View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF19167_high_7 (Length: 471)
Name: NF19167_high_7
Description: NF19167
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19167_high_7 |
 | |
|
| [»] scaffold0059 (1 HSPs) |
| | |
|
| [»] scaffold0554 (1 HSPs) |
| | |
|
Alignment Details
Target: chr1 (Bit Score: 430; Significance: 0; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 430; E-Value: 0
Query Start/End: Original strand, 21 - 458
Target Start/End: Complemental strand, 12637436 - 12636999
Alignment:
| Q |
21 |
cctgatatatttttcaggacatgattggtgctggaggtgaaacatcatccactaccatagtttgggcaatggcagagttagtaagggatccaagagtgat |
120 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12637436 |
cctgatatatttttcaggacatcattggtgctggaggtgaaacatcatccactaccatagtttgggcaatggcagagttagtaagggatccaagagtgat |
12637337 |
T |
|
| Q |
121 |
gaagaaagcacaatatgaagtgagaaaaatattcaacaagaaaggagctgttggtgaaaactatataaatgaactcgaatatttgaagttagtagtgaaa |
220 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12637336 |
gaagaaagcacaatatgaagtgagaaaaatattcaacaagaaaggaactgttggtgaaaactatataaatgaactcgaatatttgaagttagtagtgaaa |
12637237 |
T |
|
| Q |
221 |
gagactctaaggttacaccctccaactcctcttttacttagagaatgtggacaagcatgtgaaattgaagggtatcatataccagccaaaagtaaggtga |
320 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12637236 |
gagactctaaggttacaccctccaactcctcttttacttagagaatgtggacaagcatgtgaaattgaagggtatcatataccagccaaaagtaaggtga |
12637137 |
T |
|
| Q |
321 |
tagtaaatgcatggacaattggtagagatccaaagtactggactgaaccagagaggtttcatccagagagattcattggtagctctattgactacaaagg |
420 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12637136 |
tagtaaatgcatggacaattggtagagatccaaagtactggactgaaccagagaggtttcatccagagagattcattggtagctctattgactacaaagg |
12637037 |
T |
|
| Q |
421 |
aaataattttgagtacattccttttggtgcaggaagaa |
458 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12637036 |
aaataattttgagtacattccttttggtgcaggaagaa |
12636999 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 233; E-Value: 1e-128
Query Start/End: Original strand, 31 - 458
Target Start/End: Original strand, 15885534 - 15885964
Alignment:
| Q |
31 |
ttttcaggacatgattggtgctggaggtgaaacatcatccactaccatagtttgggcaatggcagagttagtaagggatccaagagtgatgaagaaagca |
130 |
Q |
| |
|
||||||||||||| ||||||||||||| || ||||| || |||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| |
|
|
| T |
15885534 |
ttttcaggacatgtttggtgctggaggagatacatcgagtaccaccatagtttgggcaatggcagagttggtaagggatgaaagagtgatgaagaaagca |
15885633 |
T |
|
| Q |
131 |
caatatgaagtgagaaaaatattcaacaagaaaggagctgttggtgaaaactatataaatgaactcgaatatttgaagttagtagtgaaagagactctaa |
230 |
Q |
| |
|
||| ||||||| ||| |||| ||||||| |||||| ||||||||| |||||||| ||||| ||| |||||||||| ||| ||||||||||| ||| |
|
|
| T |
15885634 |
caagatgaagtaagagaaatgttcaacacaaaaggaattgttggtgagaactatattaatgagctcacttatttgaagtcagttgtgaaagagaccttaa |
15885733 |
T |
|
| Q |
231 |
ggttacaccctccaactcctcttttactt---agagaatgtggacaagcatgtgaaattgaagggtatcatataccagccaaaagtaaggtgatagtaaa |
327 |
Q |
| |
|
|||||||||||||| |||||||||||||| |||||||||| |||||||||||| ||||| || |||||||||||| ||||||| ||||||||||| || |
|
|
| T |
15885734 |
ggttacaccctccagctcctcttttacttccaagagaatgtgaacaagcatgtgagattgatggttatcatataccaaccaaaagcaaggtgatagtcaa |
15885833 |
T |
|
| Q |
328 |
tgcatggacaattggtagagatccaaagtactggactgaaccagagaggtttcatccagagagattcattggtagctctattgactacaaaggaaataat |
427 |
Q |
| |
|
||||||| | ||||| |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| |||||| |
|
|
| T |
15885834 |
tgcatgggcgattggaagagatccaaagtattggactgaaccagagaggttttatccagagagattcattggtagctctattgactataaagggaataat |
15885933 |
T |
|
| Q |
428 |
tttgagtacattccttttggtgcaggaagaa |
458 |
Q |
| |
|
||||||||||||||||||||| | ||||||| |
|
|
| T |
15885934 |
tttgagtacattccttttggttctggaagaa |
15885964 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 45 - 458
Target Start/End: Complemental strand, 12610319 - 12609903
Alignment:
| Q |
45 |
