View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19175_high_26 (Length: 532)

Name: NF19175_high_26
Description: NF19175
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19175_high_26
NF19175_high_26
[»] chr4 (23 HSPs)
chr4 (1-514)||(21332172-21332685)
chr4 (1-273)||(10985583-10985854)
chr4 (1-266)||(12885339-12885603)
chr4 (19-276)||(16396132-16396389)
chr4 (1-276)||(3268393-3268668)
chr4 (1-273)||(25239753-25240025)
chr4 (1-275)||(12217620-12217887)
chr4 (1-273)||(13861372-13861644)
chr4 (1-170)||(3270605-3270774)
chr4 (5-276)||(45313209-45313479)
chr4 (1-227)||(17282405-17282631)
chr4 (5-259)||(9901585-9901838)
chr4 (8-273)||(26780684-26780949)
chr4 (5-276)||(8082107-8082378)
chr4 (92-276)||(18284481-18284665)
chr4 (5-274)||(28891971-28892244)
chr4 (5-162)||(49402755-49402914)
chr4 (112-250)||(26778756-26778894)
chr4 (5-135)||(15455503-15455633)
chr4 (194-259)||(8168007-8168072)
chr4 (52-259)||(15427790-15427994)
chr4 (52-259)||(15434408-15434612)
chr4 (5-85)||(34845514-34845594)
[»] chr8 (19 HSPs)
chr8 (1-266)||(18573893-18574158)
chr8 (1-272)||(32008884-32009154)
chr8 (1-273)||(18040357-18040622)
chr8 (3-273)||(7999711-7999979)
chr8 (1-273)||(41280677-41280950)
chr8 (10-228)||(24033833-24034051)
chr8 (1-242)||(2085642-2085883)
chr8 (1-273)||(7454521-7454807)
chr8 (1-276)||(25820775-25821050)
chr8 (105-249)||(17775783-17775926)
chr8 (5-274)||(22609362-22609631)
chr8 (5-272)||(24060621-24060888)
chr8 (69-276)||(33273388-33273595)
chr8 (5-136)||(11709431-11709562)
chr8 (1-130)||(10532801-10532930)
chr8 (171-276)||(11709609-11709714)
chr8 (82-249)||(10532633-10532800)
chr8 (21-85)||(22282161-22282225)
chr8 (1-33)||(33273615-33273647)
[»] chr1 (13 HSPs)
chr1 (1-271)||(19441982-19442251)
chr1 (1-273)||(19967288-19967559)
chr1 (1-275)||(24973754-24974027)
chr1 (1-273)||(9859026-9859302)
chr1 (1-276)||(8995305-8995578)
chr1 (1-276)||(21817598-21817879)
chr1 (5-259)||(38621866-38622120)
chr1 (89-275)||(21815423-21815609)
chr1 (1-237)||(8990666-8990902)
chr1 (48-259)||(49472311-49472519)
chr1 (1-83)||(22186045-22186127)
chr1 (75-273)||(33028926-33029124)
chr1 (1-46)||(21815619-21815664)
[»] chr2 (13 HSPs)
chr2 (1-275)||(3770319-3770593)
chr2 (1-273)||(25133793-25134074)
chr2 (1-273)||(23755687-23755959)
chr2 (1-259)||(26154865-26155123)
chr2 (1-273)||(41266065-41266336)
chr2 (1-228)||(42534036-42534263)
chr2 (1-273)||(3105263-3105535)
chr2 (5-273)||(27347232-27347499)
chr2 (5-243)||(19092784-19093021)
chr2 (8-159)||(23929863-23930014)
chr2 (2-135)||(29568375-29568507)
chr2 (171-273)||(23932908-23933010)
chr2 (213-276)||(26159093-26159156)
[»] chr3 (7 HSPs)
chr3 (13-260)||(19790346-19790593)
chr3 (1-259)||(22915111-22915367)
chr3 (1-273)||(16852878-16853149)
chr3 (18-275)||(44635823-44636081)
chr3 (5-244)||(16914769-16915008)
chr3 (57-257)||(3559006-3559204)
chr3 (69-245)||(13016461-13016636)
[»] scaffold0170 (1 HSPs)
scaffold0170 (1-276)||(16182-16456)
[»] scaffold0002 (2 HSPs)
scaffold0002 (1-273)||(391518-391791)
scaffold0002 (1-276)||(380820-381095)
[»] chr7 (18 HSPs)
chr7 (1-260)||(20093595-20093853)
chr7 (1-249)||(29164908-29165155)
chr7 (1-273)||(30770057-30770327)
chr7 (1-273)||(18153187-18153459)
chr7 (1-262)||(47295562-47295822)
chr7 (1-273)||(22705658-22705929)
chr7 (3-276)||(9548825-9549107)
chr7 (1-259)||(7595408-7595670)
chr7 (1-249)||(21802509-21802757)
chr7 (1-273)||(21592744-21593018)
chr7 (5-276)||(2249857-2250128)
chr7 (5-259)||(38612620-38612874)
chr7 (8-243)||(30764879-30765114)
chr7 (76-276)||(21801711-21801911)
chr7 (12-147)||(18185694-18185829)
chr7 (18-91)||(28794078-28794151)
chr7 (1-47)||(22703955-22704001)
chr7 (179-259)||(40635520-40635598)
[»] chr6 (29 HSPs)
chr6 (1-273)||(29094885-29095158)
chr6 (1-273)||(23574453-23574724)
chr6 (1-273)||(15119590-15119861)
chr6 (1-276)||(18736059-18736334)
chr6 (1-273)||(4409255-4409528)
chr6 (1-273)||(8306119-8306390)
chr6 (5-275)||(14910669-14910938)
chr6 (1-260)||(29482650-29482909)
chr6 (19-275)||(17756884-17757140)
chr6 (5-275)||(15349494-15349765)
chr6 (1-260)||(18728980-18729239)
chr6 (64-273)||(21508507-21508716)
chr6 (1-207)||(12738554-12738760)
chr6 (5-157)||(7968479-7968631)
chr6 (1-228)||(24438474-24438702)
chr6 (1-244)||(18258492-18258735)
chr6 (5-266)||(18014333-18014594)
chr6 (5-273)||(15369492-15369761)
chr6 (1-141)||(19860052-19860192)
chr6 (179-271)||(19857705-19857797)
chr6 (5-275)||(3876381-3876651)
chr6 (5-131)||(15318989-15319115)
chr6 (170-276)||(23524248-23524354)
chr6 (169-271)||(18043505-18043607)
chr6 (6-116)||(23524128-23524238)
chr6 (180-260)||(27964962-27965042)
chr6 (1-74)||(18043399-18043472)
