View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1916_high_35 (Length: 204)
Name: NF1916_high_35
Description: NF1916
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1916_high_35 |
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Alignment Details
Target: chr2 (Bit Score: 142; Significance: 1e-74; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 16 - 188
Target Start/End: Original strand, 9203151 - 9203324
Alignment:
| Q |
16 |
aatacttagaagttttctaatgaatgttgatgctaaagcnnnnnnnn-ttcaagaccaatatacatgtggagtgagtataagaataaaacaaattttgga |
114 |
Q |
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||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
9203151 |
aatacttagaagttttctaatgaatgttgatgctaaagcaaagaaaaattcaagaccaatatacatgtggagtgagtataagaataaaacaaattttgga |
9203250 |
T |
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| Q |
115 |
tggaaattttcttttttactatagagtggaattagtaaagctaatatgataatcattgttgcagatgcataggt |
188 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
9203251 |
tggaaattttcttttttactatagagtggaattagtaaagctaatatgataatcattgttgcagatgcataggt |
9203324 |
T |
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