View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19165_high_13 (Length: 349)
Name: NF19165_high_13
Description: NF19165
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19165_high_13 |
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Alignment Details
Target: chr7 (Bit Score: 299; Significance: 1e-168; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 299; E-Value: 1e-168
Query Start/End: Original strand, 15 - 333
Target Start/End: Complemental strand, 49006875 - 49006557
Alignment:
| Q |
15 |
actgtcaattaaaccaatgatgacgttttttccatattgtgttgtaggccatgttccgaaaacaggattgaggccaatgaagtgaggtgagtgcgttgtg |
114 |
Q |
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| T |
49006875 |
actgtcaattaaaccaatgatgatgttttttccatattgtgttgtaggccatgttccgaaaacaggattgaggccaatgaagtgaggtgagtgtgttgtg |
49006776 |
T |
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| Q |
115 |
tctggtttgataggtaaatcccttatggatgaaatatatccgggagtggttttcagagctttaagctctaaaggagacaaacttgcgctgaaaccattca |
214 |
Q |
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| T |
49006775 |
tctggtttgataggtaaatcccttatggatgaaatatatccgggagtggttttcagagcttcaagctttaaaggagacaaacttgcgctgaaaccattca |
49006676 |
T |
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| Q |
215 |
tgacattagtgtaggtatatgtgagttttggagaaaatatatagttcaactggtcgttgttagaagtaatgtcaagtagtgaggaaagggtggctaagta |
314 |
Q |
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| T |
49006675 |
tgacattagtgtaggtatatgtgagttttggagaaaatatatagctcaactggtcgttgttagaagtaatgtcaagtagtgaggaaagggtggctaagta |
49006576 |
T |
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| Q |
315 |
ccaactttgttgacttaag |
333 |
Q |
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| T |
49006575 |
ccaactttgttgacttaag |
49006557 |
T |
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