chr6 (176-275)||(15318845-15318943)
chr6 (100-161)||(14467175-14467236)
[»] chr5 (20 HSPs)
chr5 (1-259)||(23495407-23495664)
chr5 (1-273)||(28067893-28068164)
chr5 (1-260)||(5931249-5931508)
chr5 (1-276)||(20899462-20899737)
chr5 (1-258)||(36712534-36712790)
chr5 (1-273)||(8244570-8244846)
chr5 (1-266)||(33622367-33622634)
chr5 (2-260)||(41037527-41037785)
chr5 (1-227)||(5590612-5590838)
chr5 (1-259)||(15620075-15620332)
chr5 (4-161)||(42792543-42792700)
chr5 (58-273)||(22510097-22510312)
chr5 (1-273)||(38608326-38608608)
chr5 (73-273)||(13537860-13538060)
chr5 (14-250)||(19329816-19330052)
chr5 (1-135)||(22922645-22922779)
chr5 (1-133)||(22922050-22922182)
chr5 (93-276)||(24095343-24095526)
chr5 (54-83)||(31393167-31393196)
chr5 (231-259)||(5589324-5589352)
[»] scaffold0150 (1 HSPs)
scaffold0150 (1-276)||(29923-30198)
[»] scaffold0280 (1 HSPs)
scaffold0280 (1-274)||(908-1181)
[»] scaffold0083 (1 HSPs)
scaffold0083 (1-273)||(4065-4337)
[»] scaffold0026 (1 HSPs)
scaffold0026 (1-276)||(151157-151431)
[»] scaffold0008 (2 HSPs)
scaffold0008 (5-265)||(242736-242996)
scaffold0008 (5-260)||(253376-253631)
[»] scaffold0096 (1 HSPs)
scaffold0096 (1-273)||(10741-11013)
[»] scaffold0362 (1 HSPs)
scaffold0362 (1-258)||(7233-7490)
[»] scaffold0042 (2 HSPs)
scaffold0042 (1-276)||(68732-69007)
scaffold0042 (1-142)||(74904-75045)
[»] scaffold0989 (1 HSPs)
scaffold0989 (1-221)||(1444-1662)
[»] scaffold0084 (1 HSPs)
scaffold0084 (1-275)||(54471-54744)
[»] scaffold0034 (2 HSPs)
scaffold0034 (1-161)||(47396-47556)
scaffold0034 (171-276)||(56224-56329)
[»] scaffold0058 (4 HSPs)
scaffold0058 (1-195)||(1667-1861)
scaffold0058 (1-94)||(15424-15517)
scaffold0058 (162-246)||(15520-15603)
scaffold0058 (217-266)||(15692-15741)
[»] scaffold0192 (1 HSPs)
scaffold0192 (5-273)||(12386-12651)
[»] scaffold0265 (3 HSPs)
scaffold0265 (1-276)||(14930-15211)
scaffold0265 (89-275)||(17200-17386)
scaffold0265 (1-46)||(17145-17190)
[»] scaffold0013 (1 HSPs)
scaffold0013 (5-273)||(37095-37362)
[»] scaffold0483 (1 HSPs)
scaffold0483 (51-249)||(9243-9437)
[»] scaffold0111 (1 HSPs)
scaffold0111 (5-276)||(2694-2967)
[»] scaffold1272 (1 HSPs)
scaffold1272 (167-273)||(1968-2074)
[»] scaffold0063 (1 HSPs)
scaffold0063 (5-258)||(36664-36916)
[»] scaffold0011 (1 HSPs)
scaffold0011 (1-273)||(20154-20425)
[»] scaffold0321 (1 HSPs)
scaffold0321 (193-275)||(18227-18309)
[»] scaffold0233 (1 HSPs)
scaffold0233 (53-135)||(15998-16082)
[»] scaffold0299 (1 HSPs)
scaffold0299 (1-29)||(19209-19237)


Alignment Details
Target: chr4 (Bit Score: 430; Significance: 0; HSPs: 23)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 430; E-Value: 0
Query Start/End: Original strand, 1 - 514
Target Start/End: Complemental strand, 21332685 - 21332172
Alignment:
Q  1 tatttatagaggtggagggctgcagagccgttgcggtggcacacctgactctggcggttacgaaatcatgggaagtgtaaccgccagagagtttattgtg 100  Q
    |||||| ||||||||||||||||||||||||||  |||||||||||| |||||||| ||||||||||||||||||| ||||||||||| |||||||||||    
T  21332685 tatttacagaggtggagggctgcagagccgttgtagtggcacacctggctctggcgcttacgaaatcatgggaagtataaccgccagaaagtttattgtg 21332586  T
Q  101 ggaacgtgcaaagagacgttatggttcgtttgaaccagtctctttcgctctgtgcacccccttgtgtggaaaggagtgtgtcgcaagtaactttgccaaa 200  Q
    |||||||| | ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  21332585 ggaacgtgtagagagacgttgtggttcgtttgaaccagtctctttcgctctgtgcacccccttgtgtggaaaggggtgtgtcgcaagtaactttgccaaa 21332486  T
Q  201 cgtggtgtttgagctttggattgtattgaacctaagtaaatgggccaaagatccttttggtcggtcgagaacagtacccatcaatatcaaactatcaaat 300  Q
    ||| |||||||  ||||| ||||||||| |||||||||||||||||||||||| |||||| || || |||||||||||||||||||||||||||||||||    
T  21332485 cgtagtgtttggactttgaattgtattggacctaagtaaatgggccaaagatcattttggccgatctagaacagtacccatcaatatcaaactatcaaat 21332386  T
Q  301 tgacatcaaatcaaattgttaagacatctaaatatgtacccctacttccacgccatatttggtagctcaaaataagatactccatgaacttgtgatttgc 400  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21332385 tgacatcaaatcaaattgttaagacatctaaatatgtacccctacttccacgccatatttggtagctcaaaataagatactccatgaacttgtgatttgc 21332286  T
Q  401 acgcatgtattggggaaaaaagaggaaaatctaacaatagtcatagagcaaaagtcaacaaatatttgatctccctaagtaattgacgtgcatctcgtga 500  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21332285 acgcatgtattgggaaaaaaagaggaaaatctaacaatagtcatagagcaaaagtcaacaaatatttgatctccctaagtaattgacgtgcatctcgtga 21332186  T
Q  501 gtaaagtaaatttt 514  Q
    ||||||||||||||    
T  21332185 gtaaagtaaatttt 21332172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 273
Target Start/End: Complemental strand, 10985854 - 10985583
Alignment:
Q  1 tatttatagaggtggagggctgcagagccgttgcggtggcacacctgactctggcggttacgaaatcatgggaagtgtaaccgccagagagtttattgtg 100  Q
