View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19175_high_11 (Length: 627)

Name: NF19175_high_11
Description: NF19175
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19175_high_11
NF19175_high_11
[»] chr8 (50 HSPs)
chr8 (405-612)||(45281000-45281209)
chr8 (405-610)||(4810565-4810769)
chr8 (405-522)||(32798434-32798552)
chr8 (405-522)||(42098659-42098777)
chr8 (444-557)||(24192531-24192644)
chr8 (496-579)||(26696689-26696772)
chr8 (483-566)||(34504533-34504616)
chr8 (438-524)||(32695174-32695260)
chr8 (405-566)||(42872049-42872209)
chr8 (444-533)||(20180566-20180655)
chr8 (471-566)||(416430-416525)
chr8 (405-555)||(13117503-13117653)
chr8 (444-533)||(9854772-9854860)
chr8 (405-519)||(44076267-44076383)
chr8 (471-566)||(37400942-37401037)
chr8 (444-534)||(14840790-14840880)
chr8 (444-517)||(10669353-10669426)
chr8 (469-566)||(14030478-14030575)
chr8 (456-557)||(40437463-40437565)
chr8 (410-524)||(42877720-42877832)
chr8 (471-566)||(6337111-6337206)
chr8 (385-519)||(32693902-32694039)
chr8 (444-523)||(38696443-38696522)
chr8 (340-393)||(45281253-45281306)
chr8 (444-524)||(31845696-31845775)
chr8 (471-566)||(1659164-1659258)
chr8 (444-519)||(8571522-8571597)
chr8 (447-534)||(22551144-22551231)
chr8 (444-551)||(24305177-24305284)
chr8 (447-533)||(17455185-17455270)
chr8 (480-566)||(36803134-36803220)
chr8 (405-524)||(6397879-6397997)
chr8 (438-519)||(42870944-42871025)
chr8 (447-524)||(43202234-43202311)
chr8 (444-520)||(30786812-30786888)
chr8 (340-392)||(32798598-32798650)
chr8 (449-521)||(42878735-42878806)
chr8 (340-392)||(44076429-44076481)
chr8 (340-391)||(32695342-32695393)
chr8 (443-505)||(42362671-42362732)
chr8 (399-519)||(45279770-45279889)
chr8 (405-519)||(42100013-42100126)
chr8 (362-392)||(22551027-22551057)
chr8 (340-392)||(4810467-4810519)
chr8 (340-388)||(12850465-12850513)
chr8 (340-392)||(26696530-26696582)
chr8 (340-388)||(30786674-30786722)
chr8 (340-392)||(30787666-30787718)
chr8 (343-391)||(41629709-41629757)
chr8 (340-392)||(42870811-42870863)
[»] chr2 (45 HSPs)
chr2 (405-611)||(6030280-6030490)
chr2 (405-547)||(42641738-42641881)
chr2 (405-524)||(11317268-11317388)
chr2 (405-517)||(29219481-29219595)
chr2 (405-517)||(29332780-29332894)
chr2 (438-525)||(18616904-18616991)
chr2 (425-522)||(32469266-32469363)
chr2 (438-522)||(17459384-17459468)
chr2 (444-566)||(30749183-30749305)
chr2 (405-524)||(11547755-11547875)
chr2 (444-534)||(34513444-34513534)
chr2 (444-525)||(4920958-4921039)
chr2 (444-524)||(28611154-28611233)
chr2 (451-566)||(30748621-30748736)
chr2 (447-533)||(8320895-8320981)
chr2 (471-566)||(2384347-2384442)
chr2 (471-566)||(40323095-40323190)
chr2 (405-522)||(1085290-1085408)
chr2 (340-475)||(6028743-6028882)
chr2 (476-530)||(16290689-16290743)
chr2 (444-510)||(43033216-43033282)
chr2 (469-522)||(35903667-35903720)
chr2 (343-392)||(42641926-42641975)
chr2 (344-392)||(7436469-7436517)
chr2 (340-392)||(11317434-11317486)
chr2 (340-392)||(28562875-28562927)
chr2 (340-388)||(32469146-32469194)
chr2 (444-524)||(34467641-34467721)
chr2 (444-519)||(34464103-34464178)
chr2 (471-566)||(36215030-36215124)
chr2 (444-557)||(21664937-21665051)
chr2 (444-494)||(43034401-43034451)
chr2 (451-492)||(16295150-16295191)
chr2 (340-388)||(6030540-6030588)
chr2 (340-392)||(7437827-7437879)
chr2 (340-392)||(32470641-32470693)
chr2 (343-387)||(43034542-43034586)
chr2 (340-391)||(17459251-17459302)
chr2 (409-494)||(17460616-17460700)
chr2 (474-525)||(42249687-42249738)
chr2 (342-391)||(28561368-28561417)
chr2 (447-519)||(1083125-1083197)
chr2 (444-563)||(15850524-15850643)
chr2 (444-524)||(35799644-35799724)
chr2 (340-392)||(43033080-43033132)
[»] chr7 (50 HSPs)
chr7 (411-612)||(40811422-40811627)
chr7 (444-566)||(669248-669369)
chr7 (405-522)||(43460725-43460843)
chr7 (444-566)||(46201266-46201388)
chr7 (405-523)||(32255085-32255205)
chr7 (405-525)||(22537655-22537776)
chr7 (444-534)||(2414880-2414970)
chr7 (496-610)||(45454196-45454311)
chr7 (405-517)||(11502328-11502442)
chr7 (444-533)||(44372864-44372953)
chr7 (444-533)||(44381720-44381809)
chr7 (451-519)||(35295841-35295909)
chr7 (405-566)||(22336075-22336235)
chr7 (444-525)||(16756006-16756087)
chr7 (444-524)||(41328354-41328434)
chr7 (405-513)||(13564150-13564259)
chr7 (444-522)||(39981452-39981530)
chr7 (444-532)||(28325204-28325292)
chr7 (471-566)||(5095228-5095323)
chr7 (471-566)||(24051365-24051460)
chr7 (479-566)||(39752318-39752405)
chr7 (405-530)||(47454433-47454557)
chr7 (405-482)||(41078852-41078930)
chr7 (444-524)||(43441481-43441561)
chr7 (471-532)||(48312202-48312262)
chr7 (444-524)||(30334543-30334622)
chr7 (340-392)||(32256461-32256513)
chr7 (340-392)||(40811338-40811390)
chr7 (340-392)||(47456441-47456493)
chr7 (405-474)||(11501276-11501344)
chr7 (438-509)||(46835805-46835876)
chr7 (444-494)||(15992270-15992320)
chr7 (405-505)||(22337292-22337391)
chr7 (516-566)||(41078931-41078981)
chr7 (444-533)||(40508513-40508602)
chr7 (446-532)||(47059246-47059334)
chr7 (340-388)||(6173520-6173568)
chr7 (410-524)||(9662139-9662251)
chr7 (340-392)||(30310119-30310171)
chr7 (340-392)||(32602931-32602983)
chr7 (470-524)||(7346072-7346125)
chr7 (444-522)||(22115067-22115145)
chr7 (444-522)||(40509637-40509715)
chr7 (444-564)||(35484174-35484294)
chr7 (443-519)||(3413666-3413742)
chr7 (405-475)||(32256346-32256415)
chr7 (340-392)||(40509800-40509852)
chr7 (340-392)||(43459453-43459505)
chr7 (405-519)||(43459551-43459664)
chr7 (340-392)||(47454335-47454387)
[»] chr5 (32 HSPs)
chr5 (384-559)||(27705182-27705361)
chr5 (405-524)||(22047828-22047949)
chr5 (405-524)||(39603949-39604070)
chr5 (438-517)||(30859078-30859157)
chr5 (409-516)||(30910841-30910950)
chr5 (444-524)||(1102753-1102833)
chr5 (405-524)||(325087-325205)
chr5 (448-524)||(11262532-11262608)
chr5 (410-524)||(1010267-1010379)
chr5 (410-524)||(8521356-8521468)
chr5 (471-566)||(28393375-28393470)
chr5 (471-566)||(31171014-31171109)
chr5 (444-522)||(33173862-33173941)
chr5 (444-557)||(22308667-22308780)
chr5 (444-532)||(223358-223446)
chr5 (405-525)||(15548333-15548459)
chr5 (340-392)||(30859238-30859290)
chr5 (449-494)||(1009325-1009370)
chr5 (470-523)||(20539248-20539301)
chr5 (449-524)||(36898882-36898957)
chr5 (341-392)||(41798013-41798064)
chr5 (447-517)||(10735901-10735971)
chr5 (484-566)||(41874154-41874236)
chr5 (444-517)||(4127161-4127234)
chr5 (342-391)||(27705383-27705432)
chr5 (405-504)||(30912084-30912182)
chr5 (340-392)||(325251-325303)
chr5 (343-525)||(324068-324255)
chr5 (444-517)||(9220365-9220441)
chr5 (444-494)||(30857934-30857984)
chr5 (384-519)||(39605375-39605514)
chr5 (340-392)||(22047730-22047782)
[»] chr4 (66 HSPs)
chr4 (405-566)||(15449933-15450095)
chr4 (405-612)||(52239973-52240185)
chr4 (453-592)||(7053321-7053462)
chr4 (436-530)||(27850831-27850926)
chr4 (405-525)||(2312380-2312502)
chr4 (448-566)||(49896443-49896561)
chr4 (444-566)||(44498596-44498718)
chr4 (405-522)||(7707684-7707803)
chr4 (444-524)||(56085482-56085562)
chr4 (405-518)||(1794507-1794622)
chr4 (449-558)||(28590771-28590880)
chr4 (444-524)||(19750195-19750275)
chr4 (444-524)||(19789531-19789611)
chr4 (444-524)||(6348289-6348369)
chr4 (444-524)||(26496210-26496290)
chr4 (444-524)||(40723362-40723442)
chr4 (431-510)||(11968634-11968713)
chr4 (340-391)||(44503745-44503796)
chr4 (447-533)||(13165633-13165718)
chr4 (496-566)||(42872188-42872258)
chr4 (447-532)||(52138686-52138771)
chr4 (340-392)||(1188841-1188893)
chr4 (444-519)||(4871629-4871704)
chr4 (444-511)||(22069370-22069437)
chr4 (471-566)||(22161613-22161708)
chr4 (471-566)||(23317160-23317255)
chr4 (471-566)||(25922236-25922331)
chr4 (444-532)||(38555172-38555260)
chr4 (444-519)||(2311088-2311163)
chr4 (444-523)||(4714155-4714234)
chr4 (438-524)||(6349449-6349538)
chr4 (471-521)||(23103913-23103962)
chr4 (410-523)||(53435655-53435768)
chr4 (461-517)||(1519962-1520018)
chr4 (340-388)||(1794409-1794457)
chr4 (344-392)||(6349619-6349667)
chr4 (444-524)||(26629926-26630005)
chr4 (405-524)||(13166670-13166789)
chr4 (340-391)||(24426337-24426388)
chr4 (444-519)||(33231525-33231599)
chr4 (471-522)||(45535207-45535257)
chr4 (453-532)||(56157389-56157468)
chr4 (443-513)||(42810115-42810185)
chr4 (410-524)||(53432163-53432277)
chr4 (405-504)||(7708710-7708808)
chr4 (343-392)||(27850998-27851047)
chr4 (450-515)||(34326868-34326933)
chr4 (405-484)||(52963665-52963743)
chr4 (340-392)||(4128991-4129043)
chr4 (340-392)||(6348153-6348205)
chr4 (410-524)||(13533163-13533275)
chr4 (340-392)||(37882832-37882884)
chr4 (468-524)||(53401387-53401442)
chr4 (341-392)||(1829752-1829803)
chr4 (453-532)||(36243663-36243742)
chr4 (444-519)||(40792883-40792958)
chr4 (474-525)||(48207622-48207673)
chr4 (362-392)||(27847698-27847728)
chr4 (342-392)||(42810269-42810319)
chr4 (444-566)||(56296325-56296447)
chr4 (340-392)||(390215-390267)
chr4 (340-392)||(393704-393756)
chr4 (340-392)||(1831329-1831381)
chr4 (340-392)||(37884343-37884395)
chr4 (446-522)||(49342756-49342832)
chr4 (340-388)||(52239875-52239923)
[»] chr3 (46 HSPs)
chr3 (405-523)||(38242417-38242536)
chr3 (405-566)||(26886368-26886529)
chr3 (425-559)||(12107845-12107979)
chr3 (471-566)||(28909466-28909561)
chr3 (409-517)||(10732036-10732145)
chr3 (421-533)||(35371020-35371132)
chr3 (447-530)||(10301072-10301155)
chr3 (444-519)||(48083362-48083437)
chr3 (400-517)||(27841617-27841735)
chr3 (438-515)||(34819194-34819271)
chr3 (449-517)||(3208625-3208693)
chr3 (451-519)||(14745106-14745174)
chr3 (444-524)||(49379837-49379917)
chr3 (471-566)||(33705349-33705444)
chr3 (471-566)||(44175728-44175823)
chr3 (471-522)||(44602947-44602997)
chr3 (444-519)||(53420452-53420527)
chr3 (444-534)||(42685011-42685101)
chr3 (443-524)||(10338872-10338953)
chr3 (447-524)||(53194513-53194590)
chr3 (405-513)||(53614184-53614293)
chr3 (444-532)||(7270458-7270546)
chr3 (340-392)||(12108049-12108101)
chr3 (444-524)||(13621055-13621135)
chr3 (499-610)||(36176351-36176462)
chr3 (405-524)||(41264553-41264673)
chr3 (405-522)||(10730981-10731097)
chr3 (405-477)||(53622758-53622832)
chr3 (449-521)||(3455529-3455600)
chr3 (471-566)||(3807851-3807945)
chr3 (471-561)||(44182426-44182516)
chr3 (340-388)||(38242586-38242634)
chr3 (340-388)||(53624431-53624479)
chr3 (444-519)||(34818220-34818295)
chr3 (341-388)||(34819354-34819401)
chr3 (477-524)||(54110185-54110231)
chr3 (445-519)||(40244321-40244395)
chr3 (450-491)||(11224776-11224817)
chr3 (343-392)||(18458723-18458772)
chr3 (471-524)||(24487220-24487272)
chr3 (405-524)||(36175359-36175477)
chr3 (405-524)||(53624264-53624381)
chr3 (340-392)||(3209997-3210049)
chr3 (340-392)||(18197145-18197197)
chr3 (447-519)||(41263775-41263847)
chr3 (340-392)||(53194936-53194988)
[»] chr1 (54 HSPs)
chr1 (444-566)||(9226074-9226196)
chr1 (444-566)||(6049284-6049406)
chr1 (463-566)||(12665944-12666047)
chr1 (405-559)||(15232848-15233002)
chr1 (405-523)||(49801713-49801832)
chr1 (444-532)||(18821632-18821720)
chr1 (410-515)||(16965035-16965142)
chr1 (405-517)||(45584915-45585029)
chr1 (444-525)||(51445725-51445806)
chr1 (444-508)||(13147333-13147397)
chr1 (444-524)||(14478401-14478481)
chr1 (444-524)||(48096933-48097013)
chr1 (447-524)||(13894752-13894828)
chr1 (405-524)||(46110378-46110496)
chr1 (444-525)||(52078044-52078125)
chr1 (444-524)||(15746668-15746747)
chr1 (444-524)||(48527669-48527749)
chr1 (480-566)||(8027403-8027489)
chr1 (444-534)||(46467281-46467370)
chr1 (444-532)||(15072682-15072771)
chr1 (444-533)||(26802075-26802164)
chr1 (444-524)||(35943347-35943428)
chr1 (444-521)||(41873875-41873952)
chr1 (340-392)||(46111554-46111606)
chr1 (496-559)||(44278245-44278308)
chr1 (340-391)||(45585076-45585127)
chr1 (453-527)||(28050465-28050539)
chr1 (405-477)||(49802844-49802915)
chr1 (444-505)||(3617417-3617478)
chr1 (444-517)||(5612993-5613065)
chr1 (405-519)||(16963930-16964043)
chr1 (405-514)||(27814388-27814497)
chr1 (444-520)||(44999367-44999443)
chr1 (340-392)||(52627513-52627565)
chr1 (469-524)||(46318519-46318574)
chr1 (471-521)||(27556431-27556480)
chr1 (438-484)||(34350242-34350288)
chr1 (446-524)||(34351866-34351943)
chr1 (342-392)||(35943513-35943563)
chr1 (470-524)||(51042241-51042295)
chr1 (443-508)||(9485221-9485286)
chr1 (444-524)||(13642462-13642541)
chr1 (444-524)||(16123422-16123502)
chr1 (444-484)||(23091487-23091527)
chr1 (340-392)||(34352022-34352074)
chr1 (406-557)||(50444567-50444717)
chr1 (340-392)||(50444764-50444816)
chr1 (447-510)||(10722291-10722354)
chr1 (447-533)||(46111388-46111474)
chr1 (444-517)||(26286547-26286619)
chr1 (452-517)||(51300168-51300233)
chr1 (470-558)||(5804877-5804965)
chr1 (340-392)||(14470854-14470906)
chr1 (446-522)||(14470993-14471069)
[»] scaffold0077 (3 HSPs)
scaffold0077 (438-525)||(54083-54170)
scaffold0077 (405-519)||(52688-52801)
scaffold0077 (340-391)||(54252-54303)
[»] scaffold0118 (1 HSPs)
scaffold0118 (405-525)||(43473-43595)
[»] scaffold0013 (1 HSPs)
scaffold0013 (444-566)||(32705-32831)
[»] chr6 (16 HSPs)
chr6 (405-524)||(18346650-18346770)
chr6 (405-523)||(7311626-7311745)
chr6 (405-517)||(5187529-5187642)
chr6 (409-517)||(17837716-17837825)
chr6 (438-566)||(23392345-23392473)
chr6 (409-524)||(29381630-29381746)
chr6 (444-524)||(11722921-11723001)
chr6 (444-566)||(12669858-12669981)
chr6 (405-510)||(23397270-23397374)
chr6 (480-566)||(13847781-13847866)
chr6 (444-517)||(11967351-11967424)
chr6 (405-482)||(32506969-32507046)
chr6 (444-524)||(22298736-22298815)
chr6 (436-482)||(2352608-2352654)
chr6 (459-531)||(32505817-32505890)
chr6 (405-519)||(29380287-29380400)
[»] scaffold0031 (4 HSPs)
scaffold0031 (405-562)||(124065-124220)
scaffold0031 (405-518)||(125137-125253)
scaffold0031 (340-392)||(123967-124019)
scaffold0031 (341-392)||(125299-125350)
[»] scaffold0011 (1 HSPs)
scaffold0011 (444-524)||(127568-127648)
[»] scaffold2071 (1 HSPs)
scaffold2071 (454-534)||(572-652)
[»] scaffold0034 (2 HSPs)
scaffold0034 (449-517)||(108654-108722)
scaffold0034 (340-392)||(109811-109863)
[»] scaffold0035 (1 HSPs)
scaffold0035 (471-566)||(83080-83175)
[»] scaffold0219 (1 HSPs)
scaffold0219 (444-533)||(8083-8171)
[»] scaffold0201 (1 HSPs)
scaffold0201 (444-521)||(21262-21339)
[»] scaffold0128 (1 HSPs)
scaffold0128 (448-517)||(22119-22188)
[»] scaffold1178 (1 HSPs)
scaffold1178 (43-115)||(774-846)
[»] scaffold1152 (1 HSPs)
scaffold1152 (409-494)||(2407-2492)


Alignment Details
Target: chr8 (Bit Score: 138; Significance: 8e-72; HSPs: 50)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 138; E-Value: 8e-72
Query Start/End: Original strand, 405 - 612
Target Start/End: Complemental strand, 45281209 - 45281000
Alignment:
Q  405 tttgccaaataaatccga-cggttaaatttaactcaaatgatgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaat 503  Q
    |||||||||||||||| | | ||||| |||||  ||||||||||||| |||||||||||||||| |||||||||||||| ||||||||||||||||||||    
T  45281209 tttgccaaataaatcccaacagttaactttaatccaaatgatgtctacggtggaccaaccttaagagtggtctaccataaatcctattaatatttttaat 45281110  T
Q  504 ttaaaccgtttgatcttttttattaaaagataaacgttagatcatgcatgtctactgtatctttcacgagtcaac-acacttaagttttttcccatctca 602  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| || |||||||| |||||||| | ||||||||| |||    
T  45281109 ttaaaccgtttgatcttttttattaaaagatgaacgttagatcatgcatgtctactgtatcttccatgagtcaacaacacttaactgttttcccatttca 45281010  T
Q  603 tcatcttcat 612  Q
    ||||||||||    
T  45281009 tcatcttcat 45281000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 405 - 610
Target Start/End: Original strand, 4810565 - 4810769
Alignment:
Q  405 tttgccaaataaatcc-gacggttaaatttaactc-aaatgatgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaa 502  Q
    |||||||||||||||| ||||||||| |||||| | |||||||||||||||||||      |||| ||||||| ||||||||||||||||||||||||||    
T  4810565 tttgccaaataaatcccgacggttaactttaaccccaaatgatgtctatggtggaa-----ttaagagtggtccaccatagatcctattaatatttttaa 4810659  T
Q  503 tttaaaccgtttgatcttttttattaaaagataaacgttagatcatgcatgtctactgtatctttcacgagtcaac-acacttaa-gttttttcccatct 600  Q
    ||||||| |||||||||||||||||||||||  | ||||||||||| ||| |||| |||||||| |  |||||||| ||||||||  |||||||| || |    
T  4810660 tttaaactgtttgatcttttttattaaaagaggatcgttagatcatacatatctattgtatcttccttgagtcaacaacacttaattttttttcctattt 4810759  T
Q  601 catcatcttc 610  Q
    ||||||||||    
T  4810760 catcatcttc 4810769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 405 - 522
Target Start/End: Complemental strand, 32798552 - 32798434
Alignment:
Q  405 tttgccaaataaatccg-acggttaaatttaactcaaatgatgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaat 503  Q
    |||| |||||||||||  |||||||| ||||||||||||||||||||||||||| ||||||||| ||||||| ||||||||||||||||||  |||||||    
T  32798552 tttgtcaaataaatcctcacggttaagtttaactcaaatgatgtctatggtggatcaaccttaagagtggtccaccatagatcctattaattattttaat 32798453  T
Q  504 ttaaaccgtttgatctttt 522  Q
    |||||||||||||||||||    
T  32798452 ttaaaccgtttgatctttt 32798434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 405 - 522
Target Start/End: Original strand, 42098659 - 42098777
Alignment:
Q  405 tttgccaaataaatccgacggttaaatttaactc-aaatgatgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaat 503  Q
    ||||||||||||||||||| ||||| |||||| | ||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||   ||||||    
T  42098659 tttgccaaataaatccgactgttaattttaaccccaaatgatgtctttggtggaccaaccttaaaagtggtccaccatagatcctattaattactttaat 42098758  T
Q  504 ttaaaccgtttgatctttt 522  Q
    || ||||||||||| ||||    
T  42098759 ttcaaccgtttgatttttt 42098777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 444 - 557
Target Start/End: Complemental strand, 24192644 - 24192531
Alignment:
Q  444 atgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgatcttttttattaaaagataaacgttag 543  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||||||||  |||||||| |||||||||||| |||||| |||||||| || | ||||    
T  24192644 atgtctatggtggaccaaccttaagagtggtccaccatagatcctattaattattttaattaaaaccgtttgattttttttcttaaaagagaaccattag 24192545  T
Q  544 atcatgcatgtcta 557  Q
    || | |||||||||    
T  24192544 attacgcatgtcta 24192531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 496 - 579
Target Start/End: Original strand, 26696689 - 26696772
Alignment:
Q  496 tttttaatttaaaccgtttgatcttttttattaaaagataaacgttagatcatgcatgtctactgtatctttcacgagtcaaca 579  Q
    ||||||||||||||||||||||||||||||||||||||  | |||||||| |||||||||||||||||||| |  |||||||||    
T  26696689 tttttaatttaaaccgtttgatcttttttattaaaagaggatcgttagattatgcatgtctactgtatcttccgtgagtcaaca 26696772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 483 - 566
Target Start/End: Complemental strand, 34504616 - 34504533
Alignment:
Q  483 gatcctattaatatttttaatttaaaccgtttgatcttttttattaaaagataaacgttagatcatgcatgtctactgtatctt 566  Q
    |||||||||||| ||||||||||||||  ||||||||||||||||||||||  | |||||||||||||||||||||| ||||||    
T  34504616 gatcctattaatttttttaatttaaactctttgatcttttttattaaaagaggatcgttagatcatgcatgtctactatatctt 34504533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 438 - 524
Target Start/End: Complemental strand, 32695260 - 32695174
Alignment:
Q  438 caaatgatgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgatctttttt 524  Q
    |||||||||||||||||| ||||| ||||| | ||||| ||||||||||||||||||  ||||||||||||||||||||| ||||||    
T  32695260 caaatgatgtctatggtgaaccaatcttaagattggtccaccatagatcctattaattattttaatttaaaccgtttgatttttttt 32695174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 405 - 566
Target Start/End: Complemental strand, 42872209 - 42872049
Alignment:
Q  405 tttgccaaataaatcc-gacggttaaatttaac-tcaaatgatgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaa 502  Q
    |||| ||||||||||| ||||||||| |||||| |||||||   |||||||| |||||||||||| |||||||||||||||||||||||||| |||||||    
T  42872209 tttgtcaaataaatcctgacggttaactttaacctcaaatg---tctatggtagaccaaccttaagagtggtctaccatagatcctattaat-tttttaa 42872114  T
Q  503 tttaaaccgtttgat-cttttttattaaaagataaacgttagatcatgcatgtctactgtatctt 566  Q
    | ||| || || ||| ||||| |||||||  |  |  ||||||||||||||||||| ||||||||    
T  42872113 tataacccattcgatccttttgtattaaagtaggactgttagatcatgcatgtctattgtatctt 42872049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 444 - 533
Target Start/End: Complemental strand, 20180655 - 20180566
Alignment:
Q  444 atgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgatcttttttattaaaaga 533  Q
    |||||||| |||||| ||| |||| ||||||| ||||||||||||||||||  |||||||| ||||||||||||||||||| ||||||||    
T  20180655 atgtctatagtggactaacattaagagtggtccaccatagatcctattaattattttaattaaaaccgtttgatcttttttcttaaaaga 20180566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 471 - 566
Target Start/End: Complemental strand, 416525 - 416430
Alignment:
Q  471 tggtctaccatagatcctattaatatttttaatttaaaccgtttgatcttttttattaaaagataaacgttagatcatgcatgtctactgtatctt 566  Q
    ||||| || ||||||||||||| |||||||||| ||||||||||||||||||||| ||||  || |  ||||||||||||||||| ||||||||||    
T  416525 tggtccactatagatcctattattatttttaatataaaccgtttgatcttttttaataaagaatgattgttagatcatgcatgtccactgtatctt 416430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 405 - 555
Target Start/End: Complemental strand, 13117653 - 13117503
Alignment:
Q  405 tttgccaaataaatcc-gacggttaaatttaactcaaatgatgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaat 503  Q
    |||||||||||||||| |||  | || |||||| |||||||| | ||| |||||||||| |||||||||||| | ||||||||||||||||  |||||||    
T  13117653 tttgccaaataaatcccgaccatcaagtttaacccaaatgatctatatagtggaccaactttaaaagtggtccatcatagatcctattaattattttaat 13117554  T
Q  504 ttaaaccgtttgatcttttttattaaaagataaacgttagatcatgcatgtc 555  Q
     | ||||||||||| |||||| |||||||| || | || ||| |||||||||    
T  13117553 atcaaccgtttgatgtttttt-ttaaaagagaaccattggattatgcatgtc 13117503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 444 - 533
Target Start/End: Complemental strand, 9854860 - 9854772
Alignment:
Q  444 atgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgatcttttttattaaaaga 533  Q
    ||||||||||||||||||| |||| ||||||| ||||||||||||||||||  || ||||||||||| |||||| |||||| ||||||||    
T  9854860 atgtctatggtggaccaactttaagagtggtccaccatagatcctattaattcttctaatttaaaccatttgat-tttttttttaaaaga 9854772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 405 - 519
Target Start/End: Complemental strand, 44076383 - 44076267
Alignment:
Q  405 tttgccaaataaatccg-acggttaaatttaactc-aaatgatgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaa 502  Q
    ||||||||||||||||  || ||||| |||||| | ||||||||||||||||||| |||| |||||| || || |||||| ||| ||||||| |||||||    
T  44076383 tttgccaaataaatccctacagttaagtttaaccccaaatgatgtctatggtggaacaacattaaaaatgatccaccataaatcttattaatttttttaa 44076284  T
Q  503 tttaaaccgtttgatct 519  Q
    |||||||| ||||||||    
T  44076283 tttaaaccatttgatct 44076267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 471 - 566
Target Start/End: Original strand, 37400942 - 37401037
Alignment:
Q  471 tggtctaccatagatcctattaatatttttaatttaaaccgtttgatcttttttattaaaagataaacgttagatcatgcatgtctactgtatctt 566  Q
    ||||| |||||||||||||||||| |||||||| ||||||||||||||||||||| ||||  |  |  ||||||||||||||||  ||||||||||    
T  37400942 tggtccaccatagatcctattaatttttttaatataaaccgtttgatcttttttaataaagaaggattgttagatcatgcatgttcactgtatctt 37401037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 444 - 534
