View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19174_high_6 (Length: 307)
Name: NF19174_high_6
Description: NF19174
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19174_high_6 |
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Alignment Details
Target: chr3 (Bit Score: 245; Significance: 1e-136; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 18 - 294
Target Start/End: Original strand, 48320374 - 48320650
Alignment:
| Q |
18 |
ccatagtaattttcttgggatggtggggtggaaaaaagatcattaaagttactaactattccaactccacgaagattttggtggggtccattatttttat |
117 |
Q |
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| T |
48320374 |
ccatagtaattttcttgggatggtggactggaaaaaacatcattaaagttactaactattccaactccttgaagattttggtggggtccattatttttat |
48320473 |
T |
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| Q |
118 |
taatggataaattgatatgctgagtttgttgggacaatgaagtgggacccacattgttgttattgttatcaatggataaatatgctagtgttgggttact |
217 |
Q |
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| T |
48320474 |
taatggataaattgatatgctgagtttgttgggacaatgaagtgggacccacattgttgttattgttatcaatggataaatctgctagtgttgggttact |
48320573 |
T |
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| Q |
218 |
catattgaagaaacttgggtcaagggaattttcgaagcagtcaaacatgagatcttcatcttcaatacttggattca |
294 |
Q |
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| T |
48320574 |
catattgaagaaacttgggtcaagggaattttcgaaacagtcaaacatgagatcttcatcttccatacttggattca |
48320650 |
T |
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