    |||||||||||||||| ||||||||||||||||   ||||||||||| |||| |||||||||||||| |||||||||||||||||||||||||||||| |    
T  10985854 tatttatagaggtggatggctgcagagccgttgtaatggcacacctggctctcgcggttacgaaatcgtgggaagtgtaaccgccagagagtttattgcg 10985755  T
Q  101 ggaacgtgcaaagagacgttatggttcgtttgaaccagtctctttcgctctgtgcacccccttgtgtggaaaggagtgtgtcgcaagtaactttgccaaa 200  Q
    |||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| ||||||| ||||||| |||||||||||||||||    
T  10985754 ggaacgtgcagagagacgttgtggttcgtttgaaccagtctcgttcgctctgtgcacccccttgtggggaaagg-gtgtgtcacaagtaactttgccaaa 10985656  T
Q  201 cgtggtgtttgagctttggattgtattgaacctaagtaaatgggccaaagatccttttggtcggtcgagaaca 273  Q
    |||||||||||| |||||||||||||||  |||||||||||||||||||| ||||||||  ||||| ||||||    
T  10985655 cgtggtgtttgacctttggattgtattgggcctaagtaaatgggccaaaggtccttttgcccggtccagaaca 10985583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 1 - 266
Target Start/End: Original strand, 12885339 - 12885603
Alignment:
Q  1 tatttatagaggtggagggctgcagagccgttgcggtggcacacctgactctggcggttacgaaatcatgggaagtgtaaccgccagagagtttattgtg 100  Q
    |||||||| |||||||||||||||||||| |||   ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| |    
T  12885339 tatttataaaggtggagggctgcagagccattgtaatggcacacctggctctggcggttacgaaatcgtgggaagtgtaaccgccagagagtttattgcg 12885438  T
Q  101 ggaacgtgcaaagagacgttatggttcgtttgaaccagtctctttcgctctgtgcacccccttgtgtggaaaggagtgtgtcgcaagtaactttgccaaa 200  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||  |||||||||||| | || |||| || ||| ||||||||||||||||||    
T  12885439 ggaacgtgcaaagagacgttgtggttcgtttgaaccagtctctttcgctccatgcacccccttgcg-gggaaggggtatgttgcaagtaactttgccaaa 12885537  T
Q  201 cgtggtgtttgagctttggattgtattgaacctaagtaaatgggccaaagatccttttggtcggtc 266  Q
    ||||||||||| | ||||||||||||||  |||||||||||||| ||||  ||||||||| |||||    
T  12885538 cgtggtgtttgggttttggattgtattgggcctaagtaaatgggtcaaaagtccttttggccggtc 12885603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 19 - 276
Target Start/End: Complemental strand, 16396389 - 16396132
Alignment:
Q  19 gctgcagagccgttgcggtggcacacctgactctggcggttacgaaatcatgggaagtgtaaccgccagagagtttattgtgggaacgtgcaaagagacg 118  Q
    |||||||||||||||  ||||||||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||| ||||||||| | |||||||    
T  16396389 gctgcagagccgttgtagtggcacacctgactctggcgattaggaaatcatgggaagtgtaaccgccagagtgtttattgcgggaacgtgtagagagacg 16396290  T
Q  119 ttatggttcgtttgaaccagtctctttcgctctgtgca-cccccttgtgtggaaaggagtgtgtcgcaagtaactttgccaaacgtggtgtttgagcttt 217  Q
    || ||||||| |||||||||||||  | |||| ||||| |||||||||| ||||||| |||||||||||||||||||||||||||||||||||  |||||    
T  16396289 ttgtggttcgcttgaaccagtctcgcttgctccgtgcaccccccttgtg-ggaaaggggtgtgtcgcaagtaactttgccaaacgtggtgttttggcttt 16396191  T
Q  218 ggattgtattgaacctaagtaaatgggccaaagatccttttggtcggtcgagaacagta 276  Q
    |||||||||||  |||||||||||||||||||||||||||||| ||||| |||||||||    
T  16396190 ggattgtattgggcctaagtaaatgggccaaagatccttttggccggtccagaacagta 16396132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 1 - 276
Target Start/End: Original strand, 3268393 - 3268668
Alignment:
Q  1 tatttatagaggtggagggctgcagagccgttgcggtggcacacctgactctggcggttacgaaatcatgggaagtgtaaccgccagagagtttattgtg 100  Q
    ||||||||||||||||||||||||||||| |||   || |||||||| |||||||||||||| |||| |||||||||||||||||| ||||||||||| |    
T  3268393 tatttatagaggtggagggctgcagagccattgtaatgacacacctggctctggcggttacgtaatcgtgggaagtgtaaccgccatagagtttattgcg 3268492  T
Q  101 ggaacgtgcaaagagacgttatggttcgtttgaaccagtctctttcgctctgtgca-cccccttgtgtggaaaggagtgtgtcgcaagtaactttgccaa 199  Q
    |||||||||| ||||||||| |||||||||||||||||||||| |||||| ||||| ||||||||||||| |||| ||||||| ||||||| ||||||||    
T  3268493 ggaacgtgcagagagacgttgtggttcgtttgaaccagtctctgtcgctccgtgcaccccccttgtgtgg-aaggggtgtgtcacaagtaattttgccaa 3268591  T
Q  200 acgtggtgtttgagctttggattgtattgaacctaagtaaatgggccaaagatccttttggtcggtcgagaacagta 276  Q
    |   |||||||| ||| |||||||| |||| |||||||||||||||||||| ||||||||| |||||  ||||||||    
T  3268592 aatcggtgtttgggctgtggattgttttgagcctaagtaaatgggccaaaggtccttttggccggtcccgaacagta 3268668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 138; E-Value: 7e-72
Query Start/End: Original strand, 1 - 273
Target Start/End: Original strand, 25239753 - 25240025
Alignment:
Q  1 tatttatagaggtggagggctgcagagccgttgcggtggcacacctgactctggcggttacgaaatcatgggaagtgtaaccgccagagagtttattgtg 100  Q
    |||||||||||||||||||||||||||||||||   |||||||||| |||||| ||||||||||||  ||||||||||||||||| | |||||||||| |    
T  25239753 tatttatagaggtggagggctgcagagccgttgtaatggcacaccttactctgacggttacgaaattgtgggaagtgtaaccgcctgtgagtttattgcg 25239852  T