Target Start/End: Complemental strand, 14840880 - 14840790
Alignment:
Q  444 atgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgatcttttttattaaaagat 534  Q
    ||||||||||||||||||| ||||||||| || ||||||| || ||||||  |||||||||||||||||||||| | |||| | |||||||    
T  14840880 atgtctatggtggaccaacattaaaagtgatccaccatagttcttattaaattttttaatttaaaccgtttgatatgttttctaaaaagat 14840790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 444 - 517
Target Start/End: Complemental strand, 10669426 - 10669353
Alignment:
Q  444 atgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgat 517  Q
    |||||||||||| ||||||||||| ||||||| |||||||||||||||||   ||||||||||||||| |||||    
T  10669426 atgtctatggtgaaccaaccttaagagtggtccaccatagatcctattaaatattttaatttaaaccgattgat 10669353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 469 - 566
Target Start/End: Original strand, 14030478 - 14030575
Alignment:
Q  469 agtggtctaccatagatcctattaatatttttaatttaaaccgtttgatcttttttattaaaagataaacgttagatcatgcatgtctactgtatctt 566  Q
    ||||||| || ||||||||||||| | |||||||| ||||||||||||||||||||| ||||  |  |  ||||||||||||||||| ||||||||||    
T  14030478 agtggtccactatagatcctattattttttttaatataaaccgtttgatcttttttaataaagaaggattgttagatcatgcatgtccactgtatctt 14030575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 456 - 557
Target Start/End: Complemental strand, 40437565 - 40437463
Alignment:
Q  456 gaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgatctt--ttttattaaaagataaacgttagatcatgcatg 553  Q
    |||||||||||||||||||| ||| ||||||||||||||  ||||||||||||| ||||||| ||  |||| |||||||||  || |||||||| |||||    
T  40437565 gaccaaccttaaaagtggtccaccgtagatcctattaattattttaatttaaactgtttgatatttatttttttaaaagat-gacattagatcacgcatg 40437467  T
Q  554 tcta 557  Q
    ||||    
T  40437466 tcta 40437463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 410 - 524
Target Start/End: Original strand, 42877720 - 42877832
Alignment:
Q  410 caaataaatcc-gacggttaaatttaactcaaatgatgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaa 508  Q
    ||||||||||| ||||||||| |||||| | ||  |||| ||||||||||||||||||| | ||||| |||||||||||||||||| | |||||||| ||    
T  42877720 caaataaatcccgacggttaactttaaccccaa--atgtgtatggtggaccaaccttaagaatggtccaccatagatcctattaat-tatttaatttcaa 42877816  T
Q  509 ccgtttgatctttttt 524  Q
    || |||||||| ||||    
T  42877817 ccctttgatctatttt 42877832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 471 - 566
Target Start/End: Complemental strand, 6337206 - 6337111
Alignment:
Q  471 tggtctaccatagatcctattaatatttttaatttaaaccgtttgatcttttttattaaaagataaacgttagatcatgcatgtctactgtatctt 566  Q
    ||||| || ||||||||||||| | |||||||| ||||||||||||||||||||| ||||  |  |  ||||||||||||||||| ||||||||||    
T  6337206 tggtccactatagatcctattattttttttaatataaaccgtttgatcttttttaataaagaaagattgttagatcatgcatgtccactgtatctt 6337111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 385 - 519
Target Start/End: Original strand, 32693902 - 32694039
Alignment:
Q  385 tttggtccatcagattttcct----ttgccaaataaatccga-cggttaaatttaactcaaatgatgtctatggtggaccaaccttaaaagtggtctacc 479  Q
    |||||||| ||||||||||||    ||||||||||||||| | | ||||| |||||||  ||  |||| |||| |||||||||||||||||||| ||| |    
T  32693902 tttggtccttcagattttcctccgtttgccaaataaatcccaacagttaactttaactttaa--atgtatatgatggaccaaccttaaaagtggcctatc 32693999  T
Q  480 atagatcctattaatatttttaatttaaaccgtttgatct 519  Q
    ||||| | ||||||| || ||||||| |||||||||||||    
T  32694000 atagaccttattaattttattaattttaaccgtttgatct 32694039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 444 - 523
Target Start/End: Original strand, 38696443 - 38696522
Alignment:
Q  444 atgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgatcttttt 523  Q
    ||||||||||| |||||||||||||||||||| ||||||||||  |||||| ||| |||||| |||| |||||| |||||    
T  38696443 atgtctatggtagaccaaccttaaaagtggtccaccatagatctaattaatttttataattttaaccctttgattttttt 38696522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 340 - 393
Target Start/End: Complemental strand, 45281306 - 45281253
Alignment:
Q  340 ggcttatttgattcaatagtctctcaaataatttcaagtttttattttggtcca 393  Q
    |||||||||||| |||||||| |||||||||||||||||||| |||||||||||    
T  45281306 ggcttatttgatccaatagtccctcaaataatttcaagttttcattttggtcca 45281253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 444 - 524
Target Start/End: Complemental strand, 31845775 - 31845696
Alignment:
Q  444 atgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgatctttttt 524  Q
    |||||||||||| |||||| |||| ||||||| ||||||| ||||||||||  ||||||| ||||| ||||||||||||||    
T  31845775 atgtctatggtgaaccaac-ttaagagtggtccaccataggtcctattaattattttaatgtaaactgtttgatctttttt 31845696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 471 - 566
Target Start/End: Complemental strand, 1659258 - 1659164
Alignment:
Q  471 tggtctaccatagatcctattaatatttttaatttaaaccgtttgatcttttttattaaaagataaacgttagatcatgcatgtctactgtatctt 566  Q
    ||||| || ||||||||||||| | |||||||| ||||||||||||||||||||| ||||  |  |  ||||||||||||||||| ||||||||||    
T  1659258 tggtccactatagatcctattatt-tttttaatataaaccgtttgatcttttttaataaagaaggattgttagatcatgcatgtccactgtatctt 1659164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 444 - 519
Target Start/End: Complemental strand, 8571597 - 8571522
Alignment:
Q  444 atgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgatct 519  Q
    ||||||||||||||||||| |||||| ||||| |||||| | | ||||||  |||||||||||||| |||||||||    
T  8571597 atgtctatggtggaccaactttaaaaatggtccaccatataccttattaaactttttaatttaaactgtttgatct 8571522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 447 - 534
Target Start/End: Original strand, 22551144 - 22551231
Alignment:
Q  447 tctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgatcttttttattaaaagat 534  Q
    |||||||||||| ||||||||||||| || |||||| | | ||||||  ||| |||||||||||||||||||| |||| | |||||||    
T  22551144 tctatggtggacaaaccttaaaagtgatccaccataaaccttattaaattttgtaatttaaaccgtttgatctgttttttaaaaagat 22551231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 444 - 551
Target Start/End: Original strand, 24305177 - 24305284
Alignment:
Q  444 atgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgatcttttttattaaaagataaacgttag 543  Q
    ||||||||||||||||||| |||| |||| |||| | |||||||||||||| |||| || || |||  ||||||||||| | |||||||| || |||| |    
T  24305177 atgtctatggtggaccaacattaagagtgatctatcttagatcctattaattttttaaacttcaactatttgatcttttgttttaaaagaaaatcgttgg 24305276  T
Q  544 atcatgca 551  Q
    || |||||    
T  24305277 ataatgca 24305284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 447 - 533
Target Start/End: Original strand, 17455185 - 17455270
Alignment:
Q  447 tctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgatcttttttattaaaaga 533  Q
    |||||| | |||||| ||||||||||||| |||||||||| |||||||  ||||||||| |||||||| |||| |||| ||||||||    
T  17455185 tctatgctagaccaatcttaaaagtggtccaccatagatcttattaattattttaatttgaaccgttttatctatttt-ttaaaaga 17455270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 480 - 566
Target Start/End: Complemental strand, 36803220 - 36803134
Alignment:
Q  480 atagatcctattaatatttttaatttaaaccgtttgatcttttttattaaaagataaacgttagatcatgcatgtctactgtatctt 566  Q
    ||||||||||||  | |||||||| ||||||||||||||||||||| ||||  |  |  ||||||||||||||||| ||||||||||    
T  36803220 atagatcctatttttttttttaatataaaccgtttgatcttttttaataaagaaggattgttagatcatgcatgtccactgtatctt 36803134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 405 - 524
Target Start/End: Original strand, 6397879 - 6397997
Alignment:
Q  405 tttgccaaataaatcc-gacggttaaatttaactcaaatgatgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaat 503  Q
    |||||||||||||||  ||  |||||||||||||| ||  ||  |||||||  ||||||||| | ||||||| |||||||| | ||||||| ||||||||    
T  6397879 tttgccaaataaatcatgaatgttaaatttaactccaa--ataactatggtaaaccaacctttacagtggtccaccatagaccttattaatttttttaat 6397976  T
Q  504 ttaaaccgtttgatctttttt 524  Q
    ||||||| |||||||| ||||    
T  6397977 ttaaaccatttgatctgtttt 6397997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 438 - 519
Target Start/End: Original strand, 42870944 - 42871025
Alignment:
Q  438 caaatgatgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgatct 519  Q
    |||| ||||||||| ||||||||| ||||| ||||||| ||| |||| | ||||||  ||| ||||||||||||||||||||    
T  42870944 caaaagatgtctattgtggaccaatcttaagagtggtccaccgtagaccttattaaattttgtaatttaaaccgtttgatct 42871025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 447 - 524
Target Start/End: Original strand, 43202234 - 43202311
Alignment:
Q  447 tctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgatctttttt 524  Q
    ||||| ||||| ||||||||| ||||||| |||||||||||||||| |  ||| ||||||||| ||||||| ||||||    
T  43202234 tctatagtggatcaaccttaagagtggtccaccatagatcctattagttatttaaatttaaactgtttgatttttttt 43202311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 444 - 520
Target Start/End: Original strand, 30786812 - 30786888
Alignment:
Q  444 atgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgatctt 520  Q
    |||||||||||||| |||| |||||||||||| | |||| | | ||||||| || ||||||| ||||||||||||||    
T  30786812 atgtctatggtggatcaactttaaaagtggtccatcataaaccttattaattttgttaattttaaccgtttgatctt 30786888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 340 - 392
Target Start/End: Complemental strand, 32798650 - 32798598
Alignment:
Q  340 ggcttatttgattcaatagtctctcaaataatttcaagtttttattttggtcc 392  Q
    |||||||||||| |||| ||| |||||||||||||||||||| ||||||||||    
T  32798650 ggcttatttgatgcaatggtccctcaaataatttcaagttttcattttggtcc 32798598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 449 - 521
Target Start/End: Complemental strand, 42878806 - 42878735
Alignment:
Q  449 tatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgatcttt 521  Q
    |||||||||||||||||||  |||||| |||||||||||||||||| | |||||| | |||| ||||||||||    
T  42878806 tatggtggaccaaccttaagtgtggtccaccatagatcctattaat-tatttaatcttaaccctttgatcttt 42878735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 340 - 392
Target Start/End: Complemental strand, 44076481 - 44076429
Alignment:
Q  340 ggcttatttgattcaatagtctctcaaataatttcaagtttttattttggtcc 392  Q
    |||||||||||| |||| ||| ||||||||||||||| |||||||||||||||    
T  44076481 ggcttatttgatccaatggtccctcaaataatttcaaatttttattttggtcc 44076429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 340 - 391
Target Start/End: Complemental strand, 32695393 - 32695342
Alignment:
Q  340 ggcttatttgattcaatagtctctcaaataatttcaagtttttattttggtc 391  Q
    ||||||||||||||| | ||| |||||||||||||||||||| |||||||||    
T  32695393 ggcttatttgattcattggtccctcaaataatttcaagttttcattttggtc 32695342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 443 - 505
Target Start/End: Complemental strand, 42362732 - 42362671
Alignment:
Q  443 gatgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaattt 505  Q
    |||||||||||||||||||| |||| ||||||  | |||||||||||||||| ||||||||||    
T  42362732 gatgtctatggtggaccaacattaagagtggttcatcatagatcctattaat-tttttaattt 42362671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 399 - 519
Target Start/End: Original strand, 45279770 - 45279889
Alignment:
Q  399 ttttcctttgccaaataaatcc-gacggttaaatttaactcaaatgatgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatt 497  Q
    ||||| |||| ||||||||||| ||||||||| |||||||| ||  |||| ||||||||||||  ||||||||||||||| | |||| | || |||| ||    
T  45279770 ttttcgtttggcaaataaatcccgacggttaactttaactctaa--atgtatatggtggaccagtcttaaaagtggtctatcgtagaccttaataatttt 45279867  T
Q  498 tttaatttaaaccgtttgatct 519  Q
     ||||||| |||| || |||||    
T  45279868 gttaattttaaccattcgatct 45279889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 405 - 519
Target Start/End: Complemental strand, 42100126 - 42100013
Alignment:
Q  405 tttgccaaataaatcc-gacggttaaatttaactcaaatgatgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaat 503  Q
    |||||||||||| ||| ||| ||||| |||||||  ||  |||||| ||||||||||||||||||||||||| | | |||| | ||||||| || |||||    
T  42100126 tttgccaaataattcccgactgttaactttaacttcaa--atgtctttggtggaccaaccttaaaagtggtccatcgtagaccttattaattttgttaat 42100029  T
Q  504 ttaaaccgtttgatct 519  Q
    || |||| || |||||    
T  42100028 tttaaccattcgatct 42100013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 362 - 392
Target Start/End: Original strand, 22551027 - 22551057
Alignment:
Q  362 ctcaaataatttcaagtttttattttggtcc 392  Q
    |||||||||||||||||||||||||||||||    
T  22551027 ctcaaataatttcaagtttttattttggtcc 22551057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 340 - 392
Target Start/End: Original strand, 4810467 - 4810519
Alignment:
Q  340 ggcttatttgattcaatagtctctcaaataatttcaagtttttattttggtcc 392  Q
    ||||||||||||  ||| ||| |||||||| |||||| |||||||||||||||    
T  4810467 ggcttatttgatctaatggtccctcaaatactttcaaatttttattttggtcc 4810519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 340 - 388
Target Start/End: Complemental strand, 12850513 - 12850465
Alignment:
Q  340 ggcttatttgattcaatagtctctcaaataatttcaagtttttattttg 388  Q
    |||||||||||| |||| ||| ||||||||||||||| |||| ||||||    
T  12850513 ggcttatttgatccaatggtccctcaaataatttcaaattttcattttg 12850465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 340 - 392
Target Start/End: Original strand, 26696530 - 26696582
Alignment:
Q  340 ggcttatttgattcaatagtctctcaaataatttcaagtttttattttggtcc 392  Q
    ||||||||||||||||| ||| |  || |||||||||||||| ||||||||||    
T  26696530 ggcttatttgattcaatggtcccctaattaatttcaagttttcattttggtcc 26696582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 340 - 388
Target Start/End: Original strand, 30786674 - 30786722
Alignment:
Q  340 ggcttatttgattcaatagtctctcaaataatttcaagtttttattttg 388  Q
    ||||||||||||||||| |||  ||||||||||| ||||||| ||||||    
T  30786674 ggcttatttgattcaatggtccttcaaataattttaagttttcattttg 30786722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 340 - 392
Target Start/End: Complemental strand, 30787718 - 30787666
Alignment:
Q  340 ggcttatttgattcaatagtctctcaaataatttcaagtttttattttggtcc 392  Q
    ||||||||||||  |||  ||||||||||||||| ||||||| ||||||||||    
T  30787718 ggcttatttgatctaatgttctctcaaataattttaagttttcattttggtcc 30787666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 343 - 391
Target Start/End: Original strand, 41629709 - 41629757
Alignment:
Q  343 ttatttgattcaatagtctctcaaataatttcaagtttttattttggtc 391  Q
    ||||||||| || ||||| |  |||||||||||||||||||||||||||    
T  41629709 ttatttgatccattagtcccctaaataatttcaagtttttattttggtc 41629757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 340 - 392
Target Start/End: Original strand, 42870811 - 42870863
Alignment:
Q  340 ggcttatttgattcaatagtctctcaaataatttcaagtttttattttggtcc 392  Q
    |||||||||||| |||| || ||  ||||||||||||||||| ||||||||||    
T  42870811 ggcttatttgatccaatggtttcctaaataatttcaagttttcattttggtcc 42870863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 132; Significance: 3e-68; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 405 - 611
Target Start/End: Complemental strand, 6030490 - 6030280
Alignment:
Q  405 tttgccaaataaatc-cgacggttaaatttaactcaaatgatgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaat 503  Q
    ||||||||||||||| | || ||||| |||||| ||||||||||||| |||||||||||||||| |||| ||||||||||||||||||||||||||||||    
T  6030490 tttgccaaataaatctcaacagttaactttaacccaaatgatgtctacggtggaccaaccttaagagtgatctaccatagatcctattaatatttttaat 6030391  T
Q  504 ttaaaccgtttgatcttttttattaaaagataaacgttagatcatgcatgtctactgtatctttcacgagtcaac-acacttaa--gttttttcccatct 600  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| || |||||||| ||||||||   ||||||||||| |    
T  6030390 ttaaaccgtttgatcttttttattaaaagatgaacgttatatcatgcatgtctactgtatcttccatgagtcaacaacacttaacttttttttcccattt 6030291  T
Q  601 catcatcttca 611  Q
    |||||||||||    
T  6030290 catcatcttca 6030280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 405 - 547
Target Start/End: Complemental strand, 42641881 - 42641738
Alignment:
Q  405 tttgccaaataaatccg-acggttaaatttaactcaaatgatgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaat 503  Q
    ||||||||||||||||  ||  |||| || ||| ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||  |||||||    
T  42641881 tttgccaaataaatcctcacaattaagttcaacccaaatgatgtctatggtgggccaaccttaagagtggtctaccatagatcctattaattattttaat 42641782  T
Q  504 ttaaaccgtttgatcttttttattaaaagataaacgttagatca 547  Q
    |||||| |||||||||||||| |||||||| || |||| |||||    
T  42641781 ttaaactgtttgatctttttttttaaaagagaatcgttggatca 42641738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 405 - 524
Target Start/End: Complemental strand, 11317388 - 11317268
Alignment:
Q  405 tttgccaaataaatccg-acggttaaatttaactcaaatgatgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaat 503  Q
    |||| |||||||||||  || ||||| |||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||  |||||||    
T  11317388 tttggcaaataaatcctcacagttaagtttaactcaaatgatgtctatggtagaccaaccttaagagtggtctaccatagatcctattaattattttaat 11317289  T
Q  504 ttaaaccgtttgatctttttt 524  Q
    ||||| |||||| || |||||    
T  11317288 ttaaatcgtttggtcattttt 11317268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 405 - 517
Target Start/End: Original strand, 29219481 - 29219595
Alignment:
Q  405 tttgccaaataaatccga-cggttaaatttaactc-aaatgatgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaa 502  Q
    |||||||||||||||| | | ||||| |||||| | ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||  ||||||    
T  29219481 tttgccaaataaatcccaactgttaagtttaaccccaaatgatgtctatggtggaccaatcttaaaagtggtccaccatagatcctattaattattttaa 29219580  T
Q  503 tttaaaccgtttgat 517  Q
    ||| |||||||||||    
T  29219581 tttcaaccgtttgat 29219595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 405 - 517
Target Start/End: Original strand, 29332780 - 29332894
Alignment:
Q  405 tttgccaaataaatccga-cggttaaatttaactc-aaatgatgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaa 502  Q
    |||||||||||||||| | | ||||| |||||| | ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||  ||||||    
T  29332780 tttgccaaataaatcccaactgttaagtttaaccccaaatgatgtctatggtggaccaatcttaaaagtggtccaccatagatcctattaattattttaa 29332879  T
Q  503 tttaaaccgtttgat 517  Q
    ||| |||||||||||    
T  29332880 tttcaaccgtttgat 29332894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 438 - 525
Target Start/End: Complemental strand, 18616991 - 18616904
Alignment:
Q  438 caaatgatgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgatctttttta 525  Q
    |||||||||||||||||||||||  ||||||||||||| ||||||||||||||||||  ||||||||| ||||||||||| |||||||    
T  18616991 caaatgatgtctatggtggaccagtcttaaaagtggtccaccatagatcctattaattattttaatttcaaccgtttgatttttttta 18616904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 425 - 522
Target Start/End: Original strand, 32469266 - 32469363
Alignment:
Q  425 gttaaatttaactcaaatgatgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgatctttt 522  Q
    ||||| |||||||||||| |||| |||||||||||||| |||| ||||||| || |||||||||||||||  |||||||||||||| |||||| ||||    
T  32469266 gttaagtttaactcaaattatgtatatggtggaccaactttaagagtggtccactatagatcctattaattattttaatttaaaccctttgatatttt 32469363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 438 - 522
Target Start/End: Original strand, 17459384 - 17459468
Alignment:
Q  438 caaatgatgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgatctttt 522  Q
    ||||||||||||||||||||| || |||||||||| |||| ||||||||||||||||  || |||||||||||||||||| ||||    
T  17459384 caaatgatgtctatggtggacgaatcttaaaagtgatctaacatagatcctattaattattataatttaaaccgtttgatttttt 17459468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 444 - 566
Target Start/End: Complemental strand, 30749305 - 30749183
Alignment:
Q  444 atgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgatctttttt-attaaaagataaacgtta 542  Q
    |||||||||||  ||||||||||| ||||||  || | ||  |||||||||  |||||||||||||||| ||||||||||| |||||||||  | |||||    
T  30749305 atgtctatggta-accaaccttaagagtggttcactacagggcctattaattattttaatttaaaccgtatgatcttttttgattaaaagaggaccgtta 30749207  T
Q  543 gatcatgcatgtctactgtatctt 566  Q
    ||||||||||||||||||||||||    
T  30749206 gatcatgcatgtctactgtatctt 30749183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 405 - 524
Target Start/End: Original strand, 11547755 - 11547875
Alignment:
Q  405 tttgccaaataaatcc-gacggttaaatttaactc-aaatgatgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaa 502  Q
    |||| ||||||||||| ||| ||||| |||||| | |||||||||||||  |||||||||||||  ||||||| |||||||||| |||||| |||| |||    
T  11547755 tttgtcaaataaatcctgactgttaagtttaaccccaaatgatgtctatcatggaccaaccttaggagtggtccaccatagatcgtattaa-atttataa 11547853  T
Q  503 tttaaaccgtttgatctttttt 524  Q
    ||||||||||||||||| ||||    
T  11547854 tttaaaccgtttgatctgtttt 11547875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 444 - 534
Target Start/End: Complemental strand, 34513534 - 34513444
Alignment:
Q  444 atgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgatcttttttattaaaagat 534  Q
    |||| |||||| |||||||||||| |||| || |||||||| | ||||||| |||||||||||||||||||||||| |||| | |||||||    
T  34513534 atgtatatggttgaccaaccttaagagtgatccaccatagaccttattaatttttttaatttaaaccgtttgatctgttttttaaaaagat 34513444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 444 - 525
Target Start/End: Complemental strand, 4921039 - 4920958
Alignment:
Q  444 atgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgatctttttta 525  Q
    ||||||||||| ||||||| |||||| ||||| |||||| |||||||||||  || |||||||||||||||||| |||||||    
T  4921039 atgtctatggtagaccaactttaaaaatggtccaccataaatcctattaattattctaatttaaaccgtttgatttttttta 4920958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 444 - 524
Target Start/End: Complemental strand, 28611233 - 28611154
Alignment:
Q  444 atgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgatctttttt 524  Q
    |||||||||||||||| || |||||| ||||| || ||||||||||||||| | |||||||||||||||||||| ||||||    
T  28611233 atgtctatggtggaccgactttaaaaatggtccactatagatcctattaat-tatttaatttaaaccgtttgatttttttt 28611154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 451 - 566
Target Start/End: Original strand, 30748621 - 30748736
Alignment:
Q  451 tggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgatcttttttattaaaagataaacgttagatcatgc 550  Q
    ||||| || |||||||| |||||   |||||||||| |||||||  ||||||||||||  |||||||||||||||||||||||  | |||||  ||||||    
T  30748621 tggtgaacaaaccttaagagtggcacaccatagatcatattaattattttaatttaaattgtttgatcttttttattaaaagaggatcgttaattcatgc 30748720  T
Q  551 atgtctactgtatctt 566  Q
    ||||||| | ||||||    
T  30748721 atgtctagtatatctt 30748736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 447 - 533
Target Start/End: Original strand, 8320895 - 8320981
Alignment:
Q  447 tctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgatcttttttattaaaaga 533  Q
    |||||||||||||| |||||| || |||| |||||||||  |||||||  |||||||||||||||||||||  ||||| ||||||||    
T  8320895 tctatggtggaccatccttaagagcggtccaccatagattatattaattattttaatttaaaccgtttgattgttttttttaaaaga 8320981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 471 - 566
Target Start/End: Complemental strand, 2384442 - 2384347
Alignment:
Q  471 tggtctaccatagatcctattaatatttttaatttaaaccgtttgatcttttttattaaaagataaacgttagatcatgcatgtctactgtatctt 566  Q
    ||||| || ||||||||||||| | |||||||| ||||| ||||||||||||||| ||||  |  |  ||||||||||||||||| ||||||||||    