ttggtgctggaggtgaaacatcatccactaccatagtttgggcaatggcagagttagtaagggatccaagagtgatgaagaaagcacaatatgaagtgag |
144 |
Q |
| |
|
|||||||||||||||| |||||| | |||| ||||||||||||||| ||||||| ||||||||| |||||||||||||||||||||| |||| || || |
|
|
| T |
12610319 |
ttggtgctggaggtgatacatcagcttctactatagtttgggcaatgtcagagttggtaagggataaaagagtgatgaagaaagcacaagatgaggtaag |
12610220 |
T |
|
| Q |
145 |
aaaaatattcaacaagaaaggagctgttggtgaaaactatataaatgaactcgaatatttgaagttagtagtgaaagagactctaaggttacaccctcca |
244 |
Q |
| |
|
| | |||||||||| ||||||| ||||| ||||| | ||||||||||||| ||||| |||| ||| ||||||||||| |||||||||| |||||| |
|
|
| T |
12610219 |
agatatattcaacatgaaaggaaatgttgaagaaaattgtataaatgaactcacttatttaaagtcagttgtgaaagagaccttaaggttacatcctcca |
12610120 |
T |
|
| Q |
245 |
actcctcttttactt---agagaatgtggacaagcatgtgaaattgaagggtatcatataccagccaaaagtaaggtgatagtaaatgcatggacaattg |
341 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||| ||||| ||||||| ||||||| |||||| ||||||||||| ||||||||| | |||| |
|
|
| T |
12610119 |
ggtcctcttttacttccaagagaatgtggacaagcatgtgagattgatgggtatcgtataccaatcaaaagcaaggtgatagtcaatgcatgggcgattg |
12610020 |
T |
|
| Q |
342 |
gtagagatccaaagtactggactgaaccagagaggtttcatccagagagattcattggtagctctattgactacaaaggaaataattttgagtacattcc |
441 |
Q |
| |
|
| ||||||||||||||||||||||||||||||| |||| |||| ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
12610019 |
gaagagatccaaagtactggactgaaccagagaagttttatccggagagattcatcggtagctctattgactacaaagggaataattttgagtacattcc |
12609920 |
T |
|
| Q |
442 |
ttttggtgcaggaagaa |
458 |
Q |
| |
|
|||||||| ||||||| |
|
|
| T |
12609919 |
ctttggtgctggaagaa |
12609903 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0059 (Bit Score: 186; Significance: 1e-100; HSPs: 1)
Name: scaffold0059
Description:
Target: scaffold0059; HSP #1
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 31 - 455
Target Start/End: Complemental strand, 62581 - 62154
Alignment:
| Q |
31 |
ttttcaggacatgattggtgctggaggtgaaacatcatccactaccatagtttgggcaatggcagagttagtaagggatccaagagtgatgaagaaagca |
130 |
Q |
| |
|
||||||||||||| |||||||||||||||| |||||| | | | |||||||||||||||||||||| ||||| |||||||||||||||||||||||| |
|
|
| T |
62581 |
ttttcaggacatgtttggtgctggaggtgatacatcagctttgagcgtagtttgggcaatggcagagttggtaagagatccaagagtgatgaagaaagca |
62482 |
T |
|
| Q |
131 |
caatatgaagtgagaaaaatattcaacaagaaaggagctgttggtgaaaactatataaatgaactcgaatatttgaagttagtagtgaaagagactctaa |
230 |
Q |
| |
|
||| ||||||||||| |||||| ||||| ||| |||||| ||| ||||| | ||| |||||||| |||| |||||| | | ||||||||||| || | |
|
|
| T |
62481 |
caagatgaagtgagagaaatatacaacatgaagggagcttttgatgaaagttgtatgcatgaactcaaatacgtgaagtcaattgtgaaagagaccctga |
62382 |
T |
|
| Q |
231 |
ggttacaccctccaactcctcttttactt---agagaatgtggacaagcatgtgaaattgaagggtatcatataccagccaaaagtaaggtgatagtaaa |
327 |
Q |
| |
|
|||||||||| ||| | ||||||||||| ||||||||| || |||||||||| ||||| ||||||||||||||| |||| ||| ||||||| || |
|
|
| T |
62381 |
ggttacaccccccaggtgctcttttacttccaagagaatgtagagaagcatgtgagattgatgggtatcatataccaatgaaaacaaagctgatagttaa |
62282 |
T |
|
| Q |
328 |
tgcatggacaattggtagagatccaaagtactggactgaaccagagaggtttcatccagagagattcattggtagctctattgactacaaaggaaataat |
427 |
Q |
| |
|
||||||| |||| || |||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||| |||||||||||||| || |||||| |
|
|
| T |
62281 |
tgcatgggcaatcggaagagatccaaggtactggacggaaccagagaggttttatccagagagattcattggtagttctattgactacaacgggaataat |
62182 |
T |
|
| Q |
428 |
tttgagtacattccttttggtgcaggaa |
455 |
Q |
| |
|
|| |||||||||||||||||||| |||| |
|
|
| T |
62181 |
ttcgagtacattccttttggtgctggaa |
62154 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 113; Significance: 5e-57; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 31 - 458
Target Start/End: Complemental strand, 21780241 - 21779811
Alignment:
| Q |
31 |
ttttcaggacatgattggtgctggaggtgaaacatcatccactaccatagtttgggcaatggcagagttagtaagggatccaagagtgatgaagaaagca |
130 |
Q |
| |
|
||||||||||||| |||||||||||||||| |||||| | | ||||||| ||||||||||| ||| | ||||||||||||||| | |||||||||||| |