Q  101 ggaacgtgcaaagagacgttatggttcgtttgaaccagtctctttcgctctgtgcaccccctt-gtgtggaaaggagtgtgtcgcaagtaactttgccaa 199  Q
    |||||||| |||||||| ||  ||||||||||||||||||||||||| || |||||||||| | | ||| ||||  ||||||||| ||||| |||| |||    
T  25239853 ggaacgtggaaagagactttggggttcgtttgaaccagtctctttcgttccgtgcacccccctcgcgtg-aaagaggtgtgtcgcgagtaattttgtcaa 25239951  T
Q  200 acgtggtgtttgagctttggattgtattgaacctaagtaaatgggccaaagatccttttggtcggtcgagaaca 273  Q
    |||||||||||  |||||||| |||||||  |||||||||||||||||||||||||||||| ||||| ||||||    
T  25239952 acgtggtgtttaggctttggagtgtattgggcctaagtaaatgggccaaagatccttttggccggtccagaaca 25240025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 1 - 275
Target Start/End: Original strand, 12217620 - 12217887
Alignment:
Q  1 tatttatagaggtggagggctgcagagccgttgcggtggcacacctgactctggcggttacgaaatcatgggaagtgtaaccgccagagagtttattgtg 100  Q
    |||||||||||||||||||||||||||||||||       | ||||| ||||||||||||||||||| | ||||||||||||||||||||||||||||      
T  12217620 tatttatagaggtggagggctgcagagccgttgt------aaacctggctctggcggttacgaaatcgtaggaagtgtaaccgccagagagtttattgca 12217713  T
Q  101 ggaacgtgcaaagagacgttatggttcgtttgaaccagtctctttcgctctgtgcacccccttgtgtggaaaggagtgtgtcgcaagtaactttgccaaa 200  Q
    |||||||||| ||||||||| |||||||||||||||||||||| |||||| |||||||||| ||||||| |||| |||||| |||||||| ||||| |||    
T  12217714 ggaacgtgcagagagacgttgtggttcgtttgaaccagtctctgtcgctccgtgcacccccatgtgtgg-aaggggtgtgttgcaagtaattttgctaaa 12217812  T
Q  201 cgtggtgtttgagctttggattgtattgaacctaagtaaatgggccaaagatccttttggtcggtcgagaacagt 275  Q
    || |||||||| ||| |||||||||||    ||||||||||||||||||| ||||||||| | ||| ||||||||    
T  12217813 cgcggtgtttgggctgtggattgtattaggactaagtaaatgggccaaaggtccttttggccagtccagaacagt 12217887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 1 - 273
Target Start/End: Original strand, 13861372 - 13861644
Alignment:
Q  1 tatttatagaggtggagggctgcagagccgttgcggtggcacacctgactctggcggttacgaaatcatgggaagtgtaaccgccagagagtttattgtg 100  Q
    |||||||||||||||||||||||| ||||||||   |||||||||| |||||  | ||||||||||| ||||||||||||| ||| | |||||||||| |    
T  13861372 tatttatagaggtggagggctgcaaagccgttgtaatggcacaccttactctaacagttacgaaatcgtgggaagtgtaactgcctgtgagtttattgcg 13861471  T
Q  101 ggaacgtgcaaagagacgttatggttcgtttgaaccagtctctttcgctctgtgca-cccccttgtgtggaaaggagtgtgtcgcaagtaactttgccaa 199  Q
    |||||||| |||||||||||  |||||||||||||| || ||||||| || ||||| |||||| | |||| |||| ||||||||| ||||| ||| |||     
T  13861472 ggaacgtggaaagagacgttggggttcgtttgaaccggtatctttcgttccgtgcacccccctcgcgtgg-aaggggtgtgtcgcgagtaattttaccag 13861570  T
Q  200 acgtggtgtttgagctttggattgtattgaacctaagtaaatgggccaaagatccttttggtcggtcgagaaca 273  Q
    |||||||||||| ||||||||| ||||||  |||||||||||| | ||||||||||||||| ||||| ||||||    
T  13861571 acgtggtgtttgggctttggatggtattgggcctaagtaaatgagtcaaagatccttttggccggtccagaaca 13861644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 3270605 - 3270774
Alignment:
Q  1 tatttatagaggtggagggctgcagagccgttgcggtggcacacctgactctggcggttacgaaatcatgggaagtgtaaccgccagagagtttattgtg 100  Q
    |||||||||||||||||||||||||||||||||   ||||||||||| |||||| |||||||||||| |||||||||||||||| ||||||||||||| |    
T  3270605 tatttatagaggtggagggctgcagagccgttgtaatggcacacctggctctggtggttacgaaatcgtgggaagtgtaaccgctagagagtttattgcg 3270704  T
Q  101 ggaacgtgcaaagagacgttatggttcgtttgaaccagtctctttcgctctgtgcacccccttgtgtgga 170  Q
    |||||||| |  |||||||| |||||||||||||||||||||| | |||| |||||||||||||||||||    
T  3270705 ggaacgtgtagtgagacgttgtggttcgtttgaaccagtctctgttgctccgtgcacccccttgtgtgga 3270774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 5 - 276
Target Start/End: Original strand, 45313209 - 45313479
Alignment:
Q  5 tatagaggtggagggctgcagagccgttgcggtggcacacctgactctggcggttacgaaatcatgggaagtgtaaccgccagagagtttattgtgggaa 104  Q
    ||||||||| ||||| |||| | ||||||   ||||||||| | ||||||||||||||||||| ||||||||||||||||||||||| |||||| |||||    
T  45313209 tatagaggtagagggttgcaaatccgttgtaatggcacaccaggctctggcggttacgaaatcgtgggaagtgtaaccgccagagagattattg-gggaa 45313307  T
Q  105 cgtgcaaagagacgttatggttcgtttgaaccagtctct-ttcgctctgtgcacccccttgtgtggaaaggagtgtgtcgcaagtaactttgccaaacgt 203  Q
    |||||| ||||||||| | |||||||||||||||||| |  |||||| |||||||| || | | |  |||| |||||||||||||||  ||||||||| |    
T  45313308 cgtgcagagagacgttgtagttcgtttgaaccagtctttgctcgctccgtgcaccctctcgcg-gagaaggggtgtgtcgcaagtaatgttgccaaacat 45313406  T
Q  204 ggtgtttgagctttggattgtattgaacctaagtaaatgggccaaagatccttttggtcggtcgagaacagta 276  Q
    |||| ||| |||||| |||||||||  |||||||||||||| ||||| ||||||||| ||||| |||||||||    