T  2384442 tggtccactatagatcctattattttttttaatataaactgtttgatcttttttaataaagaaggattgttagatcatgcatgtccactgtatctt 2384347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 471 - 566
Target Start/End: Original strand, 40323095 - 40323190
Alignment:
Q  471 tggtctaccatagatcctattaatatttttaatttaaaccgtttgatcttttttattaaaagataaacgttagatcatgcatgtctactgtatctt 566  Q
    ||||| || ||||||||||||| | |||||||| ||||||||||||||||||||| ||||  |  |  |||||||||||||||||  |||||||||    
T  40323095 tggtccactatagatcctattattttttttaatataaaccgtttgatcttttttaataaagaaggattgttagatcatgcatgtcggctgtatctt 40323190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 405 - 522
Target Start/End: Complemental strand, 1085408 - 1085290
Alignment:
Q  405 tttgccaaataaatc-cgacggttaaatttaactcaaatgatgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaat 503  Q
    ||||||||||||||| | || ||||| |||||   ||||||||| ||||||||| || | |||| ||||||  ||||||||||||||||||  |||||||    
T  1085408 tttgccaaataaatcacaaccgttaagtttaataaaaatgatgtttatggtggatcatctttaagagtggtacaccatagatcctattaattattttaat 1085309  T
Q  504 ttaaaccgtttgatctttt 522  Q
    ||  |||||||||| ||||    
T  1085308 ttcgaccgtttgatttttt 1085290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 340 - 475
Target Start/End: Original strand, 6028743 - 6028882
Alignment:
Q  340 ggcttatttgattcaatagtctctcaaataatttcaagtttttattttggtccatcagatt----ttcctttgccaaataaa--tccgacggttaaattt 433  Q
    |||||||||||| || | |||||  |||||||||||| |||| |||||||||| |||  ||    ||| |||||||||||||  |||||||||||| |||    
T  6028743 ggcttatttgatccattggtctcctaaataatttcaaattttcattttggtccctcaagtttttcttcgtttgccaaataaatttccgacggttaacttt 6028842  T
Q  434 aactcaaatgatgtctatggtggaccaaccttaaaagtggtc 475  Q
    ||||| ||  |||| ||||||||||||  |||||||||||||    
T  6028843 aactctaa--atgtatatggtggaccagtcttaaaagtggtc 6028882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 476 - 530
Target Start/End: Complemental strand, 16290743 - 16290689
Alignment:
Q  476 taccatagatcctattaatatttttaatttaaaccgtttgatcttttttattaaa 530  Q
    |||||||||||||||||||  |||||||||||| ||||| |||||||||||||||    
T  16290743 taccatagatcctattaattattttaatttaaatcgtttaatcttttttattaaa 16290689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 444 - 510
Target Start/End: Original strand, 43033216 - 43033282
Alignment:
Q  444 atgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaacc 510  Q
    ||||||||||| |||||||||||| ||||||| |||||| | |||||||||  ||||||||||||||    
T  43033216 atgtctatggtagaccaaccttaagagtggtccaccataaaccctattaattattttaatttaaacc 43033282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 469 - 522
Target Start/End: Original strand, 35903667 - 35903720
Alignment:
Q  469 agtggtctaccatagatcctattaatatttttaatttaaaccgtttgatctttt 522  Q
    ||||||| |||||||||||||||||   ||||||||||||||||||||||||||    
T  35903667 agtggtccaccatagatcctattaaatattttaatttaaaccgtttgatctttt 35903720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 343 - 392
Target Start/End: Complemental strand, 42641975 - 42641926
Alignment:
Q  343 ttatttgattcaatagtctctcaaataatttcaagtttttattttggtcc 392  Q
    |||||||||||||| ||| ||||||||||||||| |||||||||||||||    
T  42641975 ttatttgattcaatggtccctcaaataatttcaaatttttattttggtcc 42641926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 344 - 392
Target Start/End: Original strand, 7436469 - 7436517
Alignment:
Q  344 tatttgattcaatagtctctcaaataatttcaagtttttattttggtcc 392  Q
    |||||||| |||| ||| |||||||||||||||||||||||||||||||    
T  7436469 tatttgatccaatggtccctcaaataatttcaagtttttattttggtcc 7436517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 340 - 392
Target Start/End: Complemental strand, 11317486 - 11317434
Alignment:
Q  340 ggcttatttgattcaatagtctctcaaataatttcaagtttttattttggtcc 392  Q
    ||||||||||||||||| ||| ||||||||||||||| |||| ||||||||||    
T  11317486 ggcttatttgattcaatggtccctcaaataatttcaaattttcattttggtcc 11317434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 340 - 392
Target Start/End: Complemental strand, 28562927 - 28562875
Alignment:
Q  340 ggcttatttgattcaatagtctctcaaataatttcaagtttttattttggtcc 392  Q
    ||||||||||||||||| ||| ||||||||||||||| |||| ||||||||||    
T  28562927 ggcttatttgattcaatggtccctcaaataatttcaaattttcattttggtcc 28562875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 340 - 388
Target Start/End: Original strand, 32469146 - 32469194
Alignment:
Q  340 ggcttatttgattcaatagtctctcaaataatttcaagtttttattttg 388  Q
    ||||||||||||||||| ||| |||||||||||||||||||| ||||||    
T  32469146 ggcttatttgattcaatggtccctcaaataatttcaagttttcattttg 32469194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 444 - 524
Target Start/End: Original strand, 34467641 - 34467721
Alignment:
Q  444 atgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgatctttttt 524  Q
    ||||||||| ||||| |||||||| ||||||| |||||| | | ||||||  |||||||||||||| ||||||| ||||||    
T  34467641 atgtctatgatggacaaaccttaagagtggtccaccataaaccttattaagttttttaatttaaactgtttgatatttttt 34467721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 444 - 519
Target Start/End: Original strand, 34464103 - 34464178
Alignment:
Q  444 atgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgatct 519  Q
    |||||||| || |||||||||||| ||||||| |||||||| | |||||   |||||||||||||| |||||||||    
T  34464103 atgtctatcgttgaccaaccttaagagtggtccaccatagaccttattagattttttaatttaaactgtttgatct 34464178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 471 - 566
Target Start/End: Complemental strand, 36215124 - 36215030
Alignment:
Q  471 tggtctaccatagatcctattaatatttttaatttaaaccgtttgatcttttttattaaaagataaacgttagatcatgcatgtctactgtatctt 566  Q
    ||||| || ||||||||||||| | |||||||| ||||||||||||||||||||| |||   |  |  ||||||||||||||||| ||||||||||    
T  36215124 tggtccactatagatcctattatt-tttttaatataaaccgtttgatcttttttaataatgaaggattgttagatcatgcatgtccactgtatctt 36215030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 444 - 557
Target Start/End: Original strand, 21664937 - 21665051
Alignment:
Q  444 atgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgatcttttttatt-aaaagataaacgtta 542  Q
    ||||||||||||||||||| ||  | |||||| | |||||| | | ||||| | |||| ||||||  |||||||||||||| || |||| |||| | |||    
T  21664937 atgtctatggtggaccaacattgtaggtggtcaatcatagaccttgttaatttgtttagtttaaattgtttgatctttttttttgaaaatataaccatta 21665036  T
Q  543 gatcatgcatgtcta 557  Q
    |||||||||||||||    
T  21665037 gatcatgcatgtcta 21665051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 444 - 494
Target Start/End: Complemental strand, 43034451 - 43034401
Alignment:
Q  444 atgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaat 494  Q
    |||||||||||||| |||| |||| ||||||| ||||||||||||||||||    
T  43034451 atgtctatggtggatcaactttaagagtggtccaccatagatcctattaat 43034401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 451 - 492
Target Start/End: Complemental strand, 16295191 - 16295150
Alignment:
Q  451 tggtggaccaaccttaaaagtggtctaccatagatcctatta 492  Q
    ||||||||||||||||| ||||||| ||||||||||||||||    
T  16295191 tggtggaccaaccttaacagtggtccaccatagatcctatta 16295150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 340 - 388
Target Start/End: Complemental strand, 6030588 - 6030540
Alignment:
Q  340 ggcttatttgattcaatagtctctcaaataatttcaagtttttattttg 388  Q
    |||||||||||| |||||||| |||||||||||| ||||||| ||||||    
T  6030588 ggcttatttgatccaatagtccctcaaataatttgaagttttcattttg 6030540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 340 - 392
Target Start/End: Complemental strand, 7437879 - 7437827
Alignment:
Q  340 ggcttatttgattcaatagtctctcaaataatttcaagtttttattttggtcc 392  Q
    |||||||||||| |||| ||  |||||||||||||||||||| ||||||||||    
T  7437879 ggcttatttgatccaatggttgctcaaataatttcaagttttcattttggtcc 7437827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 340 - 392
Target Start/End: Complemental strand, 32470693 - 32470641
Alignment:
Q  340 ggcttatttgattcaatagtctctcaaataatttcaagtttttattttggtcc 392  Q
    |||||||||||| || ||||| |  ||||||||||||||||||||||||||||    
T  32470693 ggcttatttgatccattagtcccctaaataatttcaagtttttattttggtcc 32470641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 343 - 387
Target Start/End: Complemental strand, 43034586 - 43034542
Alignment:
Q  343 ttatttgattcaatagtctctcaaataatttcaagtttttatttt 387  Q
    |||||||||||||| ||| |||||||||||||||||||| |||||    
T  43034586 ttatttgattcaatggtccctcaaataatttcaagttttcatttt 43034542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 340 - 391
Target Start/End: Original strand, 17459251 - 17459302
Alignment:
Q  340 ggcttatttgattcaatagtctctcaaataatttcaagtttttattttggtc 391  Q
    |||||||||||| || ||||| || ||||||||||||||||| |||||||||    
T  17459251 ggcttatttgatccattagtcccttaaataatttcaagttttcattttggtc 17459302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 409 - 494
Target Start/End: Complemental strand, 17460700 - 17460616
Alignment:
Q  409 ccaaataaatcc-gacggttaaatttaactcaaatgatgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaat 494  Q
    |||||||||||| ||| ||||| |||||||  ||  |||||||||||||||||| ||||||||||||||| | |||| | |||||||    
T  17460700 ccaaataaatcccgaccgttaactttaactttaa--atgtctatggtggaccaatcttaaaagtggtctatcgtagaccttattaat 17460616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 474 - 525
Target Start/End: Complemental strand, 42249738 - 42249687
Alignment:
Q  474 tctaccatagatcctattaatatttttaatttaaaccgtttgatctttttta 525  Q
    ||||||||||||  ||||||  |||||||||| |||||||||||||||||||    
T  42249738 tctaccatagattttattaaattttttaattttaaccgtttgatctttttta 42249687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 342 - 391
Target Start/End: Original strand, 28561368 - 28561417
Alignment:
Q  342 cttatttgattcaatagtctctcaaataatttcaagtttttattttggtc 391  Q
    ||||||||||||||| ||| || ||||||||| ||||||| |||||||||    
T  28561368 cttatttgattcaatggtcccttaaataattttaagttttcattttggtc 28561417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 447 - 519
Target Start/End: Original strand, 1083125 - 1083197
Alignment:
Q  447 tctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgatct 519  Q
    ||||||||||| |||||||||||||||||||   |||| | ||||||| || ||||||| |||| || |||||    
T  1083125 tctatggtggatcaaccttaaaagtggtctattgtagaccttattaattttgttaattttaaccattcgatct 1083197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 444 - 563
Target Start/End: Complemental strand, 15850643 - 15850524
Alignment:
Q  444 atgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgatctttt-ttattaaaagataaacgtta 542  Q
    ||||||| |||| |||||| ||| | |||||| |||||||||| || ||  ||||||||||| |||| ||||||||||| ||  |||| || ||  ||||    
T  15850643 atgtctaaggtgaaccaacattataggtggtccaccatagatcttaatag-atttttaattttaaccctttgatcttttgtttataaatgagaacagtta 15850545  T
Q  543 gatcatgcatgtctactgtat 563  Q
    |||||| |||||||| |||||    
T  15850544 gatcatacatgtctattgtat 15850524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 444 - 524
Target Start/End: Original strand, 35799644 - 35799724
Alignment:
Q  444 atgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgatctttttt 524  Q
    ||||||| |||| | |||| ||| |||||||||||||||||   ||||||   || |||||| ||||||||||||||||||    
T  35799644 atgtctaaggtgaatcaactttataagtggtctaccatagactttattaaatgttataattttaaccgtttgatctttttt 35799724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 340 - 392
Target Start/End: Original strand, 43033080 - 43033132
Alignment:
Q  340 ggcttatttgattcaatagtctctcaaataatttcaagtttttattttggtcc 392  Q
    |||||||||||| ||||  || || ||||||||||||||||| ||||||||||    
T  43033080 ggcttatttgatccaatgatcccttaaataatttcaagttttcattttggtcc 43033132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 114; Significance: 2e-57; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 411 - 612
Target Start/End: Original strand, 40811422 - 40811627
Alignment:
Q  411 aaataaatcc-gacggttaaatttaactcaaatgatgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaac 509  Q
    |||||||||| ||||||||| |||||| |||||||||||||||||||||||||||||| ||||||| ||||||||| |||||||||||||||||||||||    
T  40811422 aaataaatcctgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagattctattaatatttttaatttaaac 40811521  T
Q  510 cgtttgatcttttttattaaaagataaacgttagatcatgcatgtctactgtatctttc-acgagtcaac-acacttaa-gttttttcccatctcatcat 606  Q
    |||||||||||||||||||||||||||  ||||||||||| ||||||| |||||||| |   |||||||| ||||||||  ||||||||||| || ||||    
T  40811522 cgtttgatcttttttattaaaagataattgttagatcatgaatgtctattgtatcttcctgtgagtcaacaacacttaactttttttcccatttcttcat 40811621  T
Q  607 cttcat 612  Q
    ||||||    
T  40811622 cttcat 40811627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 444 - 566
Target Start/End: Complemental strand, 669369 - 669248
Alignment:
Q  444 atgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgatcttttttattaaaagataaacgttag 543  Q
    ||||||||||||||||| | |||| ||||||| |||||||||||||||||| || ||||||||||||||||||||||||||| ||||||||||  |||||    
T  669369 atgtctatggtggaccatc-ttaagagtggtccaccatagatcctattaattttgttaatttaaaccgtttgatcttttttaataaaagataactgttag 669271  T
Q  544 atcatgcatgtctactgtatctt 566  Q
    ||||||||||| || ||||||||    
T  669270 atcatgcatgtttattgtatctt 669248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 405 - 522
Target Start/End: Complemental strand, 43460843 - 43460725
Alignment:
Q  405 tttgccaaataaatccg-acggttaaatttaactcaaatgatgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaat 503  Q
    ||||||||||||||||  || ||||| |||||||||||| ||||||||||||||||||| |||| ||||||| ||||||||||||||||||  |||||||    
T  43460843 tttgccaaataaatcctcacagttaagtttaactcaaattatgtctatggtggaccaactttaagagtggtccaccatagatcctattaattattttaat 43460744  T
Q  504 ttaaaccgtttgatctttt 522  Q
    ||||||| |||||||||||    
T  43460743 ttaaaccctttgatctttt 43460725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 444 - 566
Target Start/End: Original strand, 46201266 - 46201388
Alignment:
Q  444 atgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgatcttttttattaaaagataaacgttag 543  Q
    |||||||||||| ||||||||||| ||||||| |||||||||| |||||||  ||||||| ||||| |||||| ||||||||||||||||  | ||||||    
T  46201266 atgtctatggtgaaccaaccttaagagtggtccaccatagatcatattaattattttaatataaactgtttgaccttttttattaaaagagtaccgttag 46201365  T
Q  544 atcatgcatgtctactgtatctt 566  Q
    ||||||||||||||| |||||||    
T  46201366 atcatgcatgtctaccgtatctt 46201388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 405 - 523
Target Start/End: Original strand, 32255085 - 32255205
Alignment:
Q  405 tttgccaaataaatcc-gacggttaaatttaactc-aaatgatgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaa 502  Q
    |||||||||||||||| ||||||||| |||||| | ||||||||| ||||||||||||||||||| ||||||| ||||||||||||||||||  ||||||    
T  32255085 tttgccaaataaatcccgacggttaagtttaaccccaaatgatgtttatggtggaccaaccttaagagtggtccaccatagatcctattaattattttaa 32255184  T
Q  503 tttaaaccgtttgatcttttt 523  Q
    ||| ||||||||||| |||||    
T  32255185 tttcaaccgtttgattttttt 32255205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 405 - 525
Target Start/End: Original strand, 22537655 - 22537776
Alignment:
Q  405 tttgccaaataaatccgacggttaaatttaac-tcaaatgatgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaat 503  Q
    |||||||||||||||| || ||||| |||||| ||||||||||| || |||| ||||||||||| |||| || ||||||||||||||||||  |||||||    
T  22537655 tttgccaaataaatccaactgttaattttaacctcaaatgatgtttacggtgaaccaaccttaatagtgatccaccatagatcctattaattattttaat 22537754  T
Q  504 ttaaaccgtttgatctttttta 525  Q
    |||||||||||||| |||||||    
T  22537755 ttaaaccgtttgatttttttta 22537776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 444 - 534
Target Start/End: Original strand, 2414880 - 2414970
Alignment:
Q  444 atgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgatcttttttattaaaagat 534  Q
    ||||||||  |||||||||||||||||||||| |||||||||||||||||| || ||||||||||||||||||  ||||||||||||||||    
T  2414880 atgtctataatggaccaaccttaaaagtggtccaccatagatcctattaattttcttaatttaaaccgtttgaatttttttattaaaagat 2414970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 496 - 610
Target Start/End: Original strand, 45454196 - 45454311
Alignment:
Q  496 tttttaatttaaaccgtttgatcttttttattaaaagataaacgttagatcatgcatgtctactgtatctttcacgagtcaac-acacttaagttttttc 594  Q
    |||||||||||| ||||||||||||||| |||||||||  | |||||||| |||||| ||||||||||||| || |||||||| |||||| | |||||||    
T  45454196 tttttaatttaagccgtttgatctttttaattaaaagaggatcgttagattatgcatatctactgtatcttccatgagtcaacaacacttgatttttttc 45454295  T
Q  595 ccatctcatcatcttc 610  Q
    |||| || ||||||||    
T  45454296 ccatttcttcatcttc 45454311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 405 - 517
Target Start/End: Complemental strand, 11502442 - 11502328
Alignment:
Q  405 tttgccaaataaatccga-cggttaaatttaac-tcaaatgatgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaa 502  Q
    |||||||||||||||| | | ||||| |||||| |||||||||||||||||| |||||||||||| ||||||| ||||||||||||| ||||  ||||||    
T  11502442 tttgccaaataaatcccaacagttaagtttaacctcaaatgatgtctatggtagaccaaccttaagagtggtccaccatagatcctagtaattattttaa 11502343  T
Q  503 tttaaaccgtttgat 517  Q
    ||| | |||||||||    
T  11502342 tttcagccgtttgat 11502328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 444 - 533
Target Start/End: Original strand, 44372864 - 44372953
Alignment:
Q  444 atgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgatcttttttattaaaaga 533  Q
    |||||||| |||||| ||| |||| ||||||| ||||||||||||||||||  |||||||| ||||||||||||||||||| ||||||||    
T  44372864 atgtctatagtggactaacattaagagtggtccaccatagatcctattaattattttaattaaaaccgtttgatcttttttcttaaaaga 44372953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 444 - 533
Target Start/End: Original strand, 44381720 - 44381809
Alignment:
Q  444 atgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgatcttttttattaaaaga 533  Q
    |||||||| |||||| ||| |||| ||||||| ||||||||||||||||||  |||||||| ||||||||||||||||||| ||||||||    
T  44381720 atgtctatagtggactaacattaagagtggtccaccatagatcctattaattattttaattaaaaccgtttgatcttttttcttaaaaga 44381809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 451 - 519
Target Start/End: Original strand, 35295841 - 35295909
Alignment:
Q  451 tggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgatct 519  Q
    ||||||||||||||||| ||||||| ||||||||||||||||||  |||||||||||||||||||||||    
T  35295841 tggtggaccaaccttaagagtggtccaccatagatcctattaattattttaatttaaaccgtttgatct 35295909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 405 - 566
Target Start/End: Original strand, 22336075 - 22336235
Alignment:
Q  405 tttgccaaataaatcc-gacggttaaatttaactc-aaatgatgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaa 502  Q
    |||||||||||||||| ||  ||||| |||||| | |||||||| |||||||||| ||||||||||||||||| ||||||||||||||||||  ||||||    
T  22336075 tttgccaaataaatcccgaatgttaagtttaaccccaaatgatg-ctatggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaa 22336173  T
Q  503 tttaaaccgtttgatcttttttattaaaagataaacgttagatcatgcatgtctactgtatctt 566  Q
    ||| ||||| ||||| |||||| | ||||||||| | ||||||  |||| ||||| | ||||||    
T  22336174 tttcaaccg-ttgatatttttt-taaaaagataaccattagattgtgcaagtctattttatctt 22336235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 444 - 525
Target Start/End: Original strand, 16756006 - 16756087
Alignment:
Q  444 atgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgatctttttta 525  Q
    |||||||||||| | ||||||||||||| ||||||||||||||||||||||  ||||||||| |||| |||||| |||||||    
T  16756006 atgtctatggtgaaacaaccttaaaagttgtctaccatagatcctattaattattttaattttaaccatttgatttttttta 16756087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 444 - 524
Target Start/End: Original strand, 41328354 - 41328434
Alignment:
Q  444 atgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgatctttttt 524  Q
    |||||||||||||| |||| |||||| ||||| ||||||||||||||||||  || |||||||||||||||||| ||||||    
T  41328354 atgtctatggtggaacaactttaaaaatggtccaccatagatcctattaattattctaatttaaaccgtttgatatttttt 41328434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 405 - 513
Target Start/End: Complemental strand, 13564259 - 13564150
Alignment:
Q  405 tttgccaaataaatcc-gacggttaaatttaactc-aaatgatgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaa 502  Q
    |||||||||||||||| |||| |||| |||||| | |||| |||||||||||||| || |||||| ||||||| ||||||||||||||||||  ||||||    
T  13564259 tttgccaaataaatcccgacg-ttaagtttaaccccaaataatgtctatggtggatcatccttaagagtggtccaccatagatcctattaattattttaa 13564161  T
Q  503 tttaaaccgtt 513  Q
    ||| |||||||    
T  13564160 tttgaaccgtt 13564150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 444 - 522
Target Start/End: Original strand, 39981452 - 39981530
Alignment:
Q  444 atgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgatctttt 522  Q
    ||||||||||||||||||| |||||| ||||| ||||||||||| ||||||  || |||||||||||||||||| ||||    
T  39981452 atgtctatggtggaccaactttaaaaatggtccaccatagatccaattaattattctaatttaaaccgtttgatttttt 39981530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 444 - 532
Target Start/End: Original strand, 28325204 - 28325292
Alignment:
Q  444 atgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgatcttttttattaaaag 532  Q
    ||||||| ||||||||||| ||  | |||||||||||||||   |||||| ||||| ||||||||||||||||||||||||||| ||||    
T  28325204 atgtctaaggtggaccaactttgtaggtggtctaccatagactttattaaaattttaaatttaaaccgtttgatcttttttatttaaag 28325292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 471 - 566
Target Start/End: Original strand, 5095228 - 5095323
Alignment:
Q  471 tggtctaccatagatcctattaatatttttaatttaaaccgtttgatcttttttattaaaagataaacgttagatcatgcatgtctactgtatctt 566  Q
    ||||| || ||||||||||||| | |||||||| ||||||||||||||||||||| ||||  |  |  ||||||||||||||||| ||||||||||    
T  5095228 tggtccactatagatcctattattttttttaatataaaccgtttgatcttttttaataaagaaggattgttagatcatgcatgtccactgtatctt 5095323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 471 - 566
Target Start/End: Original strand, 24051365 - 24051460
Alignment:
Q  471 tggtctaccatagatcctattaatatttttaatttaaaccgtttgatcttttttattaaaagataaacgttagatcatgcatgtctactgtatctt 566  Q
    ||||| || ||||||||||||| | |||||||| ||||||||||||||||||||| ||||  |  |  ||||||||||||||||| ||||||||||    
T  24051365 tggtccactatagatcctattattttttttaatataaaccgtttgatcttttttaataaagaaggattgttagatcatgcatgtccactgtatctt 24051460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 479 - 566
Target Start/End: Original strand, 39752318 - 39752405
Alignment:
Q  479 catagatcctattaatatttttaatttaaaccgtttgatcttttttattaaaagataaacgttagatcatgcatgtctactgtatctt 566  Q
    |||||||||||||| | |||||||| ||||||||||||||||||||| ||||  |  |  ||||||||||||||||| ||||||||||    
T  39752318 catagatcctattattttttttaatataaaccgtttgatcttttttaataaagaaggattgttagatcatgcatgtccactgtatctt 39752405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 405 - 530
Target Start/End: Original strand, 47454433 - 47454557
Alignment:
Q  405 tttgccaaataaatcc-gacggttaaatttaactcaaatgatgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaat 503  Q
    |||||||||||||||| |||  |||| |||||||| ||  ||||||||||| |||||||||||| ||||||| | | |||| | ||||||| || |||||    
T  47454433 tttgccaaataaatcccgactattaactttaactctaa--atgtctatggtagaccaaccttaagagtggtccatcgtagaccttattaattttattaat 47454530  T
Q  504 ttaaaccgtttgatcttttttattaaa 530  Q
    || ||||||||||| |||||| |||||    
