View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19175_high_111 (Length: 252)
Name: NF19175_high_111
Description: NF19175
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19175_high_111 |
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Alignment Details
Target: chr1 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 10 - 234
Target Start/End: Complemental strand, 4401095 - 4400873
Alignment:
| Q |
10 |
ccaagaatataagagagttatatatgaacttttctagccatatattttcacacttcacatgtttctcaaggttgatcacaaagtcatcacgagattttct |
109 |
Q |
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| T |
4401095 |
ccaataatataagagagttatatatgaacttttctagccatatattttcacacttcacatgtttctcaaggttgatcccaaagtcatcacgagattttct |
4400996 |
T |
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| Q |
110 |
cagttcttgtttctccaattgccgttgaattaattaagggtttgacatttatttaagccatatacaaaaatatgcttttattttaactcaactaccatca |
209 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
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| T |
4400995 |
cagttcttgtttctccaattgccgttgaattaattaagggtttgacatttatttaagcc--atacaaaaatatgcttttattttaactcaactaccatca |
4400898 |
T |
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| Q |
210 |
tccacccacggttgacacaaaatag |
234 |
Q |
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||||||||||||||||||||||||| |
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| T |
4400897 |
tccacccacggttgacacaaaatag |
4400873 |
T |
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