T  45313407 ggtgcttgggctttgaattgtattgggcctaagtaaatgggtcaaagttccttttggccggtccagaacagta 45313479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 17282631 - 17282405
Alignment:
Q  1 tatttatagaggtggagggctgcagagccgttgcggtggcacacctgactctggcggttacgaaatcatgggaagtgtaaccgccagagagtttattgtg 100  Q
    |||||||||||||||||||||||||||||||||   |||||||||| |||||| |||||||||| || ||||||||||||||||  | | |||||||| |    
T  17282631 tatttatagaggtggagggctgcagagccgttgtaatggcacaccttactctgacggttacgaattcgtgggaagtgtaaccgcttgtgggtttattgcg 17282532  T
Q  101 ggaacgtgcaaagagacgttatggttcgtttgaaccagtctctttcgctctgtgca-cccccttgtgtggaaaggagtgtgtcgcaagtaactttgccaa 199  Q
    |||||||| |||||||||||  |||||||| |||||||||||||||| || ||||| |||||| | |||| |||| ||||||||| ||||| ||||||||    
T  17282531 ggaacgtggaaagagacgttggggttcgttagaaccagtctctttcgttccgtgcacccccctcgcgtgg-aaggggtgtgtcgcgagtaattttgccaa 17282433  T
Q  200 acgtggtgtttgagctttggattgtatt 227  Q
    ||||||||| || |||||||| ||||||    
T  17282432 acgtggtgtctgggctttggagtgtatt 17282405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 5 - 259
Target Start/End: Complemental strand, 9901838 - 9901585
Alignment:
Q  5 tatagaggtggagggctgcagagccgttgcggtggcacacctgactctggcggttacgaaatcatgggaagtgtaaccgccagagagtttattgtgggaa 104  Q
    ||||||||||||||| |||||||||||||   ||||||||||| ||||| ||||||||||||| ||||| |||||||||| |||||| |||||| |||||    
T  9901838 tatagaggtggagggttgcagagccgttgtaatggcacacctggctctgacggttacgaaatcgtgggacgtgtaaccgctagagagattattgcgggaa 9901739  T
Q  105 cgtgcaaagagacgttatggttcgtttgaaccagtctctttcgctctgtgcacccccttgtgtggaaaggagtgtgtcgcaagtaactttgccaaacgtg 204  Q
     || || ||||||||| |||||| ||||||||  |||   |||||| |||||||||||||   || |||  |||||||||||||||  ||||||||||||    
T  9901738 tgtccagagagacgttgtggttcatttgaaccgatctagctcgctccgtgcacccccttg-cagggaagaggtgtgtcgcaagtaatattgccaaacgtg 9901640  T
Q  205 gtgtttgagctttggattgtattgaacctaagtaaatgggccaaagatccttttg 259  Q
     | |||| ||||| ||||||||||| |||||||||||||||  ||| ||||||||    
T  9901639 atatttgcgcttttgattgtattgagcctaagtaaatgggcataagctccttttg 9901585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 8 - 273
Target Start/End: Complemental strand, 26780949 - 26780684
Alignment:
Q  8 agaggtggagggctgcagagccgttgcggtggcacacctgactctggcggttacgaaatcatgggaagtgtaaccgccagagagtttattgtgggaacgt 107  Q
    ||||||||||||||||||||||||||   || |||||| |||||||| |||||||||| | ||||||||||||||||||||||| |||||| ||||||||    
T  26780949 agaggtggagggctgcagagccgttgtaatgacacaccagactctggtggttacgaaaacgtgggaagtgtaaccgccagagagattattgcgggaacgt 26780850  T
Q  108 gcaaagagacgttatggttcgtttgaaccagtctctttcgctctgtgcacccccttgtgtggaaaggagtgtgtcgcaagtaactttgccaaacgtggtg 207  Q
    ||| ||| ||||| |||||||||||| || | ||  ||| |||  | ||||||| |    |  |||| |||||| ||||||||  |||||||||||||||    
T  26780849 gcagagaaacgttgtggttcgtttgagccggccttgttctctccctacacccccctcacagagaaggggtgtgtagcaagtaatgttgccaaacgtggtg 26780750  T
Q  208 tttgagctttggattgtattgaacctaagtaaatgggccaaagatccttttggtcggtcgagaaca 273  Q
    |||| |||||| || ||||||  |||| ||||||||||||||  ||||||||| ||||| ||||||    
T  26780749 tttgggctttgaatagtattgggcctatgtaaatgggccaaaactccttttggccggtccagaaca 26780684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 5 - 276
Target Start/End: Original strand, 8082107 - 8082378
Alignment:
Q  5 tatagaggtggagggctgcagagccgttgcggtggcacacctgactctggcggttacgaaatcatgggaagtgtaaccgccagagagtttattgtgggaa 104  Q
    |||||||||||||| |||||||||| |||   |||||||||||  ||   | ||||||||||| ||| ||||||||||||||||||  | |||| |||||    
T  8082107 tatagaggtggaggactgcagagccattgtaatggcacacctgggtccaacagttacgaaatcgtggaaagtgtaaccgccagagaaataattgcgggaa 8082206  T
Q  105 cgtgcaaagagacgttatggttcgtttgaaccagtctctttcgctctgtgcacccccttgtgtggaaaggagtgtgtcgcaagtaactttgccaaacgtg 204  Q
    |||||||| ||| ||||||| ||||||||||| |||    | |||| ||||||||||||    | ||||| ||  |||||||||||  |||| |||||||    
T  8082207 cgtgcaaatagatgttatggctcgtttgaaccggtcctgcttgctccgtgcacccccttcgcggaaaaggggtaagtcgcaagtaatgttgcaaaacgtg 8082306  T
Q  205 gtgtttgagctttggattgtattgaacctaagtaaatgggccaaagatccttttggtcggtcgagaacagta 276  Q
    ||||||| ||||||||||||||||  ||||||| |||||||| ||||||||||||| ||||| |||||||||    
T  8082307 gtgtttgggctttggattgtattgggcctaagtgaatgggcctaagatccttttggacggtccagaacagta 8082378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 92 - 276
Target Start/End: Complemental strand, 18284665 - 18284481
Alignment:
Q  92 tttattgtgggaacgtgcaaagagacgttatggttcgtttgaaccagtctctttcgctctgtgcac-ccccttgtgtggaaaggagtgtgtcgcaagtaa 190  Q
    ||||||||||||||||  ||| |||||||  ||||||||||| ||||||||||||  | ||||||| ||||| | |||||| || ||||||||  |||||    
T  18284665 tttattgtgggaacgttaaaaaagacgttggggttcgtttgacccagtctctttcattttgtgcactcccctcgcgtggaaggg-gtgtgtcgtgagtaa 18284567  T
