View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19168_low_22 (Length: 297)

Name: NF19168_low_22
Description: NF19168
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19168_low_22
NF19168_low_22
[»] chr3 (38 HSPs)
chr3 (136-206)||(30289250-30289319)
chr3 (1-43)||(11751216-11751258)
chr3 (1-43)||(28171061-28171103)
chr3 (1-43)||(40840173-40840215)
chr3 (3-43)||(8792813-8792853)
chr3 (1-43)||(46838809-46838850)
chr3 (1-43)||(47069011-47069053)
chr3 (2-43)||(41921511-41921551)
chr3 (1-37)||(3440736-3440772)
chr3 (1-37)||(9583505-9583541)
chr3 (3-43)||(11029668-11029708)
chr3 (3-43)||(39948530-39948570)
chr3 (4-43)||(54923490-54923529)
chr3 (1-43)||(2687564-2687605)
chr3 (1-43)||(3917771-3917812)
chr3 (1-43)||(4232259-4232300)
chr3 (1-43)||(4833191-4833232)
chr3 (1-43)||(6583317-6583358)
chr3 (1-43)||(8381084-8381125)
chr3 (1-43)||(8507937-8507978)
chr3 (1-43)||(11312595-11312636)
chr3 (1-43)||(12948815-12948856)
chr3 (1-43)||(13525174-13525215)
chr3 (1-43)||(17500932-17500973)
chr3 (1-43)||(24751758-24751799)
chr3 (1-43)||(29212147-29212188)
chr3 (1-43)||(32590977-32591018)
chr3 (1-43)||(33095982-33096024)
chr3 (1-43)||(37312533-37312574)
chr3 (1-43)||(46311525-46311566)
chr3 (1-43)||(48191099-48191140)
chr3 (1-43)||(50238922-50238963)
chr3 (2-43)||(23878951-23878991)
chr3 (2-43)||(31828404-31828445)
chr3 (2-43)||(32961061-32961101)
chr3 (1-37)||(1218453-1218488)
chr3 (3-43)||(7251623-7251663)
chr3 (3-43)||(24910372-24910411)
[»] scaffold0024 (1 HSPs)
scaffold0024 (1-43)||(160452-160494)
[»] chr7 (29 HSPs)
chr7 (1-43)||(46021513-46021555)
chr7 (7-43)||(12964581-12964617)
chr7 (1-43)||(964355-964397)
chr7 (1-43)||(1573923-1573964)
chr7 (1-43)||(1869820-1869862)
chr7 (1-43)||(4106559-4106600)
chr7 (1-43)||(31717302-31717343)
chr7 (1-43)||(33228704-33228746)
chr7 (1-43)||(40013268-40013310)
chr7 (3-43)||(34708678-34708718)
chr7 (1-43)||(9234329-9234372)
chr7 (4-43)||(46274952-46274991)
chr7 (1-43)||(2354879-2354920)
chr7 (1-43)||(3497599-3497640)
chr7 (1-43)||(4887595-4887636)
chr7 (1-43)||(6384600-6384641)
chr7 (1-43)||(10061098-10061139)
chr7 (1-43)||(10166875-10166916)
chr7 (1-43)||(23789495-23789537)
chr7 (1-43)||(27396396-27396437)
chr7 (1-43)||(33512802-33512843)
chr7 (1-43)||(35157166-35157207)
chr7 (1-43)||(38504605-38504647)
chr7 (1-43)||(43188534-43188576)
chr7 (1-43)||(45236935-45236976)
chr7 (1-43)||(47086382-47086424)
chr7 (1-43)||(48612522-48612563)
chr7 (1-43)||(48729766-48729807)
chr7 (3-43)||(43133187-43133227)
[»] chr6 (28 HSPs)
chr6 (1-43)||(16496734-16496776)
chr6 (1-37)||(9949233-9949269)
chr6 (4-43)||(2018847-2018886)
chr6 (1-43)||(1266824-1266866)
chr6 (1-43)||(31444372-31444414)
chr6 (2-43)||(10330809-10330850)
chr6 (1-40)||(7098971-7099009)
chr6 (1-43)||(1241600-1241641)
chr6 (1-43)||(2314681-2314722)
chr6 (1-43)||(4128950-4128991)
chr6 (1-43)||(7098811-7098852)
chr6 (1-43)||(8448224-8448265)
chr6 (1-43)||(8457028-8457069)
chr6 (1-43)||(8487635-8487676)
chr6 (1-43)||(8977159-8977201)
chr6 (1-43)||(12795101-12795142)
chr6 (5-43)||(15953239-15953276)
chr6 (1-43)||(17534605-17534646)
chr6 (1-43)||(18861849-18861890)
chr6 (1-43)||(31205265-31205306)
chr6 (1-43)||(32643810-32643851)
chr6 (2-43)||(4891013-4891053)
chr6 (4-40)||(5626145-5626180)
chr6 (1-37)||(8795491-8795526)
chr6 (3-43)||(13507394-13507433)
chr6 (3-43)||(28533445-28533485)
chr6 (1-37)||(31747068-31747103)
chr6 (3-43)||(32107919-32107958)
[»] chr5 (38 HSPs)
chr5 (1-43)||(8595569-8595611)
chr5 (1-43)||(21728665-21728707)
chr5 (1-43)||(23074726-23074768)
chr5 (4-43)||(22792195-22792234)
chr5 (1-43)||(1833401-1833443)
chr5 (1-43)||(30527986-30528028)
chr5 (1-43)||(30568326-30568368)
chr5 (1-43)||(40318867-40318909)
chr5 (1-43)||(41408631-41408673)
chr5 (4-44)||(12769210-12769249)
chr5 (1-36)||(34856592-34856627)
chr5 (1-43)||(1244263-1244304)
chr5 (1-43)||(1277442-1277484)
chr5 (1-43)||(2103031-2103072)
chr5 (1-43)||(4164964-4165005)
chr5 (1-43)||(4617848-4617889)
chr5 (1-43)||(6672246-6672287)
chr5 (1-43)||(9902583-9902624)
chr5 (1-43)||(10393584-10393625)
chr5 (1-43)||(12878200-12878241)
chr5 (1-43)||(17869206-17869247)
chr5 (1-43)||(18473919-18473960)
chr5 (1-43)||(23311255-23311296)
chr5 (1-43)||(25328386-25328427)
chr5 (1-43)||(26526517-26526559)
chr5 (5-43)||(27004051-27004088)
chr5 (1-43)||(28143314-28143355)
chr5 (1-43)||(29119611-29119652)
chr5 (1-43)||(33617101-33617142)
chr5 (1-43)||(36569284-36569325)
chr5 (1-43)||(36726994-36727035)
chr5 (1-43)||(36790397-36790439)
chr5 (1-43)||(39151008-39151049)
chr5 (1-43)||(40595962-40596003)
chr5 (1-43)||(41562463-41562504)
