View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19167_low_12 (Length: 412)

Name: NF19167_low_12
Description: NF19167
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19167_low_12
NF19167_low_12
[»] chr5 (9 HSPs)
chr5 (83-397)||(23166252-23166579)
chr5 (11-57)||(23166605-23166651)
chr5 (100-147)||(5711788-5711835)
chr5 (100-147)||(9270337-9270384)
chr5 (100-146)||(10365201-10365247)
chr5 (100-146)||(38477487-38477533)
chr5 (100-147)||(14197703-14197750)
chr5 (100-143)||(19965002-19965045)
chr5 (101-147)||(14463675-14463721)
[»] chr2 (4 HSPs)
chr2 (99-147)||(43325367-43325415)
chr2 (103-147)||(43317705-43317749)
chr2 (100-143)||(5377571-5377614)
chr2 (100-147)||(35060418-35060466)
[»] scaffold0122 (1 HSPs)
scaffold0122 (100-147)||(11654-11701)
[»] chr7 (4 HSPs)
chr7 (100-147)||(8227126-8227173)
chr7 (100-147)||(19756514-19756561)
chr7 (99-148)||(11677725-11677774)
chr7 (99-147)||(9626466-9626514)
[»] chr6 (4 HSPs)
chr6 (100-147)||(19686633-19686680)
chr6 (100-147)||(26860218-26860265)
chr6 (100-147)||(29208377-29208424)
chr6 (99-143)||(15917644-15917688)
[»] chr3 (4 HSPs)
chr3 (100-147)||(43366226-43366273)
chr3 (101-147)||(15510664-15510710)
chr3 (104-147)||(24912602-24912645)
chr3 (100-143)||(32311608-32311651)
[»] chr1 (4 HSPs)
chr1 (100-147)||(24029817-24029864)
chr1 (100-147)||(45931651-45931698)
chr1 (100-146)||(46239898-46239944)
chr1 (102-147)||(9154531-9154576)
[»] chr4 (8 HSPs)
chr4 (101-147)||(54452030-54452076)
chr4 (100-143)||(5609544-5609587)
chr4 (100-147)||(11673961-11674008)
chr4 (100-147)||(24703295-24703342)
chr4 (100-146)||(418407-418453)
chr4 (100-141)||(21095458-21095499)
chr4 (100-145)||(30819948-30819993)
chr4 (99-147)||(13610732-13610780)
[»] chr8 (3 HSPs)
chr8 (100-147)||(12806282-12806329)
chr8 (100-147)||(24040952-24040999)
chr8 (100-147)||(39317322-39317369)