|
|
| T |
21780241 |
ttttcaggacatgtttggtgctggaggtgagacatcagcaagcaccatagattgggcaatggtagaaatggtaagggatccaagaataatgaagaaagca |
21780142 |
T |
|
| Q |
131 |
caatatgaagtgagaaaaatattcaacaagaaaggagctgttggtgaaaactatataaatgaactcgaatatttgaagttagtagtgaaagagactctaa |
230 |
Q |
| |
|
||| ||||||||||| || | ||||| | ||||||| |||| |||||| | || ||||||||| | |||||||| | ||| || ||||| || ||| |
|
|
| T |
21780141 |
caagatgaagtgagagaagttttcaaaatgaaaggaagggttgatgaaaattgcatcaatgaactcaattatttgaaatcagttgtcaaagaaaccttaa |
21780042 |
T |
|
| Q |
231 |
ggttacaccctccaactcctctttt---acttagagaatgtggacaagcatgtgaaattgaagggtatcatataccagccaaaagtaaggtgatagtaaa |
327 |
Q |
| |
|
|| ||||||||||| | |||||||| || ||||||||| | ||||||||||| || | || || || || || || | |||||||||| | || |
|
|
| T |
21780041 |
ggctacaccctccagcacctcttttgttaccgagagaatgtagtcaagcatgtgatataaatggttaccacattccgattaagactaaggtgataatcaa |
21779942 |
T |
|
| Q |
328 |
tgcatggacaattggtagagatccaaagtactggactgaaccagagaggtttcatccagagagattcattggtagctctattgactacaaaggaaataat |
427 |
Q |
| |
|
||| ||| |||||| ||||||||||| ||||||||||||||||||| |||| |||||||||||||||| | |||| |||||||| ||||| | |||| |
|
|
| T |
21779941 |
tgcttgggcaattgcaagagatccaaactactggactgaaccagagatgttttatccagagagattcatcgatagcgatattgactttaaagggagtaat |
21779842 |
T |
|
| Q |
428 |
tttgagtacattccttttggtgcaggaagaa |
458 |
Q |
| |
|
|||||||||||||| |||||||| ||||||| |
|
|
| T |
21779841 |
tttgagtacattccatttggtgccggaagaa |
21779811 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 326 - 458
Target Start/End: Complemental strand, 12438434 - 12438302
Alignment:
| Q |
326 |
aatgcatggacaattggtagagatccaaagtactggactgaaccagagaggtttcatccagagagattcattggtagctctattgactacaaaggaaata |
425 |
Q |
| |
|
||||||||| ||||||| ||||| |||||||| |||| |||| ||| | |||| |||| |||||||| |||| | | | ||||| |||||||| || |
|
|
| T |
12438434 |
aatgcatgggcaattggaagagacccaaagtattggaatgaaggagaaaagtttaatcctgagagatttattgattgtccaattgattacaaagggtcta |
12438335 |
T |
|
| Q |
426 |
attttgagtacattccttttggtgcaggaagaa |
458 |
Q |
| |
|
|||| |||| || ||||||||||| ||||||| |
|
|
| T |
12438334 |
atttcgagtttataccttttggtgctggaagaa |
12438302 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 105; Significance: 3e-52; HSPs: 15)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 31 - 458
Target Start/End: Complemental strand, 23039469 - 23039039
Alignment:
| Q |
31 |
ttttcaggacatgattggtgctggaggtgaaacatcatccactaccatagtttgggcaatggcagagttagtaagggatccaagagtgatgaagaaagca |
130 |
Q |
| |
|
|||||||||| | |||||||||||||||| |||||| | | ||||||| |||||||||| ||| | |||||||||||||| | ||||||||||| |
|
|
| T |
23039469 |
ttttcaggacgtttttggtgctggaggtgagacatcagcaagcaccatagactgggcaatggtagaaatgataagggatccaagaataatgaagaaagcg |
23039370 |
T |
|
| Q |
131 |
caatatgaagtgagaaaaatattcaacaagaaaggagctgttggtgaaaactatataaatgaactcgaatatttgaagttagtagtgaaagagactctaa |
230 |
Q |
| |
|
||| |||| |||||| | | ||||| | ||||||| |||| |||||| | || ||||||||| | |||||||||| ||| || ||||| || || | |
|
|
| T |
23039369 |
caagatgaggtgagagaggttttcaaaatgaaaggaagggttgatgaaaattgcatcaatgaactcaattatttgaagtcagttgtcaaagaaaccctga |
23039270 |
T |
|
| Q |
231 |
ggttacaccctccaactcctcttttactt---agagaatgtggacaagcatgtgaaattgaagggtatcatataccagccaaaagtaaggtgatagtaaa |
327 |
Q |
| |
|
|||||||||||||||| |||||||| || ||||||||| | ||| ||||||| || | || ||||| ||||| || |||||||||||||| || |
|
|
| T |
23039269 |
ggttacaccctccaacacctcttttgctgccaagagaatgtcgtcaaacatgtgagataaatggttatcacatacctattaagagtaaggtgatagtcaa |
23039170 |
T |
|
| Q |
328 |
tgcatggacaattggtagagatccaaagtactggactgaaccagagaggtttcatccagagagattcattggtagctctattgactacaaaggaaataat |
427 |
Q |
| |
|
||| ||| |||||| ||||||||||| ||||||||||| || ||||| ||| |||||||||||||| ||| ||| | |||||||| ||||||| |||| |
|
|
| T |
23039169 |
tgcttgggcaattgcaagagatccaaattactggactgagccggagagattttatccagagagattccttgacagcgccattgactataaaggaagtaat |
23039070 |
T |
|
| Q |
428 |
tttgagtacattccttttggtgcaggaagaa |
458 |
Q |
| |
|
