View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19169_high_13 (Length: 202)
Name: NF19169_high_13
Description: NF19169
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19169_high_13 |
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Alignment Details
Target: chr2 (Bit Score: 140; Significance: 2e-73; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 15 - 186
Target Start/End: Complemental strand, 24591073 - 24590901
Alignment:
| Q |
15 |
cataggaaaagaggaaaacagaaagatgacatatttctggtgagnnnnnnnccaaagaggttttatggcacaacaagttccacgtttttaactcaaaaac |
114 |
Q |
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| T |
24591073 |
cataggaaaagaggaaaacagaaagatgacatatttctggtgagaaaaaaacgaaagaggttttatggcacaacaagttccacgtttttaactcaaaaac |
24590974 |
T |
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| Q |
115 |
agtttttt-aacttagcactggtttccaatgaagggtatgaaaagtacaaaggagtggaactttgtaacggtt |
186 |
Q |
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|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24590973 |
agtttttttaacttagcactggtttccaatgaagggtatgaaaagtacaaaggagtggaactttgtaacggtt |
24590901 |
T |
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