T  47454531 tttaaccgtttgatttttttttttaaa 47454557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 405 - 482
Target Start/End: Original strand, 41078852 - 41078930
Alignment:
Q  405 tttgccaaataaatcc-gacggttaaatttaactcaaatgatgtctatggtggaccaaccttaaaagtggtctaccata 482  Q
    |||||| ||||||||| ||||||||| |||||| |||||||||| ||||||||||||| ||||||| ||||| ||||||    
T  41078852 tttgccgaataaatcccgacggttaactttaacccaaatgatgtatatggtggaccaatcttaaaaatggtccaccata 41078930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 444 - 524
Target Start/End: Original strand, 43441481 - 43441561
Alignment:
Q  444 atgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgatctttttt 524  Q
    |||||||||||| ||||||||||| ||||||| ||||||  ||||||||||  ||||||| ||||| ||||||| ||||||    
T  43441481 atgtctatggtgtaccaaccttaagagtggtccaccataagtcctattaattattttaatgtaaactgtttgatatttttt 43441561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 471 - 532
Target Start/End: Original strand, 48312202 - 48312262
Alignment:
Q  471 tggtctaccatagatcctattaatatttttaatttaaaccgtttgatcttttttattaaaag 532  Q
    ||||| |||||||||||||||||| |||||||||||||  |||||||||||||| |||||||    
T  48312202 tggtccaccatagatcctattaat-tttttaatttaaatggtttgatctttttttttaaaag 48312262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 444 - 524
Target Start/End: Complemental strand, 30334622 - 30334543
Alignment:
Q  444 atgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgatctttttt 524  Q
    |||||||||| |||||||| |||| |   ||| |||||||||||||||||| |||||||||||||||||| ||| ||||||    
T  30334622 atgtctatggaggaccaactttaagaacagtccaccatagatcctattaat-tttttaatttaaaccgttagatttttttt 30334543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 340 - 392
Target Start/End: Complemental strand, 32256513 - 32256461
Alignment:
Q  340 ggcttatttgattcaatagtctctcaaataatttcaagtttttattttggtcc 392  Q
    |||||||||||| |||| ||| |||||||||||||||||||| ||||||||||    
T  32256513 ggcttatttgatccaatggtccctcaaataatttcaagttttcattttggtcc 32256461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 340 - 392
Target Start/End: Original strand, 40811338 - 40811390
Alignment:
Q  340 ggcttatttgattcaatagtctctcaaataatttcaagtttttattttggtcc 392  Q
    |||||||||||| |||| ||| |||||||||||||||||||| ||||||||||    
T  40811338 ggcttatttgatccaatggtccctcaaataatttcaagttttcattttggtcc 40811390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 340 - 392
Target Start/End: Complemental strand, 47456493 - 47456441
Alignment:
Q  340 ggcttatttgattcaatagtctctcaaataatttcaagtttttattttggtcc 392  Q
    |||||||||||| |||| ||| |||||||||||||||||||| ||||||||||    
T  47456493 ggcttatttgatccaatggtccctcaaataatttcaagttttcattttggtcc 47456441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 405 - 474
Target Start/End: Original strand, 11501276 - 11501344
Alignment:
Q  405 tttgccaaataaatcc-gacggttaaatttaactcaaatgatgtctatggtggaccaaccttaaaagtggt 474  Q
    |||||||||||||||| ||| ||||| |||||||  ||  |||||||||||||||||||||||||||||||    
T  11501276 tttgccaaataaatcccgactgttaactttaacttcaa--atgtctatggtggaccaaccttaaaagtggt 11501344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 438 - 509
Target Start/End: Original strand, 46835805 - 46835876
Alignment:
Q  438 caaatgatgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaac 509  Q
    |||||||||| ||||||||| ||  ||||||  |||||||||||| |||||||||||  |||||||||||||    
T  46835805 caaatgatgtttatggtggatcattcttaaagttggtctaccatatatcctattaattattttaatttaaac 46835876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 444 - 494
Target Start/End: Original strand, 15992270 - 15992320
Alignment:
Q  444 atgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaat 494  Q
    |||||||||||||||||||||||| |||| | ||||| |||||||||||||    
T  15992270 atgtctatggtggaccaaccttaagagtgatttaccaaagatcctattaat 15992320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 405 - 505
Target Start/End: Complemental strand, 22337391 - 22337292
Alignment:
Q  405 tttgccaaataaatcc-gacggttaaatttaactcaaatgatgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaat 503  Q
    |||||||||||||||| ||| |||||||||||||  ||  ||||||||||||||||||||||||| || ||  ||| |||| | ||||||| || |||||    
T  22337391 tttgccaaataaatcctgaccgttaaatttaacttcaa--atgtctatggtggaccaaccttaaatgtagtacaccgtagaccttattaattttgttaat 22337294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 516 - 566
Target Start/End: Original strand, 41078931 - 41078981
Alignment:
Q  516 atcttttttattaaaagataaacgttagatcatgcatgtctactgtatctt 566  Q
    ||||||||||||||||||| |  ||||||||||||||||||| ||||||||    
T  41078931 atcttttttattaaaagatgattgttagatcatgcatgtctattgtatctt 41078981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 444 - 533
Target Start/End: Original strand, 40508513 - 40508602
Alignment:
Q  444 atgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgatcttttttattaaaaga 533  Q
    |||||||||||||| ||| ||||| ||| ||| |||||||||   |||||| |||| ||||| ||||||||||| | |||| ||||||||    
T  40508513 atgtctatggtggatcaatcttaagagttgtccaccatagatttcattaattttttaaattttaaccgtttgatatgtttttttaaaaga 40508602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 446 - 532
Target Start/End: Original strand, 47059246 - 47059334
Alignment:
Q  446 gtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttt--taatttaaaccgtttgatcttttttattaaaag 532  Q
    |||||||||||| ||||||||| ||| | | |||||||| | ||||||| ||||  |||||||||||||||||||| |||  |||||||    
T  47059246 gtctatggtggagcaaccttaagagtagcccaccatagaccttattaatttttttttaatttaaaccgtttgatctgtttatttaaaag 47059334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 340 - 388
Target Start/End: Complemental strand, 6173568 - 6173520
Alignment:
Q  340 ggcttatttgattcaatagtctctcaaataatttcaagtttttattttg 388  Q
    |||||||||||| |||| ||| |||||||||||||||||||| ||||||    
T  6173568 ggcttatttgatccaatggtccctcaaataatttcaagttttcattttg 6173520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 410 - 524
Target Start/End: Complemental strand, 9662251 - 9662139
Alignment:
Q  410 caaataaatcc-gacggttaaatttaactcaaatgatgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaa 508  Q
    ||||||||||| ||| |||||||||||||  ||  ||||||||||||||||||| ||| |  | ||| |||||||| | ||||||| |||| ||||| ||    
T  9662251 caaataaatccagactgttaaatttaacttcaa--atgtctatggtggaccaacattatagatagtccaccatagaccttattaat-ttttcaattttaa 9662155  T
Q  509 ccgtttgatctttttt 524  Q
    || |||||||||||||    
T  9662154 ccatttgatctttttt 9662139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 340 - 392
Target Start/End: Original strand, 30310119 - 30310171
Alignment:
Q  340 ggcttatttgattcaatagtctctcaaataatttcaagtttttattttggtcc 392  Q
    |||||||||||| |||||||| || ||||||||||||||||| ||||| ||||    
T  30310119 ggcttatttgatccaatagtcccttaaataatttcaagttttcatttttgtcc 30310171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 340 - 392
Target Start/End: Original strand, 32602931 - 32602983
Alignment:
Q  340 ggcttatttgattcaatagtctctcaaataatttcaagtttttattttggtcc 392  Q
    |||||||||||| || | |||  ||||||||||||||||||||||||||||||    
T  32602931 ggcttatttgatccattggtccttcaaataatttcaagtttttattttggtcc 32602983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 470 - 524
Target Start/End: Original strand, 7346072 - 7346125
Alignment:
Q  470 gtggtctaccatagatcctattaatatttttaatttaaaccgtttgatctttttt 524  Q
    ||||||||||||||| ||||||||  |||||||||| ||| ||||||||||||||    
T  7346072 gtggtctaccataga-cctattaaattttttaattttaactgtttgatctttttt 7346125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 444 - 522
Target Start/End: Complemental strand, 22115145 - 22115067
Alignment:
Q  444 atgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgatctttt 522  Q
    |||||||| ||||||||||||||| ||||||| ||||||||    |||||| |||| |||||  || ||||||||||||    
T  22115145 atgtctatagtggaccaaccttaagagtggtccaccatagacttcattaattttttaaattttgactgtttgatctttt 22115067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 444 - 522
Target Start/End: Complemental strand, 40509715 - 40509637
Alignment:
Q  444 atgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgatctttt 522  Q
    |||||||| ||||||||||||||| ||||||| ||||||||    |||||| |||| |||||  || ||||||||||||    
T  40509715 atgtctatagtggaccaaccttaagagtggtccaccatagacttcattaattttttaaattttgactgtttgatctttt 40509637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 444 - 564
Target Start/End: Complemental strand, 35484294 - 35484174
Alignment:
Q  444 atgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgatctttt-ttattaaaagataaacgtta 542  Q
    ||||||| |||| |||||| ||| | |||||| |||||||||| || ||  ||||||||||| |||| ||||||||||| ||  |||| || ||  ||||    
T  35484294 atgtctaaggtgaaccaacattataggtggtccaccatagatcttaatag-atttttaattttaaccctttgatcttttgtttataaatgagaacagtta 35484196  T
Q  543 gatcatgcatgtctactgtatc 564  Q
    |||||| |||||||| ||||||    
T  35484195 gatcatacatgtctattgtatc 35484174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 443 - 519
Target Start/End: Original strand, 3413666 - 3413742
Alignment:
Q  443 gatgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgatct 519  Q
    ||||||||||||||| ||| ||||| ||| ||| ||||||||    |||||| |||| ||||| |||||||||||||    
T  3413666 gatgtctatggtggatcaatcttaagagttgtccaccatagacttcattaattttttaaattttaaccgtttgatct 3413742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 405 - 475
Target Start/End: Complemental strand, 32256415 - 32256346
Alignment:
Q  405 tttgccaaataaat-ccgacggttaaatttaactcaaatgatgtctatggtggaccaaccttaaaagtggtc 475  Q
    |||||||||||||| || || ||||| |||||||  ||  ||||||||||||||||||| ||||||||||||    
T  32256415 tttgccaaataaattccaaccgttaactttaacttcaa--atgtctatggtggaccaacattaaaagtggtc 32256346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 340 - 392
Target Start/End: Complemental strand, 40509852 - 40509800
Alignment:
Q  340 ggcttatttgattcaatagtctctcaaataatttcaagtttttattttggtcc 392  Q
    |||||||||| |||||| ||| |  ||||||||||||||||| ||||||||||    
T  40509852 ggcttatttgtttcaatggtcccctaaataatttcaagttttcattttggtcc 40509800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 340 - 392
Target Start/End: Original strand, 43459453 - 43459505
Alignment:
Q  340 ggcttatttgattcaatagtctctcaaataatttcaagtttttattttggtcc 392  Q
    |||||||||||| || ||||| |  ||||||||||||||||| ||||||||||    
T  43459453 ggcttatttgatccattagtcccctaaataatttcaagttttcattttggtcc 43459505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 405 - 519
Target Start/End: Original strand, 43459551 - 43459664
Alignment:
Q  405 tttgccaaataaatc-cgacggttaaatttaactcaaatgatgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaat 503  Q
    ||||||||||||||| || | ||||| |||||||| ||  |||||||||||||| ||||||||||| ||||  | | |||| | ||||||| || |||||    
T  43459551 tttgccaaataaatctcggctgttaagtttaactccaa--atgtctatggtggatcaaccttaaaaatggtacatcgtagaccttattaattttgttaat 43459648  T
Q  504 ttaaaccgtttgatct 519  Q
    || |||| || |||||    
T  43459649 tttaaccattcgatct 43459664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 340 - 392
Target Start/End: Original strand, 47454335 - 47454387
Alignment:
Q  340 ggcttatttgattcaatagtctctcaaataatttcaagtttttattttggtcc 392  Q
    |||||||||||| || | ||| |||||||||||||||| ||| ||||||||||    
T  47454335 ggcttatttgatccagtggtccctcaaataatttcaagctttcattttggtcc 47454387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 108; Significance: 6e-54; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 384 - 559
Target Start/End: Complemental strand, 27705361 - 27705182
Alignment:
Q  384 ttttggtccatcagattttcct----ttgccaaataaatcc-gacggttaaatttaactcaaatgatgtctatggtggaccaaccttaaaagtggtctac 478  Q
    ||||||||| ||||||||||||    ||||||||||||| | ||| ||||| |||||  |||||||||||||||||||||||||||||||||||||| ||    
T  27705361 ttttggtccctcagattttcctccttttgccaaataaatacagacagttaactttaatccaaatgatgtctatggtggaccaaccttaaaagtggtccac 27705262  T
Q  479 catagatcctattaatatttttaatttaaaccgtttgatcttttttattaaaagataaacgttagatcatgcatgtctact 559  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| | ||||||||| ||||||||||||    
T  27705261 catagatcctattaatatttttaatttaaaccgtttgatattttttattaaaagatgatcgttagatc-tgcatgtctact 27705182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 405 - 524
Target Start/End: Original strand, 22047828 - 22047949
Alignment:
Q  405 tttgccaaataaatcc-gacggttaaatttaactc-aaatgatgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaa 502  Q
    |||||||||||||||| | | ||||| |||||||| ||||||||||||||||||| ||||||||| ||||||| |||||| ||||||| |||  ||||||    
T  22047828 tttgccaaataaatcctggctgttaagtttaactctaaatgatgtctatggtggatcaaccttaagagtggtccaccataaatcctatgaattattttaa 22047927  T
Q  503 tttaaaccgtttgatctttttt 524  Q
    ||||||||||||||| ||||||    
T  22047928 tttaaaccgtttgatttttttt 22047949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 405 - 524
Target Start/End: Original strand, 39603949 - 39604070
Alignment:
Q  405 tttgccaaataaatcc-gacggttaaatttaactc-aaatgatgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaa 502  Q
    |||||||||||||||  ||| ||||| |||||| | |||||||||||||||| ||||||||||||||||| || ||||||||||||||||||  ||||||    
T  39603949 tttgccaaataaatcatgactgttaagtttaaccccaaatgatgtctatggtagaccaaccttaaaagtgatccaccatagatcctattaattattttaa 39604048  T
Q  503 tttaaaccgtttgatctttttt 524  Q
    ||||||| ||||||| ||||||    
T  39604049 tttaaactgtttgatttttttt 39604070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 438 - 517
Target Start/End: Complemental strand, 30859157 - 30859078
Alignment:
Q  438 caaatgatgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgat 517  Q
    |||||||||||||||||||||||| ||||| ||||||| ||||||||||||||||||  |||||||||||||||||||||    
T  30859157 caaatgatgtctatggtggaccaatcttaagagtggtccaccatagatcctattaattattttaatttaaaccgtttgat 30859078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 409 - 516
Target Start/End: Original strand, 30910841 - 30910950
Alignment:
Q  409 ccaaataaatc-cgacggttaaatttaactc-aaatgatgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaattta 506  Q
    ||||||||||| |||| ||||| |||||| | ||||||||||| ||||||||||||||||| ||||||| ||||||||||||||||||  |||||||||     
T  30910841 ccaaataaatctcgactgttaactttaacaccaaatgatgtctttggtggaccaaccttaagagtggtccaccatagatcctattaattattttaatttc 30910940  T
Q  507 aaccgtttga 516  Q
    ||||||||||    
T  30910941 aaccgtttga 30910950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 444 - 524
Target Start/End: Original strand, 1102753 - 1102833
Alignment:
Q  444 atgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgatctttttt 524  Q
    ||||||||||| |||||||||||| ||||||| |||||||||| |||||||  ||||||||||||||||||||||||||||    
T  1102753 atgtctatggtagaccaaccttaagagtggtccaccatagatcttattaattattttaatttaaaccgtttgatctttttt 1102833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 405 - 524
Target Start/End: Complemental strand, 325205 - 325087
Alignment:
Q  405 tttgccaaataaatcc-gacggttaaatttaactcaaatgatgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaat 503  Q
    |||||||||||||||| ||| ||||| |||||||| ||  |||||||||||||||||||||||| ||||||| | | |||| | ||||||| || |||||    
T  325205 tttgccaaataaatcccgactgttaactttaactctaa--atgtctatggtggaccaaccttaatagtggtccatcgtagaccttattaattttgttaat 325108  T
Q  504 ttaaaccgtttgatctttttt 524  Q
    || ||||||||||||||||||    
T  325107 tttaaccgtttgatctttttt 325087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 448 - 524
Target Start/End: Original strand, 11262532 - 11262608
Alignment:
Q  448 ctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgatctttttt 524  Q
    |||||||||||||||||||| ||||||| ||||||||||||||||||  || ||||||||||| |||||||||||||    
T  11262532 ctatggtggaccaaccttaagagtggtccaccatagatcctattaattattataatttaaaccatttgatctttttt 11262608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 410 - 524
Target Start/End: Complemental strand, 1010379 - 1010267
Alignment:
Q  410 caaataaatcc-gacggttaaatttaactcaaatgatgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaa 508  Q
    ||||||||||| ||||||||| |||||| | ||  |||| ||||||||||||||||||| |||||||  ||||||||||||||||| | |||||||| ||    
T  1010379 caaataaatcccgacggttaactttaaccccaa--atgtgtatggtggaccaaccttaagagtggtccgccatagatcctattaat-tatttaatttcaa 1010283  T
Q  509 ccgtttgatctttttt 524  Q
    || |||||||| ||||    
T  1010282 ccctttgatctatttt 1010267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 410 - 524
Target Start/End: Original strand, 8521356 - 8521468
Alignment:
Q  410 caaataaatcc-gacggttaaatttaactcaaatgatgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaa 508  Q
    ||||||||||| ||||||||| |||||| | ||  |||| ||||||||||||||||||| | ||||| |||||||||||||||||| | |||||||| ||    
T  8521356 caaataaatcccgacggttaactttaaccccaa--atgtgtatggtggaccaaccttaagaatggtccaccatagatcctattaat-tatttaatttcaa 8521452  T
Q  509 ccgtttgatctttttt 524  Q
    || |||||||| ||||    
T  8521453 ccctttgatctatttt 8521468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 471 - 566
Target Start/End: Original strand, 28393375 - 28393470
Alignment:
Q  471 tggtctaccatagatcctattaatatttttaatttaaaccgtttgatcttttttattaaaagataaacgttagatcatgcatgtctactgtatctt 566  Q
    ||||| || ||||||||||||| | |||||||| ||||||||||||||||||||| ||||  |  |  ||||||||||||||||| ||||||||||    
T  28393375 tggtccactatagatcctattattttttttaatataaaccgtttgatcttttttaataaagaaggattgttagatcatgcatgtccactgtatctt 28393470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 471 - 566
Target Start/End: Original strand, 31171014 - 31171109
Alignment:
Q  471 tggtctaccatagatcctattaatatttttaatttaaaccgtttgatcttttttattaaaagataaacgttagatcatgcatgtctactgtatctt 566  Q
    ||||| || ||||||||||||| | |||||||| ||||||||||||||||||||| ||||  |  |  ||||||||||||||||| ||||||||||    
T  31171014 tggtccactatagatcctattattttttttaatataaaccgtttgatcttttttaataaagaaggattgttagatcatgcatgtccactgtatctt 31171109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 444 - 522
Target Start/End: Complemental strand, 33173941 - 33173862
Alignment:
Q  444 atgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatattttt-aatttaaaccgtttgatctttt 522  Q
    |||||||||||||||||||||||| ||||||||||||||||    |||||| ||||| ||||| ||||||||||||||||    
T  33173941 atgtctatggtggaccaaccttaagagtggtctaccatagacttcattaatttttttaaattttaaccgtttgatctttt 33173862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 444 - 557
Target Start/End: Complemental strand, 22308780 - 22308667
Alignment:
Q  444 atgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgatcttttttattaaaagataaacgttag 543  Q
    |||||||||||||||| ||||||| ||||||| ||||||||   ||||||  |||||||| |||||| |||||||| |||| | ||||||| | | || |    
T  22308780 atgtctatggtggacctaccttaagagtggtccaccatagacattattaaattttttaatgtaaaccatttgatctgttttttaaaaagatgaccattgg 22308681  T
Q  544 atcatgcatgtcta 557  Q
    || |||||||||||    
T  22308680 attatgcatgtcta 22308667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 444 - 532
Target Start/End: Original strand, 223358 - 223446
Alignment:
Q  444 atgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgatcttttttattaaaag 532  Q
    ||||||| |||| |||||| ||  | |||||||||||||||   ||||||  |||||||||||||||||||||||||||||||| ||||    
T  223358 atgtctaaggtgaaccaactttgtaggtggtctaccatagactttattaaattttttaatttaaaccgtttgatcttttttatttaaag 223446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 405 - 525
Target Start/End: Original strand, 15548333 - 15548459
Alignment:
Q  405 tttgccaaataaatcc-gacggttaaatttaactc-aaatgatgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaat--at--tt 498  Q
    |||||||||||||||| | | ||||| |||||| | ||||||||||| ||||||||||||||||| | || || |||||| |||||||||||  ||  ||    
T  15548333 tttgccaaataaatcctgcctgttaagtttaaccctaaatgatgtctctggtggaccaaccttaagaatgatccaccataaatcctattaattaattatt 15548432  T
Q  499 ttaatttaaaccgtttgatctttttta 525  Q
    |||||||||||| |||||| |||||||    
T  15548433 ttaatttaaaccatttgatttttttta 15548459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 340 - 392
Target Start/End: Complemental strand, 30859290 - 30859238
Alignment:
Q  340 ggcttatttgattcaatagtctctcaaataatttcaagtttttattttggtcc 392  Q
    ||||||||||||||| ||||| |||||||||||||||||||| ||||||||||    
T  30859290 ggcttatttgattcattagtccctcaaataatttcaagttttcattttggtcc 30859238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 449 - 494
Target Start/End: Original strand, 1009325 - 1009370
Alignment:
Q  449 tatggtggaccaaccttaaaagtggtctaccatagatcctattaat 494  Q
    ||||||||||||||||||| ||||||| ||||||||||||||||||    
T  1009325 tatggtggaccaaccttaagagtggtccaccatagatcctattaat 1009370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 470 - 523
Target Start/End: Complemental strand, 20539301 - 20539248
Alignment:
Q  470 gtggtctaccatagatcctattaatatttttaatttaaaccgtttgatcttttt 523  Q
    |||||||| |||||| | ||||||| ||||||||||||||||||||||||||||    
T  20539301 gtggtctatcatagaccttattaatttttttaatttaaaccgtttgatcttttt 20539248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 449 - 524
Target Start/End: Complemental strand, 36898957 - 36898882
Alignment:
Q  449 tatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgatctttttt 524  Q
    |||||||| |||||||||||||| ||| ||||||||| || |||||  ||||| |||||||| |||||| ||||||    
T  36898957 tatggtggcccaaccttaaaagtagtccaccatagattctgttaattattttagtttaaaccctttgatttttttt 36898882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 341 - 392
Target Start/End: Complemental strand, 41798064 - 41798013
Alignment:
Q  341 gcttatttgattcaatagtctctcaaataatttcaagtttttattttggtcc 392  Q
    ||||||||||| || | ||| |||||||||||||||||||||||||||||||    
T  41798064 gcttatttgatccattggtccctcaaataatttcaagtttttattttggtcc 41798013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 447 - 517
Target Start/End: Original strand, 10735901 - 10735971
Alignment:
Q  447 tctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgat 517  Q
    |||||||||||||||| |||| ||  ||| |||||||||| |||||||  |||||||||||||||| ||||    
T  10735901 tctatggtggaccaacgttaacagcagtccaccatagatcatattaattattttaatttaaaccgtctgat 10735971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 484 - 566
Target Start/End: Original strand, 41874154 - 41874236
Alignment:
Q  484 atcctattaatatttttaatttaaaccgtttgatcttttttattaaaagataaacgttagatcatgcatgtctactgtatctt 566  Q
    ||||||||| | |||||||| ||||||||||||||||||||| ||||  |  |  |||||||||||||| || ||||||||||    
T  41874154 atcctattattttttttaatataaaccgtttgatcttttttaataaagaaggattgttagatcatgcatatccactgtatctt 41874236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 444 - 517
Target Start/End: Complemental strand, 4127234 - 4127161
Alignment:
Q  444 atgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgat 517  Q
    ||||||||| | || ||| ||||||||||||| |||||||||||| |||||   ||||||||||||| ||||||    
T  4127234 atgtctatgatagatcaatcttaaaagtggtccaccatagatcctgttaattaatttaatttaaaccatttgat 4127161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 342 - 391
Target Start/End: Complemental strand, 27705432 - 27705383
Alignment:
Q  342 cttatttgattcaatagtctctcaaataatttcaagtttttattttggtc 391  Q
    ||||||||||||||| ||  |||||||||||||||||||| |||||||||    
T  27705432 cttatttgattcaatggttcctcaaataatttcaagttttcattttggtc 27705383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 405 - 504
Target Start/End: Complemental strand, 30912182 - 30912084
Alignment:
Q  405 tttgccaaataaatccgacg-gttaaatttaactcaaatgatgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaat 503  Q