chr5 (6-43)||(41215322-41215359)
chr5 (4-44)||(12262874-12262914)
chr5 (3-43)||(39527937-39527976)
[»] chr4 (31 HSPs)
chr4 (1-43)||(24870601-24870643)
chr4 (1-44)||(28033196-28033238)
chr4 (1-43)||(13632094-13632136)
chr4 (1-43)||(35273388-35273430)
chr4 (3-43)||(21156039-21156079)
chr4 (4-43)||(55853399-55853438)
chr4 (1-43)||(1033531-1033572)
chr4 (1-43)||(1982566-1982607)
chr4 (1-43)||(5397022-5397063)
chr4 (1-43)||(9569480-9569521)
chr4 (1-43)||(9749164-9749206)
chr4 (1-43)||(12821170-12821211)
chr4 (1-43)||(23974724-23974765)
chr4 (1-43)||(30044666-30044707)
chr4 (1-43)||(31436000-31436041)
chr4 (1-43)||(33840624-33840666)
chr4 (244-282)||(35595146-35595184)
chr4 (1-43)||(35828279-35828320)
chr4 (1-43)||(37166143-37166184)
chr4 (1-43)||(37340189-37340231)
chr4 (1-43)||(42154220-42154261)
chr4 (1-43)||(42856568-42856609)
chr4 (1-43)||(46343333-46343375)
chr4 (1-43)||(46488199-46488240)
chr4 (1-43)||(47462118-47462159)
chr4 (1-43)||(49535890-49535931)
chr4 (1-43)||(49882791-49882832)
chr4 (1-43)||(54907974-54908015)
chr4 (2-43)||(26186220-26186261)
chr4 (2-43)||(50981781-50981822)
chr4 (3-43)||(31010029-31010068)
[»] chr1 (33 HSPs)
chr1 (1-43)||(270403-270445)
chr1 (1-43)||(7204590-7204632)
chr1 (2-43)||(17540159-17540200)
chr1 (3-43)||(49632559-49632599)
chr1 (1-43)||(10430421-10430463)
chr1 (1-43)||(17068157-17068198)
chr1 (1-43)||(26261375-26261416)
chr1 (1-43)||(37186899-37186941)
chr1 (1-43)||(39606409-39606451)
chr1 (3-43)||(3628659-3628699)
chr1 (4-43)||(5598306-5598344)
chr1 (4-43)||(15331147-15331185)
chr1 (4-43)||(19279937-19279975)
chr1 (4-43)||(23225375-23225414)
chr1 (4-43)||(41651078-41651116)
chr1 (1-43)||(10635494-10635535)
chr1 (1-43)||(19338260-19338301)
chr1 (1-43)||(24119661-24119702)
chr1 (1-43)||(28999379-28999420)
chr1 (1-43)||(29005095-29005136)
chr1 (1-43)||(34271102-34271144)
chr1 (1-43)||(40809295-40809336)
chr1 (1-43)||(40958656-40958697)
chr1 (1-43)||(42631067-42631108)
chr1 (1-43)||(43086553-43086594)
chr1 (1-43)||(43676106-43676147)
chr1 (1-43)||(45611543-45611585)
chr1 (1-43)||(48314172-48314213)
chr1 (1-43)||(48391961-48392002)
chr1 (1-43)||(49500866-49500907)
chr1 (2-43)||(4628047-4628088)
chr1 (2-43)||(16867475-16867516)
chr1 (2-43)||(38886472-38886512)
[»] chr2 (28 HSPs)
chr2 (4-43)||(11543884-11543923)
chr2 (1-43)||(12236126-12236167)
chr2 (1-43)||(39070024-39070065)
chr2 (2-43)||(19134599-19134640)
chr2 (1-43)||(2287391-2287432)
chr2 (1-43)||(7975096-7975137)
chr2 (1-43)||(10392650-10392691)
chr2 (1-43)||(15897219-15897260)
chr2 (1-43)||(20251567-20251608)
chr2 (5-43)||(22999079-22999117)
chr2 (1-43)||(23080180-23080221)
chr2 (1-43)||(23497594-23497635)
chr2 (1-43)||(25510384-25510425)
chr2 (1-43)||(31516287-31516328)
chr2 (1-43)||(32023257-32023298)
chr2 (1-43)||(34242533-34242574)
chr2 (1-43)||(34667049-34667090)
chr2 (1-43)||(35687868-35687909)
chr2 (1-43)||(36754823-36754864)
chr2 (1-43)||(38490482-38490523)
chr2 (1-43)||(42007297-42007338)
chr2 (1-43)||(42160339-42160380)
chr2 (1-43)||(43461416-43461457)
chr2 (1-42)||(12221226-12221267)
chr2 (2-43)||(33607048-33607088)
chr2 (3-43)||(32517902-32517942)
chr2 (3-43)||(34481755-34481794)
chr2 (1-41)||(39417449-39417489)
[»] scaffold0008 (1 HSPs)
scaffold0008 (1-43)||(39395-39436)
[»] chr8 (29 HSPs)
chr8 (1-43)||(1522697-1522739)
chr8 (1-43)||(7772132-7772173)
chr8 (1-43)||(11100370-11100411)
chr8 (1-43)||(25063344-25063386)
chr8 (1-43)||(25199051-25199092)
chr8 (1-43)||(26675562-26675603)
chr8 (1-43)||(26737976-26738017)
chr8 (1-43)||(36442769-36442811)
chr8 (2-43)||(11637635-11637676)
chr8 (2-43)||(40418132-40418173)
chr8 (6-43)||(42158563-42158600)
chr8 (3-43)||(14243704-14243743)
chr8 (1-40)||(16816833-16816872)
chr8 (1-44)||(37953787-37953829)
chr8 (1-43)||(40216783-40216826)
chr8 (1-43)||(2733621-2733662)
chr8 (1-43)||(4430817-4430858)
chr8 (1-43)||(4977116-4977157)
chr8 (1-43)||(6317305-6317346)
chr8 (1-43)||(24242667-24242709)
chr8 (1-43)||(26690699-26690740)
chr8 (1-43)||(27849824-27849866)
chr8 (1-43)||(33067470-33067511)
chr8 (1-43)||(37295131-37295172)
chr8 (1-43)||(38070563-38070604)
chr8 (1-43)||(41562447-41562488)
chr8 (1-43)||(44814868-44814909)
chr8 (4-40)||(3673928-3673964)
chr8 (3-43)||(16501653-16501693)
[»] scaffold0633 (1 HSPs)
scaffold0633 (4-43)||(3880-3918)
[»] scaffold0457 (1 HSPs)
scaffold0457 (1-43)||(6784-6825)
[»] scaffold0432 (1 HSPs)
scaffold0432 (1-43)||(9372-9413)
[»] scaffold0402 (1 HSPs)
scaffold0402 (1-43)||(1323-1364)
[»] scaffold0287 (1 HSPs)
scaffold0287 (1-43)||(1140-1181)
[»] scaffold0013 (1 HSPs)
scaffold0013 (2-43)||(90574-90614)


