Q
    |||||||||| | |||||||||||||||| |||||| ||||||||||    
T  25447338 aacttaaattgtttttgtataagctataaactgttttcataagctat 25447292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 102
Target Start/End: Complemental strand, 30923941 - 30923891
Alignment:
Q  52 gagaatttataaaaataagctgaaaacagtttataaaaatgtcataagctg 102  Q
    |||| |||||| ||||||||||||||||| ||||| | |||||||||||||    
T  30923941 gagagtttatagaaataagctgaaaacagcttatagacatgtcataagctg 30923891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 102
Target Start/End: Complemental strand, 53789539 - 53789453
Alignment:
Q  17 gtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataagctg 102  Q
    ||||| |||||||| ||||  ||||||||||  ||||||| |||| ||| ||||||||||| || |||| |||| ||||||||||||    
T  53789539 gtatatgctataagttgttatcataagctatcatggagaacttatgaaattaagctgaaaaaagcttatgaaaagtgtcataagctg 53789453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 99
Target Start/End: Original strand, 2201121 - 2201202
Alignment:
Q  18 tataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataag 99  Q
    ||||||||||||||||||| ||| |||||| ||||| | ||||   ||| |||||||||| ||||||| || || |||||||    
T  2201121 tataagctataagctgttttcattagctatcttggatagtttaaggaaaaaagctgaaaagagtttatgaacatatcataag 2201202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 102
Target Start/End: Original strand, 4401026 - 4401122
Alignment:
Q  4 ttaaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataagctg 102  Q
    ||||||||| || ||||| |||||||| |||||   |||| |||||||||||| |||| |||||||| | ||||||| ||||  ||| ||||||||||||    
T  4401026 ttaaattattttcgtatatgctataagttgttt---taagttatattggagaacttatgaaaataagttaaaaacagcttatggaaattgtcataagctg 4401122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 85
Target Start/End: Original strand, 26878096 - 26878177
Alignment:
Q  4 ttaaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat 85  Q
    ||||||| | ||||||  || |||||| ||||| ||| |||||| ||| |||||| || |||||| ||||||||||||||||    
T  26878096 ttaaattgtgtttgtacgagttataagttgttttcattagctatcttgaagaattaatgaaaatatgctgaaaacagtttat 26878177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 137 - 174
Target Start/End: Original strand, 26911703 - 26911740
Alignment:
Q  137 cttatgtcagtagataagctcaaatgagtcaatccaaa 174  Q
    ||||||||||||||||| ||||||| ||||||||||||    
T  26911703 cttatgtcagtagataaactcaaataagtcaatccaaa 26911740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 56 - 172
Target Start/End: Complemental strand, 31365227 - 31365111
Alignment:
Q  56 atttataaaaataagctgaaaacagtttataaaaat-gtcataagctgatttaaaaagtgttcccaaatagtcttaacaaagcttatgtcagtagataag 154  Q
    |||||| ||||| || |||||| || |||| ||||| ||||||||||| ||| | ||||  ||||||| ||||| | |||| |||||| || ||||||||    
T  31365227 atttatgaaaatgagttgaaaaaagcttatgaaaattgtcataagctgctttcataagttctcccaaacagtctca-caaaacttatgccaatagataag 31365129  T
Q  155 ctcaaatgagtcaatcca 172  Q
    ||||||| || |||||||    
T  31365128 ctcaaataagccaatcca 31365111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 132 - 173
Target Start/End: Complemental strand, 33405155 - 33405114
Alignment:
Q  132 caaagcttatgtcagtagataagctcaaatgagtcaatccaa 173  Q
    |||| ||||||||||||||||| ||||||| |||||||||||    
T  33405155 caaaacttatgtcagtagataaactcaaataagtcaatccaa 33405114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 36139870 - 36139955
Alignment:
Q  17 gtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagctg 102  Q
    |||||||||||||| ||||||  ||  |||| ||| |||  |||| |||||||||||||||||| || | || |||||||||||||    
T  36139870 gtataagctataagttgtttcattatactatcttgaagagcttatgaaaataagctgaaaacagcttgtgaacatgtcataagctg 36139955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 53 - 130
Target Start/End: Original strand, 47132022 - 47132099
Alignment:
Q  53 agaatttataaaaataagctgaaaacagtttataaaaatgtcataagctgatttaaaaagtgttcccaaatagtctta 130  Q
    |||| ||||||||||||||||||||||||||||  | ||| |||||| || ||| | ||||  || ||||||||||||    
T  47132022 agaacttataaaaataagctgaaaacagtttatggatatgacataagttgttttcataagttctctcaaatagtctta 47132099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 39 - 122
Target Start/End: Original strand, 901938 - 902022
Alignment:
Q  39 ataagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataagctgatttaaaaagtgttcccaaa 122  Q
    |||||||||||||||||| |||| |||||||| |||||| || ||||  ||||||| || ||||| ||| | |||| ||||||||    
T  901938 ataagctatattggagaacttatgaaaataagttgaaaaaagcttatggaaaatgttattagctgttttcataagttttcccaaa 902022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 148 - 188
Target Start/End: Complemental strand, 2100126 - 2100086
Alignment:
Q  148 agataagctcaaatgagtcaatccaaaaaggccctaggtcc 188  Q
    |||||||||||||| |||||||||||| || ||||||||||    
T  2100126 agataagctcaaataagtcaatccaaacagaccctaggtcc 2100086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 180
Target Start/End: Original strand, 22667514 - 22667558
Alignment:
Q  136 gcttatgtcagtagataagctcaaatgagtcaatccaaaaaggcc 180  Q
    |||||||||||||||||||||||||| || ||||| ||| |||||    
T  22667514 gcttatgtcagtagataagctcaaataagccaatcgaaataggcc 22667558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 180
Target Start/End: Original strand, 22724153 - 22724197
Alignment:
Q  136 gcttatgtcagtagataagctcaaatgagtcaatccaaaaaggcc 180  Q
    |||||||||||||||||||||||||| || ||||| ||| |||||    
T  22724153 gcttatgtcagtagataagctcaaataagccaatcgaaataggcc 22724197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 24887360 - 24887296