Q  191 ctttgccaaacgtggtgtttgagctttggattgtattgaacctaagtaaatgggccaaagatccttttggtcggtcgagaacagta 276  Q
     ||||||||||||| |||||| ||||||||| ||||||  ||||| |||||||||||||||||||||||| ||||| | |||||||    
T  18284566 ttttgccaaacgtgatgtttgggctttggatggtattgggcctaattaaatgggccaaagatccttttggccggtccataacagta 18284481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 5 - 274
Target Start/End: Original strand, 28891971 - 28892244
Alignment:
Q  5 tatagaggtggagggctgcagagccgttgcggtggcacacctgactc----tggcggttacgaaatcatgggaagtgtaaccgccagagagtttattgtg 100  Q
    ||||||||||||| |||||| ||||||||   ||||||| |||  ||    |||| ||| ||||||| |||||||||||||| |||||||  | ||||||    
T  28891971 tatagaggtggagagctgcatagccgttgtaatggcacatctgggtccggttggcagttgcgaaatcgtgggaagtgtaaccaccagagaaataattgtg 28892070  T
Q  101 ggaacgtgcaaagagacgttatggttcgtttgaaccagtctctttcgctctgtgcacccccttgtgtgga-aaggagtgtgtcgcaagtaactttgccaa 199  Q
    | |||||||||||||||||| ||||||||||||||  ||||   | |||| |||||| |||||  | ||| |||| || ||||||||||||  ||| |||    
T  28892071 gaaacgtgcaaagagacgttgtggttcgtttgaacaggtcttgcttgctccgtgcactccctt-cgcggagaaggggtatgtcgcaagtaatgttggcaa 28892169  T
Q  200 acgtggtgtttgagctttggattgtattgaacctaagtaaatgggccaaagatccttttggtcggtcgagaacag 274  Q
    ||||||||||||| |||| ||||||||||  ||||| ||||||| || ||||||||||||  ||||| |||||||    
T  28892170 acgtggtgtttgaactttagattgtattgggcctaaataaatggacctaagatccttttgaccggtccagaacag 28892244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 5 - 162
Target Start/End: Original strand, 49402755 - 49402914
Alignment:
Q  5 tatagaggtggagggctgcagagccgttgcggtggcacacctgactctggcggttacgaaatcatgggaagtgtaaccgccagagagtttattgtgggaa 104  Q
    |||||||||||||||||||||||||||||   ||||||||| | ||||||||||||||| ||| ||| |||||||||||||| |||| |||||| || ||    
T  49402755 tatagaggtggagggctgcagagccgttgtaatggcacaccaggctctggcggttacgagatcgtggaaagtgtaaccgccatagagattattgcggaaa 49402854  T
Q  105 cgtgc--aaagagacgttatggttcgtttgaaccagtctctttcgctctgtgcaccccct 162  Q
    |||||  | ||||||||| | || |||||||||| ||||   | ||||||||||||||||    
T  49402855 cgtgcagagagagacgttgtagtccgtttgaaccggtcttgcttgctctgtgcaccccct 49402914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 112 - 250
Target Start/End: Complemental strand, 26778894 - 26778756
Alignment:
Q  112 agagacgttatggttcgtttgaaccagtctctttcgctctgtgcacccccttgtgtgga-aaggagtgtgtcgcaagtaactttgccaaacgtggtgttt 210  Q
    ||||||||| ||||||||||||||| ||||  |||||| ||||||||||| |  | ||| |||| ||| |||||||||||  ||| ||||| ||||||||    
T  26778894 agagacgttgtggttcgtttgaaccggtcttgttcgctatgtgcacccccctc-gcggagaaggggtgggtcgcaagtaatgttgtcaaacatggtgttt 26778796  T
Q  211 gagctttggattgtattgaacctaagtaaatgggccaaag 250  Q
    |||||||| || ||||||| |||||||||||| |||||||    
T  26778795 gagctttgaatagtattgagcctaagtaaatgagccaaag 26778756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 5 - 135
Target Start/End: Original strand, 15455503 - 15455633
Alignment:
Q  5 tatagaggtggagggctgcagagccgttgcggtggcacacctgactctggcggttacgaaatcatgggaagtgtaaccgccagagagtttattgtgggaa 104  Q
    ||||||||||||||| |||| || ||||| |  ||||||||||  | ||||||||| ||||| ||||||||||||| ||| |||||  | ||||  | ||    
T  15455503 tatagaggtggagggatgcaaagtcgttgtgaaggcacacctgtgtttggcggttatgaaataatgggaagtgtaaacgcaagagaaataattgcagaaa 15455602  T
Q  105 cgtgcaaagagacgttatggttcgtttgaac 135  Q
    |||||||||||||||| ||| ||||||||||    
T  15455603 cgtgcaaagagacgttgtggctcgtttgaac 15455633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 194 - 259
Target Start/End: Original strand, 8168007 - 8168072
Alignment:
Q  194 tgccaaacgtggtgtttgagctttggattgtattgaacctaagtaaatgggccaaagatccttttg 259  Q
    |||||||| ||||||||| |||||||||||||||| ||||||||||||||| ||||  ||||||||    
T  8168007 tgccaaacatggtgtttgggctttggattgtattggacctaagtaaatgggtcaaaactccttttg 8168072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 52 - 259
Target Start/End: Original strand, 15427790 - 15427994
Alignment:
Q  52 tggcggttacgaaatcatgggaagtgtaaccgccagagagtttattgtgggaacgtgcaaagagacgttatggttcgtttgaaccagtctctttcgctct 151  Q
    |||||||||||||||  ||| || ||||| ||| |||||  | |||| ||||||||||||||| ||||| ||| ||||  ||||  |||||  | ||||     
T  15427790 tggcggttacgaaatagtgg-aactgtaaacgctagagaaataattgcgggaacgtgcaaagaaacgttgtggctcgtaggaactggtctcgcttgctcc 15427888  T
Q  152 gtgcacccccttgtgtggaaaggagtgtgtcgcaagtaactttgccaaacgtggtgtttgagctttggattgtattgaacctaagtaaatgggccaaaga 251  Q
    ||||||||| ||    ||||||| ||||||||||| |||  |||  ||||||||| | || |||| |||||||||||  |||||||||||||| | ||||    
T  15427889 gtgcacccctttcgcgggaaaggggtgtgtcgcaaataatattgtgaaacgtggtatatg-gctt-ggattgtattgggcctaagtaaatgggtctaaga 15427986  T
Q  252 tccttttg 259  Q
    ||||||||    