Alignment Details
Target: chr3 (Bit Score: 51; Significance: 3e-20; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 136 - 206
Target Start/End: Complemental strand, 30289319 - 30289250
Alignment:
Q  136 ttataaaaatcgacaatatgatgaataacaaaatactgatttgttcacaaataaaagtagagtataatcta 206  Q
    ||||||||||||||||||||||||||||| || |||| ||||||||||||| |||||||||||||||||||    
T  30289319 ttataaaaatcgacaatatgatgaataaccaa-tacttatttgttcacaaacaaaagtagagtataatcta 30289250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 11751258 - 11751216
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  11751258 cggcctaacaatttcggcatttttgccagttgagctaggactt 11751216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 28171061 - 28171103
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  28171061 cggcctaacaatttcggcatttttgccagttgagctaggactt 28171103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 40840215 - 40840173
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  40840215 cggcctaacaatttcggcatttttgccagttgagctaggactt 40840173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 8792813 - 8792853
Alignment:
Q  3 gcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||||||||| |||||||||||||||    
T  8792813 gcctaacaatttcggcatttttaccggttgagctaggactt 8792853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 46838809 - 46838850
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  46838809 cggcctaacaatttcggcattttt-ccagttgagctaggactt 46838850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 47069053 - 47069011
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    |||||||||||||||||||||||| |||||||||||| |||||    
T  47069053 cggcctaacaatttcggcatttttgccagttgagctaagactt 47069011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 43
Target Start/End: Complemental strand, 41921551 - 41921511
Alignment:
Q  2 ggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    |||||||||||||||||||||| |||||||||||||||||||    
T  41921551 ggcctaacaatttcggcatttt-accagttgagctaggactt 41921511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 3440772 - 3440736
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagcta 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  3440772 cggcctaacaatttcggcatttttgccagttgagcta 3440736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 9583505 - 9583541
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagcta 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  9583505 cggcctaacaatttcggcatttttgccagttgagcta 9583541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 11029708 - 11029668
Alignment:
Q  3 gcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    |||||||||||||| ||||||| ||||||||||||||||||    
T  11029708 gcctaacaatttcgacatttttgccagttgagctaggactt 11029668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 39948570 - 39948530
Alignment:
Q  3 gcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||  |||||||||||||||||||||||||    
T  39948570 gcctaacaatttcgatatttttaccagttgagctaggactt 39948530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 43
Target Start/End: Complemental strand, 54923529 - 54923490
Alignment:
Q  4 cctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||| ||||||||||||||||| ||||||||    
T  54923529 cctaacaatttcgacatttttaccagttgagttaggactt 54923490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 2687605 - 2687564
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  2687605 cggcctaacaatttcggca-ttttgccagttgagctaggactt 2687564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 3917812 - 3917771
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  3917812 cggcctaacaatttcggca-ttttgccagttgagctaggactt 3917771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 4232259 - 4232300
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  4232259 cggcctaacaatttcggca-ttttgccagttgagctaggactt 4232300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 4833191 - 4833232
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  4833191 cggcctaacaatttcggca-ttttgccagttgagctaggactt 4833232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 6583317 - 6583358
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  6583317 cggcctaacaatttcggca-ttttgccagttgagctaggactt 6583358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 8381125 - 8381084
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  8381125 cggcctaacaatttcggca-ttttgccagttgagctaggactt 8381084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 8507978 - 8507937
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    |||||||||||||||||||||||| |||||||||||| |||||    
T  8507978 cggcctaacaatttcggcattttt-ccagttgagctaagactt 8507937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 11312636 - 11312595
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  11312636 cggcctaacaatttcggca-ttttgccagttgagctaggactt 11312595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 12948856 - 12948815
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    |||||||||||||||| |||||| |||||||||||||||||||    
T  12948856 cggcctaacaatttcgtcatttt-accagttgagctaggactt 12948815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 13525215 - 13525174
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  13525215 cggcctaacaatttcggca-ttttgccagttgagctaggactt 13525174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 17500973 - 17500932
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    |||||||||||||||||||||||| ||||||||| ||||||||    
T  17500973 cggcctaacaatttcggcattttt-ccagttgagttaggactt 17500932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 24751799 - 24751758
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  24751799 cggcctaacaatttcggca-ttttgccagttgagctaggactt 24751758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 29212147 - 29212188
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  29212147 cggcctaacaatttcggca-ttttgccagttgagctaggactt 29212188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 32591018 - 32590977
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    |||||||||||||||| |||||| |||||||||||||||||||    
T  32591018 cggcctaacaatttcgacatttt-accagttgagctaggactt 32590977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 33096024 - 33095982
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    |||||||||||||||| ||||||| ||||||||| ||||||||    
T  33096024 cggcctaacaatttcgtcatttttgccagttgagttaggactt 33095982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 37312574 - 37312533
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||| ||||| |||||||||||||||||||    
T  37312574 cggcctaacaatttcggtatttt-accagttgagctaggactt 37312533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 46311525 - 46311566
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    |||||||||||||||| |||||| |||||||||||||||||||    
T  46311525 cggcctaacaatttcgacatttt-accagttgagctaggactt 46311566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 48191140 - 48191099
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||| ||||| |||||||||||||||||    
T  48191140 cggcctaacaatttcggca-ttttagcagttgagctaggactt 48191099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 50238922 - 50238963
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    |||||||||||||||| |||||| |||||||||||||||||||    
T  50238922 cggcctaacaatttcgacatttt-accagttgagctaggactt 50238963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 43
Target Start/End: Complemental strand, 23878991 - 23878951
Alignment:
Q  2 ggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||| ||||||||| ||||||||||||||||||    
T  23878991 ggcctaacaatttaggcattttt-ccagttgagctaggactt 23878951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 43
Target Start/End: Complemental strand, 31828445 - 31828404
Alignment:
Q  2 ggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||||||||  ||||||| ||||||||    
T  31828445 ggcctaacaatttcggcatttttataagttgagttaggactt 31828404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 43
Target Start/End: Original strand, 32961061 - 32961101
Alignment:
Q  2 ggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    |||||||||||||||||| |||| ||||||||||||||||||    
T  32961061 ggcctaacaatttcggca-ttttgccagttgagctaggactt 32961101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 1218453 - 1218488
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagcta 37  Q
    ||||||||||||||||||| |||||||||||||||||    
T  1218453 cggcctaacaatttcggca-ttttaccagttgagcta 1218488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 7251623 - 7251663
Alignment:
Q  3 gcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||||||  |||||||| ||||||||    
T  7251623 gcctaacaatttcggcatttttgtcagttgagttaggactt 7251663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 24910372 - 24910411
Alignment:
Q  3 gcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||| |||| ||||||||||||||||||    
T  24910372 gcctaacaatttcggca-ttttgccagttgagctaggactt 24910411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 160494 - 160452
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  160494 cggcctaacaatttcggcatttttaccagttgagctaggactt 160452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 46021513 - 46021555
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||||||||| |||||||||||||||||    
T  46021513 cggcctaacaatttcggcatttttatcagttgagctaggactt 46021555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 7 - 43
Target Start/End: Original strand, 12964581 - 12964617
Alignment:
Q  7 aacaatttcggcatttttaccagttgagctaggactt 43  Q
    |||||||||||||||||||||||||||||||||||||    
T  12964581 aacaatttcggcatttttaccagttgagctaggactt 12964617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 964355 - 964397
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    |||||||| ||||||||||||||||||| ||||||||||||||    
T  964355 cggcctaataatttcggcatttttaccaattgagctaggactt 964397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 1573923 - 1573964
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||| |||||||||||||||||||||||    
T  1573923 cggcctaacaatttcggca-ttttaccagttgagctaggactt 1573964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 1869862 - 1869820
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    |||||||||||| ||||||||||| ||||||||||||||||||    
T  1869862 cggcctaacaatatcggcatttttgccagttgagctaggactt 1869820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 4106600 - 4106559
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||||||| |||||||||||||||||||    
T  4106600 cggcctaacaatttcggcatttt-accagttgagctaggactt 4106559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 31717343 - 31717302
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||||||| |||||||||||||||||||    
T  31717343 cggcctaacaatttcggcatttt-accagttgagctaggactt 31717302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 33228746 - 33228704
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    |||||||||||||||| ||||||| ||||||||||||||||||    
T  33228746 cggcctaacaatttcgacatttttgccagttgagctaggactt 33228704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 40013310 - 40013268
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||||||||  |||||||||||||||||    