Alignment Details
Target: chr5 (Bit Score: 251; Significance: 1e-139; HSPs: 9)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 83 - 397
Target Start/End: Complemental strand, 23166579 - 23166252
Alignment:
Q  83 gaataacacacgtaaatatccatccattaggatcaaaattcatattcatccaatccatccatttttctatcaccagaaagacatggaagcatttggggaa 182  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  23166579 gaataacacacgtaaatatccatccattaggatcaaaattcatattcatccaatccatccatttttctatccccagaaagacatggaagcatttggggaa 23166480  T
Q  183 tagagggtttccttaattcctttgatcaaataacctaggagagtacaaggaatcaagtcctaaagttaggaggnnnnnnntatacaaaaccaatgatgta 282  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||       ||||||||||||||||||||    
T  23166479 tagagggtttccttaattcctttgatcaaataacctagaagagtacaaggaatcaagtcctaaagttaggaggaaaaaaatatacaaaaccaatgatgta 23166380  T
Q  283 caatacacat-------------attaattgtttaattctactcactttgacaacaatgatgtagctacttccttacttttccttccaaaatgaatcttt 369  Q
    ||||||||||             |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23166379 caatacacatataatatataaaaattaattgtttaattctactgactttgacaacaatgatgtagctacttccttacttttccttccaaaatgaatcttt 23166280  T
Q  370 cgatggaaagaaaattcataatgtatat 397  Q
    ||||||||||||||||||||||||||||    
T  23166279 cgatggaaagaaaattcataatgtatat 23166252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 11 - 57
Target Start/End: Complemental strand, 23166651 - 23166605
Alignment:
Q  11 cataggtgggaaatgtaataaccaaaatctatttagattgaattcat 57  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||    
T  23166651 cataggtgggaaaagtaataaccaaaatctatttagattgaattcat 23166605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 100 - 147
Target Start/End: Original strand, 5711788 - 5711835
Alignment:
Q  100 atccatccattaggatcaaaattcatattcatccaatccatccatttt 147  Q
    ||||||||||||||||| |||| ||||| |||||||||||||||||||    
T  5711788 atccatccattaggatccaaatccatatccatccaatccatccatttt 5711835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 100 - 147
Target Start/End: Complemental strand, 9270384 - 9270337
Alignment:
Q  100 atccatccattaggatcaaaattcatattcatccaatccatccatttt 147  Q
    ||||||||||||||||| ||||| |||| |||||||||||||||||||    
T  9270384 atccatccattaggatccaaatttatatccatccaatccatccatttt 9270337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 100 - 146
Target Start/End: Complemental strand, 10365247 - 10365201
Alignment:
Q  100 atccatccattaggatcaaaattcatattcatccaatccatccattt 146  Q
    ||||||||||||||||| |||| ||||| ||||||||||||||||||    
T  10365247 atccatccattaggatccaaatccatatccatccaatccatccattt 10365201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 100 - 146
Target Start/End: Complemental strand, 38477533 - 38477487
Alignment:
Q  100 atccatccattaggatcaaaattcatattcatccaatccatccattt 146  Q
    ||||||||||||||||| |||| ||||| ||||||||||||||||||    
T  38477533 atccatccattaggatccaaatccatatccatccaatccatccattt 38477487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 100 - 147
Target Start/End: Original strand, 14197703 - 14197750
Alignment:
Q  100 atccatccattaggatcaaaattcatattcatccaatccatccatttt 147  Q
    |||||||||||| |||| |||| ||||| |||||||||||||||||||    
T  14197703 atccatccattaagatccaaatccatatccatccaatccatccatttt 14197750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 100 - 143
Target Start/End: Complemental strand, 19965045 - 19965002
Alignment:
Q  100 atccatccattaggatcaaaattcatattcatccaatccatcca 143  Q
    ||||||||||||| ||| |||||||||| |||||||||||||||    
T  19965045 atccatccattagaatccaaattcatatccatccaatccatcca 19965002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 101 - 147
Target Start/End: Original strand, 14463675 - 14463721
Alignment:
Q  101 tccatccattaggatcaaaattcatattcatccaatccatccatttt 147  Q
    |||||||||||||||| |||| ||||| |||| ||||||||||||||    
T  14463675 tccatccattaggatccaaatccatatccatcaaatccatccatttt 14463721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 37; Significance: 0.00000000001; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 99 - 147
Target Start/End: Original strand, 43325367 - 43325415
Alignment:
Q  99 tatccatccattaggatcaaaattcatattcatccaatccatccatttt 147  Q
    |||||||||||||| ||| |||| |||||||||||||||||||||||||    
T  43325367 tatccatccattagaatccaaatccatattcatccaatccatccatttt 43325415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 103 - 147
Target Start/End: Complemental strand, 43317749 - 43317705
Alignment:
Q  103 catccattaggatcaaaattcatattcatccaatccatccatttt 147  Q
    ||||||||| |||| |||| |||||||||||||||||||||||||    
T  43317749 catccattaagatccaaatccatattcatccaatccatccatttt 43317705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 100 - 143
Target Start/End: Original strand, 5377571 - 5377614
Alignment:
Q  100 atccatccattaggatcaaaattcatattcatccaatccatcca 143  Q
    ||||||||||||||||| |||| ||||| |||||||||||||||    
T  5377571 atccatccattaggatccaaatccatatccatccaatccatcca 5377614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 100 - 147
Target Start/End: Original strand, 35060418 - 35060466
Alignment:
Q  100 atccatccattaggatcaaaattcatattcat-ccaatccatccatttt 147  Q
    ||||||||||||||||| |||| ||||| ||| ||||||||||||||||    
T  35060418 atccatccattaggatccaaatccatatccatcccaatccatccatttt 35060466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 100 - 147
Target Start/End: Complemental strand, 11701 - 11654
Alignment:
Q  100 atccatccattaggatcaaaattcatattcatccaatccatccatttt 147  Q
    ||||||||||||||||| |||| |||| ||||||||||||||||||||    
T  11701 atccatccattaggatccaaatccataatcatccaatccatccatttt 11654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 36; Significance: 0.00000000004; HSPs: 4)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 100 - 147
Target Start/End: Original strand, 8227126 - 8227173
Alignment:
Q  100 atccatccattaggatcaaaattcatattcatccaatccatccatttt 147  Q
    ||||||||||||||||| |||| ||||| |||||||||||||||||||    
T  8227126 atccatccattaggatccaaatccatatccatccaatccatccatttt 8227173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 100 - 147
Target Start/End: Original strand, 19756514 - 19756561
Alignment:
Q  100 atccatccattaggatcaaaattcatattcatccaatccatccatttt 147  Q
    ||||||||||||||||| ||||  |||| |||||||||||||||||||    
T  19756514 atccatccattaggatccaaatctatatacatccaatccatccatttt 19756561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 148
Target Start/End: Original strand, 11677725 - 11677774
Alignment:
Q  99 tatccatccattaggatcaaaattcatattcatccaatccatccattttt 148  Q
    ||||||| ||||| |||| | ||||||||||||||||||| |||||||||    