Alignment:
Q  18 tataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtt 82  Q
    ||||||||| ||||||||| ||||||||||  ||||||  ||||   ||||||||||||||||||    
T  24887360 tataagctaaaagctgttttcataagctatcctggagagcttatgggaataagctgaaaacagtt 24887296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 137 - 177
Target Start/End: Original strand, 46407618 - 46407658
Alignment:
Q  137 cttatgtcagtagataagctcaaatgagtcaatccaaaaag 177  Q
    |||||||| |||||||||||||||| || ||||||||||||    
T  46407618 cttatgtcggtagataagctcaaattagccaatccaaaaag 46407658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 49; Significance: 4e-19; HSPs: 54)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 15 - 182
Target Start/End: Complemental strand, 30251534 - 30251367
Alignment:
Q  15 ttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataagctgatttaaaaagt 113  Q
    ||||||| | |||||||||||| |||||||||| |||||  | |||| ||||||||||| ||| || |||| |||||||  |||||||| |||   ||||    
T  30251534 ttgtatatgttataagctgttttcataagctatcttggaccacttatgaaaataagctgtaaaaagcttatgaaaaatgcaataagctgttttcgtaagt 30251435  T
Q  114 gttcccaaatagtcttaacaaagcttatgtcagtagataagctcaaatgagtcaatccaaaaaggccct 182  Q
      ||||||| ||||| |  ||| ||||||||||||||||||||||||| || ||||||||| |||||||    
T  30251434 tctcccaaacagtctcacgaaa-cttatgtcagtagataagctcaaataagccaatccaaacaggccct 30251367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 17 - 80
Target Start/End: Original strand, 10114481 - 10114544
Alignment:
Q  17 gtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacag 80  Q
    |||||||||||||||||||| ||| |||||||||||||||  ||| ||||||||||||||||||    
T  10114481 gtataagctataagctgttttcattagctatattggagaacatatgaaaataagctgaaaacag 10114544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 102
Target Start/End: Original strand, 10120735 - 10120834
Alignment:
Q  4 ttaaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataagctg 102  Q
    ||||||| | || |||||| ||||||||||||| ||| | ||||||||||||| |||| ||||||||||||||||||  ||| | |||||||||||||||    
T  10120735 ttaaattgttttggtataacctataagctgtttacattaactatattggagaacttatgaaaataagctgaaaacagcatatgataaatgtcataagctg 10120834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 27028822 - 27028909
Alignment:
Q  16 tgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataagctg 102  Q
    |||||| |||||||||||||| |||||||||| |||||||  |||| ||||||||||||||| || |||| ||||||||| |||||||    
T  27028822 tgtatatgctataagctgttttcataagctatcttggagagcttatgaaaataagctgaaaatagcttatgaaaaatgtcctaagctg 27028909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 14 - 183
Target Start/End: Complemental strand, 43718018 - 43717846
Alignment:
Q  14 tttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaa-atgtc---ataagctgatttaaa 109  Q
    |||| ||||| |||||||||||| |||||||||| |||||||| |||| ||| |||||| ||||||| |||| |   |||||   |||  ||| ||| |     
T  43718018 tttggataagttataagctgtttgcataagctatcttggagaacttatgaaagtaagctaaaaacagcttatgagcgatgtcctcatagtctgttttcat 43717919  T
Q  110 aagtgttcccaaatagtcttaacaaagcttatgtcagtagataagctcaaatgagtcaatccaaaaaggcccta 183  Q
    ||||  ||||||||||||| | |||| ||||||||| ||||||||||||||| || ||||||||| ||||||||    
T  43717918 aagttctcccaaatagtctca-caaaacttatgtcaatagataagctcaaataagccaatccaaataggcccta 43717846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 79
Target Start/End: Complemental strand, 28769416 - 28769355
Alignment:
Q  18 tataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaaca 79  Q
    ||||||||||||||||||| |||||||||| ||||||| |||||  ||||||||||||||||    
T  28769416 tataagctataagctgttttcataagctattttggagagtttatggaaataagctgaaaaca 28769355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 4 - 101
Target Start/End: Complemental strand, 37353340 - 37353243
Alignment:
Q  4 ttaaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagct 101  Q
    ||||||| | ||||| || |||||||||||||| | |||||||| || ||||  |||| ||||||| ||||||||||||||| || ||||||||||||    
T  37353340 ttaaattgtttttgtgtatgctataagctgttttcttaagctatctttgagagcttatgaaaataatctgaaaacagtttatgaatatgtcataagct 37353243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 6 - 102
Target Start/End: Complemental strand, 6509392 - 6509296
Alignment:
Q  6 aaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagctg 102  Q
    ||||| ||||| ||||||||||||||||||| ||||||||||  ||||||  ||||  ||||||| |||||| ||||||||   |||||||||||||    
T  6509392 aaattgtatttatataagctataagctgttttcataagctatcctggagagcttattgaaataaggtgaaaatagtttataggcatgtcataagctg 6509296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 174
Target Start/End: Original strand, 11376696 - 11376852
Alignment:
Q  18 tataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagctgatttaaaaagtgttc 117  Q
    ||||||||||||| || || | |||||||| || |||||| ||| |||||||||||||||||   ||| || |||||| |||||  ||| | ||||  ||    
T  11376696 tataagctataagatgctttcttaagctattttagagaatctatgaaaataagctgaaaacaagatattaacatgtcacaagctattttcataagttctc 11376795  T
Q  118 ccaaatagtcttaacaaagcttatgtcagtagataagctcaaatgagtcaatccaaa 174  Q
    ||||||||||| |  | | ||||| ||||||||||||||||||| || |||| ||||    
T  11376796 ccaaatagtctcacaagaacttatatcagtagataagctcaaataagccaattcaaa 11376852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 26 - 113
Target Start/End: Complemental strand, 31716296 - 31716208
Alignment:
Q  26 ataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataagctgatttaaaaagt 113  Q