| ||||||||||||||||||||| ||||||| |
|
|
| T |
23039069 |
tatgagtacattccttttggtgccggaagaa |
23039039 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 35 - 458
Target Start/End: Complemental strand, 23146344 - 23145918
Alignment:
| Q |
35 |
caggacatgattggtgctggaggtgaaacatcatccactaccatagtttgggcaatggcagagttagtaagggatccaagagtgatgaagaaagcacaat |
134 |
Q |
| |
|
|||||||| ||| |||||||||||| |||||| | | ||||||| ||||||||||| ||| || |||| |||||||||| | ||||||||||||||| |
|
|
| T |
23146344 |
caggacatttttgctgctggaggtgagacatcagcaagcaccatagattgggcaatggtagaattggtaaaggatccaagaatcatgaagaaagcacaag |
23146245 |
T |
|
| Q |
135 |
atgaagtgagaaaaatattcaacaagaaaggagctgttggtgaaaactatataaatgaactcgaatatttgaagttagtagtgaaagagactctaaggtt |
234 |
Q |
| |
|
|||| |||||| | | ||||| | ||||||| |||| |||||| | || ||||||||| | |||||||| ||||| || ||||| || ||||| | |
|
|
| T |
23146244 |
atgaggtgagagaggttttcaaaatgaaaggaagggttgatgaaaattgcatcaatgaactcaattatttgaaattagttgtcaaagaaaccttaaggct |
23146145 |
T |
|
| Q |
235 |
acaccctccaactcctctttt---acttagagaatgtggacaagcatgtgaaattgaagggtatcatataccagccaaaagtaaggtgatagtaaatgca |
331 |
Q |
| |
|
|||||||||| | |||||||| || ||||||||| | |||| |||||| || | || ||||| ||||| || | ||||||| |||| ||||| |
|
|
| T |
23146144 |
acaccctccagcacctcttttgttaccgagagaatgtagtcaagaatgtgatataaatggttatcacataccgattaagactaaggtgttagtcaatgct |
23146045 |
T |
|
| Q |
332 |
tggacaattggtagagatccaaagtactggactgaaccagagaggtttcatccagagagattcattggtagctctattgactacaaaggaaataattttg |
431 |
Q |
| |
|
||| || ||| ||||||||||| |||||||||||||||||||||||| |||||||||||||||| | ||| ||||||||| ||||| | ||| |||| |
|
|
| T |
23146044 |
tgggcagttgcaagagatccaaactactggactgaaccagagaggttttatccagagagattcatcgacagcgatattgactataaagggagtaactttg |
23145945 |
T |
|
| Q |
432 |
agtacattccttttggtgcaggaagaa |
458 |
Q |
| |
|
||||||||||||||||||| ||||||| |
|
|
| T |
23145944 |
agtacattccttttggtgctggaagaa |
23145918 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 31 - 458
Target Start/End: Complemental strand, 23036598 - 23036168
Alignment:
| Q |
31 |
ttttcaggacatgattggtgctggaggtgaaacatcatccactaccatagtttgggcaatggcagagttagtaagggatccaagagtgatgaagaaagca |
130 |
Q |
| |
|
|||||||||||| |||||||||||||||| |||||| | | ||||||| ||||||||||||||| | |||||| |||||||| | |||||||||||| |
|
|
| T |
23036598 |
ttttcaggacatttttggtgctggaggtgagacatcagcaagcaccatagattgggcaatggcagaaatggtaaggaatccaagaataatgaagaaagca |
23036499 |
T |
|
| Q |
131 |
caatatgaagtgagaaaaatattcaacaagaaaggagctgttggtgaaaactatataaatgaactcgaatatttgaagttagtagtgaaagagactctaa |
230 |
Q |
| |
|
||| ||| |||||| | | ||||| | ||||||| || | || || | ||| || |||||| |||||||| | ||| || ||||| || || | |
|
|
| T |
23036498 |
caagctgaggtgagagaggttttcaaaatgaaaggaagggtcgaagagaattgtatcaacgaactcatttatttgaaatcagtcgtcaaagaaaccctga |
23036399 |
T |
|
| Q |
231 |
ggttacaccctccaactcctcttttactt---agagaatgtggacaagcatgtgaaattgaagggtatcatataccagccaaaagtaaggtgatagtaaa |
327 |
Q |
| |
|
|||||||||||||||| |||||||| || ||||| |||| |||||||||| || | || ||||| ||||| || |||||||| | | |||| |
|
|
| T |
23036398 |
ggttacaccctccaacacctcttttgctaccaagagagtgtgttcaagcatgtgtgataaatggttatcacatacctattaagagtaaggtaacaataaa |
23036299 |
T |
|
| Q |
328 |
tgcatggacaattggtagagatccaaagtactggactgaaccagagaggtttcatccagagagattcattggtagctctattgactacaaaggaaataat |
427 |
Q |
| |
|
||| ||| |||||| ||||||||||| |||||||||||||||||||| ||| |||| ||||||||||| | ||| |||||||||||||||| | ||| |
|
|
| T |
23036298 |
tgcttgggcaattgcaagagatccaaattactggactgaaccagagagattttatcccgagagattcatcgacagcgctattgactacaaagggagtaac |
23036199 |
T |
|
| Q |
428 |
tttgagtacattccttttggtgcaggaagaa |
458 |
Q |
| |
|
||||||||||||||||||||||| ||||||| |
|
|
| T |
23036198 |
tttgagtacattccttttggtgccggaagaa |
23036168 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 28 - 458
Target Start/End: Complemental strand, 23149189 - 23148756
Alignment:
| Q |
28 |
tatttttcaggacatgattggtgctggaggtgaaacatcatccactaccatagtttgggcaatggcagagttagtaagggatccaagagtgatgaagaaa |
127 |