T  11677725 tatccattcattatgatctatattcatattcatccaatccttccattttt 11677774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 99 - 147
Target Start/End: Complemental strand, 9626514 - 9626466
Alignment:
Q  99 tatccatccattaggatcaaaattcatattcatccaatccatccatttt 147  Q
    |||| |||||||| |||| |||| ||||| |||||||||||||||||||    
T  9626514 tatcaatccattaagatccaaatccatatccatccaatccatccatttt 9626466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 36; Significance: 0.00000000004; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 100 - 147
Target Start/End: Original strand, 19686633 - 19686680
Alignment:
Q  100 atccatccattaggatcaaaattcatattcatccaatccatccatttt 147  Q
    ||||||||||||||||| |||||||||| ||||||||||||| |||||    
T  19686633 atccatccattaggatccaaattcatatccatccaatccatctatttt 19686680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 100 - 147
Target Start/End: Original strand, 26860218 - 26860265
Alignment:
Q  100 atccatccattaggatcaaaattcatattcatccaatccatccatttt 147  Q
    ||||||||| ||||||| |||| ||||| |||||||||||||||||||    
T  26860218 atccatccactaggatccaaatccatatccatccaatccatccatttt 26860265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 100 - 147
Target Start/End: Complemental strand, 29208424 - 29208377
Alignment:
Q  100 atccatccattaggatcaaaattcatattcatccaatccatccatttt 147  Q
    ||||||||||||||||| |||| ||||| |||| ||||||||||||||    
T  29208424 atccatccattaggatctaaatccatatccatctaatccatccatttt 29208377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 99 - 143
Target Start/End: Complemental strand, 15917688 - 15917644
Alignment:
Q  99 tatccatccattaggatcaaaattcatattcatccaatccatcca 143  Q
    ||||||||||||  |||| |||||||||| |||||||||||||||    
T  15917688 tatccatccattcagatccaaattcatatccatccaatccatcca 15917644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 36; Significance: 0.00000000004; HSPs: 4)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 100 - 147
Target Start/End: Original strand, 43366226 - 43366273
Alignment:
Q  100 atccatccattaggatcaaaattcatattcatccaatccatccatttt 147  Q
    |||||||||||| |||| |||||||||| |||||||||||||||||||    
T  43366226 atccatccattatgatccaaattcatatccatccaatccatccatttt 43366273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 101 - 147
Target Start/End: Complemental strand, 15510710 - 15510664
Alignment:
Q  101 tccatccattaggatcaaaattcatattcatccaatccatccatttt 147  Q
    |||||||||||||||| |||| ||||| |||||||||||||||||||    
T  15510710 tccatccattaggatccaaatccatatccatccaatccatccatttt 15510664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 104 - 147
Target Start/End: Original strand, 24912602 - 24912645
Alignment:
Q  104 atccattaggatcaaaattcatattcatccaatccatccatttt 147  Q
    ||||||||||||| |||| ||||| |||||||||||||||||||    
T  24912602 atccattaggatccaaatccatatccatccaatccatccatttt 24912645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 100 - 143
Target Start/End: Complemental strand, 32311651 - 32311608
Alignment:
Q  100 atccatccattaggatcaaaattcatattcatccaatccatcca 143  Q
    ||||||||||||||||| |||| ||||| |||||||||||||||    
T  32311651 atccatccattaggatccaaatccatatccatccaatccatcca 32311608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 36; Significance: 0.00000000004; HSPs: 4)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 100 - 147
Target Start/End: Original strand, 24029817 - 24029864
Alignment:
Q  100 atccatccattaggatcaaaattcatattcatccaatccatccatttt 147  Q
    ||||||||||||||||| |||| ||||| |||||||||||||||||||    
T  24029817 atccatccattaggatccaaatccatatccatccaatccatccatttt 24029864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 100 - 147
Target Start/End: Original strand, 45931651 - 45931698
Alignment:
Q  100 atccatccattaggatcaaaattcatattcatccaatccatccatttt 147  Q
    ||||||||||||||||| |||| ||||| |||||||||||||||||||    
T  45931651 atccatccattaggatccaaatccatatccatccaatccatccatttt 45931698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 100 - 146
Target Start/End: Complemental strand, 46239944 - 46239898
Alignment:
Q  100 atccatccattaggatcaaaattcatattcatccaatccatccattt 146  Q
    ||||||||||||||||| |||| ||||| |||||||| |||||||||    
T  46239944 atccatccattaggatccaaatccatatccatccaattcatccattt 46239898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 147
Target Start/End: Original strand, 9154531 - 9154576
Alignment:
Q  102 ccatccattaggatcaaaattcatattcatccaatccatccatttt 147  Q
    ||||||||||||||| |||| ||||| ||| |||||||||||||||    
T  9154531 ccatccattaggatccaaatccatatccattcaatccatccatttt 9154576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 35; Significance: 0.0000000001; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 101 - 147
Target Start/End: Complemental strand, 54452076 - 54452030
Alignment:
Q  101 tccatccattaggatcaaaattcatattcatccaatccatccatttt 147  Q
    |||||||||||||||| |||| ||||| |||||||||||||||||||    
T  54452076 tccatccattaggatccaaatccatatccatccaatccatccatttt 54452030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 100 - 143
Target Start/End: Complemental strand, 5609587 - 5609544
Alignment:
Q  100 atccatccattaggatcaaaattcatattcatccaatccatcca 143  Q
    ||||||||||||||||| |||| ||||| |||||||||||||||    
T  5609587 atccatccattaggatccaaatccatatccatccaatccatcca 5609544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 100 - 147
Target Start/End: Complemental strand, 11674008 - 11673961
Alignment:
Q  100 atccatccattaggatcaaaattcatattcatccaatccatccatttt 147  Q
    ||||||||||||||||| ||||  |||| |||||||||||||||||||    
T  11674008 atccatccattaggatccaaatctatatccatccaatccatccatttt 11673961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 100 - 147
Target Start/End: Original strand, 24703295 - 24703342
Alignment:
Q  100 atccatccattaggatcaaaattcatattcatccaatccatccatttt 147  Q
    |||||||||||| |||| |||||||||  |||||||||||||||||||    
T  24703295 atccatccattaagatccaaattcataaccatccaatccatccatttt 24703342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 100 - 146
Target Start/End: Complemental strand, 418453 - 418407
Alignment:
Q  100 atccatccattaggatcaaaattcatattcatccaatccatccattt 146  Q
    ||||||||||||||||| |||| ||||| ||||||||| ||||||||    
T  418453 atccatccattaggatccaaatccatatccatccaatcaatccattt 418407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 100 - 141
Target Start/End: Complemental strand, 21095499 - 21095458
Alignment:
Q  100 atccatccattaggatcaaaattcatattcatccaatccatc 141  Q
    ||||||| |||| |||| ||||||||||||||||||||||||    
T  21095499 atccatctattatgatctaaattcatattcatccaatccatc 21095458  T