    ||||| ||| |||||||||||| |||||||| ||||| |||||||||||||| || |||| || |||||||||||||| ||| ||||||    
T  31716296 ataagatgtatccataagctatcttggagaagttatagaaataagctgaaaaaagcttatgaagaatgtcataagctgttttcaaaagt 31716208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 25 - 154
Target Start/End: Original strand, 1930035 - 1930164
Alignment:
Q  25 tataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataagctgatttaaaaagtgttcccaaat 123  Q
    |||||||||||| |||||||||| |||| ||  || | |||||||||||||||||| |||| || |||||||||| ||| ||| | ||||  ||||||||    
T  1930035 tataagctgttttcataagctatcttggtgaccttgtgaaaataagctgaaaacagcttatgaacaatgtcataaactgttttcacaagttctcccaaat 1930134  T
Q  124 agtcttaacaaagcttatgtcagtagataag 154  Q
    | |  | ||||| ||||||||||||||||||    
T  1930135 aat-gtcacaaaacttatgtcagtagataag 1930164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 26771241 - 26771398
Alignment:
Q  1 aacttaaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaat-gtcataag 99  Q
    |||||||||| | |||||||| |||||||||| |||  ||||| |||||| ||||| |||| |||||||| ||||||  | || | ||||| ||||||||    
T  26771241 aacttaaattgtttttgtatatgctataagctttttttataagatatattagagaacttatgaaaataagttgaaaaaggcttttgaaaattgtcataag 26771340  T
Q  100 ctgatttaaaaagtgttcccaaatagtcttaacaaagcttatgtcagtagataagctca 158  Q
    ||| ||| | ||||  ||||||| ||||| | |||| |||||| | |||||||||||||    
T  26771341 ctgttttcataagttctcccaaacagtctca-caaaacttatgcccgtagataagctca 26771398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 32 - 181
Target Start/End: Complemental strand, 35534676 - 35534527
Alignment:
Q  32 tgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaat-gtcataagctgatttaaaaagtgttcccaaatagtctta 130  Q
    ||||| |||||| |||||||||||| |||| ||| ||||| ||||| || || | ||||| ||||||||||| ||| | ||||  || |||| ||||| |    
T  35534676 tgttttcataagttatattggagaacttatgaaagtaagccgaaaaaagcttgttaaaattgtcataagctgttttcacaagttctctcaaacagtctca 35534577  T
Q  131 acaaagcttatgtcagtagataagctcaaatgagtcaatccaaaaaggccc 181  Q
     |||| ||||||| ||||||||||||||||| ||||| || ||| ||||||    
T  35534576 -caaaacttatgttagtagataagctcaaataagtcattctaaacaggccc 35534527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 131 - 181
Target Start/End: Original strand, 38602433 - 38602483
Alignment:
Q  131 acaaagcttatgtcagtagataagctcaaatgagtcaatccaaaaaggccc 181  Q
    ||||| ||||||||||||||||||||||||| |||||||||||| ||||||    
T  38602433 acaaaacttatgtcagtagataagctcaaataagtcaatccaaacaggccc 38602483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 79
Target Start/End: Original strand, 8062318 - 8062383
Alignment:
Q  14 tttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaaca 79  Q
    ||||||||||||||||||||||| |||||||||| || ||||  ||||  ||||||||||||||||    
T  8062318 tttgtataagctataagctgttttcataagctatcttagagagattatggaaataagctgaaaaca 8062383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 85
Target Start/End: Original strand, 2482854 - 2482923
Alignment:
Q  14 tttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat 85  Q
    ||||||||||||||||||||||| |||  ||||| ||||| || ||||| ||||||||||||||||| ||||    
T  2482854 tttgtataagctataagctgttttcat--gctatcttggataacttatagaaataagctgaaaacagcttat 2482923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 22 - 98
Target Start/End: Original strand, 7514810 - 7514885
Alignment:
Q  22 agctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataa 98  Q
    |||||||||||||||| |||||||||||||||||  ||||| ||||||| |||||| | |||||||| || ||||||    
T  7514810 agctataagctgtttcgataagctatattggagagcttatagaaataagttgaaaa-aatttataaacatatcataa 7514885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 29168146 - 29168023
Alignment:
Q  6 aaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctga-aaacagtttat-aaaaatgtcataagctga 103  Q
    ||||||| |||||||| |||||||||||||| | | |||||| |||||||| ||||  ||||||||||| ||||| ||||| ||||||||||||| |||     
T  29168146 aaattatttttgtatatgctataagctgttttcctgagctatcttggagaacttatggaaataagctgagaaaca-tttatgaaaaatgtcataatctgt 29168048  T
Q  104 tttaaaaagtgttcccaaatagtct 128  Q
    ||| | ||||  ||||||| |||||    
T  29168047 ttttataagttctcccaaacagtct 29168023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 61
Target Start/End: Complemental strand, 32841389 - 32841342
Alignment:
Q  14 tttgtataagctataagctgtttccataagctatattggagaatttat 61  Q
    ||||||||||||||||||||||| |||||||||| |||||||| ||||    
T  32841389 tttgtataagctataagctgttttcataagctatcttggagaagttat 32841342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 85
Target Start/End: Complemental strand, 33714317 - 33714246
Alignment:
Q  14 tttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat 85  Q
    |||||| || ||||||||| ||| |||||||||| | |||||  ||||||||||||||||||||||| ||||    
T  33714317 tttgtacaatctataagctattttcataagctatctgggagagcttataaaaataagctgaaaacagcttat 33714246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 88
Target Start/End: Original strand, 43504747 - 43504814
Alignment:
Q  21 aagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaa 88  Q
    |||||||||| |||||  ||||||||| |||||||| ||||  ||||||||||||||||| |||||||    
T  43504747 aagctataagatgtttttataagctatcttggagaacttatggaaataagctgaaaacagcttataaa 43504814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 80
Target Start/End: Original strand, 38602322 - 38602388
Alignment:
Q  14 tttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacag 80  Q
    |||| ||| ||||||||||||||  |||||||||| |||||||||| | ||||||||| ||||||||    
