View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19165_low_26 (Length: 214)
Name: NF19165_low_26
Description: NF19165
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19165_low_26 |
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Alignment Details
Target: chr1 (Bit Score: 125; Significance: 1e-64; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 18 - 199
Target Start/End: Original strand, 1239210 - 1239394
Alignment:
| Q |
18 |
aattaagctgactaacaaaagatattagacgatcaaaataactaataaagcacgcatctgaggaccaaactcaccggtaaaacaaacatttagaaatgtt |
117 |
Q |
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|||||||||||||||||||||| |||||| ||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||| |
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| T |
1239210 |
aattaagctgactaacaaaagacattagatgatcaaaataactaataaagcacacatccgaggaccaaactcaccggtaaaacaaacatttagaaatgtt |
1239309 |
T |
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| Q |
118 |
tttgtaatgttgatatatt---nnnnnnnnnnctatataactaagacgttcaaagacgaaaatgaccatttactcgatttttctt |
199 |
Q |
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||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1239310 |
tttgtaatgttgatatatttaaaaaaaaaaaactatataactaagacgttcaaagacgaaaatgaccatttactcgatttttctt |
1239394 |
T |
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