T  15427987 tccttttg 15427994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 52 - 259
Target Start/End: Original strand, 15434408 - 15434612
Alignment:
Q  52 tggcggttacgaaatcatgggaagtgtaaccgccagagagtttattgtgggaacgtgcaaagagacgttatggttcgtttgaaccagtctctttcgctct 151  Q
    |||||||||||||||  ||| || ||||| ||| |||||  | |||| ||||||||||||||| ||||| ||| ||||  ||||  |||||  | ||||     
T  15434408 tggcggttacgaaatagtgg-aactgtaaacgctagagaaataattgcgggaacgtgcaaagaaacgttgtggctcgtaggaactggtctcgcttgctcc 15434506  T
Q  152 gtgcacccccttgtgtggaaaggagtgtgtcgcaagtaactttgccaaacgtggtgtttgagctttggattgtattgaacctaagtaaatgggccaaaga 251  Q
    ||||||||| ||    ||||||| ||||||||||| |||  |||  ||||||||| | || |||| |||||||||||  |||||||||||||| | ||||    
T  15434507 gtgcacccctttcgcgggaaaggggtgtgtcgcaaataatattgtgaaacgtggtatatg-gctt-ggattgtattgggcctaagtaaatgggtctaaga 15434604  T
Q  252 tccttttg 259  Q
    ||||||||    
T  15434605 tccttttg 15434612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 5 - 85
Target Start/End: Complemental strand, 34845594 - 34845514
Alignment:
Q  5 tatagaggtggagggctgcagagccgttgcggtggcacacctgactctggcggttacgaaatcatgggaagtgtaaccgcc 85  Q
    |||||||||||  |  ||||||| |||||   |||||||| ||  |||| ||||||||||||| |||||||||||||||||    
T  34845594 tatagaggtgggtgaatgcagagtcgttgtaatggcacacatgtgtctgacggttacgaaatcgtgggaagtgtaaccgcc 34845514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 171; Significance: 1e-91; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 1 - 266
Target Start/End: Complemental strand, 18574158 - 18573893
Alignment:
Q  1 tatttatagaggtggagggctgcagagccgttgcggtggcacacctgactctggcggttacgaaatcatgggaagtgtaaccgccagagagtttattgtg 100  Q
    |||||||||||||||||||||||||||||||||   ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  18574158 tatttatagaggtggagggctgcagagccgttgtaatggcacacctggctctggcggttacgaaatcgtgggaagtgtaaccgccagagagtttattgtg 18574059  T
Q  101 ggaacgtgcaaagagacgttatggttcgtttgaaccagtctctttcgctctgtgca-cccccttgtgtggaaaggagtgtgtcgcaagtaactttgccaa 199  Q
    |||||||||| ||||||||| |||||||||||||||| ||||||| ||||  |||| ||||||||||||||| ||| |||||||||||||||||||||||    
T  18574058 ggaacgtgcagagagacgttgtggttcgtttgaaccactctcttttgctccatgcaccccccttgtgtggaaggga-tgtgtcgcaagtaactttgccaa 18573960  T
Q  200 acgtggtgtttgagctttggattgtattgaacctaagtaaatgggccaaagatccttttggtcggtc 266  Q
    |||||||||||| |||||| ||||||||   ||||||||||||| ||||| |||||||||| |||||    
T  18573959 acgtggtgtttgggctttgcattgtattaggcctaagtaaatggaccaaaaatccttttggccggtc 18573893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 160; E-Value: 5e-85
Query Start/End: Original strand, 1 - 272
Target Start/End: Complemental strand, 32009154 - 32008884
Alignment:
Q  1 tatttatagaggtggagggctgcagagccgttgcggtggcacacctgactctggcggttacgaaatcatgggaagtgtaaccgccagagagtttattgtg 100  Q
    |||||||||||||||||||||| ||||||||||   ||||||||||||||||||||||||||||||| |||||||||||| ||| |||||| |||||| |    
T  32009154 tatttatagaggtggagggctgtagagccgttgtaatggcacacctgactctggcggttacgaaatcgtgggaagtgtaatcgctagagagattattgcg 32009055  T
Q  101 ggaacgtgcaaagagacgttatggttcgtttgaaccagtctctttcgctctgtgcacccccttgtgtggaaaggagtgtgtcgcaagtaactttgccaaa 200  Q
    |||||||||| ||||||| | ||||||||||||||||||||||||||||| ||||||||||||||| || |||| ||||||| |||||||||||| ||||    
T  32009054 ggaacgtgcagagagacgctgtggttcgtttgaaccagtctctttcgctccgtgcacccccttgtgagg-aaggggtgtgtcacaagtaactttgtcaaa 32008956  T
Q  201 cgtggtgtttgagctttggattgtattgaacctaagtaaatgggccaaagatccttttggtcggtcgagaac 272  Q
    ||||||||||| ||||| ||||||||||  |||||||| ||||| ||||| ||||||||| ||||| |||||    
T  32008955 cgtggtgtttgggctttcgattgtattgggcctaagtatatgggtcaaaggtccttttggccggtccagaac 32008884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 1 - 273
Target Start/End: Complemental strand, 18040622 - 18040357
Alignment:
Q  1 tatttatagaggtggagggctgcagagccgttgcggtggcacacctgactctggcggttacgaaatcatgggaagtgtaaccgccagagagtttattgtg 100  Q
    ||||||||||||||||| |||||||||||||||   ||||||||||| ||||| ||||||||||||| |||||||||||||||||| ||||||||||| |    
T  18040622 tatttatagaggtggagagctgcagagccgttgtaatggcacacctggctctgacggttacgaaatcgtgggaagtgtaaccgccatagagtttattgcg 18040523  T
Q  101 ggaacgtgcaaagagacgttatggttcgtttgaaccagtctctttcgctctgtgcaccc-ccttgtgtggaaaggagtgtgtcgcaagtaactttgccaa 199  Q
    |||||||||| ||||||||| ||||||||||||||||||||||||||||| |||||||| |||||||||| |||| ||||||| |||||||||||||       
T  18040522 ggaacgtgcagagagacgttgtggttcgtttgaaccagtctctttcgctccgtgcacccaccttgtgtgg-aaggggtgtgtcacaagtaactttgc--- 18040427  T
Q  200 acgtggtgtttgagctttggattgtattgaacctaagtaaatgggccaaagatccttttggtcggtcgagaaca 273  Q
       ||||||||| |||||||||| |||||  |||||||||||||||||||| ||||||||| ||||| ||||||    