Q |
| |
|
|||| |||||||||| ||||||||||||| || |||||| | | ||||||| ||||||||||| |||| | |||| |||||||||| | ||||||||| |
|
|
| T |
23149189 |
tattgttcaggacatttttggtgctggaggcgagacatcagcaagcaccatagattgggcaatggtagagatggtaaaggatccaagaataatgaagaaa |
23149090 |
T |
|
| Q |
128 |
gcacaatatgaagtgagaaaaatattcaacaagaaaggagctgttggtgaaaactatataaatgaactcgaatatttgaagttagtagtgaaagagactc |
227 |
Q |
| |
|
|||||| |||| |||||| | | ||||| | ||||||| |||| |||||| | || ||||||||| | |||||||| ||||| || ||||| || |
|
|
| T |
23149089 |
gcacaagatgaggtgagagaggttttcaaaatgaaaggaaaggttgatgaaaattgcatcaatgaactcaattatttgaaattagttgtcaaagaaacct |
23148990 |
T |
|
| Q |
228 |
taaggttacaccctccaactcctctttt---acttagagaatgtggacaagcatgtgaaattgaagggtatcatataccagccaaaagtaaggtgatagt |
324 |
Q |
| |
|
||||| |||||||||| | |||||||| || ||||||||| | ||||| ||||| || | || ||||| || || || | ||| |||||| | |
|
|
| T |
23148989 |
taaggctacaccctccggcacctcttttgttaccgagagaatgtagtcaagcgtgtgatataaatggttatcacattccgattaagactaaagtgataat |
23148890 |
T |
|
| Q |
325 |
aaatgcatggacaattggtagagatccaaagtactggactgaaccagagaggtttcatccagagagattcattggtagctctattgactacaaaggaaat |
424 |
Q |
| |
|
||||| ||| |||||| |||||| |||| |||||||||||||||||||||||| |||||||||||||||||| ||| ||||||||| ||||| | | |
|
|
| T |
23148889 |
caatgcttgggcaattgcaagagattcaaactactggactgaaccagagaggttttatccagagagattcattgaaagcgatattgactataaagggagt |
23148790 |
T |
|
| Q |
425 |
aattttgagtacattccttttggtgcaggaagaa |
458 |
Q |
| |
|
|| || |||||||||||||||||||| ||||||| |
|
|
| T |
23148789 |
aacttcgagtacattccttttggtgccggaagaa |
23148756 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 28 - 450
Target Start/End: Complemental strand, 23024703 - 23024278
Alignment:
| Q |
28 |
tatttttcaggacatgattggtgctggaggtgaaacatcatccactaccatagtttgggcaatggcagagttagtaagggatccaagagtgatgaagaaa |
127 |
Q |
| |
|
|||| |||||||||| |||||||||||||||| |||||| | | ||||||| ||||||||||||||| | |||| | |||||||| | ||||||||| |
|
|
| T |
23024703 |
tattgttcaggacatttttggtgctggaggtgagacatcagcaagcaccatagattgggcaatggcagaaatggtaaagaatccaagaataatgaagaaa |
23024604 |
T |
|
| Q |
128 |
gcacaatatgaagtgagaaaaatattcaacaagaaaggagctgttggtgaaaactatataaatgaactcgaatatttgaagttagtagtgaaagagactc |
227 |
Q |
| |
|
|||||| ||| ||| || | || ||||| | ||||||| |||| || || | ||| |||||||| | |||||||| | | | || ||||| || | |
|
|
| T |
23024603 |
gcacaagctgaggtgcgagagattttcaatatgaaaggaagggttgaagagaattgtatcaatgaacttaattatttgaaatcaattgtcaaagaaaccc |
23024504 |
T |
|
| Q |
228 |
taaggttacaccctccaactcctcttttactt---agagaatgtggacaagcatgtgaaattgaagggtatcatataccagccaaaagtaaggtgatagt |
324 |
Q |
| |
|
| |||||||||||||| | || |||||| | |||||||||| ||| ||||| | || || || ||| | || ||| | || | |||||||||||| |
|
|
| T |
23024503 |
tgaggttacaccctccggcaccacttttaataccgagagaatgtgctcaatcatgtaagatagacggttatgacattccaactaagactaaggtgatagt |
23024404 |
T |
|
| Q |
325 |
aaatgcatggacaattggtagagatccaaagtactggactgaaccagagaggtttcatccagagagattcattggtagctctattgactacaaaggaaat |
424 |
Q |
| |
|
||||| ||| |||||| ||||||||||| |||||||| ||||||||||||||| |||||||||||||||| | ||| ||||||||| ||||| | | |
|
|
| T |
23024403 |
caatgcttgggcaattgcaagagatccaaattactggaccgaaccagagaggttttatccagagagattcatcgatagtgatattgactataaagggagt |
23024304 |
T |
|
| Q |
425 |
aattttgagtacattccttttggtgc |
450 |
Q |
| |
|
|| |||||||| |||||||||||||| |
|
|
| T |
23024303 |
aactttgagtatattccttttggtgc |
23024278 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 28 - 450
Target Start/End: Complemental strand, 23140477 - 23140052
Alignment:
| Q |
28 |
tatttttcaggacatgattggtgctggaggtgaaacatcatccactaccatagtttgggcaatggcagagttagtaagggatccaagagtgatgaagaaa |
127 |
Q |
| |
|
|||| |||||||||| |||||||||||||||| |||||| | | ||||||| ||||||||||| ||| | |||||||||||||| | ||||||||| |
|
|
| T |
23140477 |
tattgttcaggacatttttggtgctggaggtgagacatcagcaagcaccatagattgggcaatggtagaaatgataagggatccaagaataatgaagaaa |
23140378 |
T |
|
| Q |
128 |
gcacaatatgaagtgagaaaaatattcaacaagaaaggagctgttggtgaaaactatataaatgaactcgaatatttgaagttagtagtgaaagagactc |