T  38602322 tttgcatatgctataagctgtttttataagctatactggagaatttgtgaaaataagccgaaaacag 38602388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 24 - 98
Target Start/End: Complemental strand, 41442524 - 41442450
Alignment:
Q  24 ctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataa 98  Q
    ||||||||||||| |||||||||||||||| || ||||| |  ||||||||||||||  ||| || |||||||||    
T  41442524 ctataagctgttttcataagctatattggaaaacttatataggtaagctgaaaacagcatatgaacatgtcataa 41442450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 99
Target Start/End: Original strand, 14905613 - 14905686
Alignment:
Q  26 ataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataag 99  Q
    |||| |||||| ||| |||||| ||||||||||||| |||| |||||| |||||  ||||||| ||||||||||    
T  14905613 ataaactgttttcattagctatcttggagaatttatgaaaacaagctgtaaacatcttataaacatgtcataag 14905686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 14 - 106
Target Start/End: Original strand, 18133645 - 18133738
Alignment:
Q  14 tttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataagctgattt 106  Q
    ||||||||  |||||||||| ||  |||| ||||||||||||| |||| ||||||||||||||| || || | |||| ||| ||||||||||||    
T  18133645 tttgtatatcctataagctggttttataaactatattggagaacttatgaaaataagctgaaaaaagcttgtgaaaattgttataagctgattt 18133738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 80
Target Start/End: Original strand, 27049349 - 27049421
Alignment:
Q  7 aattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacag 80  Q
    |||||| || ||||||||||||| || ||| |||||||||| |||||||| |||| |||||||| |||||||||    
T  27049349 aattattttcgtataagctataaacttttttcataagctat-ttggagaaattatgaaaataagatgaaaacag 27049421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 79
Target Start/End: Original strand, 33912126 - 33912187
Alignment:
Q  18 tataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaaca 79  Q
    |||||| |||||| ||||| ||||||| |||||| ||| |||||||| ||||||||||||||    
T  33912126 tataagttataagttgtttacataagccatattgcagagtttataaagataagctgaaaaca 33912187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 161
Target Start/End: Complemental strand, 1058122 - 1058011
Alignment:
Q  49 ttggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagctgatttaaaaagtgttcccaaatagtcttaacaaagcttatgtcagta 148  Q
    |||||||| |||| ||||||||| ||||| | |    ||||||||||||||| | ||| ||||||  ||||||| ||||| | |||| ||||||| ||||    
T  1058122 ttggagaacttatgaaaataagcggaaaaaactaatgaaaaatgtcataagcagttttcaaaagttctcccaaacagtctca-caaaacttatgtaagta 1058024  T
Q  149 gataagctcaaat 161  Q
    |||||||||||||    
T  1058023 gataagctcaaat 1058011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 9956891 - 9956831
Alignment:
Q  18 tataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaac 78  Q
    |||||| |||||| ||||| ||||| |||| |||||||| |||| ||||||||||||||||    
T  9956891 tataagttataagttgttttcataatctatcttggagaacttatgaaaataagctgaaaac 9956831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 102
Target Start/End: Original strand, 13459678 - 13459722
Alignment:
Q  58 ttataaaaataagctgaaaacagtttataaaaatgtcataagctg 102  Q
    |||| |||||| |||||||||||||||| ||||||||||||||||    
T  13459678 ttatgaaaataggctgaaaacagtttatgaaaatgtcataagctg 13459722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 79
Target Start/End: Original strand, 31916618 - 31916658
Alignment:
Q  39 ataagctatattggagaatttataaaaataagctgaaaaca 79  Q
    ||||||||| |||||||||||||||||||||||| ||||||    
T  31916618 ataagctatcttggagaatttataaaaataagctaaaaaca 31916658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 39 - 181
Target Start/End: Complemental strand, 3537001 - 3536859
Alignment:
Q  39 ataagctatattggagaatttataaaaataagctgaaaacagtttataaa-aatgtcataagctgatttaaaaagtgttcccaaatagtcttaacaaagc 137  Q
    ||||| ||| |||||||| ||||  |||||||||||||||| ||||| || |||||||||||||| ||    || |  || | |||||||  | ||||||    
T  3537001 ataagatatcttggagaacttatggaaataagctgaaaacaatttatgaacaatgtcataagctgtttctgtaaattctctcgaatagtcaca-caaagc 3536903  T
Q  138 ttatgtcagtagataagctcaaatgagtcaatccaaaaaggccc 181  Q
    ||||| |||||||||||||||||| || ||||| ||| ||||||    
T  3536902 ttatgccagtagataagctcaaataagacaatctaaataggccc 3536859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 24558832 - 24558883
Alignment:
Q  4 ttaaattatatttgtataagctataagctgtttccataagctatattggaga 55  Q
    ||||||||| || |||||||||||||| ||||| |||||||||| |||||||    
T  24558832 ttaaattattttcgtataagctataagttgttttcataagctatcttggaga 24558883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 101
Target Start/End: Original strand, 30389092 - 30389175
Alignment:
Q  18 tataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagct 101  Q
    ||||||||||| ||||||| |||||||| |  | ||||| |||| |||||||||||||||||  |||| || ||||||| ||||    
T  30389092 tataagctatacgctgttttcataagctttcctagagaacttatgaaaataagctgaaaacaacttatgaacatgtcattagct 30389175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 85
Target Start/End: Original strand, 31705078 - 31705145
Alignment:
Q  18 tataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat 85  Q
    ||||||||||||||||||| |||||||| |  | |||| |||||  ||||||||||||||||| ||||    
T  31705078 tataagctataagctgttttcataagctgtccttgagagtttatggaaataagctgaaaacagcttat 31705145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 174
Target Start/End: Original strand, 4560613 - 4560651
Alignment:
Q  136 gcttatgtcagtagataagctcaaatgagtcaatccaaa 174  Q
    |||||||||| ||||||||||||||| ||||||||||||    
