View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1916_high_32 (Length: 224)
Name: NF1916_high_32
Description: NF1916
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1916_high_32 |
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Alignment Details
Target: chr3 (Bit Score: 162; Significance: 1e-86; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 20 - 204
Target Start/End: Original strand, 32136915 - 32137104
Alignment:
| Q |
20 |
tggaagccccactacactagctatcacaatcacaattaacgatctttggcggcgcctattaaattttgattaaattttccactctatat-----gttttt |
114 |
Q |
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| T |
32136915 |
tggaagccccactacactagctatcacaatcacaattaacgatctttggcggcgcctattaatttttgattaaattttccactctatatagcatgttttt |
32137014 |
T |
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| Q |
115 |
aattttgtttcactaattattatatatttctttcttatcactaggatcctctatttaaagttcactgcacaaaggttcagttaggaggct |
204 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32137015 |
gattttgtttcactaattattatatatttctttcttatcactaggatcctctatttaaagttcactgcacaaaggttcagttaggaggct |
32137104 |
T |
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