T  40013310 cggcctaacaatttcggcatttttgtcagttgagctaggactt 40013268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 34708718 - 34708678
Alignment:
Q  3 gcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    |||||||||| ||||||||||| ||||||||||||||||||    
T  34708718 gcctaacaatatcggcatttttgccagttgagctaggactt 34708678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 9234329 - 9234372
Alignment:
Q  1 cggcctaacaatttcggca-tttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||    
T  9234329 cggcctaacaatttcggcatttttttccagttgagctaggactt 9234372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 43
Target Start/End: Complemental strand, 46274991 - 46274952
Alignment:
Q  4 cctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    |||||||||||||||||||||||| |||||||||| ||||    
T  46274991 cctaacaatttcggcatttttaccggttgagctagaactt 46274952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 2354879 - 2354920
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  2354879 cggcctaacaatttcggca-ttttgccagttgagctaggactt 2354920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 3497599 - 3497640
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  3497599 cggcctaacaatttcggca-ttttgccagttgagctaggactt 3497640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 4887595 - 4887636
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  4887595 cggcctaacaatttcggca-ttttgccagttgagctaggactt 4887636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 6384600 - 6384641
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||| ||||| |||||||||||||||||||    
T  6384600 cggcctaacaatttcggtatttt-accagttgagctaggactt 6384641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 10061098 - 10061139
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  10061098 cggcctaacaatttcggca-ttttgccagttgagctaggactt 10061139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 10166916 - 10166875
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||| ||||| |||||||||||||||||    
T  10166916 cggcctaacaatttcggca-ttttatcagttgagctaggactt 10166875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 23789495 - 23789537
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    |||||||||||| ||||||||||| |||||||| |||||||||    
T  23789495 cggcctaacaatatcggcatttttgccagttgaactaggactt 23789537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 27396396 - 27396437
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  27396396 cggcctaacaatttcggca-ttttgccagttgagctaggactt 27396437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 33512843 - 33512802
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  33512843 cggcctaacaatttcggca-ttttgccagttgagctaggactt 33512802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 35157166 - 35157207
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  35157166 cggcctaacaatttcggca-ttttgccagttgagctaggactt 35157207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 38504605 - 38504647
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    |||||||| ||||||||||||||| ||| ||||||||||||||    
T  38504605 cggcctaaaaatttcggcatttttgccaattgagctaggactt 38504647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 43188576 - 43188534
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    |||||||||||||||||||||||| ||| ||||||||| ||||    
T  43188576 cggcctaacaatttcggcatttttgccacttgagctagtactt 43188534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 45236976 - 45236935
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  45236976 cggcctaacaatttcggca-ttttgccagttgagctaggactt 45236935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 47086382 - 47086424
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    |||||||||||||||| |||||||  |||||||||||||||||    
T  47086382 cggcctaacaatttcgacatttttgtcagttgagctaggactt 47086424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 48612563 - 48612522
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  48612563 cggcctaacaatttcggca-ttttgccagttgagctaggactt 48612522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 48729766 - 48729807
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  48729766 cggcctaacaatttcggca-ttttgccagttgagctaggactt 48729807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 43133187 - 43133227
Alignment:
Q  3 gcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||| |||||| ||| ||||||||||||||    
T  43133187 gcctaacaatttcggtatttttgccatttgagctaggactt 43133227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 16496734 - 16496776
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  16496734 cggcctaacaatttcggcatttttgccagttgagctaggactt 16496776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 9949233 - 9949269
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagcta 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  9949233 cggcctaacaatttcggcatttttaccagttgagcta 9949269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 43
Target Start/End: Original strand, 2018847 - 2018886
Alignment:
Q  4 cctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  2018847 cctaacaatttcgacatttttaccagttgagctaggactt 2018886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 1266824 - 1266866
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||||||||||| |||||| ||||||||    
T  1266824 cggcctaacaatttcggcatttttaccggttgagttaggactt 1266866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 31444372 - 31444414
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    |||||||||||||||||||||||| || |||||||||||||||    
T  31444372 cggcctaacaatttcggcatttttgccggttgagctaggactt 31444414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 43
Target Start/End: Complemental strand, 10330850 - 10330809
Alignment:
Q  2 ggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||| ||||||||| ||||||||||||||||||    
T  10330850 ggcctaacaattttggcatttttgccagttgagctaggactt 10330809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 7099009 - 7098971
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctagga 40  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  7099009 cggcctaacaatttcggcattttt-ccagttgagctagga 7098971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 1241641 - 1241600
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  1241641 cggcctaacaatttcggca-ttttgccagttgagctaggactt 1241600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 2314681 - 2314722
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  2314681 cggcctaacaatttcggca-ttttgccagttgagctaggactt 2314722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 4128991 - 4128950
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||| ||||| |||||||||||||||||||    
T  4128991 cggcctaacaatttcggtatttt-accagttgagctaggactt 4128950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 7098852 - 7098811
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    |||||||||||||||| |||||| |||||||||||||||||||    
T  7098852 cggcctaacaatttcgacatttt-accagttgagctaggactt 7098811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 8448224 - 8448265
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  8448224 cggcctaacaatttcggca-ttttgccagttgagctaggactt 8448265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 8457028 - 8457069
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  8457028 cggcctaacaatttcggca-ttttgccagttgagctaggactt 8457069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 8487635 - 8487676
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||| ||||||||||||||||| |||||    
T  8487635 cggcctaacaatttcggca-ttttaccagttgagctaagactt 8487676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 8977201 - 8977159
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    |||||||||||||| ||||||||| |||||||||||| |||||    
T  8977201 cggcctaacaatttgggcatttttgccagttgagctaagactt 8977159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 12795101 - 12795142
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||| |||||| ||||||||||||||||    
T  12795101 cggcctaacaatttcggca-ttttactagttgagctaggactt 12795142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 15953276 - 15953239
Alignment:
Q  5 ctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  15953276 ctaacaatttcggcatttt-accagttgagctaggactt 15953239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 17534605 - 17534646
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  17534605 cggcctaacaatttcggca-ttttgccagttgagctaggactt 17534646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 18861849 - 18861890
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  18861849 cggcctaacaatttcggca-ttttgccagttgagctaggactt 18861890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 31205265 - 31205306
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  31205265 cggcctaacaatttcggca-ttttgccagttgagctaggactt 31205306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 32643810 - 32643851
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||| |||||||||||||| ||||||||    
T  32643810 cggcctaacaatttcggca-ttttaccagttgagttaggactt 32643851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 43
Target Start/End: Complemental strand, 4891053 - 4891013
Alignment:
Q  2 ggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||||||| |||||||||||| |||||    
T  4891053 ggcctaacaatttcggcattttt-ccagttgagctaagactt 4891013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 40
Target Start/End: Original strand, 5626145 - 5626180
Alignment:
Q  4 cctaacaatttcggcatttttaccagttgagctagga 40  Q
    ||||||||||||||||||||| |||||||||||||||    
T  5626145 cctaacaatttcggcattttt-ccagttgagctagga 5626180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 8795491 - 8795526
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagcta 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  8795491 cggcctaacaatttcggcattttt-ccagttgagcta 8795526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 13507394 - 13507433
Alignment:
Q  3 gcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||| |||| ||||||||||||||||||    
T  13507394 gcctaacaatttcggca-ttttcccagttgagctaggactt 13507433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 28533485 - 28533445
Alignment:
Q  3 gcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    |||||||||||||||||||||| ||| |||| |||||||||    
T  28533485 gcctaacaatttcggcatttttgccaattgaactaggactt 28533445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 31747068 - 31747103
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagcta 37  Q
    ||||||||||||||||||| |||||||||||||||||    
T  31747068 cggcctaacaatttcggca-ttttaccagttgagcta 31747103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 32107919 - 32107958
Alignment:
Q  3 gcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||| |||| ||||||||||||||||||    
T  32107919 gcctaacaatttcggca-ttttgccagttgagctaggactt 32107958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 8595569 - 8595611
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  8595569 cggcctaacaatttcggcatttttgccagttgagctaggactt 8595611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 21728707 - 21728665
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  21728707 cggcctaacaatttcggcatttttgccagttgagctaggactt 21728665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 23074726 - 23074768