227 |
Q |
| |
|
| ||| |||| |||||| | | ||||| | ||||||| |||| |||||| | || || || ||| | |||||||| | | | || ||||| || |
|
|
| T |
23140377 |
gtgcaagatgaggtgagagaggttttcaaaatgaaaggaagggttgatgaaaattgcatcaacgagctccattatttgaaatcaatcgtcaaagaaacct |
23140278 |
T |
|
| Q |
228 |
taaggttacaccctccaactcctcttttactt---agagaatgtggacaagcatgtgaaattgaagggtatcatataccagccaaaagtaaggtgatagt |
324 |
Q |
| |
|
| ||||||||| |||| |||||||| || ||||| ||||| ||||||||||| || | || ||||| |||||| || | ||||||| | || |
|
|
| T |
23140277 |
tgaggttacacactccggtgcctcttttgctaccaagagagtgtggtcaagcatgtgagatacatggttatcacataccatttaagactaaggtggtcgt |
23140178 |
T |
|
| Q |
325 |
aaatgcatggacaattggtagagatccaaagtactggactgaaccagagaggtttcatccagagagattcattggtagctctattgactacaaaggaaat |
424 |
Q |
| |
|
||||||||| |||| | ||||||||||| ||||||||||||||||||| ||| |||||||||||||||| || | | |||||||||| ||||| | | |
|
|
| T |
23140177 |
caatgcatgggcaatcgcgagagatccaaactactggactgaaccagagaaattttatccagagagattcatgggaaacactattgactataaagggagt |
23140078 |
T |
|
| Q |
425 |
aattttgagtacattccttttggtgc |
450 |
Q |
| |
|
||||||||||||||||||||||||| |
|
|
| T |
23140077 |
gattttgagtacattccttttggtgc |
23140052 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 266 - 458
Target Start/End: Complemental strand, 22972141 - 22971949
Alignment:
| Q |
266 |
tgtggacaagcatgtgaaattgaagggtatcatataccagccaaaagtaaggtgatagtaaatgcatggacaattggtagagatccaaagtactggactg |
365 |
Q |
| |
|
||||||||||| ||||| ||||| || ||||| |||||| |||||||| ||||||| | ||||| ||| ||||||| || |||||||| || ||||||| |
|
|
| T |
22972141 |
tgtggacaagcttgtgagattgatggttatcacataccaatcaaaagtagggtgataatcaatgcttgggcaattggaagggatccaaaatattggactg |
22972042 |
T |
|
| Q |
366 |
aaccagagaggtttcatccagagagattcattggtagctctattgactacaaaggaaataattttgagtacattccttttggtgcaggaagaa |
458 |
Q |
| |
|
| ||||| | |||| |||| || ||||| |||| ||| ||| |||| | |||||||| ||||||||||||||||| |||||||| ||||||| |
|
|
| T |
22972041 |
atccagataagttttatcctgaaagatttattgatagttctcttgatttcaaaggaacaaattttgagtacattccatttggtgctggaagaa |
22971949 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 266 - 456
Target Start/End: Complemental strand, 22946594 - 22946404
Alignment:
| Q |
266 |
tgtggacaagcatgtgaaattgaagggtatcatataccagccaaaagtaaggtgatagtaaatgcatggacaattggtagagatccaaagtactggactg |
365 |
Q |
| |
|
|||| |||||||||||| ||||| || ||||| |||||| ||| |||| ||||||| | ||||| ||| ||||||| || |||||||| || ||||||| |
|
|
| T |
22946594 |
tgtgcacaagcatgtgagattgatggttatcacataccaatcaatagtagggtgataatcaatgcttgggcaattggaagggatccaaaatattggactg |
22946495 |
T |
|
| Q |
366 |
aaccagagaggtttcatccagagagattcattggtagctctattgactacaaaggaaataattttgagtacattccttttggtgcaggaag |
456 |
Q |
| |
|
| ||||| | |||| |||| || ||||| |||| ||| ||| |||| | |||||||| ||||||||||||||||| |||||||| ||||| |
|
|
| T |
22946494 |
atccagataagttttatcctgaaagatttattgatagttctgttgatttcaaaggaacaaattttgagtacattccatttggtgccggaag |
22946404 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 260 - 458
Target Start/End: Complemental strand, 23017258 - 23017060
Alignment:
| Q |
260 |
agagaatgtggacaagcatgtgaaattgaagggtatcatataccagccaaaagtaaggtgatagtaaatgcatggacaattggtagagatccaaagtact |
359 |
Q |
| |
|
||||||||||| |||||||||| || | || ||||| ||||||| || | |||||||||| | ||||| ||| |||| | ||||||||||| |||| |
|
|
| T |
23017258 |
agagaatgtggtaaagcatgtgagatacatggttatcacataccagttaagactaaggtgataattaatgcttgggcaatcgcaagagatccaaactact |
23017159 |
T |
|
| Q |
360 |
ggactgaaccagagaggtttcatccagagagattcattggtagctctattgactacaaaggaaataattttgagtacattccttttggtgcaggaagaa |
458 |
Q |
| |
|
||||||||||||||| |||| |||||||||||||||||| | | ||||||||| ||||| | ||| || || |||||||||||||||| ||||||| |
|
|
| T |
23017158 |
ggactgaaccagagaagttttatccagagagattcattgacaacggtattgactataaagggagtaacttcgaatacattccttttggtggtggaagaa |
23017060 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 260 - 458
Target Start/End: Complemental strand, 23032895 - 23032712
Alignment:
| Q |
260 |