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Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 100 - 145
Target Start/End: Original strand, 30819948 - 30819993
Alignment:
Q  100 atccatccattaggatcaaaattcatattcatccaatccatccatt 145  Q
    ||||||||||||||||| |||| ||||| |||||||| ||||||||    
T  30819948 atccatccattaggatccaaatccatatccatccaattcatccatt 30819993  T

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Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 99 - 147
Target Start/End: Original strand, 13610732 - 13610780
Alignment:
Q  99 tatccatccattaggatcaaaattcatattcatccaatccatccatttt 147  Q
    |||| |||||||| |||| |||| ||||| |||||||||||||||||||    
T  13610732 tatcaatccattaagatccaaatccatatccatccaatccatccatttt 13610780  T

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Target: chr8 (Bit Score: 32; Significance: 0.000000009; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 100 - 147
Target Start/End: Complemental strand, 12806329 - 12806282
Alignment:
Q  100 atccatccattaggatcaaaattcatattcatccaatccatccatttt 147  Q
    ||||||||||||||||| |||| ||||| |||| ||||||||||||||    
T  12806329 atccatccattaggatccaaatccatatccatcaaatccatccatttt 12806282  T

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Target: chr8; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 100 - 147
Target Start/End: Complemental strand, 24040999 - 24040952
Alignment:
Q  100 atccatccattaggatcaaaattcatattcatccaatccatccatttt 147  Q
    |||||| ||||| |||| |||||||||| |||||||||||||||||||    
T  24040999 atccattcattaagatccaaattcatatccatccaatccatccatttt 24040952  T

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Target: chr8; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 100 - 147
Target Start/End: Complemental strand, 39317369 - 39317322
Alignment:
Q  100 atccatccattaggatcaaaattcatattcatccaatccatccatttt 147  Q
    ||||||||||||  ||| |||||||||| |||||||||||||||||||    
T  39317369 atccatccattaaaatccaaattcatatccatccaatccatccatttt 39317322  T

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