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  23074726 cggcctaacaatttcggcatttttgccagttgagctaggactt 23074768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 43
Target Start/End: Original strand, 22792195 - 22792234
Alignment:
Q  4 cctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  22792195 cctaacaatttcggcatttttgccagttgagctaggactt 22792234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 1833401 - 1833443
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    |||||||||||||||||||||||| |||||||||||| |||||    
T  1833401 cggcctaacaatttcggcatttttgccagttgagctatgactt 1833443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 30528028 - 30527986
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||||||| ||| |||||||||||||||    
T  30528028 cggcctaacaatttcggcattttcaccggttgagctaggactt 30527986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 30568368 - 30568326
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||||||| ||| |||||||||||||||    
T  30568368 cggcctaacaatttcggcattttcaccggttgagctaggactt 30568326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 40318867 - 40318909
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    |||||||||||||||||||||||| |||||||||||| |||||    
T  40318867 cggcctaacaatttcggcatttttgccagttgagctatgactt 40318909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 41408673 - 41408631
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    |||||||||||||||||||||||| |||||||||||| |||||    
T  41408673 cggcctaacaatttcggcatttttgccagttgagctatgactt 41408631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 12769210 - 12769249
Alignment:
Q  4 cctaacaatttcggcatttttaccagttgagctaggacttt 44  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  12769210 cctaacaatttcggcatttt-accagttgagctaggacttt 12769249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 34856627 - 34856592
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagct 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  34856627 cggcctaacaatttcggcatttttgccagttgagct 34856592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 1244263 - 1244304
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  1244263 cggcctaacaatttcggca-ttttgccagttgagctaggactt 1244304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 1277484 - 1277442
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||||||||  ||| |||||||||||||    
T  1277484 cggcctaacaatttcggcatttttggcagctgagctaggactt 1277442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 2103072 - 2103031
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  2103072 cggcctaacaatttcggca-ttttgccagttgagctaggactt 2103031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 4165005 - 4164964
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  4165005 cggcctaacaatttcggca-ttttgccagttgagctaggactt 4164964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 4617848 - 4617889
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    |||||||||||||||| |||||| |||||||||||||||||||    
T  4617848 cggcctaacaatttcgacatttt-accagttgagctaggactt 4617889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 6672287 - 6672246
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  6672287 cggcctaacaatttcggca-ttttgccagttgagctaggactt 6672246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 9902583 - 9902624
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  9902583 cggcctaacaatttcggca-ttttgccagttgagctaggactt 9902624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 10393584 - 10393625
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    |||||||| ||||||||||||||| ||||||||||||||||||    
T  10393584 cggcctaataatttcggcattttt-ccagttgagctaggactt 10393625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 12878200 - 12878241
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  12878200 cggcctaacaatttcggca-ttttgccagttgagctaggactt 12878241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 17869206 - 17869247
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  17869206 cggcctaacaatttcggca-ttttgccagttgagctaggactt 17869247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 18473960 - 18473919
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  18473960 cggcctaacaatttcggca-ttttgccagttgagctaggactt 18473919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 23311255 - 23311296
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  23311255 cggcctaacaatttcggca-ttttgccagttgagctaggactt 23311296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 25328386 - 25328427
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  25328386 cggcctaacaatttcggca-ttttgccagttgagctaggactt 25328427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 26526559 - 26526517
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||| |||||| |||||||||||| |||||    
T  26526559 cggcctaacaatttcggtatttttgccagttgagctaagactt 26526517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 27004051 - 27004088
Alignment:
Q  5 ctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  27004051 ctaacaatttcggcatttt-accagttgagctaggactt 27004088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 28143314 - 28143355
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  28143314 cggcctaacaatttcggca-ttttgccagttgagctaggactt 28143355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 29119652 - 29119611
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  29119652 cggcctaacaatttcggca-ttttgccagttgagctaggactt 29119611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 33617142 - 33617101
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    |||||||||||| |||||||||| |||||||||||||||||||    
T  33617142 cggcctaacaatgtcggcatttt-accagttgagctaggactt 33617101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 36569325 - 36569284
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  36569325 cggcctaacaatttcggca-ttttgccagttgagctaggactt 36569284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 36727035 - 36726994
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  36727035 cggcctaacaatttcggca-ttttgccagttgagctaggactt 36726994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 36790397 - 36790439
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    |||||||| ||||||||||||||| |||||| |||||||||||    
T  36790397 cggcctaataatttcggcatttttgccagttaagctaggactt 36790439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 39151008 - 39151049
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    |||||||||||||||| |||||| |||||||||||||||||||    
T  39151008 cggcctaacaatttcgacatttt-accagttgagctaggactt 39151049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 40596003 - 40595962
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  40596003 cggcctaacaatttcggca-ttttgccagttgagctaggactt 40595962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 41562504 - 41562463
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  41562504 cggcctaacaatttcggca-ttttgccagttgagctaggactt 41562463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 43
Target Start/End: Original strand, 41215322 - 41215359
Alignment:
Q  6 taacaatttcggcatttttaccagttgagctaggactt 43  Q
    |||||||||| ||||||||||| |||||||||||||||    
T  41215322 taacaatttcagcatttttacctgttgagctaggactt 41215359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 12262914 - 12262874
Alignment:
Q  4 cctaacaatttcggcatttttaccagttgagctaggacttt 44  Q
    ||||||||||||||||||||| || ||||| ||||||||||    
T  12262914 cctaacaatttcggcatttttgccggttgaactaggacttt 12262874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 39527976 - 39527937
Alignment:
Q  3 gcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||| ||||||||||||| |||||||||    
T  39527976 gcctaacaatttcggca-ttttaccagttgaactaggactt 39527937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 24870643 - 24870601
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  24870643 cggcctaacaatttcggcatttttgccagttgagctaggactt 24870601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 28033238 - 28033196
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggacttt 44  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  28033238 cggcctaacaatttcggcatttt-accagttgagctaggacttt 28033196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 13632136 - 13632094
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    |||||||||||||||| ||||||| ||||||||||||||||||    
T  13632136 cggcctaacaatttcgacatttttgccagttgagctaggactt 13632094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 35273388 - 35273430
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    |||||||||||||||| ||||||| ||||||||||||||||||    
T  35273388 cggcctaacaatttcgacatttttgccagttgagctaggactt 35273430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 21156039 - 21156079
Alignment:
Q  3 gcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||| |||||||||||||||| ||||||||||||||||||    
T  21156039 gcctagcaatttcggcatttttgccagttgagctaggactt 21156079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 43
Target Start/End: Original strand, 55853399 - 55853438
Alignment:
Q  4 cctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||| ||||||||| ||||||||||||||||||    
T  55853399 cctaacaattttggcatttttgccagttgagctaggactt 55853438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 1033531 - 1033572
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  1033531 cggcctaacaatttcggca-ttttgccagttgagctaggactt 1033572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 1982607 - 1982566
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  1982607 cggcctaacaatttcggca-ttttgccagttgagctaggactt 1982566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 5397022 - 5397063
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  5397022 cggcctaacaatttcggca-ttttgccagttgagctaggactt 5397063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 9569521 - 9569480
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  9569521 cggcctaacaatttcggca-ttttgccagttgagctaggactt 9569480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 9749164 - 9749206
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    |||| ||||||||||||||||||||||| |||| |||||||||    
T  9749164 cggcataacaatttcggcatttttaccaattgaactaggactt 9749206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 12821211 - 12821170
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  12821211 cggcctaacaatttcggca-ttttgccagttgagctaggactt 12821170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 23974724 - 23974765
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  23974724 cggcctaacaatttcggca-ttttgccagttgagctaggactt 23974765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 30044666 - 30044707
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  30044666 cggcctaacaatttcggca-ttttgccagttgagctaggactt 30044707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 31436000 - 31436041
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||| ||||||||||||| |||||||||    
T  31436000 cggcctaacaatttcggca-ttttaccagttgaactaggactt 31436041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 33840666 - 33840624
