View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19169_low_12 (Length: 236)
Name: NF19169_low_12
Description: NF19169
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19169_low_12 |
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Alignment Details
Target: chr1 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 36726837 - 36727057
Alignment:
| Q |
1 |
ttcaattgtatccgatactcctaattattttataaaggtcccgagttcaattcttaagtgtggtattgtgttggaaaatatgcatgctttaagatagtaa |
100 |
Q |
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| T |
36726837 |
ttcaattgtatccgatactcctaattattttataaaggtcccgagttcaattcttaagtgtggtattgtgttggaaactatgcatgctttaagatagtaa |
36726936 |
T |
|
| Q |
101 |
tttcgctttaaagcatctataattatcttcaacaacaaacttcaaactccaggtgcttcatcacacatagcttagcttggattatgcccaagacgagaac |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36726937 |
tttcgctttaaagcatctataattatcttcaacaacaaacttcaaactccaggtgcttcatcacacatagcttagcttggattatgcccaagacgagaac |
36727036 |
T |
|
| Q |
201 |
ttagaaaaataccctttggat |
221 |
Q |
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||||||||||||||||||||| |
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| T |
36727037 |
ttagaaaaataccctttggat |
36727057 |
T |
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