agagaatgtggacaagcatgtgaaattgaagggtatcatataccagccaaaagtaaggtgatagtaaatgcatggacaattggtagagatccaaagtact |
359 |
Q |
| |
|
|||||||| || ||||||||||| || | || ||||| |||||| ||||||||||||||||| ||||| ||| |||||| ||||||||||| |||| |
|
|
| T |
23032895 |
agagaatgcggtcaagcatgtgagataaatggttatcacataccaattaaaagtaaggtgatagtcaatgcttgggcaattgcaagagatccaaactact |
23032796 |
T |
|
| Q |
360 |
ggactgaaccagagaggtttcatccagagagattcattggtagctctattgactacaaaggaaataattttgagtacattccttttggtgcaggaagaa |
458 |
Q |
| |
|
|||||||||||| |||||||||| | ||| |||||||||| ||||||| |||||||||||||||||| |||||||| ||||||| |
|
|
| T |
23032795 |
ggactgaaccag---------------agagattcatcgacagcgctattgactataaaggaagtaattttgagtacattccctttggtgccggaagaa |
23032712 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 260 - 458
Target Start/End: Original strand, 22941378 - 22941576
Alignment:
| Q |
260 |
agagaatgtggacaagcatgtgaaattgaagggtatcatataccagccaaaagtaaggtgatagtaaatgcatggacaattggtagagatccaaagtact |
359 |
Q |
| |
|
|||||||||||||||||||||||||| | |||||| ||||||| ||||| || |||||||| ||||| ||| | ||||| ||||||||||| | | |
|
|
| T |
22941378 |
agagaatgtggacaagcatgtgaaataaatgggtatgatataccttttaaaagcaaagtgatagtgaatgcttgggccattggaagagatccaaatcatt |
22941477 |
T |
|
| Q |
360 |
ggactgaaccagagaggtttcatccagagagattcattggtagctctattgactacaaaggaaataattttgagtacattccttttggtgcaggaagaa |
458 |
Q |
| |
|
|| ||| |||||||| ||| |||| || || || |||| || | | | || || || |||||||||||||||| |||||| |||||||| ||||||| |
|
|
| T |
22941478 |
gggatgacccagagagattttatcctgaaaggtttattgaaagttgtgtagattataagggaaataattttgagttcattccatttggtgctggaagaa |
22941576 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 260 - 450
Target Start/End: Complemental strand, 22832031 - 22831841
Alignment:
| Q |
260 |
agagaatgtggacaagcatgtgaaattgaagggtatcatataccagccaaaagtaaggtgatagtaaatgcatggacaattggtagagatccaaagtact |
359 |
Q |
| |
|
|||||||||||| |||||||||| || | |||||| ||||||| ||||| || |||||||| ||||| ||| | ||||| ||||||||||| | | |
|
|
| T |
22832031 |
agagaatgtggaaaagcatgtgagataaatgggtatgatataccttttaaaagcaaagtgatagtgaatgcttgggctattggaagagatccaaatcatt |
22831932 |
T |
|
| Q |
360 |
ggactgaaccagagaggtttcatccagagagattcattggtagctctattgactacaaaggaaataattttgagtacattccttttggtgc |
450 |
Q |
| |
|
|| || ||||| || ||| |||| || |||||||||| ||| | | | ||||| || || ||||||||||||| ||||||||||||||| |
|
|
| T |
22831931 |
gggacgacccagaaagattttatcctgaaagattcattgatagttgtgtggactataagggtaataattttgagttcattccttttggtgc |
22831841 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 376 - 456
Target Start/End: Complemental strand, 22986357 - 22986277
Alignment:
| Q |
376 |
gtttcatccagagagattcattggtagctctattgactacaaaggaaataattttgagtacattccttttggtgcaggaag |
456 |
Q |
| |
|
|||| |||| ||||| || |||| ||| |||||||| | |||||||| |||||||||||||||||| |||||||| ||||| |
|
|
| T |
22986357 |
gttttatcctgagaggtttattgatagttctattgatttcaaaggaactaattttgagtacattccatttggtgctggaag |
22986277 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 31 - 144
Target Start/End: Complemental strand, 23017490 - 23017377
Alignment:
| Q |
31 |
ttttcaggacatgattggtgctggaggtgaaacatcatccactaccatagtttgggcaatggcagagttagtaagggatccaagagtgatgaagaaagca |
130 |
Q |
| |
|
|||||||||||| | |||| ||||||||| |||||| | | |||| || |||||||||| ||| | ||||| |||||||| | |||||||||||| |
|
|
| T |
23017490 |
ttttcaggacattttcggtggtggaggtgagacatcagcaagcaccacagattgggcaatgatagaaatgataaggaatccaagaataatgaagaaagca |
23017391 |
T |
|
| Q |
131 |
caatatgaagtgag |
144 |
Q |
| |
|
||| |||||||||| |
|
|
| T |
23017390 |
caagatgaagtgag |
23017377 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 266 - 354
Target Start/End: Original strand, 22916681 - 22916769
Alignment:
| Q |
266 |
tgtggacaagcatgtgaaattgaagggtatcatataccagccaaaagtaaggtgatagtaaatgcatggacaattggtagagatccaaa |
354 |
Q |
| |
|
|||||||||||||||||||| | |||||| ||||||| ||||| || |||||||| ||||| ||| | ||||| ||||||||||| |
|
|
| T |
22916681 |
tgtggacaagcatgtgaaataaatgggtatggtataccatttaaaagcaaagtgatagtgaatgcttgggccattggaagagatccaaa |