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    |||||||| ||||||||||||||| | ||||||||||||||||    
T  33840666 cggcctaataatttcggcatttttgctagttgagctaggactt 33840624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 282
Target Start/End: Original strand, 35595146 - 35595184
Alignment:
Q  244 ttgtatactcaagttatcaaacttggataatgtactttc 282  Q
    ||||||||| ||||||||||||||||||| |||||||||    
T  35595146 ttgtatacttaagttatcaaacttggatattgtactttc 35595184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 35828320 - 35828279
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  35828320 cggcctaacaatttcggca-ttttgccagttgagctaggactt 35828279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 37166184 - 37166143
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  37166184 cggcctaacaatttcggca-ttttgccagttgagctaggactt 37166143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 37340189 - 37340231
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    |||||||||||||||| |||||||| ||||||| |||||||||    
T  37340189 cggcctaacaatttcgacatttttatcagttgaactaggactt 37340231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 42154220 - 42154261
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  42154220 cggcctaacaatttcggca-ttttgccagttgagctaggactt 42154261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 42856609 - 42856568
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  42856609 cggcctaacaatttcggca-ttttgccagttgagctaggactt 42856568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 46343375 - 46343333
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||| ||||  |||||||||||||||||    
T  46343375 cggcctaacaatttcggcacttttgtcagttgagctaggactt 46343333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 46488199 - 46488240
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  46488199 cggcctaacaatttcggca-ttttgccagttgagctaggactt 46488240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 47462118 - 47462159
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  47462118 cggcctaacaatttcggca-ttttgccagttgagctaggactt 47462159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 49535931 - 49535890
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  49535931 cggcctaacaatttcggca-ttttgccagttgagctaggactt 49535890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 49882791 - 49882832
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  49882791 cggcctaacaatttcggca-ttttgccagttgagctaggactt 49882832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 54907974 - 54908015
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  54907974 cggcctaacaatttcggca-ttttgccagttgagctaggactt 54908015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 43
Target Start/End: Original strand, 26186220 - 26186261
Alignment:
Q  2 ggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||| ||||||||| ||||||||||| ||||    
T  26186220 ggcctaacaatttcgacatttttactagttgagctagaactt 26186261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 43
Target Start/End: Original strand, 50981781 - 50981822
Alignment:
Q  2 ggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    |||||||||||||||||||||||  |||||||| ||||||||    
T  50981781 ggcctaacaatttcggcatttttgtcagttgagttaggactt 50981822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 31010029 - 31010068
Alignment:
Q  3 gcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||| ||||||||||||||||| |||||    
T  31010029 gcctaacaatttcggca-ttttaccagttgagctaagactt 31010068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 270403 - 270445
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  270403 cggcctaacaatttcggcatttttgccagttgagctaggactt 270445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 7204590 - 7204632
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  7204590 cggcctaacaatttcggcatttttgccagttgagctaggactt 7204632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 43
Target Start/End: Original strand, 17540159 - 17540200
Alignment:
Q  2 ggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||||||||| ||||||||||||||||    
T  17540159 ggcctaacaatttcggcatttttactagttgagctaggactt 17540200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 49632599 - 49632559
Alignment:
Q  3 gcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  49632599 gcctaacaatttcggcatttttaccagttgaactaggactt 49632559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 10430421 - 10430463
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||||||||  |||||||||||||||||    
T  10430421 cggcctaacaatttcggcatttttgtcagttgagctaggactt 10430463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 17068198 - 17068157
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||||||| |||||||||||||||||||    
T  17068198 cggcctaacaatttcggcatttt-accagttgagctaggactt 17068157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 26261375 - 26261416
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  26261375 cggcctaacaatttcggcattttt-ccagttgagctaggactt 26261416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 37186899 - 37186941
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    |||| ||||||||||||||||||||||||||||||||| ||||    
T  37186899 cggcttaacaatttcggcatttttaccagttgagctagaactt 37186941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 39606451 - 39606409
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    |||||||||||| ||||||||||| ||||||||||||||||||    
T  39606451 cggcctaacaatatcggcatttttgccagttgagctaggactt 39606409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 3628699 - 3628659
Alignment:
Q  3 gcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||||||| |||||||| ||||||||    
T  3628699 gcctaacaatttcggcatttttatcagttgagttaggactt 3628659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 43
Target Start/End: Complemental strand, 5598344 - 5598306
Alignment:
Q  4 cctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  5598344 cctaacaatttcggcattttt-ccagttgagctaggactt 5598306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 43
Target Start/End: Original strand, 15331147 - 15331185
Alignment:
Q  4 cctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  15331147 cctaacaatttcggcattttt-ccagttgagctaggactt 15331185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 43
Target Start/End: Original strand, 19279937 - 19279975
Alignment:
Q  4 cctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  19279937 cctaacaatttcggcatttt-accagttgagctaggactt 19279975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 43
Target Start/End: Original strand, 23225375 - 23225414
Alignment:
Q  4 cctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||| | ||||||||||||||||||||||||||    
T  23225375 cctaacaattttgacatttttaccagttgagctaggactt 23225414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 43
Target Start/End: Complemental strand, 41651116 - 41651078
Alignment:
Q  4 cctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  41651116 cctaacaatttcggcatttt-accagttgagctaggactt 41651078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 10635535 - 10635494
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  10635535 cggcctaacaatttcggca-ttttgccagttgagctaggactt 10635494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 19338260 - 19338301
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  19338260 cggcctaacaatttcggca-ttttgccagttgagctaggactt 19338301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 24119702 - 24119661
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  24119702 cggcctaacaatttcggca-ttttgccagttgagctaggactt 24119661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 28999420 - 28999379
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  28999420 cggcctaacaatttcggca-ttttgccagttgagctaggactt 28999379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 29005136 - 29005095
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  29005136 cggcctaacaatttcggca-ttttgccagttgagctaggactt 29005095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 34271102 - 34271144
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    |||||||||||||||| ||||||||| ||||||||||| ||||    
T  34271102 cggcctaacaatttcgtcatttttactagttgagctagtactt 34271144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 40809295 - 40809336
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  40809295 cggcctaacaatttcggca-ttttgccagttgagctaggactt 40809336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 40958656 - 40958697
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  40958656 cggcctaacaatttcggca-ttttgccagttgagctaggactt 40958697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 42631067 - 42631108
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  42631067 cggcctaacaatttcggca-ttttgccagttgagctaggactt 42631108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 43086553 - 43086594
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  43086553 cggcctaacaatttcggca-ttttgccagttgagctaggactt 43086594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 43676106 - 43676147
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  43676106 cggcctaacaatttcggca-ttttgccagttgagctaggactt 43676147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 45611543 - 45611585
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||||||||  |||||||||||| ||||    
T  45611543 cggcctaacaatttcggcatttttgtcagttgagctagaactt 45611585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 48314213 - 48314172
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  48314213 cggcctaacaatttcggca-ttttgccagttgagctaggactt 48314172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 48392002 - 48391961
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  48392002 cggcctaacaatttcggca-ttttgccagttgagctaggactt 48391961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 49500907 - 49500866
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  49500907 cggcctaacaatttcggca-ttttgccagttgagctaggactt 49500866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 43
Target Start/End: Original strand, 4628047 - 4628088
Alignment:
Q  2 ggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    |||||||||||||| ||||||||  |||||||||||||||||    
T  4628047 ggcctaacaatttcagcatttttgtcagttgagctaggactt 4628088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 43
Target Start/End: Original strand, 16867475 - 16867516
Alignment:
Q  2 ggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    |||||||| |||||||||||||| ||||||||| ||||||||    
T  16867475 ggcctaacgatttcggcatttttgccagttgagttaggactt 16867516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 43
Target Start/End: Original strand, 38886472 - 38886512
Alignment:
Q  2 ggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    |||||||||||||||| ||||| |||||||||||||||||||    
T  38886472 ggcctaacaatttcggtatttt-accagttgagctaggactt 38886512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 36; Significance: 0.00000000003; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 43
Target Start/End: Original strand, 11543884 - 11543923
Alignment:
Q  4 cctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  11543884 cctaacaatttcggcatttttgccagttgagctaggactt 11543923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 12236167 - 12236126