    |||||||||||||||| | | ||||| |||||||| ||  || ||||||||||||||||||||||||||||  | |||||| | ||||||| || |||||    
T  30912182 tttgccaaataaatcccaagtgttaactttaactccaa--atatctatggtggaccaaccttaaaagtggtacatcatagaccttattaattttgttaat 30912085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 340 - 392
Target Start/End: Complemental strand, 325303 - 325251
Alignment:
Q  340 ggcttatttgattcaatagtctctcaaataatttcaagtttttattttggtcc 392  Q
    ||||||||||||  ||| ||| |||||||||||||||||||| ||||||||||    
T  325303 ggcttatttgatctaatggtccctcaaataatttcaagttttcattttggtcc 325251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 343 - 525
Target Start/End: Original strand, 324068 - 324255
Alignment:
Q  343 ttatttgattcaatagtctctcaaataatttcaagtttttattttggtccatcagattttcctt-----tgccaaataaat-ccgacggttaaattt-aa 435  Q
    |||||| |||| || ||| ||||||||||||||| |||| |||||||||| |||  ||||||||     |  ||||||||| || || ||||| ||| ||    
T  324068 ttatttcattcgatggtcactcaaataatttcaatttttcattttggtccttcattttttccttccgtttctcaaataaattccaactgttaacttttaa 324167  T
Q  436 ctcaaatgatgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgatctttttta 525  Q
    ||| ||  ||||||||||||||||||| |||| ||||||| | |||||| | |||||||    ||||| | ||||||||||| |||||||    
T  324168 ctctaa--atgtctatggtggaccaactttaatagtggtccatcatagaccttattaattgcgttaatcttaaccgtttgatttttttta 324255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 444 - 517
Target Start/End: Complemental strand, 9220441 - 9220365
Alignment:
Q  444 atgtctatggtggaccaaccttaaaa---gtggtctaccatagatcctattaatatttttaatttaaaccgtttgat 517  Q
    ||||||||||||||||||| |||| |   ||||||  ||||| ||| |||||||  |||||||||||||||||||||    
T  9220441 atgtctatggtggaccaacattaagaagagtggtcccccataaatcttattaattattttaatttaaaccgtttgat 9220365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 444 - 494
Target Start/End: Original strand, 30857934 - 30857984
Alignment:
Q  444 atgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaat 494  Q
    ||||||||| |||||||||||||||||||||||| || ||| | |||||||    
T  30857934 atgtctatgatggaccaaccttaaaagtggtctatcagagaccttattaat 30857984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 384 - 519
Target Start/End: Complemental strand, 39605514 - 39605375
Alignment:
Q  384 ttttggtccatcagattttcct----ttgccaaataaatcc-gacggttaaatttaactcaaatgatgtctatggtggaccaacctt-aaaagtggtcta 477  Q
    ||||||||| ||||||||||||    ||||||||||||||| ||||||||| || ||||  ||  |||| ||||||||||||| ||| ||||||||||||    
T  39605514 ttttggtccctcagattttcctccgtttgccaaataaatcctgacggttaacttcaactttaa--atgtatatggtggaccaatcttaaaaagtggtcta 39605417  T
Q  478 ccatagatcctattaatatttttaatttaaaccgtttgatct 519  Q
       |||| | ||||||| || ||||||| | ||||| |||||    
T  39605416 tggtagaccttattaattttcttaattttatccgttcgatct 39605375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 340 - 392
Target Start/End: Original strand, 22047730 - 22047782
Alignment:
Q  340 ggcttatttgattcaatagtctctcaaataatttcaagtttttattttggtcc 392  Q
    |||||||||||| |||| ||| || || |||||||||||||| ||||||||||    
T  22047730 ggcttatttgatccaatggtcccttaattaatttcaagttttcattttggtcc 22047782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 107; Significance: 3e-53; HSPs: 66)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 405 - 566
Target Start/End: Complemental strand, 15450095 - 15449933
Alignment:
Q  405 tttgccaaataaatccgacggttaaatttaactc-aaatgatgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaat 503  Q
    |||||||||||||||  |||||||| |||||||| ||||| ||||||| ||||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  15450095 tttgccaaataaatcttacggttaagtttaactccaaatgttgtctatcgtggaccaaccttaagagtggtccaccatagatcctattaatatttttaat 15449996  T
Q  504 ttaaaccgtttgatcttttttattaaaagataaacgttagatcatgcatgtctactgtatctt 566  Q
    |||||| ||||| |||||||||||||||||| | |||||||||||||||||||| ||||||||    
T  15449995 ttaaactgtttgctcttttttattaaaagatgatcgttagatcatgcatgtctagtgtatctt 15449933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 405 - 612
Target Start/End: Original strand, 52239973 - 52240185
Alignment:
Q  405 tttgccaaataaat-ccgacggttaaatttaactcaaatgatgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaat 503  Q
    |||||||||||||| || | |||||| |||||| |||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  52239973 tttgccaaataaattccaagggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaat 52240072  T
Q  504 ttaaaccgtttga-tcttttttattaaaagataaacgttagatcatgcatgtctactgtatctttca-cgagtcaac-acacttaa-gttttttcccatc 599  Q
    ||||||||||||| | |||||||||||||||||  ||||| ||||||||||||||| ||||||| ||  ||| |||| | ||||||  |||||||||||     
T  52240073 ttaaaccgtttgatttttttttattaaaagatagccgttatatcatgcatgtctaccgtatcttccagtgagccaacaatacttaactttttttcccatt 52240172  T
Q  600 tcatcatcttcat 612  Q
    |||||||||||||    
T  52240173 tcatcatcttcat 52240185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 453 - 592
Target Start/End: Original strand, 7053321 - 7053462
Alignment:
Q  453 gtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgatcttttttattaaaagataaacgttagatcatgcat 552  Q
    ||||||||| ||||| |||| || |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||  | |||||||||||||||    
T  7053321 gtggaccaatcttaagagtgatccaccatagatcctattaatttttttaatttaaatcgtttgatcttttttattaaaagaggatcgttagatcatgcat 7053420  T
Q  553 gtctactgtatctttca-cgagtcaac-acacttaagttttt 592  Q
    |||||||||||||||||  |||||||| |||||||| |||||    
T  7053421 gtctactgtatctttcagtgagtcaacaacacttaatttttt 7053462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 436 - 530
Target Start/End: Complemental strand, 27850926 - 27850831
Alignment:
Q  436 ctcaaatgatgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttga-tcttttttattaaa 530  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||  |||||||||||||||||||| |||||||| |||||    
T  27850926 ctcaaatgatgtctatggtggaccaaccttaaaagtggtccaccatagatcctattaattattttaatttaaaccgtttgattctttttttttaaa 27850831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 405 - 525
Target Start/End: Complemental strand, 2312502 - 2312380
Alignment:
Q  405 tttgccaaataaatcc-gacggttaaatttaactc-aaatgatgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaa 502  Q
    |||||||||||||||  ||| ||||| |||||| | ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||  ||||||    
T  2312502 tttgccaaataaatcatgaccgttaagtttaaccccaaatgatgtctatggtggaccaatcttaaaagtggtccaccatagatcctattaattattttaa 2312403  T
Q  503 tttaaaccgtttgatctttttta 525  Q
    ||||||| ||||||| |||||||    
T  2312402 tttaaactgtttgatttttttta 2312380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 448 - 566
Target Start/End: Complemental strand, 49896561 - 49896443
Alignment:
Q  448 ctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgatcttttttattaaaagataaacgttagatca 547  Q
    ||||||||||||||||| || ||||||| ||  |||||||| |||||  ||||||||||||||||||||| ||||||||||||||| || | ||||||||    
T  49896561 ctatggtggaccaacctaaagagtggtccactgtagatcctgttaattattttaatttaaaccgtttgatattttttattaaaagagaaccattagatca 49896462  T
Q  548 tgcatgtctactgtatctt 566  Q
    |||||||||| ||||||||    
T  49896461 tgcatgtctattgtatctt 49896443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 444 - 566
Target Start/End: Original strand, 44498596 - 44498718
Alignment:
Q  444 atgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgatcttttttattaaaagataaacgttag 543  Q
    |||||||||||||| ||||||||| ||||||| ||||||||||||||||||  |||||||| |||||||||||| |||||| ||||||||| | | ||||    
T  44498596 atgtctatggtggatcaaccttaagagtggtccaccatagatcctattaattattttaattaaaaccgtttgattttttttcttaaaagatgaccattag 44498695  T
Q  544 atcatgcatgtctactgtatctt 566  Q
    || | ||||||||| | ||||||    
T  44498696 attacgcatgtctattttatctt 44498718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 405 - 522
Target Start/End: Original strand, 7707684 - 7707803
Alignment:
Q  405 tttgccaaataaatcc-gacggttaaatttaactc-aaatgatgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaa 502  Q
    |||||||||||||||| ||||||||  |||||| | ||||||||||| |||| |||||||||||| ||||||| ||||||||||||||||||  ||||||    
T  7707684 tttgccaaataaatcctgacggttagctttaacaccaaatgatgtctttggtagaccaaccttaagagtggtccaccatagatcctattaattattttaa 7707783  T
Q  503 tttaaaccgtttgatctttt 522  Q
    ||| ||||||||||| ||||    
T  7707784 tttcaaccgtttgatttttt 7707803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 444 - 524
Target Start/End: Original strand, 56085482 - 56085562
Alignment:
Q  444 atgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgatctttttt 524  Q
    ||||||||||||||| |||||||| ||||||| ||||||||||||||||||  ||||||||||||||||||||| ||||||    
T  56085482 atgtctatggtggactaaccttaagagtggtccaccatagatcctattaattattttaatttaaaccgtttgatttttttt 56085562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 405 - 518
Target Start/End: Original strand, 1794507 - 1794622
Alignment:
Q  405 tttgccaaataaatccga-cggttaaatttaa-ctcaaatgatgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaa 502  Q
    |||| ||||||||||| | ||||||| ||||| | |||||||||| ||||||||||||||||||| ||||||| |||||||| | ||||||  |||||||    
T  1794507 tttgtcaaataaatcctaacggttaagtttaatcccaaatgatgtatatggtggaccaaccttaagagtggtccaccatagaccttattaaattttttaa 1794606  T
Q  503 tttaaaccgtttgatc 518  Q
    ||||||||||||||||    
T  1794607 tttaaaccgtttgatc 1794622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 449 - 558
Target Start/End: Complemental strand, 28590880 - 28590771
Alignment:
Q  449 tatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgatcttttttattaaaagataaacgttagatcat 548  Q
    ||||||| |||||| |||| |||| |  | ||||||||||||||||  ||||||| ||||| |||||||||||||||||||||||  | |||||||||||    
T  28590880 tatggtgaaccaactttaagagtgattcatcatagatcctattaattattttaatataaactgtttgatcttttttattaaaagagtaccgttagatcat 28590781  T
Q  549 gcatgtctac 558  Q
    ||||||||||    
T  28590780 gcatgtctac 28590771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 444 - 524
Target Start/End: Complemental strand, 19750275 - 19750195
Alignment:
Q  444 atgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgatctttttt 524  Q
    ||||||||||||||| || ||||||||| ||| ||||||||||||||||||  |||||||||||| |||||||||||||||    
T  19750275 atgtctatggtggacaaatcttaaaagttgtccaccatagatcctattaattattttaatttaaatcgtttgatctttttt 19750195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 444 - 524
Target Start/End: Original strand, 19789531 - 19789611
Alignment:
Q  444 atgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgatctttttt 524  Q
    ||||||||||||||| || ||||||||| ||| ||||||||||||||||||  |||||||||||| |||||||||||||||    
T  19789531 atgtctatggtggacaaatcttaaaagttgtccaccatagatcctattaattattttaatttaaatcgtttgatctttttt 19789611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 444 - 524
Target Start/End: Original strand, 6348289 - 6348369
Alignment:
Q  444 atgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgatctttttt 524  Q
    |||||||||||||||||||||||| ||||||| ||| |||| | ||||||||||| |||||| |||| |||||||||||||    
T  6348289 atgtctatggtggaccaaccttaagagtggtccaccgtagaccttattaatatttctaattttaaccctttgatctttttt 6348369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 444 - 524
Target Start/End: Complemental strand, 26496290 - 26496210
Alignment:
Q  444 atgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgatctttttt 524  Q
    |||||||||||||||| || |||||| ||||| ||||||||||||||||||  || |||||||||||||||||| ||||||    
T  26496290 atgtctatggtggaccgactttaaaaatggtccaccatagatcctattaattattctaatttaaaccgtttgatatttttt 26496210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 444 - 524
Target Start/End: Original strand, 40723362 - 40723442
Alignment:
Q  444 atgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgatctttttt 524  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||||||||  ||| ||| | || |||||||||||||||    
T  40723362 atgtatatggtggaccaaccttaagagtggtctaccatagatcctattaattatttaaatgttaatcgtttgatctttttt 40723442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 431 - 510
Target Start/End: Original strand, 11968634 - 11968713
Alignment:
Q  431 tttaactcaaatgatgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaacc 510  Q
    ||||||||| || ||||||||| |||||||||||||| ||||||| | ||||||||||||||||  ||||||||||||||    
T  11968634 tttaactcagattatgtctatgatggaccaaccttaagagtggtccatcatagatcctattaattattttaatttaaacc 11968713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 340 - 391
Target Start/End: Complemental strand, 44503796 - 44503745
Alignment:
Q  340 ggcttatttgattcaatagtctctcaaataatttcaagtttttattttggtc 391  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  44503796 ggcttatttgattcaatagtccctcaaataatttcaagtttttattttggtc 44503745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 447 - 533
Target Start/End: Original strand, 13165633 - 13165718
Alignment:
Q  447 tctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgatcttttttattaaaaga 533  Q
    ||||||||||||||||||||| ||||||| ||||||||    ||||||  |||||||||||||||||||||||||||| ||||||||    
T  13165633 tctatggtggaccaaccttaagagtggtccaccatagacttcattaattattttaatttaaaccgtttgatctttttt-ttaaaaga 13165718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 496 - 566
Target Start/End: Complemental strand, 42872258 - 42872188
Alignment:
Q  496 tttttaatttaaaccgtttgatcttttttattaaaagataaacgttagatcatgcatgtctactgtatctt 566  Q
    ||||| ||||||||||||||||||||||||||||||||  | |||||||| |||||| |||||||||||||    
T  42872258 ttttttatttaaaccgtttgatcttttttattaaaagaggatcgttagattatgcatatctactgtatctt 42872188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 447 - 532
Target Start/End: Complemental strand, 52138771 - 52138686
Alignment:
Q  447 tctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgatcttttttattaaaag 532  Q
    |||||||| ||||||| |||| | ||||| ||||||||||||||||||  || |||||||||||||||||| |||||| |||||||    
T  52138771 tctatggtagaccaactttaagaatggtccaccatagatcctattaattattctaatttaaaccgtttgatttttttttttaaaag 52138686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 340 - 392
Target Start/End: Original strand, 1188841 - 1188893
Alignment:
Q  340 ggcttatttgattcaatagtctctcaaataatttcaagtttttattttggtcc 392  Q
    |||||||||||| |||||||| |||||||||||||||||||||||||||||||    
T  1188841 ggcttatttgatccaatagtccctcaaataatttcaagtttttattttggtcc 1188893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 444 - 519
Target Start/End: Original strand, 4871629 - 4871704
Alignment:
Q  444 atgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgatct 519  Q
    ||||||||||||||||||||| || ||||||| ||| ||||||||||||||  |||||||||||||| ||| ||||    
T  4871629 atgtctatggtggaccaacctaaagagtggtccaccgtagatcctattaattattttaatttaaaccttttaatct 4871704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 444 - 511
Target Start/End: Original strand, 22069370 - 22069437
Alignment:
Q  444 atgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccg 511  Q
    ||||||||||||||| |||||||||||||||  ||||||||  |||||||||||||||||||| ||||    
T  22069370 atgtctatggtggacgaaccttaaaagtggttcaccatagactctattaatatttttaatttataccg 22069437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 471 - 566
Target Start/End: Complemental strand, 22161708 - 22161613
Alignment:
Q  471 tggtctaccatagatcctattaatatttttaatttaaaccgtttgatcttttttattaaaagataaacgttagatcatgcatgtctactgtatctt 566  Q
    ||||| || ||||||||||||| | |||||||| ||||||||||||||||||||| ||||  |  |  ||||||||||||||||| ||||||||||    
T  22161708 tggtccactatagatcctattattttttttaatataaaccgtttgatcttttttaataaagaaagattgttagatcatgcatgtccactgtatctt 22161613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 471 - 566
Target Start/End: Complemental strand, 23317255 - 23317160
Alignment:
Q  471 tggtctaccatagatcctattaatatttttaatttaaaccgtttgatcttttttattaaaagataaacgttagatcatgcatgtctactgtatctt 566  Q
    ||||| || ||||||||||||| | |||||||| ||||||||||||||||||||| ||||  |  |  ||||||||||||||||| ||||||||||    
T  23317255 tggtccactatagatcctattattttttttaatataaaccgtttgatcttttttaataaagaaggattgttagatcatgcatgtccactgtatctt 23317160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 471 - 566
Target Start/End: Complemental strand, 25922331 - 25922236
Alignment:
Q  471 tggtctaccatagatcctattaatatttttaatttaaaccgtttgatcttttttattaaaagataaacgttagatcatgcatgtctactgtatctt 566  Q
    ||||| || ||||||||||||| | |||||||| ||||||||||||||||||||| ||||  |  |  ||||||||||||||||| ||||||||||    
T  25922331 tggtccactatagatcctattattttttttaatataaaccgtttgatcttttttaataaagaaggattgttagatcatgcatgtccactgtatctt 25922236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 444 - 532
Target Start/End: Complemental strand, 38555260 - 38555172
Alignment:
Q  444 atgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgatcttttttattaaaag 532  Q
    ||||||| |||| |||||| ||  | |||||||||||||||   ||||||  |||||||||||||||||||||||||||||||| ||||    
T  38555260 atgtctaaggtgaaccaactttgtaggtggtctaccatagactttattaaattttttaatttaaaccgtttgatcttttttatttaaag 38555172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 444 - 519
Target Start/End: Original strand, 2311088 - 2311163
Alignment:
Q  444 atgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgatct 519  Q
    |||||||||||||||||| ||||||||||||||| | |||| | |||||||||| ||||||| |||| || |||||    
T  2311088 atgtctatggtggaccaatcttaaaagtggtctatcgtagaccttattaatattgttaattttaaccattcgatct 2311163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 444 - 523
Target Start/End: Original strand, 4714155 - 4714234
Alignment:
Q  444 atgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgatcttttt 523  Q
    |||||||||||||| ||||||||| ||||||| ||||||||    ||||||||||| ||||| |||| ||||||||||||    
T  4714155 atgtctatggtggatcaaccttaagagtggtccaccatagacttcattaatattttaaattttaaccatttgatcttttt 4714234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 438 - 524
Target Start/End: Complemental strand, 6349538 - 6349449
Alignment:
Q  438 caaatgatgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatat---ttttaatttaaaccgtttgatctttttt 524  Q
    |||||||||| ||||||||| ||||||||| ||||||| |||||||| | |||  ||||   ||||||||||||| ||||||||||||||    
T  6349538 caaatgatgtatatggtggatcaaccttaagagtggtccaccatagaccatatatatatatattttaatttaaactgtttgatctttttt 6349449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 471 - 521
Target Start/End: Complemental strand, 23103962 - 23103913
Alignment:
Q  471 tggtctaccatagatcctattaatatttttaatttaaaccgtttgatcttt 521  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||||    
T  23103962 tggtccaccatagatcctattaat-tttttaatttaaaccgtttgatcttt 23103913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 410 - 523
Target Start/End: Complemental strand, 53435768 - 53435655
Alignment:
Q  410 caaataaatcc--gacggttaaatttaactcaaatgatgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaa 507  Q
    |||||||||||  ||||||||| |||||||  ||  ||||||||||| |||||||||||| ||||||| ||| ||||    |||||| |||| ||||| |    
T  53435768 caaataaatccttgacggttaagtttaactttaa--atgtctatggtagaccaaccttaagagtggtccaccgtagacttcattaattttttaaatttta 53435671  T
Q  508 accgtttgatcttttt 523  Q
    ||||||||||||||||    
T  53435670 accgtttgatcttttt 53435655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 461 - 517
Target Start/End: Original strand, 1519962 - 1520018
Alignment:
Q  461 accttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgat 517  Q
    ||||| |||||| || ||||||||||||||||||  |||||||||||||||||||||    
T  1519962 acctttaaagtgatccaccatagatcctattaattattttaatttaaaccgtttgat 1520018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 340 - 388
Target Start/End: Original strand, 1794409 - 1794457
Alignment:
Q  340 ggcttatttgattcaatagtctctcaaataatttcaagtttttattttg 388  Q
    ||||||||||||||||| ||| |||||||||||||||||||| ||||||    
T  1794409 ggcttatttgattcaatggtccctcaaataatttcaagttttcattttg 1794457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 344 - 392
Target Start/End: Complemental strand, 6349667 - 6349619
Alignment:
Q  344 tatttgattcaatagtctctcaaataatttcaagtttttattttggtcc 392  Q
    ||||||||||||| ||| |||||||||||||||||||| ||||||||||    
T  6349667 tatttgattcaatggtccctcaaataatttcaagttttcattttggtcc 6349619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 444 - 524
Target Start/End: Original strand, 26629926 - 26630005
Alignment:
Q  444 atgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgatctttttt 524  Q
    |||| ||||||| |||||| |||| ||||||| ||||||| ||||||||||  ||||||| ||||| ||||||||||||||    
T  26629926 atgtttatggtgaaccaac-ttaagagtggtccaccataggtcctattaattattttaatgtaaactgtttgatctttttt 26630005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 405 - 524
Target Start/End: Complemental strand, 13166789 - 13166670
Alignment:
Q  405 tttgccaaataaatcc--gacggttaaatttaactcaaatgatgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaa 502  Q
    ||||||||||||||||  ||| ||||| |||||||  ||  ||||||||| |||||||||| ||| |||| || ||||||||    ||||||||||| ||    
T  13166789 tttgccaaataaatccttgactgttaagtttaacttcaa--atgtctatgatggaccaaccgtaagagtgatccaccatagaattcattaatattttaaa 13166692  T
Q  503 tttaaaccgtttgatctttttt 524  Q
    ||| ||||||||||| ||||||    
T  13166691 ttttaaccgtttgatatttttt 13166670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 340 - 391
Target Start/End: Original strand, 24426337 - 24426388
Alignment:
Q  340 ggcttatttgattcaatagtctctcaaataatttcaagtttttattttggtc 391  Q
    |||||||||||| |||| ||| |||||||||||||||||||| |||||||||    
T  24426337 ggcttatttgatccaatggtccctcaaataatttcaagttttcattttggtc 24426388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 444 - 519
Target Start/End: Original strand, 33231525 - 33231599
Alignment:
Q  444 atgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgatct 519  Q
    ||||||||||||||| ||||||| |||||||| |||||| |  |||||||| |||||||||| |||| ||||||||    
T  33231525 atgtctatggtggacaaaccttagaagtggtccaccataaactctattaat-tttttaatttcaaccatttgatct 33231599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 471 - 522
Target Start/End: Original strand, 45535207 - 45535257
Alignment:
Q  471 tggtctaccatagatcctattaatatttttaatttaaaccgtttgatctttt 522  Q
    ||||| |||||||||||||||||| |||||||||||||| ||||||||||||    
T  45535207 tggtccaccatagatcctattaat-tttttaatttaaactgtttgatctttt 45535257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 453 - 532
Target Start/End: Complemental strand, 56157468 - 56157389
Alignment:
Q  453 gtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgatcttttttattaaaag 532  Q
    ||||||||| ||||| |||| || |||||||||||||||||| ||||||| || |||  ||||||||||| | |||||||    
T  56157468 gtggaccaatcttaagagtgttccaccatagatcctattaatttttttaactttaactatttgatcttttattttaaaag 56157389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 443 - 513
Target Start/End: Complemental strand, 42810185 - 42810115
Alignment:
Q  443 gatgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtt 513  Q
    ||||||||||||| ||||| ||||| ||| ||| |||||||| | ||||||  ||||||||||||||||||    
T  42810185 gatgtctatggtgaaccaatcttaagagtagtccaccatagaccttattaaattttttaatttaaaccgtt 42810115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 410 - 524
Target Start/End: Original strand, 53432163 - 53432277
Alignment:
Q  410 caaataaatcc--gacggttaaatttaactcaaatgatgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaa 507  Q
    |||||||||||  ||||||||| |||||| | ||  |||||||||||| |||||| |||| |||||   |||||| | | ||||||| |||| ||||| |    
T  53432163 caaataaatccctgacggttaagtttaaccccaa--atgtctatggtgaaccaactttaagagtggctcaccatacaccttattaattttttcaatttta 53432260  T