22916769 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0554 (Bit Score: 77; Significance: 1e-35; HSPs: 1)
Name: scaffold0554
Description:
Target: scaffold0554; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 31 - 458
Target Start/End: Original strand, 6326 - 6756
Alignment:
| Q |
31 |
ttttcaggacatgattggtgctggaggtgaaacatcatccactaccatagtttgggcaatggcagagttagtaagggatccaagagtgatgaagaaagca |
130 |
Q |
| |
|
|||| ||||||| |||||||||||||||| |||||| | || ||||||| ||||||||||||||| | ||||||| |||||| | |||| ||||||| |
|
|
| T |
6326 |
tttttaggacatttttggtgctggaggtgatacatcagcaaccaccatagattgggcaatggcagaaatgataagggagccaagaataatgatgaaagca |
6425 |
T |
|
| Q |
131 |
caatatgaagtgagaaaaatattcaacaagaaaggagctgttggtgaaaactatataaatgaactcgaatatttgaagttagtagtgaaagagactctaa |
230 |
Q |
| |
|
||| ||| ||| || || | || | ||| ||| |||| |||||| || || | ||||| | |||||||| | ||| || ||||| || || | |
|
|
| T |
6426 |
caagctgaggtgcgagaagtttttacattgaatggaaaggttgatgaaaattacattagcaaactcaattatttgaaatcagtcgtcaaagaaaccctta |
6525 |
T |
|
| Q |
231 |
ggttacaccctccaactcctcttttactt---agagaatgtggacaagcatgtgaaattgaagggtatcatataccagccaaaagtaaggtgatagtaaa |
327 |
Q |
| |
|
|||||||||||||| | |||||||| || ||||||||||| |||||||||| || | || ||| | ||||| | |||||||||||| | || |
|
|
| T |
6526 |
ggttacaccctccagcacctcttttgctaccaagagaatgtggtaaagcatgtgagataaatggttataacataccgtttaggagtaaggtgataatcaa |
6625 |
T |
|
| Q |
328 |
tgcatggacaattggtagagatccaaagtactggactgaaccagagaggtttcatccagagagattcattggtagctctattgactacaaaggaaataat |
427 |
Q |
| |
|
||| ||| |||||| ||||||||||| | |||||||||||||||||||||| ||||||||||||||| || ||| |||||||||| ||||| |||| |
|
|
| T |
6626 |
tgcttgggcaattgcaagagatccaaacttctggactgaaccagagaggttttatccagagagattcactgacagcactattgactataaagggggtaat |
6725 |
T |
|
| Q |
428 |
tttgagtacattccttttggtgcaggaagaa |
458 |
Q |
| |
|
||||||||||||||||||||||| ||||||| |
|
|
| T |
6726 |
tttgagtacattccttttggtgctggaagaa |
6756 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 260 - 450
Target Start/End: Original strand, 5594034 - 5594224
Alignment:
| Q |
260 |
agagaatgtggacaagcatgtgaaattgaagggtatcatataccagccaaaagtaaggtgatagtaaatgcatggacaattggtagagatccaaagtact |
359 |
Q |
| |
|
|||||||||||| |||||||||| || | |||||| ||||||| ||||| || |||||||| ||||| ||| | ||||| ||||||||||| | | |
|
|
| T |
5594034 |
agagaatgtggaaaagcatgtgagataaatgggtatgatataccttttaaaagcaaagtgatagtgaatgcttgggctattggaagagatccaaatcatt |
5594133 |
T |
|
| Q |
360 |
ggactgaaccagagaggtttcatccagagagattcattggtagctctattgactacaaaggaaataattttgagtacattccttttggtgc |
450 |
Q |
| |
|
|| || ||||| || ||| |||| || |||||||||| ||| | | | ||||| || || ||||||||||||| ||||||||||||||| |
|
|
| T |
5594134 |
gggacgacccagaaagattttatcctgaaagattcattgatagttgtgtggactataagggtaataattttgagttcattccttttggtgc |
5594224 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 36; Significance: 0.00000000004; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 415 - 458
Target Start/End: Original strand, 7154492 - 7154535
Alignment:
| Q |
415 |
caaaggaaataattttgagtacattccttttggtgcaggaagaa |
458 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||| ||||||| |
|
|
| T |
7154492 |
caaaggaaataattttgagtatattccttttggtgctggaagaa |
7154535 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 317 - 369
Target Start/End: Original strand, 41465802 - 41465854
Alignment:
| Q |
317 |
gtgatagtaaatgcatggacaattggtagagatccaaagtactggactgaacc |
369 |
Q |
| |
|
|||||||||||||||||| | ||||| |||||||||||||| |||| |||||| |
|
|
| T |
41465802 |
gtgatagtaaatgcatgggcgattggaagagatccaaagtattggagtgaacc |
41465854 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 424 - 456
Target Start/End: Original strand, 2433650 - 2433682
Alignment:
| Q |
424 |
taattttgagtacattccttttggtgcaggaag |
456 |
Q |
| |
|
||||||||||||||| ||||||||||||||||| |
|
|
| T |
2433650 |
taattttgagtacataccttttggtgcaggaag |
2433682 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University