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||||||| |||||||||||||||||||    
T  12236167 cggcctaacaatttcggcatttt-accagttgagctaggactt 12236126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 39070065 - 39070024
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||||||| |||||||||||||||||||    
T  39070065 cggcctaacaatttcggcatttt-accagttgagctaggactt 39070024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 43
Target Start/End: Original strand, 19134599 - 19134640
Alignment:
Q  2 ggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||| ||||||| ||||||||||||||||||    
T  19134599 ggcctaacaatttcgacattttttccagttgagctaggactt 19134640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 2287391 - 2287432
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  2287391 cggcctaacaatttcggca-ttttgccagttgagctaggactt 2287432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 7975096 - 7975137
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  7975096 cggcctaacaatttcggca-ttttgccagttgagctaggactt 7975137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 10392691 - 10392650
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    |||||||||||| |||||||||| |||||||||||||||||||    
T  10392691 cggcctaacaatgtcggcatttt-accagttgagctaggactt 10392650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 15897260 - 15897219
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  15897260 cggcctaacaatttcggca-ttttgccagttgagctaggactt 15897219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 20251567 - 20251608
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  20251567 cggcctaacaatttcggca-ttttgccagttgagctaggactt 20251608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 22999117 - 22999079
Alignment:
Q  5 ctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    |||||||||| |||||||||||| |||||||||||||||    
T  22999117 ctaacaattttggcatttttacccgttgagctaggactt 22999079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 23080180 - 23080221
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  23080180 cggcctaacaatttcggca-ttttgccagttgagctaggactt 23080221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 23497594 - 23497635
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||| ||||||||||||| |||||||||    
T  23497594 cggcctaacaatttcggca-ttttaccagttgaactaggactt 23497635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 25510384 - 25510425
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||| ||||| |||||||||||||||||||    
T  25510384 cggcctaacaatttcggtatttt-accagttgagctaggactt 25510425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 31516287 - 31516328
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    |||||||||||||||||||||||| ||||||||| ||||||||    
T  31516287 cggcctaacaatttcggcattttt-ccagttgagttaggactt 31516328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 32023298 - 32023257
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  32023298 cggcctaacaatttcggca-ttttgccagttgagctaggactt 32023257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 34242533 - 34242574
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||| ||||| |||||||||||||||||    
T  34242533 cggcctaacaatttcggca-ttttatcagttgagctaggactt 34242574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 34667090 - 34667049
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  34667090 cggcctaacaatttcggca-ttttgccagttgagctaggactt 34667049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 35687868 - 35687909
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||| ||||| |||||||||||||||||    
T  35687868 cggcctaacaatttcggca-ttttatcagttgagctaggactt 35687909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 36754823 - 36754864
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  36754823 cggcctaacaatttcggca-ttttgccagttgagctaggactt 36754864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 38490482 - 38490523
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  38490482 cggcctaacaatttcggca-ttttgccagttgagctaggactt 38490523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 42007297 - 42007338
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    |||||||||||||||| |||||| |||||||||||||||||||    
T  42007297 cggcctaacaatttcgacatttt-accagttgagctaggactt 42007338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 42160339 - 42160380
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  42160339 cggcctaacaatttcggca-ttttgccagttgagctaggactt 42160380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 43461416 - 43461457
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    |||||||||||||||| |||||| |||||||||||||||||||    
T  43461416 cggcctaacaatttcgacatttt-accagttgagctaggactt 43461457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 12221226 - 12221267
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggact 42  Q
    |||||||||||||||  ||||||| |||||||||||||||||    
T  12221226 cggcctaacaatttcatcatttttgccagttgagctaggact 12221267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 43
Target Start/End: Complemental strand, 33607088 - 33607048
Alignment:
Q  2 ggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    |||||||||||||||||| |||| ||||||||||||||||||    
T  33607088 ggcctaacaatttcggca-ttttgccagttgagctaggactt 33607048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 32517902 - 32517942
Alignment:
Q  3 gcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    |||||||||||||| |||||||| ||||||| |||||||||    
T  32517902 gcctaacaatttcgacatttttatcagttgaactaggactt 32517942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 34481755 - 34481794
Alignment:
Q  3 gcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||| |||| ||||||||||||||||||    
T  34481755 gcctaacaatttcggca-ttttgccagttgagctaggactt 34481794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 39417489 - 39417449
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggac 41  Q
    ||||||||||||||||| ||||||  |||||||||||||||    
T  39417489 cggcctaacaatttcggtatttttgtcagttgagctaggac 39417449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 39395 - 39436
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||| |||||||||||||||||||||||    
T  39395 cggcctaacaatttcggca-ttttaccagttgagctaggactt 39436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 35; Significance: 0.0000000001; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 1522739 - 1522697
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||| |||||| ||||||||||||||||||    
T  1522739 cggcctaacaatttcggtatttttgccagttgagctaggactt 1522697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 7772132 - 7772173
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||| |||||||||||||||||||||||    
T  7772132 cggcctaacaatttcggca-ttttaccagttgagctaggactt 7772173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 11100370 - 11100411
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  11100370 cggcctaacaatttcggcattttt-ccagttgagctaggactt 11100411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 25063386 - 25063344
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    |||||||||||||||||||||||| |||||||| |||||||||    
T  25063386 cggcctaacaatttcggcatttttgccagttgaactaggactt 25063344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 25199092 - 25199051
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||||||| |||||||||||||||||||    
T  25199092 cggcctaacaatttcggcatttt-accagttgagctaggactt 25199051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 26675603 - 26675562
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||||||| |||||||||||||||||||    
T  26675603 cggcctaacaatttcggcatttt-accagttgagctaggactt 26675562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 26738017 - 26737976
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||||||| |||||||||||||||||||    
T  26738017 cggcctaacaatttcggcatttt-accagttgagctaggactt 26737976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 36442769 - 36442811
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||||||||| |||||||| ||||||||    
T  36442769 cggcctaacaatttcggcatttttatcagttgagttaggactt 36442811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 43
Target Start/End: Original strand, 11637635 - 11637676
Alignment:
Q  2 ggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||| ||||||| ||||||||||||||||||    
T  11637635 ggcctaacaatttcgacattttttccagttgagctaggactt 11637676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 43
Target Start/End: Complemental strand, 40418173 - 40418132
Alignment:
Q  2 ggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    |||||||||||||| |||||||||||||||||||||| ||||    
T  40418173 ggcctaacaatttcagcatttttaccagttgagctagaactt 40418132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 43
Target Start/End: Complemental strand, 42158600 - 42158563
Alignment:
Q  6 taacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  42158600 taacaatttcggcatttttaccaattgagctaggactt 42158563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 14243743 - 14243704
Alignment:
Q  3 gcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  14243743 gcctaacaatttcggcatttt-accagttgagctaggactt 14243704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 16816872 - 16816833
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctagga 40  Q
    |||||||||||||||| ||||||| |||||||||||||||    
T  16816872 cggcctaacaatttcgacatttttgccagttgagctagga 16816833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 37953829 - 37953787
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggacttt 44  Q
    |||||||||||||||| ||||||| |||||||||||||||||||    
T  37953829 cggcctaacaatttcgacattttt-ccagttgagctaggacttt 37953787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 40216826 - 40216783
Alignment:
Q  1 cggcctaacaattt-cggcatttttaccagttgagctaggactt 43  Q
    |||||||||||||| |||||||||| ||||||||||||||||||    
T  40216826 cggcctaacaattttcggcatttttgccagttgagctaggactt 40216783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 2733662 - 2733621
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  2733662 cggcctaacaatttcggca-ttttgccagttgagctaggactt 2733621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 4430817 - 4430858
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  4430817 cggcctaacaatttcggca-ttttgccagttgagctaggactt 4430858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 4977116 - 4977157
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  4977116 cggcctaacaatttcggca-ttttgccagttgagctaggactt 4977157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 6317346 - 6317305
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  6317346 cggcctaacaatttcggca-ttttgccagttgagctaggactt 6317305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 24242667 - 24242709
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    |||||||||||||||||||||||| || |||||| ||||||||    
T  24242667 cggcctaacaatttcggcatttttgccggttgagttaggactt 24242709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 26690740 - 26690699
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  26690740 cggcctaacaatttcggca-ttttgccagttgagctaggactt 26690699  T