Q  508 accgtttgatctttttt 524  Q
    |||||||||||||||||    
T  53432261 accgtttgatctttttt 53432277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 405 - 504
Target Start/End: Complemental strand, 7708808 - 7708710
Alignment:
Q  405 tttgccaaataaatccgacg-gttaaatttaactcaaatgatgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaat 503  Q
    |||||||||||||||| | | ||||| |||||||| ||  || ||||||||||||||||||||||||||||  | |||||| | ||||||| || |||||    
T  7708808 tttgccaaataaatcccaagtgttaactttaactctaa--atatctatggtggaccaaccttaaaagtggtacatcatagaccttattaattttgttaat 7708711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 343 - 392
Target Start/End: Complemental strand, 27851047 - 27850998
Alignment:
Q  343 ttatttgattcaatagtctctcaaataatttcaagtttttattttggtcc 392  Q
    ||||||||| |||| ||| |||||||||||||||||||| ||||||||||    
T  27851047 ttatttgatccaatggtccctcaaataatttcaagttttcattttggtcc 27850998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 450 - 515
Target Start/End: Original strand, 34326868 - 34326933
Alignment:
Q  450 atggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttg 515  Q
    ||||||||||||| |||| |||||||||| |||||||||||||||  ||| ||||| || ||||||    
T  34326868 atggtggaccaactttaagagtggtctactatagatcctattaattatttaaattttaatcgtttg 34326933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 405 - 484
Target Start/End: Original strand, 52963665 - 52963743
Alignment:
Q  405 tttgccaaataaatc-cgacggttaaatttaactcaaatgatgtctatggtggaccaaccttaaaagtggtctaccataga 484  Q
    |||| |||||||||| |||| ||||| |||||||| ||  ||||||||||||||||| |||||||||||||| | ||||||    
T  52963665 tttgtcaaataaatctcgactgttaactttaactccaa--atgtctatggtggaccagccttaaaagtggtccatcataga 52963743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 340 - 392
Target Start/End: Original strand, 4128991 - 4129043
Alignment:
Q  340 ggcttatttgattcaatagtctctcaaataatttcaagtttttattttggtcc 392  Q
    |||||||||||| |||| ||  |||||||||||||||||||| ||||||||||    
T  4128991 ggcttatttgatccaatggttcctcaaataatttcaagttttcattttggtcc 4129043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 340 - 392
Target Start/End: Original strand, 6348153 - 6348205
Alignment:
Q  340 ggcttatttgattcaatagtctctcaaataatttcaagtttttattttggtcc 392  Q
    ||||||||||||  ||| ||| |||||||||||||||||||| ||||||||||    
T  6348153 ggcttatttgatcaaatggtccctcaaataatttcaagttttcattttggtcc 6348205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 410 - 524
Target Start/End: Complemental strand, 13533275 - 13533163
Alignment:
Q  410 caaataaatcc-gacggttaaatttaactcaaatgatgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaa 508  Q
    ||||||||||| ||| |||||||||||||  ||  ||||||||||||||||||| ||| |  | ||| |||||||| | ||||||| |||| ||||| ||    
T  13533275 caaataaatccagactgttaaatttaacttcaa--atgtctatggtggaccaacattatagatagtccaccatagaccttattaat-ttttcaattttaa 13533179  T
Q  509 ccgtttgatctttttt 524  Q
    || |||||||||||||    
T  13533178 ccatttgatctttttt 13533163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 340 - 392
Target Start/End: Original strand, 37882832 - 37882884
Alignment:
Q  340 ggcttatttgattcaatagtctctcaaataatttcaagtttttattttggtcc 392  Q
    ||||||||||||| ||| ||| |||||||||||||||||||| ||||| ||||    
T  37882832 ggcttatttgatttaatggtccctcaaataatttcaagttttcattttagtcc 37882884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 468 - 524
Target Start/End: Complemental strand, 53401442 - 53401387
Alignment:
Q  468 aagtggtctaccatagatcctattaatatttttaatttaaaccgtttgatctttttt 524  Q
    ||||||||||||||||| ||||||||  |||||||||| ||| ||||||||||||||    
T  53401442 aagtggtctaccataga-cctattaaattttttaattttaactgtttgatctttttt 53401387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 392
Target Start/End: Original strand, 1829752 - 1829803
Alignment:
Q  341 gcttatttgattcaatagtctctcaaataatttcaagtttttattttggtcc 392  Q
    ||||||||||| |||  ||| |||||||||||||||||||| ||||||||||    
T  1829752 gcttatttgatccaacggtccctcaaataatttcaagttttcattttggtcc 1829803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 453 - 532
Target Start/End: Original strand, 36243663 - 36243742
Alignment:
Q  453 gtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgatcttttttattaaaag 532  Q
    ||||||||| ||||| |||| || ||||||||| ||||| |  ||||||| || |||||||||||||||| | |||||||    
T  36243663 gtggaccaatcttaagagtgttccaccatagattctattgaattttttaactttaaccgtttgatcttttattttaaaag 36243742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 444 - 519
Target Start/End: Original strand, 40792883 - 40792958
Alignment:
Q  444 atgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgatct 519  Q
    |||||||| |||||||||||||||||||||||||   |||| | ||||||| || ||||||| | ||||| |||||    
T  40792883 atgtctatagtggaccaaccttaaaagtggtctatggtagaccttattaattttcttaattttatccgttcgatct 40792958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 474 - 525
Target Start/End: Complemental strand, 48207673 - 48207622
Alignment:
Q  474 tctaccatagatcctattaatatttttaatttaaaccgtttgatctttttta 525  Q
    ||||||||||||  ||||||  |||||||||| |||||||||||||||||||    
T  48207673 tctaccatagattttattaaattttttaattttaaccgtttgatctttttta 48207622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 362 - 392
Target Start/End: Original strand, 27847698 - 27847728
Alignment:
Q  362 ctcaaataatttcaagtttttattttggtcc 392  Q
    |||||||||||||||||||||||||||||||    
T  27847698 ctcaaataatttcaagtttttattttggtcc 27847728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 342 - 392
Target Start/End: Complemental strand, 42810319 - 42810269
Alignment:
Q  342 cttatttgattcaatagtctctcaaataatttcaagtttttattttggtcc 392  Q
    |||||||||| |||||||| || |||||||||||| |||| ||||||||||    
T  42810319 cttatttgatccaatagtcccttaaataatttcaacttttcattttggtcc 42810269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 444 - 566
Target Start/End: Original strand, 56296325 - 56296447
Alignment:
Q  444 atgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgatcttttttattaaaagataaacgttag 543  Q
    ||||||| ||||||||||| | | | ||||||||||||||| | || |||  |||||||||| |||| |||||| ||||  || ||||||  | ||||||    
T  56296325 atgtctaaggtggaccaacatcataggtggtctaccatagaccttactaagttttttaattttaaccatttgatattttagataaaaagaggatcgttag 56296424  T
Q  544 atcatgcatgtctactgtatctt 566  Q
    ||  |||||||||| | ||||||    
T  56296425 attgtgcatgtctattctatctt 56296447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 340 - 392
Target Start/End: Original strand, 390215 - 390267
Alignment:
Q  340 ggcttatttgattcaatagtctctcaaataatttcaagtttttattttggtcc 392  Q
    ||||||||||||||| | ||| |  ||||||||||||||||| ||||||||||    
T  390215 ggcttatttgattcattggtcccctaaataatttcaagttttcattttggtcc 390267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 340 - 392
Target Start/End: Complemental strand, 393756 - 393704
Alignment:
Q  340 ggcttatttgattcaatagtctctcaaataatttcaagtttttattttggtcc 392  Q
    |||||||||||| |||  ||| ||||||||||||||| |||| ||||||||||    
T  393756 ggcttatttgatccaacggtccctcaaataatttcaaattttcattttggtcc 393704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 340 - 392
Target Start/End: Complemental strand, 1831381 - 1831329
Alignment:
Q  340 ggcttatttgattcaatagtctctcaaataatttcaagtttttattttggtcc 392  Q
    |||||||||||| |||| ||| ||||| |||||||||||||| ||||| ||||    
T  1831381 ggcttatttgatccaatggtccctcaattaatttcaagttttcattttagtcc 1831329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 340 - 392
Target Start/End: Complemental strand, 37884395 - 37884343
Alignment:
Q  340 ggcttatttgattcaatagtctctcaaataatttcaagtttttattttggtcc 392  Q
    ||||||||||||||||| ||| |||||||||||| || |||| ||||| ||||    
T  37884395 ggcttatttgattcaatggtccctcaaataattttaaattttcatttttgtcc 37884343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 446 - 522
Target Start/End: Original strand, 49342756 - 49342832
Alignment:
Q  446 gtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgatctttt 522  Q
    |||||| ||||||||||||||||||||||| || ||| |    |||||| |||| |||||  |||||||||||||||    
T  49342756 gtctatagtggaccaaccttaaaagtggtccactataaacttcattaattttttaaattttgaccgtttgatctttt 49342832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 340 - 388
Target Start/End: Original strand, 52239875 - 52239923
Alignment:
Q  340 ggcttatttgattcaatagtctctcaaataatttcaagtttttattttg 388  Q
    ||||||||||||  ||| ||| ||||||||||||||| |||||||||||    
T  52239875 ggcttatttgatctaatggtccctcaaataatttcaaatttttattttg 52239923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 72; Significance: 2e-32; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 405 - 523
Target Start/End: Complemental strand, 38242536 - 38242417
Alignment:
Q  405 tttgccaaataaatccg-acggttaaatttaactcaaatgatgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaat 503  Q
    ||||||||||||||||  || ||||| ||||||||||||||||||||||||||||||||||||| ||||||| |||||| || ||||||||  |||||||    
T  38242536 tttgccaaataaatcctcacagttaagtttaactcaaatgatgtctatggtggaccaaccttaagagtggtccaccataaattctattaattattttaat 38242437  T
Q  504 ttaaaccgtttgatcttttt 523  Q
    |||||||||||||| |||||    
T  38242436 ttaaaccgtttgattttttt 38242417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 405 - 566
Target Start/End: Original strand, 26886368 - 26886529
Alignment:
Q  405 tttgccaaataaatccgacggttaaatttaac-tcaaatgatgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaat 503  Q
    ||||||||||||||||||| ||||| || ||| ||||||||||| || |||| ||||||||||| ||||||| |||||| |||||||||||  |||||||    
T  26886368 tttgccaaataaatccgactgttaatttcaacctcaaatgatgtttacggtgaaccaaccttaagagtggtccaccataaatcctattaattattttaat 26886467  T
Q  504 ttaaaccgtttgatcttttttattaaaagataaacgttagatcatgcatgtctactgtatctt 566  Q
    |||||||||||||| |||||| |||||||  || | || ||| ||||||||||| | ||||||    
T  26886468 ttaaaccgtttgat-tttttttttaaaagggaaccattggattatgcatgtctattttatctt 26886529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 425 - 559
Target Start/End: Complemental strand, 12107979 - 12107845
Alignment:
Q  425 gttaaatttaactc-aaatgatgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgatcttttt 523  Q
    |||||||||||| | ||||||| | ||||||||||||||||||||||||||| |||||||| ||||||  | |||||||| |||||||||||||||||||    
T  12107979 gttaaatttaaccccaaatgatatttatggtggaccaaccttaaaagtggtccaccatagaccctatt-ttttttttaatataaaccgtttgatcttttt 12107881  T
Q  524 tattaaaagataaacgttagatcatgcatgtctact 559  Q
    ||||||| ||  | | |||||||||||| |||||||    
T  12107880 tattaaaggaggaccattagatcatgcaggtctact 12107845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 471 - 566
Target Start/End: Complemental strand, 28909561 - 28909466
Alignment:
Q  471 tggtctaccatagatcctattaatatttttaatttaaaccgtttgatcttttttattaaaagataaacgttagatcatgcatgtctactgtatctt 566  Q
    ||||| |||||||||||||||||| |||||||||||||| | |||||||||||||||||||||  |  ||||||||||||||||||||||||||||    
T  28909561 tggtccaccatagatcctattaatttttttaatttaaactggttgatcttttttattaaaagaggacggttagatcatgcatgtctactgtatctt 28909466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 409 - 517
Target Start/End: Complemental strand, 10732145 - 10732036
Alignment:
Q  409 ccaaataaat-ccgacggttaaatttaactcaaatgatgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaa 507  Q
    |||||||||| ||||||||||| |||||| |||||||||||||||||||||||||||| | || |||| ||||||||||||||||||  |||||||||      
T  10732145 ccaaataaattccgacggttaagtttaacccaaatgatgtctatggtggaccaacctttagagcggtccaccatagatcctattaattattttaatttcg 10732046  T
Q  508 accgtttgat 517  Q
    ||||||||||    
T  10732045 accgtttgat 10732036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 421 - 533
Target Start/End: Original strand, 35371020 - 35371132
Alignment:
Q  421 gacggttaaatttaactcaaatgatgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgatctt 520  Q
    ||||||||| |||| | |||||||||| ||||||||||||||||||| ||||||| ||||||||||||||||||  ||||||||| |||  |||||| ||    
T  35371020 gacggttaagtttagcccaaatgatgtttatggtggaccaaccttaagagtggtccaccatagatcctattaattattttaattttaactttttgatttt 35371119  T
Q  521 ttttattaaaaga 533  Q
    |||| | ||||||    
T  35371120 ttttttaaaaaga 35371132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 447 - 530
Target Start/End: Original strand, 10301072 - 10301155
Alignment:
Q  447 tctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgatcttttttattaaa 530  Q
    ||||||||| ||||||||||| |||| || ||||||||||||||||||  ||||||||||||| ||||||| |||||| |||||    
T  10301072 tctatggtgaaccaaccttaagagtgatccaccatagatcctattaattattttaatttaaactgtttgatttttttttttaaa 10301155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 444 - 519
Target Start/End: Original strand, 48083362 - 48083437
Alignment:
Q  444 atgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgatct 519  Q
    |||||||||||| || |||||||| ||||||||||||||||||||||||||  |||||||||||||| || |||||    
T  48083362 atgtctatggtgcactaaccttaagagtggtctaccatagatcctattaattattttaatttaaaccattcgatct 48083437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 400 - 517
Target Start/End: Complemental strand, 27841735 - 27841617
Alignment:
Q  400 tttcctttgccaaataaat-ccgacggttaaatttaactcaaatgatgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatattt 498  Q
    |||| |||| ||||||||| |||| |||||| |||||   |||| |||| ||||||||||||||||||| ||||||| ||||||||||||| ||||  ||    
T  27841735 tttcgtttgtcaaataaattccgatggttaagtttaatctaaattatgtttatggtggaccaaccttaagagtggtccaccatagatcctaataattatt 27841636  T
Q  499 ttaatttaaaccgtttgat 517  Q
    ||||||| ||| |||||||    
T  27841635 ttaattttaactgtttgat 27841617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 438 - 515
Target Start/End: Complemental strand, 34819271 - 34819194
Alignment:
Q  438 caaatgatgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttg 515  Q
    |||||||||||||| ||||| ||||||||| ||||||| |||||||||||||||| |  ||||||||||||| |||||    
T  34819271 caaatgatgtctatagtggatcaaccttaagagtggtccaccatagatcctattacttattttaatttaaactgtttg 34819194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 449 - 517
Target Start/End: Original strand, 3208625 - 3208693
Alignment:
Q  449 tatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgat 517  Q
    ||||||||||||||||||| ||||||| |||||| |||||||||||  || ||||||||||||||||||    
T  3208625 tatggtggaccaaccttaagagtggtccaccataaatcctattaattattataatttaaaccgtttgat 3208693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 451 - 519
Target Start/End: Complemental strand, 14745174 - 14745106
Alignment:
Q  451 tggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgatct 519  Q
    ||||||||||||||||| ||||||  ||||||||||||||||||  ||||||||||||| |||||||||    
T  14745174 tggtggaccaaccttaagagtggttcaccatagatcctattaattattttaatttaaactgtttgatct 14745106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 444 - 524
Target Start/End: Original strand, 49379837 - 49379917
Alignment:
Q  444 atgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgatctttttt 524  Q
    |||||||||||||||| || |||||| ||||| ||||||||||||||||||  || |||||||||| ||||||| ||||||    
T  49379837 atgtctatggtggaccgactttaaaaatggtccaccatagatcctattaattattctaatttaaactgtttgatatttttt 49379917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 471 - 566
Target Start/End: Original strand, 33705349 - 33705444
Alignment:
Q  471 tggtctaccatagatcctattaatatttttaatttaaaccgtttgatcttttttattaaaagataaacgttagatcatgcatgtctactgtatctt 566  Q
    ||||| || ||||||||||||| |||||||||| ||||||||||||||||||||| ||||  |  |   |||||||||||||||| ||||||||||    
T  33705349 tggtccactatagatcctattattatttttaatataaaccgtttgatcttttttaataaagaaagattattagatcatgcatgtccactgtatctt 33705444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 471 - 566
Target Start/End: Original strand, 44175728 - 44175823
Alignment:
Q  471 tggtctaccatagatcctattaatatttttaatttaaaccgtttgatcttttttattaaaagataaacgttagatcatgcatgtctactgtatctt 566  Q
    ||||| || ||||||||||||| | |||||||| ||||||||||||||||||||| ||||  |  |  ||||||||||||||||| ||||||||||    
T  44175728 tggtccactatagatcctattattttttttaatataaaccgtttgatcttttttaataaagaaggattgttagatcatgcatgtccactgtatctt 44175823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 471 - 522
Target Start/End: Complemental strand, 44602997 - 44602947
Alignment:
Q  471 tggtctaccatagatcctattaatatttttaatttaaaccgtttgatctttt 522  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  44602997 tggtctaccatagatcctattaat-tttttaatttaaaccgtttgatctttt 44602947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 444 - 519
Target Start/End: Original strand, 53420452 - 53420527
Alignment:
Q  444 atgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgatct 519  Q
    ||||||||||||||||||| ||||||||| || |||||||| | ||||||  |||||||||||||| |||||||||    
T  53420452 atgtctatggtggaccaactttaaaagtgatccaccatagaccttattaaactttttaatttaaactgtttgatct 53420527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 444 - 534
Target Start/End: Original strand, 42685011 - 42685101
Alignment:
Q  444 atgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgatcttttttattaaaagat 534  Q
    |||||||||||| ||||| ||||| ||||||| |||||| | | ||||||  |||||||||||||||||||||||| |||| | |||||||    
T  42685011 atgtctatggtgaaccaagcttaagagtggtccaccataaaccttattaaattttttaatttaaaccgtttgatctgttttttaaaaagat 42685101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 443 - 524
Target Start/End: Original strand, 10338872 - 10338953
Alignment:
Q  443 gatgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgatctttttt 524  Q
    |||||||||  || ||||||||||| ||||||| ||||||||||||||||||  ||||||||| ||| ||||||| ||||||    
T  10338872 gatgtctataatgaaccaaccttaagagtggtccaccatagatcctattaattattttaattttaactgtttgatttttttt 10338953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 447 - 524
Target Start/End: Complemental strand, 53194590 - 53194513
Alignment:
Q  447 tctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgatctttttt 524  Q
    |||||||| ||| || |||||||||| || ||||||||| ||||||||  ||||| ||||||||||||||||||||||    
T  53194590 tctatggtagacaaatcttaaaagtgatccaccatagattctattaattattttattttaaaccgtttgatctttttt 53194513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 405 - 513
Target Start/End: Complemental strand, 53614293 - 53614184
Alignment:
Q  405 tttgccaaataaatccgacggttaaatttaactc-aaatgatgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaat 503  Q
    ||||||||||||||||    ||||| |||||| | |||| |||||||||||||| || |||||| ||||||| ||||||||||||| ||||  |||||||    
T  53614293 tttgccaaataaatccaggcgttaagtttaaccccaaataatgtctatggtggatcatccttaagagtggtccaccatagatcctagtaattattttaat 53614194  T
Q  504 ttaaaccgtt 513  Q
    || |||||||    
T  53614193 ttcaaccgtt 53614184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 444 - 532
Target Start/End: Original strand, 7270458 - 7270546
Alignment:
Q  444 atgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgatcttttttattaaaag 532  Q
    |||||| | ||||||||||||||| |||||||||||||||||| ||||||  ||||| | || ||| |||||||||||| | |||||||    
T  7270458 atgtctgtagtggaccaaccttaagagtggtctaccatagatcttattaacttttttgactttaactgtttgatcttttgttttaaaag 7270546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 340 - 392
Target Start/End: Complemental strand, 12108101 - 12108049
Alignment:
Q  340 ggcttatttgattcaatagtctctcaaataatttcaagtttttattttggtcc 392  Q
    ||||||||||||||||||||| || ||||||||||||||||| ||||||||||    
T  12108101 ggcttatttgattcaatagtcccttaaataatttcaagttttcattttggtcc 12108049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 444 - 524
Target Start/End: Original strand, 13621055 - 13621135
Alignment:
Q  444 atgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgatctttttt 524  Q
    |||||||||||||||| || | |||| ||||| ||||||||||||||||||  || ||||||||||||||| || ||||||    
T  13621055 atgtctatggtggaccgacttaaaaaatggtccaccatagatcctattaattattctaatttaaaccgtttaatttttttt 13621135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 499 - 610
Target Start/End: Complemental strand, 36176462 - 36176351
Alignment:
Q  499 ttaatttaaaccgtttgatcttttttattaaaagataaacgttagatcatgcatgtctactgtatctttcacgagtcaac-acacttaagttttttccca 597  Q
    |||||||  ||| ||||||||||||||||||| ||| | |||||||| ||||||| |||| ||||||| || |||||||| |||||||| |||||||| |    
T  36176462 ttaattttgaccatttgatcttttttattaaaggatgatcgttagattatgcatgcctaccgtatcttccatgagtcaacaacacttaa-ttttttccta 36176364  T
Q  598 tctcatcatcttc 610  Q
    | || ||||||||    
T  36176363 tttcttcatcttc 36176351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 405 - 524
Target Start/End: Complemental strand, 41264673 - 41264553
Alignment:
Q  405 tttgccaaataaatc-cgacggttaaatttaactcaaatgatgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaat 503  Q
    ||||||||||||||| | || ||||| |||||   ||||||||| ||||||||| || | |||| ||||||  ||||||||||||||||||  |||||||    
T  41264673 tttgccaaataaatctcaaccgttaagtttaataaaaatgatgtttatggtggatcatctttaagagtggtacaccatagatcctattaattattttaat 41264574  T
Q  504 ttaaaccgtttgatctttttt 524  Q
    ||  |||||||||| ||||||    
T  41264573 ttcgaccgtttgatttttttt 41264553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 405 - 522
Target Start/End: Original strand, 10730981 - 10731097
Alignment:
Q  405 tttgccaaataaatcc-gacggttaaatttaactcaaatgatgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaat 503  Q
    |||||||||||||||| ||| ||||| |||||||  ||  |||||||||||| ||||||||||||||||||||| |||| | | ||||||| || |||||    
T  10730981 tttgccaaataaatcccgactgttaactttaacttcaa--atgtctatggtgaaccaaccttaaaagtggtctatcatataccttattaattttgttaat 10731078  T
Q  504 ttaaaccgtttgatctttt 522  Q
    || || | || ||||||||    
T  10731079 tttaatcattcgatctttt 10731097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 405 - 477
Target Start/End: Original strand, 53622758 - 53622832
Alignment:
Q  405 tttgccaaataaatccga-cggttaaatttaactc-aaatgatgtctatggtggaccaaccttaaaagtggtcta 477  Q
    |||||||| ||||||| | ||||||| |||||| | ||||||||||||||||||||||||||||| |||||||||    
T  53622758 tttgccaactaaatcccaacggttaagtttaaccccaaatgatgtctatggtggaccaaccttaagagtggtcta 53622832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 449 - 521
Target Start/End: Complemental strand, 3455600 - 3455529
Alignment:
Q  449 tatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgatcttt 521  Q
    ||||||||||||||||||| ||||||| |||||||||| ||||||| | |||||| | |||| ||||||||||    
T  3455600 tatggtggaccaaccttaagagtggtccaccatagatcatattaat-tatttaatctcaaccctttgatcttt 3455529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 471 - 566
Target Start/End: Complemental strand, 3807945 - 3807851
Alignment:
Q  471 tggtctaccatagatcctattaatatttttaatttaaaccgtttgatcttttttattaaaagataaacgttagatcatgcatgtctactgtatctt 566  Q
    ||||| || ||||||||||||| | |||||||| ||||||||||||||||||||| ||||  |  |  ||||||||||||||||| | ||||||||    
T  3807945 tggtccactatagatcctattatt-tttttaatataaaccgtttgatcttttttaataaagaaggattgttagatcatgcatgtccattgtatctt 3807851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 471 - 561
Target Start/End: Original strand, 44182426 - 44182516
Alignment:
Q  471 tggtctaccatagatcctattaatatttttaatttaaaccgtttgatcttttttattaaaagataaacgttagatcatgcatgtctactgt 561  Q
    ||||| || ||||||||||||| | |||||||| ||||| ||||||||||||||| ||||  |  |  ||||||||||||||||| |||||    
T  44182426 tggtccactatagatcctattattttttttaatataaactgtttgatcttttttaataaagaaggattgttagatcatgcatgtccactgt 44182516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 340 - 388