T  4560613 gcttatgtcaatagataagctcaaataagtcaatccaaa 4560651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 100
Target Start/End: Original strand, 11795085 - 11795167
Alignment:
Q  18 tataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagc 100  Q
    |||||| ||||||||| || ||||||||||  ||||||  ||||  ||||||||||||||||| ||||  | |||||||||||    
T  11795085 tataagttataagctgatttcataagctattatggagagcttatggaaataagctgaaaacaggttatggacatgtcataagc 11795167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 70
Target Start/End: Original strand, 15180520 - 15180586
Alignment:
Q  4 ttaaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataag 70  Q
    ||||||||| |||||| | | |||||| |||||| |||||||||||||||||| || | ||||||||    
T  15180520 ttaaattatttttgtaaatgttataagttgtttctataagctatattggagaacttctgaaaataag 15180586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 30013211 - 30013277
Alignment:
Q  18 tataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagttta 84  Q
    ||||||||||||||||||| ||||||||||  || |||| | ||  |||||||||||||| ||||||    
T  30013211 tataagctataagctgttttcataagctatcctgtagaactaatggaaataagctgaaaatagttta 30013277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 51
Target Start/End: Original strand, 31891879 - 31891917
Alignment:
Q  13 atttgtataagctataagctgtttccataagctatattg 51  Q
    |||||||||||||||||| ||||| ||||||||||||||    
T  31891879 atttgtataagctataagttgttttcataagctatattg 31891917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 98
Target Start/End: Original strand, 34849086 - 34849176
Alignment:
Q  8 attatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataa 98  Q
    ||||| |||||||||| |||||||||||  |||||||| | ||| |||| ||||  |||| |||||||||| | |||| || |||||||||    
T  34849086 attatttttgtataagatataagctgttatcataagctttcttgtagaacttatggaaatcagctgaaaacggcttatgaacatgtcataa 34849176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 77
Target Start/End: Complemental strand, 44236887 - 44236841
Alignment:
Q  31 ctgtttccataagctatattggagaatttataaaaataagctgaaaa 77  Q
    |||||| ||||||||||||||||||  |||| |||||||||||||||    
T  44236887 ctgttttcataagctatattggagagcttatgaaaataagctgaaaa 44236841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 99
Target Start/End: Complemental strand, 3161660 - 3161619
Alignment:
Q  58 ttataaaaataagctgaaaacagtttataaaaatgtcataag 99  Q
    |||||||||||||||||||||| ||||| || ||||||||||    
T  3161660 ttataaaaataagctgaaaacattttatgaacatgtcataag 3161619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 135 - 176
Target Start/End: Original strand, 11183653 - 11183694
Alignment:
Q  135 agcttatgtcagtagataagctcaaatgagtcaatccaaaaa 176  Q
    ||||| ||||||||||||||||||||| || |||||||||||    
T  11183653 agcttttgtcagtagataagctcaaataagccaatccaaaaa 11183694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 25 - 102
Target Start/End: Complemental strand, 11569527 - 11569450
Alignment:
Q  25 tataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagctg 102  Q
    |||||||||||| ||||||||||  ||||||  || | |||||||||||||||||  ||||  | |||||||||||||    
T  11569527 tataagctgttttcataagctatcatggagagattttgaaaataagctgaaaacaacttatgtacatgtcataagctg 11569450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 39 - 100
Target Start/End: Original strand, 20672764 - 20672825
Alignment:
Q  39 ataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagc 100  Q
    |||||||||  ||||||  |||| |||||||||||||||||| |||| || |||||||||||    
T  20672764 ataagctatcctggagagcttatgaaaataagctgaaaacagcttatgaacatgtcataagc 20672825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 15 - 80
Target Start/End: Complemental strand, 36338342 - 36338277
Alignment:
Q  15 ttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacag 80  Q
    ||||||||| ||||||||||||  ||||  ||| || ||||| |||| ||||||||||||||||||    
T  36338342 ttgtataagatataagctgtttttataaaatatctttgagaacttatgaaaataagctgaaaacag 36338277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 174
Target Start/End: Original strand, 2606162 - 2606198
Alignment:
Q  138 ttatgtcagtagataagctcaaatgagtcaatccaaa 174  Q
    |||||||||||||||||||| ||| ||||||||||||    
T  2606162 ttatgtcagtagataagctcgaataagtcaatccaaa 2606198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 102
Target Start/End: Complemental strand, 7878555 - 7878519
Alignment:
Q  66 ataagctgaaaacagtttataaaaatgtcataagctg 102  Q
    ||||||||||||||||||||| | |||||||||||||    
T  7878555 ataagctgaaaacagtttatagacatgtcataagctg 7878519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 128
Target Start/End: Original strand, 27754403 - 27754507
Alignment:
Q  24 ctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagctgatttaaaaagtgttcccaaat 123  Q
    |||||||  |||| |||||||||| |||||||  |||| |||||||||||||  ||  ||||||  ||||||||| ||| ||| | ||||  ||||||||    
T  27754403 ctataagtggttttcataagctattttggagagcttatgaaaataagctgaacgcaacttataatcatgtcataaactgttttcataagttctcccaaat 27754502  T
Q  124 agtct 128  Q
    |||||    
T  27754503 agtct 27754507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 85
Target Start/End: Original strand, 31862485 - 31862553
Alignment:
Q  17 gtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat 85  Q
    |||||||||||||| ||||| |||||| |||  | ||||  |||| |||||||||||||||||| ||||    
T  31862485 gtataagctataagatgttttcataagttatcctagagagcttatgaaaataagctgaaaacagcttat 31862553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 31884587 - 31884650
Alignment:
Q  18 tataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtt 82  Q
    ||||||||||||  ||||| ||||||||||  |||||| |||| | |||||||||||||||||||    
T  31884587 tataagctataaattgttttcataagctatcatggagagttta-ataaataagctgaaaacagtt 31884650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 183
Target Start/End: Complemental strand, 35644039 - 35643900
Alignment:
Q  44 ctatattggagaatttataaaaataagctgaaaacagtttataaaaat-gtcataagctgatttaaaaagtgttcccaaatagtcttaacaaagcttatg 142  Q
    ||||||||||||  |||| |||||||| |||||| || |||| ||||| ||||||| ||  ||| | ||||  ||||||| ||||| | ||||  |||||    
T  35644039 ctatattggagagcttatgaaaataagttgaaaaaagcttatgaaaattgtcataaactattttcataagttatcccaaacagtctca-caaaaattatg 35643941  T
Q  143 tcagtagataagctcaaatgagtcaatccaaaaaggcccta 183  Q
     |||||||||||| ||||| || |||||| || ||||||||    
T  35643940 ccagtagataagcccaaataagccaatcccaacaggcccta 35643900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 102
Target Start/End: Complemental strand, 42215387 - 42215299
Alignment:
Q  14 tttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagctg 102  Q
    ||||||||| |||||| || ||| |||| |||||  ||||||  ||||  ||||||||||||||||| |||| || | |||||||||||    
T  42215387 tttgtataatctataacctattttcatatgctatcctggagagcttatgtaaataagctgaaaacagcttatgaacaagtcataagctg 42215299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 7e-18; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 20 - 102
Target Start/End: Original strand, 31624085 - 31624167
Alignment:
Q  20 taagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagctg 102  Q
    ||||||||||||||||| |||| ||||| |||||||| |||| |||||||| ||||||||| |||| || |||||||||||||    
T  31624085 taagctataagctgttttcataggctatcttggagaaattatgaaaataagttgaaaacagcttatgaacatgtcataagctg 31624167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 4 - 100
Target Start/End: Original strand, 2735048 - 2735145
Alignment:
Q  4 ttaaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataagc 100  Q
    ||||||||| ||||||||| ||||||||||||| ||||||| || ||| | || |||| ||||||||| |||||||| |||| |||||||||||||||    
T  2735048 ttaaattatttttgtataatctataagctgttttcataagcaatcttgaacaacttatgaaaataagccgaaaacagcttatgaaaaatgtcataagc 2735145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 14 - 149
Target Start/End: Complemental strand, 20368261 - 20368127
Alignment:
Q  14 tttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagctgatttaaaaagt 113  Q
    ||||||| || |||||| ||||| |||||||| | |||||||| |||| |||||||| |||||  || |||| || |||||||||| || ||| | ||||    
T  20368261 tttgtatgagttataagttgttttcataagctttcttggagaacttatgaaaataagttgaaactagcttatgaacatgtcataagttgttttcataagt 20368162  T
Q  114 gttcccaaatagtcttaacaaagcttatgtcagtag 149  Q
      |||||||||||||| ||||| |||||||||||||    
T  20368161 tctcccaaatagtctt-acaaaacttatgtcagtag 20368127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 101
Target Start/End: Complemental strand, 9093647 - 9093549
Alignment:
Q  4 ttaaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagttta-taaaaatgtcataagct 101  Q
    ||||||| | || |||||||||||||||||||| |||||||| | || ||||| |||  |||||||||||||||||| ||| ||| |||||||||||||    
T  9093647 ttaaattgttttcgtataagctataagctgttttcataagctgtcttagagaacttaagaaaataagctgaaaacaggttattaacaatgtcataagct 9093549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 14 - 102
Target Start/End: Complemental strand, 34430542 - 34430453
Alignment:
Q  14 tttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataagctg 102  Q
    |||||||| | |||||| ||||| |||||||||| |||||||| |||| ||||||||||||||| || |||| | |||||||||||||||    
T  34430542 tttgtatatgttataaggtgttttcataagctatcttggagaagttatgaaaataagctgaaaaaagcttatgataaatgtcataagctg 34430453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 91
Target Start/End: Original strand, 6536604 - 6536681
Alignment:
Q  14 tttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaat 91  Q
    |||||||| |||||||| |||||  | ||||||||||||||||||||| |||||||| |||||| || |||| |||||    
T  6536604 tttgtatatgctataagttgtttttagaagctatattggagaatttatgaaaataagttgaaaaaagcttatgaaaat 6536681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 23 - 79
Target Start/End: Complemental strand, 835321 - 835265
Alignment:
Q  23 gctataagctgtttccataagctatattggagaatttataaaaataagctgaaaaca 79  Q
    ||||||||| |||| |||||||||| |||||||| |||| |||||||||||||||||    
T  835321 gctataagcagttttcataagctatcttggagaacttatgaaaataagctgaaaaca 835265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 11784121 - 11784069
Alignment:
Q  4 ttaaattatatttgtataagctataagctgtttccataagctatattggagaa 56  Q
    ||||||| | |||||||| |||||||||||||| |||||||||||||||||||    
T  11784121 ttaaattgtttttgtatatgctataagctgttttcataagctatattggagaa 11784069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 106
Target Start/End: Complemental strand, 14926871 - 14926779
Alignment:
Q  14 tttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagctgattt 106  Q
    |||||||| | ||||||||||||||| ||||||| ||||| |  ||||||||||||| | |||  ||||||| ||| ||||||||| ||||||    
T  14926871 tttgtatatgttataagctgtttccaaaagctatcttggacagcttataaaaataagtttaaataagtttatgaaactgtcataagttgattt 14926779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 174
Target Start/End: Original strand, 24982696 - 24982854
Alignment:
Q  16 tgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagttta-taaaaatgtcataagctgatttaaaaagtg 114  Q
    |||||| |||||||||||||| |||||| ||| |||||||| |||| |   |||||| |||| || | | |||||||||||||||||| | | ||| ||     