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Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 27849824 - 27849866
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||||||||  |||||||| ||||||||    
T  27849824 cggcctaacaatttcggcatttttgtcagttgagttaggactt 27849866  T

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Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 33067470 - 33067511
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  33067470 cggcctaacaatttcggca-ttttgccagttgagctaggactt 33067511  T

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Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 37295172 - 37295131
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  37295172 cggcctaacaatttcggca-ttttgccagttgagctaggactt 37295131  T

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Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 38070563 - 38070604
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  38070563 cggcctaacaatttcggca-ttttgccagttgagctaggactt 38070604  T

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Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 41562488 - 41562447
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    |||||||||||||||| |||||| |||||||||||||||||||    
T  41562488 cggcctaacaatttcgacatttt-accagttgagctaggactt 41562447  T

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Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 44814909 - 44814868
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  44814909 cggcctaacaatttcggca-ttttgccagttgagctaggactt 44814868  T

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Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 40
Target Start/End: Original strand, 3673928 - 3673964
Alignment:
Q  4 cctaacaatttcggcatttttaccagttgagctagga 40  Q
    ||||||||||||| ||||||| |||||||||||||||    
T  3673928 cctaacaatttcgacatttttgccagttgagctagga 3673964  T

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Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 16501693 - 16501653
Alignment:
Q  3 gcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    |||||||||| || |||||||| ||||||||||||||||||    
T  16501693 gcctaacaatatcagcatttttgccagttgagctaggactt 16501653  T

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Target: scaffold0633 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0633
Description:

Target: scaffold0633; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 43
Target Start/End: Original strand, 3880 - 3918
Alignment:
Q  4 cctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  3880 cctaacaatttcggcatttt-accagttgagctaggactt 3918  T

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Target: scaffold0457 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0457
Description:

Target: scaffold0457; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 6825 - 6784
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  6825 cggcctaacaatttcggca-ttttgccagttgagctaggactt 6784  T

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Target: scaffold0432 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 9413 - 9372
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  9413 cggcctaacaatttcggca-ttttgccagttgagctaggactt 9372  T

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Target: scaffold0402 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0402
Description:

Target: scaffold0402; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 1323 - 1364
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  1323 cggcctaacaatttcggca-ttttgccagttgagctaggactt 1364  T

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Target: scaffold0287 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0287
Description:

Target: scaffold0287; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 1140 - 1181
Alignment:
Q  1 cggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  1140 cggcctaacaatttcggca-ttttgccagttgagctaggactt 1181  T

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Target: scaffold0013 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 43
Target Start/End: Complemental strand, 90614 - 90574
Alignment:
Q  2 ggcctaacaatttcggcatttttaccagttgagctaggactt 43  Q
    |||||||||||||||||| |||| ||||||||||||||||||    
T  90614 ggcctaacaatttcggca-ttttgccagttgagctaggactt 90574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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