Target Start/End: Complemental strand, 38242634 - 38242586
Alignment:
Q  340 ggcttatttgattcaatagtctctcaaataatttcaagtttttattttg 388  Q
    ||||||||||||||||  ||| |||||||||||||||||||| ||||||    
T  38242634 ggcttatttgattcaaaggtccctcaaataatttcaagttttcattttg 38242586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 340 - 388
Target Start/End: Complemental strand, 53624479 - 53624431
Alignment:
Q  340 ggcttatttgattcaatagtctctcaaataatttcaagtttttattttg 388  Q
    |||||||||||| |||| ||| |||||||||||||||||||| ||||||    
T  53624479 ggcttatttgatccaatggtccctcaaataatttcaagttttcattttg 53624431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 444 - 519
Target Start/End: Original strand, 34818220 - 34818295
Alignment:
Q  444 atgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgatct 519  Q
    ||||||||||| || ||||||||||| || |||| |||||| | ||||||| || ||||||| ||||||| |||||    
T  34818220 atgtctatggttgatcaaccttaaaaatgatctatcatagaccttattaattttgttaattttaaccgttcgatct 34818295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 388
Target Start/End: Complemental strand, 34819401 - 34819354
Alignment:
Q  341 gcttatttgattcaatagtctctcaaataatttcaagtttttattttg 388  Q
    ||||||||||| || ||||| |||||||||||||||||||| ||||||    
T  34819401 gcttatttgatccattagtccctcaaataatttcaagttttcattttg 34819354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 477 - 524
Target Start/End: Complemental strand, 54110231 - 54110185
Alignment:
Q  477 accatagatcctattaatatttttaatttaaaccgtttgatctttttt 524  Q
    |||||||||||||||||| ||||||||||||| |||||||| ||||||    
T  54110231 accatagatcctattaat-tttttaatttaaatcgtttgatttttttt 54110185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 445 - 519
Target Start/End: Original strand, 40244321 - 40244395
Alignment:
Q  445 tgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgatct 519  Q
    ||||||||||||||||| ||||||||||||| | | |||| | ||||||| || ||||||| |||  ||||||||    
T  40244321 tgtctatggtggaccaaacttaaaagtggtccatcgtagaccttattaattttgttaattttaactctttgatct 40244395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 450 - 491
Target Start/End: Complemental strand, 11224817 - 11224776
Alignment:
Q  450 atggtggaccaaccttaaaagtggtctaccatagatcctatt 491  Q
    |||||||||||||||||| ||||||| |||||||||| ||||    
T  11224817 atggtggaccaaccttaagagtggtccaccatagatcatatt 11224776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 392
Target Start/End: Complemental strand, 18458772 - 18458723
Alignment:
Q  343 ttatttgattcaatagtctctcaaataatttcaagtttttattttggtcc 392  Q
    ||||||||| || ||||| |  ||||||||||||||||||||||||||||    
T  18458772 ttatttgatccattagtcccctaaataatttcaagtttttattttggtcc 18458723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 471 - 524
Target Start/End: Complemental strand, 24487272 - 24487220
Alignment:
Q  471 tggtctaccatagatcctattaatatttttaatttaaaccgtttgatctttttt 524  Q
    ||||| |||||||||||||||||| |||||||||||||  || |||||||||||    
T  24487272 tggtcaaccatagatcctattaat-tttttaatttaaattgtatgatctttttt 24487220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 524
Target Start/End: Original strand, 36175359 - 36175477
Alignment:
Q  405 tttgccaaataaatccg-acggttaaatttaactcaaatgatgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaat 503  Q
    ||||||||||||||||| || ||||| |||||| | ||  ||||||||| |||| |||| ||| |  | ||| |||||| ||||||||||| | ||||||    
T  36175359 tttgccaaataaatccggactgttaagtttaaccccaa--atgtctatgatggatcaacattatatatagtccaccatatatcctattaatttctttaat 36175456  T
Q  504 ttaaaccgtttgatctttttt 524  Q
    ||||||| || ||| ||||||    
T  36175457 ttaaaccattcgatttttttt 36175477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 524
Target Start/End: Complemental strand, 53624381 - 53624264
Alignment:
Q  405 tttgccaaataaatcc-gacggttaaatttaactcaaatgatgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaat 503  Q
    |||||||||||||||| ||||||||  |||||| | ||  |||| |||||||||||||| ||| |  | ||| |||||||| | ||||||| |||| |||    
T  53624381 tttgccaaataaatccagacggttaggtttaaccccaa--atgtatatggtggaccaacattatagatagtccaccatagaccttattaat-ttttcaat 53624285  T
Q  504 ttaaaccgtttgatctttttt 524  Q
    || |||| |||||||||||||    
T  53624284 tttaaccttttgatctttttt 53624264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 340 - 392
Target Start/End: Complemental strand, 3210049 - 3209997
Alignment:
Q  340 ggcttatttgattcaatagtctctcaaataatttcaagtttttattttggtcc 392  Q
    ||||||||||||||||| ||| || ||||||||| || |||| ||||||||||    
T  3210049 ggcttatttgattcaatggtcccttaaataattttaaattttcattttggtcc 3209997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 340 - 392
Target Start/End: Original strand, 18197145 - 18197197
Alignment:
Q  340 ggcttatttgattcaatagtctctcaaataatttcaagtttttattttggtcc 392  Q
    |||||||||||| |||  ||| ||||||||||||||| |||| ||||||||||    
T  18197145 ggcttatttgatccaaatgtccctcaaataatttcaaattttcattttggtcc 18197197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 447 - 519
Target Start/End: Original strand, 41263775 - 41263847
Alignment:
Q  447 tctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgatct 519  Q
    ||||||||||| |||||||||||||||||||   |||| | ||||||| || ||||||| |||| || |||||    
T  41263775 tctatggtggatcaaccttaaaagtggtctattctagaccttattaattttgttaattttaaccattcgatct 41263847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 340 - 392
Target Start/End: Complemental strand, 53194988 - 53194936
Alignment:
Q  340 ggcttatttgattcaatagtctctcaaataatttcaagtttttattttggtcc 392  Q
    ||||||||| |||||||  |||||  |||||||||||||||| ||||||||||    
T  53194988 ggcttatttaattcaatgatctcttgaataatttcaagttttcattttggtcc 53194936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 71; Significance: 8e-32; HSPs: 54)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 444 - 566
Target Start/End: Complemental strand, 9226196 - 9226074
Alignment:
Q  444 atgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgatcttttttattaaaagataaacgttag 543  Q
    |||||||||||||| ||||||||||||||||| ||||||||||||||||||  ||||||||||||  ||||||||||||||||||||||| || | |||     
T  9226196 atgtctatggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaatttaaattgtttgatcttttttattaaaagagaaccattaa 9226097  T
Q  544 atcatgcatgtctactgtatctt 566  Q
    |||| ||||||||| | ||||||    
T  9226096 atcacgcatgtctattttatctt 9226074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 444 - 566
Target Start/End: Complemental strand, 6049406 - 6049284
Alignment:
Q  444 atgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgatcttttttattaaaagataaacgttag 543  Q
    |||||||||||||||||| || || ||||||| ||| |||||||| |||||  ||||||||||||||| ||||| |||||||||||||||  | | ||||    
T  6049406 atgtctatggtggaccaatctaaatagtggtccaccgtagatcctgttaattattttaatttaaaccgattgatattttttattaaaagaggaccattag 6049307  T
Q  544 atcatgcatgtctactgtatctt 566  Q
    |||||||||||||||||||||||    
T  6049306 atcatgcatgtctactgtatctt 6049284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 463 - 566
Target Start/End: Original strand, 12665944 - 12666047
Alignment:
Q  463 cttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgatcttttttattaaaagataaacgttagatcatgcatgtctactgta 562  Q
    ||||| ||||||| |||||||||| ||||||| || ||||||||||||||||||||||||||| ||||||||||| ||||||||||| |||| || ||||    
T  12665944 cttaagagtggtccaccatagatcttattaattttgttaatttaaaccgtttgatcttttttaataaaagataaatgttagatcatgtatgtttattgta 12666043  T
Q  563 tctt 566  Q
    ||||    
T  12666044 tctt 12666047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 405 - 559
Target Start/End: Original strand, 15232848 - 15233002
Alignment:
Q  405 tttgccaaataaatcc-gacggttaaatttaactcaaatgatgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaat 503  Q
    |||||||||||||||  ||| ||||| |||||| |||||||||| ||| |||||||||| |||||||||||| | ||||||||||||||||  |||||||    
T  15232848 tttgccaaataaatcatgaccgttaagtttaacccaaatgatgtatatagtggaccaactttaaaagtggtccatcatagatcctattaattattttaat 15232947  T
Q  504 ttaaaccgtttgatcttttttattaaaagataaacgttagatcatgcatgtctact 559  Q
     | ||||||||||| |||||| |||||||| || | || ||| |||||||||||||    
T  15232948 atcaaccgtttgatatttttt-ttaaaagagaaccattggattatgcatgtctact 15233002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 405 - 523
Target Start/End: Original strand, 49801713 - 49801832
Alignment:
Q  405 tttgccaaataaatccgacggttaaatttaac-tcaaatgatgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaat 503  Q
    ||||||||||||||||||| ||||| |||||| ||||||||||| || |||  ||||||||||||||||||| |||||| || ||||||||  |||||||    
T  49801713 tttgccaaataaatccgactgttaattttaacctcaaatgatgtttacggtaaaccaaccttaaaagtggtccaccataaattctattaattattttaat 49801812  T
Q  504 ttaaaccgtttgatcttttt 523  Q
    |||||||||||||| |||||    
T  49801813 ttaaaccgtttgattttttt 49801832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 444 - 532
Target Start/End: Complemental strand, 18821720 - 18821632
Alignment:
Q  444 atgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgatcttttttattaaaag 532  Q
    ||||||||||||||| |||||||| |||||||||||| ||||||||||||| |||| || || |||||||||||||||| | |||||||    
T  18821720 atgtctatggtggactaaccttaagagtggtctaccaaagatcctattaattttttaaaatttaaccgtttgatcttttgttttaaaag 18821632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 410 - 515
Target Start/End: Complemental strand, 16965142 - 16965035
Alignment:
Q  410 caaataaat-ccgacggttaaatttaactc-aaatgatgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaa 507  Q
    ||||||||| |||| |||||| |||||| | ||||||||| |||||||||||||| |||| ||||||| ||||||||||||||||||  ||||||||| |    
T  16965142 caaataaattccgatggttaagtttaaccccaaatgatgtatatggtggaccaactttaagagtggtccaccatagatcctattaattattttaatttca 16965043  T
Q  508 accgtttg 515  Q
    ||||||||    
T  16965042 accgtttg 16965035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 405 - 517
Target Start/End: Complemental strand, 45585029 - 45584915
Alignment:
Q  405 tttgccaaataaatcc-gacggttaaatttaa-ctcaaatgatgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaa 502  Q
    |||||||||||||||| ||| ||||| ||||| | ||||||||||||||||||| ||||| |||| |||| || ||||||||||||||||||  ||||||    
T  45585029 tttgccaaataaatcctgaccgttaagtttaaacccaaatgatgtctatggtggcccaactttaagagtgctccaccatagatcctattaattattttaa 45584930  T
Q  503 tttaaaccgtttgat 517  Q
    | |||| ||||||||    
T  45584929 tataaatcgtttgat 45584915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 444 - 525
Target Start/End: Original strand, 51445725 - 51445806
Alignment:
Q  444 atgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgatctttttta 525  Q
    |||||||||||||| |||| |||||| ||||| ||||||||||||||||||  || |||||||||||||||||| |||||||    
T  51445725 atgtctatggtggatcaactttaaaaatggtccaccatagatcctattaattattctaatttaaaccgtttgatttttttta 51445806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 444 - 508
Target Start/End: Complemental strand, 13147397 - 13147333
Alignment:
Q  444 atgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaa 508  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||||||||  ||||||||||||    
T  13147397 atgtctatggtggaccaaccttaatagtggtccaccatagatcctattaattattttaatttaaa 13147333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 444 - 524
Target Start/End: Original strand, 14478401 - 14478481
Alignment:
Q  444 atgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgatctttttt 524  Q
    |||||||||||||||| || |||||| ||||| ||||||||||||||||||  || |||||||||||||||||| ||||||    
T  14478401 atgtctatggtggaccgactttaaaaatggtccaccatagatcctattaattattctaatttaaaccgtttgatttttttt 14478481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 444 - 524
Target Start/End: Complemental strand, 48097013 - 48096933
Alignment:
Q  444 atgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgatctttttt 524  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||||||||  ||| ||| | || |||||||||||||||    
T  48097013 atgtatatggtggaccaaccttaagagtggtctaccatagatcctattaattatttaaatattaatcgtttgatctttttt 48096933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 447 - 524
Target Start/End: Original strand, 13894752 - 13894828
Alignment:
Q  447 tctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgatctttttt 524  Q
    ||||||||| |||||||| || ||| |||||||||||||||| |||||  ||||||||||||||||||||||||||||    
T  13894752 tctatggtg-accaacctaaagagttgtctaccatagatcctgttaattattttaatttaaaccgtttgatctttttt 13894828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 405 - 524
Target Start/End: Original strand, 46110378 - 46110496
Alignment:
Q  405 tttgccaaataaatc-cgacggttaaatttaactcaaatgatgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaat 503  Q
    ||||| ||||||||| |||| ||||| |||||||| ||  || ||||||||||||||||||||| ||||||| | | |||| | ||||||| || |||||    
T  46110378 tttgctaaataaatctcgactgttaactttaactctaa--atatctatggtggaccaaccttaagagtggtccatcgtagaccttattaattttgttaat 46110475  T
Q  504 ttaaaccgtttgatctttttt 524  Q
    || ||||||||||||||||||    
T  46110476 tttaaccgtttgatctttttt 46110496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 444 - 525
Target Start/End: Complemental strand, 52078125 - 52078044
Alignment:
Q  444 atgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgatctttttta 525  Q
    |||||||||||| ||||||||||| |||| |  ||||||||||||||||||  ||||||||| ||||||||||| |||||||    
T  52078125 atgtctatggtgaaccaaccttaagagtgatacaccatagatcctattaattattttaattttaaccgtttgatttttttta 52078044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 444 - 524
Target Start/End: Complemental strand, 15746747 - 15746668
Alignment:
Q  444 atgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgatctttttt 524  Q
    |||||||||||||||||| ||||| ||||||| ||||||||||||||||||  ||||||||| |||| |||||||| ||||    
T  15746747 atgtctatggtggaccaatcttaagagtggtccaccatagatcctattaat-cttttaattttaaccctttgatctatttt 15746668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 444 - 524
Target Start/End: Original strand, 48527669 - 48527749
Alignment:
Q  444 atgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgatctttttt 524  Q
    ||||||||||| ||||||| |||| ||||||| |||||||||| ||| |||  ||||||||||||| ||||||||||||||    
T  48527669 atgtctatggtcgaccaactttaagagtggtccaccatagatcttatcaattattttaatttaaactgtttgatctttttt 48527749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 480 - 566
Target Start/End: Original strand, 8027403 - 8027489
Alignment:
Q  480 atagatcctattaatatttttaatttaaaccgtttgatcttttttattaaaagataaacgttagatcatgcatgtctactgtatctt 566  Q
    ||||||||||||| | |||||||| ||||||||||||||||||||| ||||  |  |  ||||||||||||||||| ||||||||||    
T  8027403 atagatcctattattttttttaatataaaccgtttgatcttttttaataaagaaggattgttagatcatgcatgtccactgtatctt 8027489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 444 - 534
Target Start/End: Original strand, 46467281 - 46467370
Alignment:
Q  444 atgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgatcttttttattaaaagat 534  Q
    ||||||||||||||||||| ||||||||| || ||| |||||  |||||| ||||||||||||||||||||||| | |||| | |||||||    
T  46467281 atgtctatggtggaccaacattaaaagtgatccaccgtagatgttattaa-atttttaatttaaaccgtttgatatattttctaaaaagat 46467370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 444 - 532
Target Start/End: Complemental strand, 15072771 - 15072682
Alignment:
Q  444 atgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgatctt-ttttattaaaag 532  Q
    ||||||||||||||||||||| || ||||||| ||| ||||  |||||||| || ||||||||||  |||||||||| ||||||||||||    
T  15072771 atgtctatggtggaccaacctaaagagtggtccaccgtagactctattaattttcttaatttaaattgtttgatctttttttattaaaag 15072682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 444 - 533
Target Start/End: Original strand, 26802075 - 26802164
Alignment:
Q  444 atgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgatcttttttattaaaaga 533  Q
    ||||||| |||| ||||||||||| ||| ||| || ||||||| |||||||  |||||||||||||||||||||  ||||| ||||||||    
T  26802075 atgtctaaggtgaaccaaccttaagagttgtccactatagatcatattaatcattttaatttaaaccgtttgattattttttttaaaaga 26802164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 444 - 524
Target Start/End: Complemental strand, 35943428 - 35943347
Alignment:
Q  444 atgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaattt-aaaccgtttgatctttttt 524  Q
    |||||||||||||||||||||||| |||| || |||||||| | ||||||  |||||| ||| |||||||||||||||||||    
T  35943428 atgtctatggtggaccaaccttaagagtgatccaccatagaccttattaaattttttattttaaaaccgtttgatctttttt 35943347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 444 - 521
Target Start/End: Complemental strand, 41873952 - 41873875
Alignment:
Q  444 atgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgatcttt 521  Q
    |||||||||||||||||||||||| ||||||| ||||||||    |||||| |||| ||||| |||||||||||||||    
T  41873952 atgtctatggtggaccaaccttaagagtggtccaccatagacttcattaattttttaaattttaaccgtttgatcttt 41873875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 340 - 392
Target Start/End: Complemental strand, 46111606 - 46111554
Alignment:
Q  340 ggcttatttgattcaatagtctctcaaataatttcaagtttttattttggtcc 392  Q
    ||||||||||||||||| ||| || ||||||||||||||||||||||||||||    
T  46111606 ggcttatttgattcaatggtcccttaaataatttcaagtttttattttggtcc 46111554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 496 - 559
Target Start/End: Complemental strand, 44278308 - 44278245
Alignment:
Q  496 tttttaatttaaaccgtttgatcttttttattaaaagataaacgttagatcatgcatgtctact 559  Q
    ||||||||||||||  |||||||||||||||||||| || | |||||||| |||||||||||||    
T  44278308 tttttaatttaaactatttgatcttttttattaaaacatgatcgttagattatgcatgtctact 44278245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 340 - 391
Target Start/End: Complemental strand, 45585127 - 45585076
Alignment:
Q  340 ggcttatttgattcaatagtctctcaaataatttcaagtttttattttggtc 391  Q
    |||||||||||| |||||||| |||||||||||||||||||| |||||||||    
T  45585127 ggcttatttgatccaatagtccctcaaataatttcaagttttcattttggtc 45585076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 453 - 527
Target Start/End: Original strand, 28050465 - 28050539
Alignment:
Q  453 gtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgatcttttttatt 527  Q
    ||||||||| ||||| |||| || ||||||||||||||| || || |||| || |||||||||||||||||||||    
T  28050465 gtggaccaatcttaagagtgttccaccatagatcctattgattttcttaactttaaccgtttgatcttttttatt 28050539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 405 - 477
Target Start/End: Complemental strand, 49802915 - 49802844
Alignment:
Q  405 tttgccaaataaatcc-gacggttaaatttaactcaaatgatgtctatggtggaccaaccttaaaagtggtcta 477  Q
    |||||||||||||||| ||||||||| || ||||| ||  |||||||||||| |||||||||||||||||||||    
T  49802915 tttgccaaataaatcccgacggttaacttcaactctaa--atgtctatggtgtaccaaccttaaaagtggtcta 49802844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 444 - 505
Target Start/End: Complemental strand, 3617478 - 3617417
Alignment:
Q  444 atgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaattt 505  Q
    |||||||||||| ||||||||||| ||||||| || |||||||||||||||  |||||||||    
T  3617478 atgtctatggtgaaccaaccttaagagtggtccactatagatcctattaattattttaattt 3617417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 444 - 517
Target Start/End: Complemental strand, 5613065 - 5612993
Alignment:
Q  444 atgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgat 517  Q
    |||| ||||||||| || |||| |||||| || ||||||||||||||||||  |||||||||||||||||||||    
T  5613065 atgtttatggtggatca-cctttaaagtgatccaccatagatcctattaattattttaatttaaaccgtttgat 5612993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 405 - 519
Target Start/End: Original strand, 16963930 - 16964043
Alignment:
Q  405 tttgccaaataaatcc-gacggttaaatttaactcaaatgatgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaat 503  Q
    |||||||||||||| | ||| ||||| |||||||| ||  |||| |||| |||||||||||||||||||||| | |||||| | ||||||| || |||||    
T  16963930 tttgccaaataaatgctgactgttaactttaactctaa--atgtttatgatggaccaaccttaaaagtggtccatcatagaccttattaattttgttaat 16964027  T
Q  504 ttaaaccgtttgatct 519  Q
    || |||| || |||||    
T  16964028 tttaacccttcgatct 16964043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 405 - 514
Target Start/End: Original strand, 27814388 - 27814497
Alignment:
Q  405 tttgccaaataaatcc-gacggttaaattt-aactcaaatgatgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaa 502  Q
    |||||||||||||||| ||||||||| ||| ||||| ||  ||||||||||||||||||| |||||||||||| | | || | | ||||||| || ||||    
T  27814388 tttgccaaataaatcccgacggttaacttttaactctaa--atgtctatggtggaccaactttaaaagtggtccatcgtaaaccttattaattttgttaa 27814485  T
Q  503 tttaaaccgttt 514  Q
    ||| ||||||||    
T  27814486 ttttaaccgttt 27814497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 444 - 520
Target Start/End: Complemental strand, 44999443 - 44999367
Alignment:
Q  444 atgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgatctt 520  Q
    |||||||||||||||||| | ||| ||||||  |||||||||| |||||||  |||||| ||||||| |||||||||    
T  44999443 atgtctatggtggaccaatcgtaagagtggttcaccatagatcttattaattattttaacttaaaccatttgatctt 44999367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 340 - 392
Target Start/End: Original strand, 52627513 - 52627565
Alignment:
Q  340 ggcttatttgattcaatagtctctcaaataatttcaagtttttattttggtcc 392  Q
    |||||||||||| |||| ||| |||||||||||||||||||| ||||||||||    
T  52627513 ggcttatttgatccaatggtccctcaaataatttcaagttttcattttggtcc 52627565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 469 - 524
Target Start/End: Complemental strand, 46318574 - 46318519
Alignment:
Q  469 agtggtctaccatagatcctattaatatttttaatttaaaccgtttgatctttttt 524  Q
    ||||||| |||||||||||||||||   |||||||||||| |||||||||||||||    
T  46318574 agtggtccaccatagatcctattaaatattttaatttaaatcgtttgatctttttt 46318519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 471 - 521
Target Start/End: Original strand, 27556431 - 27556480
Alignment:
Q  471 tggtctaccatagatcctattaatatttttaatttaaaccgtttgatcttt 521  Q
    ||||| |||||||||||||||||| |||||||||||||| |||||||||||    
T  27556431 tggtccaccatagatcctattaat-tttttaatttaaacagtttgatcttt 27556480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 438 - 484
Target Start/End: Original strand, 34350242 - 34350288
Alignment:
Q  438 caaatgatgtctatggtggaccaaccttaaaagtggtctaccataga 484  Q
    |||||||||||||||||||| ||||||||| ||||||| ||||||||    
T  34350242 caaatgatgtctatggtggatcaaccttaagagtggtccaccataga 34350288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 446 - 524
Target Start/End: Complemental strand, 34351943 - 34351866
Alignment:
Q  446 gtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgatctttttt 524  Q
    ||||||||||||||||| |||| ||||||| |||||| | | ||||||||||| |||||| |||| |||| ||||||||    
T  34351943 gtctatggtggaccaac-ttaagagtggtccaccataaaccttattaatatttctaattttaaccctttggtctttttt 34351866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 342 - 392
Target Start/End: Complemental strand, 35943563 - 35943513
Alignment:
Q  342 cttatttgattcaatagtctctcaaataatttcaagtttttattttggtcc 392  Q
    ||||||||||| ||| |||||| |||||||||||| |||||||||||||||    
T  35943563 cttatttgatttaatggtctcttaaataatttcaaatttttattttggtcc 35943513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 470 - 524
Target Start/End: Complemental strand, 51042295 - 51042241
Alignment:
Q  470 gtggtctaccatagatcctattaatatttttaatttaaaccgtttgatctttttt 524  Q
    ||||||||||||||| |  |||||| | |||||||||||||||||||||||||||    