T  24982696 tgtatatgctataagctgttttcataagttattttggagaacttatgagggtaagctaaaaaaagctcattaaaaatgtcataagctgttctcaaatgtt 24982795  T
Q  115 ttcccaaatagtcttaacaaagcttatgtcagtagataagctcaaatgagtcaatccaaa 174  Q
     ||| ||| |||| | ||||| ||||||| |||||||||| || ||| ||||||||||||    
T  24982796 ctccaaaacagtc-tcacaaaacttatgttagtagataagatctaattagtcaatccaaa 24982854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 99
Target Start/End: Complemental strand, 10616790 - 10616709
Alignment:
Q  17 gtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataag 99  Q
    ||||||||||||||||||||   |||| ||| || ||| |||||||||||||| |||||||||| |||| || ||||||||||    
T  10616790 gtataagctataagctgttttt-taagttatcttagaggatttataaaaataaactgaaaacagcttatgaacatgtcataag 10616709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 97
Target Start/End: Original strand, 415283 - 415376
Alignment:
Q  4 ttaaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcata 97  Q
    ||||||| | || |||||||||||||| |||||  |||||||||| ||||||| ||||  ||  ||||||||||||| |||| || ||||||||    
T  415283 ttaaattgttttcgtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaacagattatgaacatgtcata 415376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 25 - 161
Target Start/End: Original strand, 2455259 - 2455395
Alignment:
Q  25 tataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaa-aatgtcataagctgatttaaaaagtgttcccaaat 123  Q
    |||||||||||| |||| || || |||||||| || | |||||||||||||||||  ||||||| ||||| ||||| || ||| | ||||  || |||||    
T  2455259 tataagctgttttcatatgcaatcttggagaagttgtgaaaataagctgaaaacaacttataaacaatgtaataagttgttttcataagttctctcaaat 2455358  T
Q  124 agtcttaacaaagcttatgtcagtagataagctcaaat 161  Q
    ||| || || || |||||||  ||||||||||||||||    
T  2455359 agt-ttcaccaaacttatgtttgtagataagctcaaat 2455395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 102
Target Start/End: Complemental strand, 2027483 - 2027399
Alignment:
Q  18 tataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagctg 102  Q
    ||||| ||||||||||||  |||||||||   || ||| |||| | ||||||||||||||||| ||||  |||||||||||||||    
T  2027483 tataacctataagctgttctcataagctagcatgtagagtttaaataaataagctgaaaacagcttatggaaatgtcataagctg 2027399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 183
Target Start/End: Complemental strand, 21405118 - 21405066
Alignment:
Q  131 acaaagcttatgtcagtagataagctcaaatgagtcaatccaaaaaggcccta 183  Q
    ||||| |||||||||||| |||||||||||| |||||||||||| || |||||    
T  21405118 acaaaacttatgtcagtatataagctcaaataagtcaatccaaacagacccta 21405066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 80
Target Start/End: Complemental strand, 31624996 - 31624956
Alignment:
Q  40 taagctatattggagaatttataaaaataagctgaaaacag 80  Q
    ||||||||||||||||| |||| ||||||||||||||||||    
T  31624996 taagctatattggagaacttatgaaaataagctgaaaacag 31624956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 85
Target Start/End: Original strand, 4246403 - 4246470
Alignment:
Q  18 tataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat 85  Q
    ||||| ||||||||||||| ||||||||||  ||||||   |||||||||||| ||||||||| ||||    
T  4246403 tataatctataagctgttttcataagctattatggagagcatataaaaataagttgaaaacagcttat 4246470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 75
Target Start/End: Complemental strand, 6909963 - 6909892
Alignment:
Q  4 ttaaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaa 75  Q
    ||||||| | |||||||| |||||||| ||||| |||||  ||| ||||||||||||| ||| |||||||||    
T  6909963 ttaaattgtttttgtatatgctataagttgttttcataacatatcttggagaatttatgaaattaagctgaa 6909892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 53
Target Start/End: Original strand, 9604830 - 9604877
Alignment:
Q  6 aaattatatttgtataagctataagctgtttccataagctatattgga 53  Q
    ||||||| ||||||||||||||||||||||| |||||| ||| |||||    
T  9604830 aaattatttttgtataagctataagctgttttcataagttattttgga 9604877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 44 - 102
Target Start/End: Complemental strand, 9912242 - 9912183
Alignment:
Q  44 ctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataagctg 102  Q
    ||||||||||||| |||| |||||||||| ||||||| |||| || ||||||||||||||    
T  9912242 ctatattggagaacttatgaaaataagctcaaaacagcttatgaacaatgtcataagctg 9912183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 131 - 182
Target Start/End: Complemental strand, 35069576 - 35069525
Alignment:
Q  131 acaaagcttatgtcagtagataagctcaaatgagtcaatccaaaaaggccct 182  Q
    ||||| ||||||||||||||||||||||||| || |||| |||| |||||||    
T  35069576 acaaaacttatgtcagtagataagctcaaataagccaatacaaacaggccct 35069525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 8365053 - 8364975
Alignment:
Q  18 tataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcat 96  Q
    |||||| ||||| |||||| ||||||||||  ||| ||| | || |||||||||||||||||| || |||| |||||||    
T  8365053 tataagttataaactgttttcataagctatcatggtgaactgatgaaaataagctgaaaacagcttgtaaacatgtcat 8364975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 283087 - 283172
Alignment:
Q  17 gtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagctg 102  Q
    ||||||||||||| |||||| |||| ||||| || |  |  ||||| |||||||||||||| |||||||  | |||||||||||||    
T  283087 gtataagctataatctgtttgcataggctatcttcggaagcttatagaaataagctgaaaatagtttatggacatgtcataagctg 283172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 20 - 77
Target Start/End: Complemental strand, 837291 - 837234
Alignment:
Q  20 taagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaa 77  Q
    |||||||||||  |||| ||| |||||| |||||||| |||| |||||||||||||||    
T  837291 taagctataagtagttttcattagctatcttggagaacttatgaaaataagctgaaaa 837234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 99
Target Start/End: Original strand, 1402989 - 1403070
Alignment:
Q  18 tataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataag 99  Q
    ||||||||||||  ||||| ||||||||||  ||||||  ||||| |||| ||||||| | |||||||| | ||||||||||    
T  1402989 tataagctataaattgttttcataagctatcatggagatcttatagaaattagctgaatatagtttatagatatgtcataag 1403070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 14 - 79
Target Start/End: Complemental strand, 9109332 - 9109267
Alignment:
Q  14 tttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaaca 79  Q
    ||||||||||||||||||||||| ||| | |||  ||||||||  ||| |||||||| ||||||||    
T  9109332 tttgtataagctataagctgttttcattaactaatttggagaacctatgaaaataaggtgaaaaca 9109267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 59
Target Start/End: Original strand, 10016538 - 10016579
Alignment:
Q  18 tataagctataagctgtttccataagctatattggagaattt 59  Q
    ||||||| ||||||||||| |||||||||| |||||||||||    
T  10016538 tataagccataagctgttttcataagctatgttggagaattt 10016579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 136 - 181
Target Start/End: Original strand, 12111078 - 12111123
Alignment:
Q  136 gcttatgtcagtagataagctcaaatgagtcaatccaaaaaggccc 181  Q
    |||||||  ||||||||||||||||| |||||||||||| ||||||    
T  12111078 gcttatgctagtagataagctcaaataagtcaatccaaataggccc 12111123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 35 - 155
Target Start/End: Original strand, 31813171 - 31813291
Alignment:
Q  35 ttccataagctatattggagaatttataaaaataagctgaaaacagtttat-aaaaatgtcataagctgatttaaaaagtgttcccaaatagtcttaaca 133  Q
    ||||||||||||| ||||||||  ||| |||||||||||||||| | |||| || ||| ||||||||   ||| | ||||  |||||||||||| | |||    
T  31813171 ttccataagctatcttggagaacatatgaaaataagctgaaaacggcttatgaacaatctcataagcaattttcataagttctcccaaatagtc-tcaca 31813269  T
Q  134 aagcttatgtcagtagataagc 155  Q
    || |||||| ||||| ||||||    
T  31813270 aaacttatgccagtaaataagc 31813291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 59
Target Start/End: Complemental strand, 33075034 - 33074993
Alignment:
Q  18 tataagctataagctgtttccataagctatattggagaattt 59  Q
    ||||||| ||||||||||| |||||||||| |||||||||||    
T  33075034 tataagcaataagctgttttcataagctattttggagaattt 33074993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 101
Target Start/End: Original strand, 6647387 - 6647463
Alignment:
Q  25 tataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagct 101  Q
    ||||| |||||| |||||||||| || ||||  |||| |||||||| ||||||||  |||| || ||||||||||||    
T  6647387 tataatctgttttcataagctatcttagagagcttatgaaaataagttgaaaacatcttatgaacatgtcataagct 6647463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 77
Target Start/End: Complemental strand, 19800518 - 19800454
Alignment:
Q  13 atttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaa 77  Q
    |||||||||||||||||| | ||| ||||||||||  | || || |||| |||||||||||||||    
T  19800518 atttgtataagctataagttttttacataagctatcctagaaaaattatgaaaataagctgaaaa 19800454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 39 - 79
Target Start/End: Complemental strand, 29754155 - 29754115
Alignment:
Q  39 ataagctatattggagaatttataaaaataagctgaaaaca 79  Q
    |||| ||||||||||||| ||||||||||||| ||||||||    
T  29754155 ataaactatattggagaacttataaaaataagttgaaaaca 29754115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 137 - 181
Target Start/End: Complemental strand, 30536923 - 30536879
Alignment:
Q  137 cttatgtcagtagataagctcaaatgagtcaatccaaaaaggccc 181  Q
    ||||||| ||||||||| ||||||| |||||||||||| ||||||    
T  30536923 cttatgtaagtagataaactcaaataagtcaatccaaacaggccc 30536879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 102
Target Start/End: Original strand, 34939757 - 34939821
Alignment:
Q  38 cataagctatattggagaatttataaaaataagctgaaaacagtttataaaaatgtcataagctg 102  Q
    ||||||||||  |||||| |||||  |||||||||||||||| |||||  | |||||||||||||    
T  34939757 cataagctatcctggagagtttatggaaataagctgaaaacaatttatggacatgtcataagctg 34939821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 102
Target Start/End: Original strand, 22210 - 22309
Alignment:
Q  4 ttaaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagttta-taaaaatgtcataagctg 102  Q
    ||||||||| ||||||||  ||||||||||||  |||||||||| ||||| || |||| ||||||||||||||| || |||  |||| ||||||||||||    
T  22210 ttaaattatctttgtatatactataagctgttatcataagctatgttggaaaacttatgaaaataagctgaaaaaagcttacgaaaattgtcataagctg 22309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 25 - 85
Target Start/End: Complemental strand, 21355 - 21296
Alignment:
Q  25 tataagctgtttccataagctatattggagaatttataaaaataagctgaaaacagtttat 85  Q
    |||||||||||| ||||||||||||||||||| |||| ||||||| || ||||||||||||    
T  21355 tataagctgttttcataagctatattggagaaattatgaaaataaact-aaaacagtttat 21296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 78
Target Start/End: Complemental strand, 178416 - 178342
Alignment:
Q  4 ttaaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaataagctgaaaac 78  Q
    |||||||||  | ||||||||||| |||||||| || |||| || || ||||| |||| ||||||||||||||||    
T  178416 ttaaattattgtcgtataagctattagctgttttcacaagccatctttgagaacttatgaaaataagctgaaaac 178342  T

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