T  51042295 gtggtctaccatagacctcattaatttgtttaatttaaaccgtttgatctttttt 51042241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 443 - 508
Target Start/End: Complemental strand, 9485286 - 9485221
Alignment:
Q  443 gatgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaa 508  Q
    ||||||||||||||| |||| |||| ||||||  |||||| |||||||||||  ||||||||||||    
T  9485286 gatgtctatggtggatcaactttaagagtggttaaccataaatcctattaattattttaatttaaa 9485221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 444 - 524
Target Start/End: Complemental strand, 13642541 - 13642462
Alignment:
Q  444 atgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgatctttttt 524  Q
    ||||||| ||||||| ||| ||| | ||||||||||||| |   |||||| ||||||||||| ||||||||||||||||||    
T  13642541 atgtctaaggtggacgaactttacaggtggtctaccataaactttattaaaatttttaattt-aaccgtttgatctttttt 13642462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 444 - 524
Target Start/End: Original strand, 16123422 - 16123502
Alignment:
Q  444 atgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgatctttttt 524  Q
    ||||||||||| ||||||| ||||||||| || |||||| | | |||||| ||||||| |||||||| ||| |||| ||||    
T  16123422 atgtctatggtagaccaactttaaaagtgatccaccatataccttattaaaatttttagtttaaaccctttaatctgtttt 16123502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 444 - 484
Target Start/End: Original strand, 23091487 - 23091527
Alignment:
Q  444 atgtctatggtggaccaaccttaaaagtggtctaccataga 484  Q
    ||||||||||||||||||| |||||||||||| ||||||||    
T  23091487 atgtctatggtggaccaactttaaaagtggtccaccataga 23091527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 340 - 392
Target Start/End: Complemental strand, 34352074 - 34352022
Alignment:
Q  340 ggcttatttgattcaatagtctctcaaataatttcaagtttttattttggtcc 392  Q
    |||||||||||| |||||||| || ||||||||| ||||||| ||||||||||    
T  34352074 ggcttatttgatccaatagtcccttaaataattttaagttttcattttggtcc 34352022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 406 - 557
Target Start/End: Complemental strand, 50444717 - 50444567
Alignment:
Q  406 ttgccaaataaatccga-cggttaaatttaactcaaatgatgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatt 504  Q
    ||||||||||||||| | | ||||| |||||||| ||  | ||||||| |||||||||||||| |||| || | | |||| | ||||||| || || |||    
T  50444717 ttgccaaataaatccaaaccgttaactttaactccaaa-acgtctatgttggaccaaccttaagagtg-tccatcgtagaccttattaattttgttcatt 50444620  T
Q  505 taaaccgtttgatcttttttattaaaagataaacgttagatcatgcatgtcta 557  Q
    | |||||||||||||||| | ||||||||| | | || ||| |||||||||||    
T  50444619 ttaaccgtttgatcttttgttttaaaagatgatcattggattatgcatgtcta 50444567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 340 - 392
Target Start/End: Complemental strand, 50444816 - 50444764
Alignment:
Q  340 ggcttatttgattcaatagtctctcaaataatttcaagtttttattttggtcc 392  Q
    ||||||||||||||||| ||| ||||||||||||||| |||| ||||| ||||    
T  50444816 ggcttatttgattcaatggtccctcaaataatttcaaattttcattttagtcc 50444764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 447 - 510
Target Start/End: Complemental strand, 10722354 - 10722291
Alignment:
Q  447 tctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaacc 510  Q
    |||||| ||||||||||| || ||||||| | ||||||| ||| |||| |||||||||||||||    
T  10722354 tctatgatggaccaacctaaagagtggtccatcatagattctactaatttttttaatttaaacc 10722291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 447 - 533
Target Start/End: Complemental strand, 46111474 - 46111388
Alignment:
Q  447 tctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgatcttttttattaaaaga 533  Q
    ||||||||||| |||| |||||||||||| |  ||||||| |||||||  | ||||| | ||| ||||||| |||||| ||||||||    
T  46111474 tctatggtggatcaactttaaaagtggtccatgatagatcttattaattgtgttaatcttaactgtttgatttttttttttaaaaga 46111388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 444 - 517
Target Start/End: Original strand, 26286547 - 26286619
Alignment:
Q  444 atgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgat 517  Q
    |||| ||||||||| || |||| |||||| || ||||||||  ||||||||  |||||||||||||||||||||    
T  26286547 atgtttatggtggatca-cctttaaagtgatccaccatagactctattaattattttaatttaaaccgtttgat 26286619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 452 - 517
Target Start/End: Complemental strand, 51300233 - 51300168
Alignment:
Q  452 ggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgat 517  Q
    ||||||||||| |||||||||||| |||||||| | ||||||| || | ||||| |||| ||||||    
T  51300233 ggtggaccaacattaaaagtggtccaccatagaccttattaattttatgaattttaaccatttgat 51300168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 470 - 558
Target Start/End: Original strand, 5804877 - 5804965
Alignment:
Q  470 gtggtctaccatagatcctattaatatttttaatttaaaccgtttgatcttttttattaaaagataaacgttagatcatgcatgtctac 558  Q
    |||||| |||| ||| | || ||||| ||||||| | ||||||||||| ||||||||| ||| | || | ||||||||| |||||||||    
T  5804877 gtggtccaccaaagaccttagtaatacttttaatctcaaccgtttgatattttttattgaaaaacaaccattagatcatacatgtctac 5804965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 340 - 392
Target Start/End: Original strand, 14470854 - 14470906
Alignment:
Q  340 ggcttatttgattcaatagtctctcaaataatttcaagtttttattttggtcc 392  Q
    |||||||||||| |||| ||| |  ||||||||||||||||| ||||||||||    
T  14470854 ggcttatttgatccaatggtcccctaaataatttcaagttttcattttggtcc 14470906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 446 - 522
Target Start/End: Original strand, 14470993 - 14471069
Alignment:
Q  446 gtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgatctttt 522  Q
    |||||| ||||||||||||||| ||||||| |||||| |    |||||| |||| |||||  |||||||||||||||    
T  14470993 gtctatagtggaccaaccttaagagtggtccaccataaacttcattaattttttaaattttgaccgtttgatctttt 14471069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 68; Significance: 5e-30; HSPs: 3)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 438 - 525
Target Start/End: Complemental strand, 54170 - 54083
Alignment:
Q  438 caaatgatgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgatctttttta 525  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||| ||||||| |||||||    
T  54170 caaatgatgtctatggtggaccaaccttaaaagtggtccaccatagatcctattaattattttaatttaaactgtttgatttttttta 54083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 405 - 519
Target Start/End: Original strand, 52688 - 52801
Alignment:
Q  405 tttgccaaataaatcc-gacggttaaatttaactcaaatgatgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaat 503  Q
    |||||||||||||||| ||| ||||| |||||||  ||  |||| ||||||||||||||||||||| |||||||   |||| | ||||||| || |||||    
T  52688 tttgccaaataaatcccgacagttaactttaactttaa--atgtatatggtggaccaaccttaaaaatggtctatggtagaccttattaattttcttaat 52785  T
Q  504 ttaaaccgtttgatct 519  Q
    || | ||||| |||||    
T  52786 tttatccgttcgatct 52801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 340 - 391
Target Start/End: Complemental strand, 54303 - 54252
Alignment:
Q  340 ggcttatttgattcaatagtctctcaaataatttcaagtttttattttggtc 391  Q
    |||||||||||| || | ||| |||||||||||||||||||| |||||||||    
T  54303 ggcttatttgatccattggtccctcaaataatttcaagttttaattttggtc 54252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 67; Significance: 2e-29; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 405 - 525
Target Start/End: Complemental strand, 43595 - 43473
Alignment:
Q  405 tttgccaaataaatcc-gacggttaaatttaactcaaa-tgatgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaa 502  Q
    |||||||||||| ||| ||||||||| |||||| | || |||||||||||||||||||| ||||| ||||||| ||||||||||||||||||  ||||||    
T  43595 tttgccaaataagtcctgacggttaagtttaaccccaagtgatgtctatggtggaccaatcttaagagtggtccaccatagatcctattaattattttaa 43496  T
Q  503 tttaaaccgtttgatctttttta 525  Q
    ||||||||||||||| |||||||    
T  43495 tttaaaccgtttgatttttttta 43473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 65; Significance: 3e-28; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 444 - 566
Target Start/End: Original strand, 32705 - 32831
Alignment:
Q  444 atgtctatggtggaccaaccttaaaagtggtctaccatagatcctatta--atatttttaatttaaaccgtttgatc--ttttttattaaaagataaacg 539  Q
    |||||||||||||||||||||||  ||||||| | ||||||||||||||   | |||||||||||||||||||||||  |||||||||||||||  | |     
T  32705 atgtctatggtggaccaaccttaggagtggtccatcatagatcctattattttttttttaatttaaaccgtttgatcttttttttattaaaagaggacca 32804  T
Q  540 ttagatcatgcatgtctactgtatctt 566  Q
    |||||||||||||||||||||||||||    
T  32805 ttagatcatgcatgtctactgtatctt 32831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 65; Significance: 3e-28; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 405 - 524
Target Start/End: Complemental strand, 18346770 - 18346650
Alignment:
Q  405 tttgccaaataaatccgacggttaaatttaac-tcaaatgatgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaat 503  Q
    ||||||||||||||||||| ||||| |||||| ||||||||||| || |||| ||||||||||| ||||||| || ||| |||||||||||  |||||||    
T  18346770 tttgccaaataaatccgactgttaattttaacctcaaatgatgtttacggtgaaccaaccttaagagtggtccactataaatcctattaattattttaat 18346671  T
Q  504 ttaaaccgtttgatctttttt 524  Q
    |||||||||||||| ||||||    
T  18346670 ttaaaccgtttgatttttttt 18346650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 405 - 523
Target Start/End: Complemental strand, 7311745 - 7311626
Alignment:
Q  405 tttgccaaataaatccg-acggttaaatttaactcaaatgatgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaat 503  Q
    ||||||||||||||||  || ||||| |||||  |||||||||||||||||| ||||||||||| ||||||| |||||| |||||||||||  |||||||    
T  7311745 tttgccaaataaatcctcacagttaagtttaatccaaatgatgtctatggtgaaccaaccttaagagtggtccaccataaatcctattaattattttaat 7311646  T
Q  504 ttaaaccgtttgatcttttt 523  Q
    |||||||||||||| |||||    
T  7311645 ttaaaccgtttgattttttt 7311626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 405 - 517
Target Start/End: Complemental strand, 5187642 - 5187529
Alignment:
Q  405 tttgccaaataaatcc-gacggttaaatttaactcaaatgatgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaat 503  Q
    |||||||||||||||| ||||||||| |||||| |||||| ||||||| ||||||||||||||||||||||  ||||||||||||||||||  | |||||    
T  5187642 tttgccaaataaatcctgacggttaagtttaacccaaatgttgtctatagtggaccaaccttaaaagtggttcaccatagatcctattaattatattaat 5187543  T
Q  504 ttaaaccgtttgat 517  Q
    || ||| |||||||    
T  5187542 ttcaactgtttgat 5187529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 409 - 517
Target Start/End: Original strand, 17837716 - 17837825
Alignment:
Q  409 ccaaataaatccgacggttaaatttaactc-aaatgatgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaa 507  Q
    |||||||||||| || ||||| |||||| | |||||||||||||||||||| ||| |||| ||||||| ||||||||||||||||||  ||||||||| |    
T  17837716 ccaaataaatccaacagttaagtttaaccccaaatgatgtctatggtggacaaacattaagagtggtccaccatagatcctattaattattttaatttca 17837815  T
Q  508 accgtttgat 517  Q
    ||||||||||    
T  17837816 accgtttgat 17837825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 438 - 566
Target Start/End: Original strand, 23392345 - 23392473
Alignment:
Q  438 caaatgatgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgat-cttttttattaaaagataa 536  Q
    ||||||||| ||| |||||| ||||||||||||||||| ||||||||||||||||||  ||||||||| |||||||||||  |||||| |||||||||||    
T  23392345 caaatgatg-ctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaatttcaaccgtttgatattttttttttaaaagataa 23392443  T
Q  537 acgttagatcatgcatgtctactgtatctt 566  Q
     | |||||| ||||| ||||| | ||||||    
T  23392444 ccattagattatgcaagtctattttatctt 23392473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 409 - 524
Target Start/End: Complemental strand, 29381746 - 29381630
Alignment:
Q  409 ccaaataaatccgacggttaaatttaactc-aaatgatgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaa 507  Q
    |||||||||||| || ||||| |||||| | ||||||||||| |||||||| |||||||| |||| || ||||||||||||||||||  ||||||||| |    
T  29381746 ccaaataaatccaacagttaagtttaaccccaaatgatgtctgtggtggacaaaccttaagagtgatccaccatagatcctattaattattttaatttca 29381647  T
Q  508 accgtttgatctttttt 524  Q
    |||||||||| ||||||    
T  29381646 accgtttgatttttttt 29381630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 444 - 524
Target Start/End: Original strand, 11722921 - 11723001
Alignment:
Q  444 atgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgatctttttt 524  Q
    |||||||||||||||| || |||||| ||||| ||||||||||||||||||  || |||||||||||||||||| ||||||    
T  11722921 atgtctatggtggaccgactttaaaaatggtccaccatagatcctattaattattctaatttaaaccgtttgatttttttt 11723001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 444 - 566
Target Start/End: Original strand, 12669858 - 12669981
Alignment:
Q  444 atgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgatctttttt-attaaaagataaacgtta 542  Q
    |||| ||||||||||||||||||| ||||||| |||||||||| ||||| | || ||||| |||||  ||||||||||||| |||||| ||  |   |||    
T  12669858 atgtgtatggtggaccaaccttaagagtggtccaccatagatcatattatttttattaatataaactatttgatctttttttattaaaggaggactatta 12669957  T
Q  543 gatcatgcatgtctactgtatctt 566  Q
    ||||||||||||||||| ||||||    
T  12669958 gatcatgcatgtctactatatctt 12669981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 405 - 510
Target Start/End: Complemental strand, 23397374 - 23397270
Alignment:
Q  405 tttgccaaataaatcc-gacggttaaatttaactcaaatgatgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaat 503  Q
    |||||||||||||||| ||| |||||||||||||  ||  |||||||||||||||||||||||||||| ||| ||| || | | ||||||| || |||||    
T  23397374 tttgccaaataaatcccgaccgttaaatttaacttcaa--atgtctatggtggaccaaccttaaaagtagtccaccgtataccttattaattttgttaat 23397277  T
Q  504 ttaaacc 510  Q
    || ||||    
T  23397276 tttaacc 23397270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 480 - 566
Target Start/End: Complemental strand, 13847866 - 13847781
Alignment:
Q  480 atagatcctattaatatttttaatttaaaccgtttgatcttttttattaaaagataaacgttagatcatgcatgtctactgtatctt 566  Q
    ||||||||||||| | |||||||| ||||||||||||||||||||| ||||  |  |   |||||||||||||||| ||||||||||    
T  13847866 atagatcctattatt-tttttaatataaaccgtttgatcttttttaataaagaaggatttttagatcatgcatgtccactgtatctt 13847781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 444 - 517
Target Start/End: Original strand, 11967351 - 11967424
Alignment:
Q  444 atgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgat 517  Q
    |||||||| ||||||||||||| | || |||| | |||||||| |||||||  ||||||||||||| |||||||    
T  11967351 atgtctattgtggaccaaccttgagaggggtccatcatagatcatattaattattttaatttaaactgtttgat 11967424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 405 - 482
Target Start/End: Complemental strand, 32507046 - 32506969
Alignment:
Q  405 tttgccaaataaatcc--gacggttaaatttaactcaaatgatgtctatggtggaccaaccttaaaagtggtctaccata 482  Q
    ||||||||||||||||  ||| ||||| |||||| | ||  || ||||||||||||||||||||| ||||||||||||||    
T  32507046 tttgccaaataaatccttgactgttaagtttaaccccaa--atatctatggtggaccaaccttaagagtggtctaccata 32506969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 444 - 524
Target Start/End: Original strand, 22298736 - 22298815
Alignment:
Q  444 atgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgatctttttt 524  Q
    ||||||| ||||||| ||| ||| | ||||||||||||| |   |||||| ||||||||||| ||||||||||||||||||    
T  22298736 atgtctaaggtggacgaactttacaggtggtctaccataaactttattaaaatttttaattt-aaccgtttgatctttttt 22298815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 436 - 482
Target Start/End: Original strand, 2352608 - 2352654
Alignment:
Q  436 ctcaaatgatgtctatggtggaccaaccttaaaagtggtctaccata 482  Q
    ||||||| |||||||||||||| |||| ||||||||| |||||||||    
T  2352608 ctcaaataatgtctatggtggatcaactttaaaagtgatctaccata 2352654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 459 - 531
Target Start/End: Original strand, 32505817 - 32505890
Alignment:
Q  459 caaccttaaaagtggtctaccatagatcctattaatatttttaa-tttaaaccgtttgatcttttttattaaaa 531  Q
    |||| |||| ||||||| |||||||| | ||||||  ||||||| ||||||||||||||||| |||| ||||||    
T  32505817 caacattaagagtggtccaccatagaccttattaaattttttaagtttaaaccgtttgatctatttttttaaaa 32505890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 405 - 519
Target Start/End: Original strand, 29380287 - 29380400
Alignment:
Q  405 tttgccaaataaatcc-gacggttaaatttaactcaaatgatgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaat 503  Q
    |||||||||||||||| ||| ||||| |||||||  ||  |||| ||||||||| ||||||||||||| ||| | | |||| | ||||||| || |||||    
T  29380287 tttgccaaataaatcccgaccgttaattttaacttcaa--atgtatatggtggatcaaccttaaaagtagtccatcgtagaccttattaattttgttaat 29380384  T
Q  504 ttaaaccgtttgatct 519  Q
    || |||| || |||||    
T  29380385 tttaaccattcgatct 29380400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 56; Significance: 7e-23; HSPs: 4)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 405 - 562
Target Start/End: Original strand, 124065 - 124220
Alignment:
Q  405 tttgccaaataaatccg-acggttaaatttaactcaaatgatgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaat 503  Q
    ||||||||||||||||  |||||||| |||||| | ||  || ||||||||||||||||||||| ||||||| |||||||||| |||||| ||| |||||    
T  124065 tttgccaaataaatccttacggttaagtttaaccccaa--atatctatggtggaccaaccttaagagtggtccaccatagatcgtattaa-attgttaat 124161  T
Q  504 ttaaaccgtttgatcttttttattaaaagataaacgttagatcatgcatgtctactgta 562  Q
    ||||| |||||||||| |||| | ||||||||| | |  ||| ||||||||||| ||||    
T  124162 ttaaatcgtttgatctattttttaaaaagataaccataggattatgcatgtctattgta 124220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 405 - 518
Target Start/End: Complemental strand, 125253 - 125137
Alignment:
Q  405 tttgccaaataaatccga-cggttaaatttaactc-aaatgatgtctatggtggaccaaccttaaaagtggtctaccatagatcctatt-aatattttta 501  Q
    |||||||||||||||| | ||||||| |||||| | ||||||||| |||| |||||||||||||||||||||| |||||||| | |||| ||| ||||||    
T  125253 tttgccaaataaatcctaacggttaagtttaaccccaaatgatgtatatgatggaccaaccttaaaagtggtccaccatagaccttattaaattttttta 125154  T
Q  502 atttaaaccgtttgatc 518  Q
    ||||||||| |||||||    
T  125153 atttaaaccctttgatc 125137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #3
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 340 - 392
Target Start/End: Original strand, 123967 - 124019
Alignment:
Q  340 ggcttatttgattcaatagtctctcaaataatttcaagtttttattttggtcc 392  Q
    |||||||||||| |||| |||  ||||||||||||||||||| ||||||||||    
T  123967 ggcttatttgatccaatggtccttcaaataatttcaagttttcattttggtcc 124019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 392
Target Start/End: Complemental strand, 125350 - 125299
Alignment:
Q  341 gcttatttgattcaatagtctctcaaataatttcaagtttttattttggtcc 392  Q
    ||||||||||| |||| ||| ||||||||||||||| |||| ||||||||||    
T  125350 gcttatttgatccaatggtccctcaaataatttcaaattttcattttggtcc 125299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 53; Significance: 4e-21; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 444 - 524
Target Start/End: Original strand, 127568 - 127648
Alignment:
Q  444 atgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgatctttttt 524  Q
    |||||||||||| | ||||||||| ||||||| |||||||||||||||||| |||||||||||||||||| ||| ||||||    
T  127568 atgtctatggtgaaacaaccttaagagtggtccaccatagatcctattaatgtttttaatttaaaccgttagatttttttt 127648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2071 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold2071
Description:

Target: scaffold2071; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 454 - 534
Target Start/End: Complemental strand, 652 - 572
Alignment:
Q  454 tggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgatcttttttattaaaagat 534  Q
    |||||||||||||| ||||||| |||||||| | ||||||  |||||||||||||||||||||||| |||| | |||||||    
T  652 tggaccaaccttaagagtggtccaccatagaccttattaaattttttaatttaaaccgtttgatctgttttttaaaaagat 572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 45; Significance: 2e-16; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 449 - 517
Target Start/End: Original strand, 108654 - 108722
Alignment:
Q  449 tatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgat 517  Q
    ||||||||||||||||||||||||||| ||||||||| ||||||||  || ||||||||||| ||||||    
T  108654 tatggtggaccaaccttaaaagtggtccaccatagatgctattaattattataatttaaaccttttgat 108722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 340 - 392
Target Start/End: Complemental strand, 109863 - 109811
Alignment:
Q  340 ggcttatttgattcaatagtctctcaaataatttcaagtttttattttggtcc 392  Q
    ||||||||||||||||| ||| || ||||||||||||||||| ||||||||||    
T  109863 ggcttatttgattcaatggtcccttaaataatttcaagttttcattttggtcc 109811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 471 - 566
Target Start/End: Complemental strand, 83175 - 83080
Alignment:
Q  471 tggtctaccatagatcctattaatatttttaatttaaaccgtttgatcttttttattaaaagataaacgttagatcatgcatgtctactgtatctt 566  Q
    ||||| || ||||||||||||| | |||||||| ||||||||||||||||||||| ||||  |  |  ||||||||||||||||| ||||||||||    
T  83175 tggtccactatagatcctattattttttttaatataaaccgtttgatcttttttaataaagaaggattgttagatcatgcatgtccactgtatctt 83080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 444 - 533
Target Start/End: Complemental strand, 8171 - 8083
Alignment:
Q  444 atgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgatcttttttattaaaaga 533  Q
    |||||||||||||| ||||||||| || |||| | |||||||  |||||||  |||||||||||||||||||||  ||||| ||||||||    
T  8171 atgtctatggtggatcaaccttaagag-ggtccatcatagattatattaattattttaatttaaaccgtttgattgttttttttaaaaga 8083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 444 - 521
Target Start/End: Original strand, 21262 - 21339
Alignment:
Q  444 atgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgatcttt 521  Q
    |||||||||||||||||||||| | ||||||| ||||||||    |||||| |||| ||||| |||||||||||||||    
T  21262 atgtctatggtggaccaaccttcagagtggtccaccatagacttcattaattttttaaattttaaccgtttgatcttt 21339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 448 - 517
Target Start/End: Original strand, 22119 - 22188
Alignment:
Q  448 ctatggtggaccaaccttaaaagtggtctaccatagatcctattaatatttttaatttaaaccgtttgat 517  Q
    ||||||||||||||| ||  | |||||| |||||||| ||||||||| | ||||||||||||| ||||||    
T  22119 ctatggtggaccaacattgtaggtggtccaccatagaccctattaatttctttaatttaaaccatttgat 22188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1178 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold1178
Description:

Target: scaffold1178; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 43 - 115
Target Start/End: Complemental strand, 846 - 774
Alignment:
Q  43 catatctctcataaacatccatgaatggggatcaagcttgatgaaagatgtcaaatcaaagaaaaaggtcttc 115  Q
    ||||| |||||||||||| |||||||| |||||||| |||||| ||||  | |||| |||| |||||||||||    
T  846 catatgtctcataaacattcatgaatgaggatcaagtttgatggaagagatgaaattaaaggaaaaggtcttc 774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1152 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold1152
Description:

Target: scaffold1152; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 409 - 494
Target Start/End: Complemental strand, 2492 - 2407
Alignment:
Q  409 ccaaataaat-ccgacggttaaatttaactcaaatgatgtctatggtggaccaaccttaaaagtggtctaccatagatcctattaat 494  Q
    |||||||||| ||||| ||||| |||||||| ||  ||||  |||||||||||||||||||||||||||| | |||| | |||||||    
T  2492 ccaaataaattccgactgttaactttaactccaaatatgta-atggtggaccaaccttaaaagtggtctatcgtagaccttattaat 2407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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