T  18040426 ---tggtgtttgggctttggattatattg-gcctaagtaaatgggccaaaggtccttttggccggtccagaaca 18040357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 3 - 273
Target Start/End: Original strand, 7999711 - 7999979
Alignment:
Q  3 tttatagaggtggagggctgcagagccgttgcggtggcacacctgactctggcggttacgaaatcatgggaagtgtaaccgccagagagtttattgtggg 102  Q
    |||||||||||||||| ||||||  ||||||   || |||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| |||    
T  7999711 tttatagaggtggaggactgcag--ccgttgtaatgacacacctggctctggcggttacgaaatcgtgggaagtgtaaccgccagagagtttattgcggg 7999808  T
Q  103 aacgtgcaaagagacgttatggttcgtttgaaccagtctctttcgctctgtgcac-ccccttgtgtggaaaggagtgtgtcgcaagtaactttgccaaac 201  Q
    ||| |||| ||||||||| ||||||||| |||||||||||| |||||| |||||| | |||||||||| |||| ||||||||||||||| ||||||||||    
T  7999809 aacatgcagagagacgttgtggttcgttggaaccagtctctgtcgctccgtgcactcgccttgtgtgg-aaggggtgtgtcgcaagtaattttgccaaac 7999907  T
Q  202 gtggtgtttgagctttggattgtattgaacctaagtaaatgggccaaagatccttttggtcggtcgagaaca 273  Q
    | |||||| | | | ||||||||||||  |||||||||||||||||||  ||||||||| ||||| ||||||    
T  7999908 gcggtgttcgggttgtggattgtattgggcctaagtaaatgggccaaatgtccttttggccggtccagaaca 7999979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 1 - 273
Target Start/End: Complemental strand, 41280950 - 41280677
Alignment:
Q  1 tatttatagaggtggagggctgcagagccgttgcggtggcacacctgactctggcggttacgaaatcatgggaagtgtaaccgccagagagtttattgtg 100  Q
    |||||||||||||||||| ||||||||||||||   |||||||||||||||||| |||||| ||||| |||||||||||||||||||||||||||||| |    
T  41280950 tatttatagaggtggaggactgcagagccgttgtaatggcacacctgactctgggggttacaaaatcgtgggaagtgtaaccgccagagagtttattgcg 41280851  T
Q  101 ggaacgtgcaaagagacgttatggttcgtttgaaccagtctctttcgctctgtgca--cccccttgtgtggaaaggagtgtgtcgcaagtaactttgcca 198  Q
    |||||||||| |||| |||| ||| ||||||||||| ||||   |||||| |||||  |||||||||| | || || |||||||||||||||  ||||||    
T  41280850 ggaacgtgcagagag-cgttgtggctcgtttgaaccggtcttgctcgctccgtgcacccccccttgtgcgaaagggggtgtgtcgcaagtaatgttgcca 41280752  T
Q  199 aacgtggtgtttgagctttggattgtattgaacctaagtaaatgggccaaagatccttttggtcggtcgagaaca 273  Q
    ||| ||||||||| |||||||||||| |||  |||||||||||||| ||||| ||||||||  ||||| ||||||    
T  41280751 aacatggtgtttgggctttggattgtgttgggcctaagtaaatgggtcaaaggtccttttgtccggtccagaaca 41280677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 10 - 228
Target Start/End: Original strand, 24033833 - 24034051
Alignment:
Q  10 aggtggagggctgcagagccgttgcggtggcacacctgactctggcggttacgaaatcatgggaagtgtaaccgccagagagtttattgtgggaacgtgc 109  Q
    |||||||||| |||||||||||||   |||||||| ||||| |||||||||||||||| ||| |||||||||||||||||||||||||| ||||||||||    
T  24033833 aggtggagggttgcagagccgttgtaatggcacacttgactttggcggttacgaaatcgtggaaagtgtaaccgccagagagtttattgcgggaacgtgc 24033932  T
Q  110 aaagagacgttatggttcgtttgaaccagtctctttcgctctgtgca-cccccttgtgtggaaaggagtgtgtcgcaagtaactttgccaaacgtggtgt 208  Q
    | |||||| || ||||||||||||||||||||| ||  ||| ||||| |||||||||| ||||||| ||||| |||||||||||||||| ||||||||||    
T  24033933 agagagacattgtggttcgtttgaaccagtctcgttttctccgtgcaccccccttgtg-ggaaaggggtgtgacgcaagtaactttgccgaacgtggtgt 24034031  T
Q  209 ttgagctttggattgtattg 228  Q
    ||  | ||||||||||||||    
T  24034032 ttaggatttggattgtattg 24034051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 2085883 - 2085642
Alignment:
Q  1 tatttatagaggtggagggctgcagagccgttgcggtggcacacctgactctggcggttacgaaatcatgggaagtgtaaccgccagagagtttattgtg 100  Q
    |||||||||||||||||||||||||| ||||||   ||||||||||| ||||||||||||||||||| ||||||||||||  |||||   |||||||| |    
T  2085883 tatttatagaggtggagggctgcagaaccgttgtaatggcacacctggctctggcggttacgaaatcgtgggaagtgtaattgccaggtcgtttattgcg 2085784  T
Q  101 ggaacgtgcaaagagacgttatggttcgtttgaaccagtctctttcgctctgtgca-cccccttgtgtggaaaggagtgtgtcgcaagtaactttgccaa 199  Q
    ||||| |||| |||||| || |||||||||||||| |||||||||||||| ||| | ||||||||  ||| |||| |||||| |||||||||||| ||||    
T  2085783 ggaacatgcagagagacattgtggttcgtttgaactagtctctttcgctccgtgtaccccccttgcttgg-aaggggtgtgttgcaagtaacttttccaa 2085685  T
Q  200 acgtggtgtttgagctttggattgtattgaacctaagtaaatg 242  Q
    |||||||||||  |||||| |||| ||||  ||||||||||||    
T  2085684 acgtggtgtttaggctttgaattgcattgggcctaagtaaatg 2085642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 1 - 273
Target Start/End: Complemental strand, 7454807 - 7454521
Alignment:
Q  1 tatttatagaggtggagggctgcagagccgttgcggtggcacacctgactctggcggttacgaaatcatgggaagtgtaaccgccagagagtttattgtg 100  Q
    |||||||||||||||| ||||||||||||||||   ||||||||||| ||||||||||||||||||| ||||||||||||||| || |||||||||||||    
T  7454807 tatttatagaggtggaaggctgcagagccgttgtaatggcacacctggctctggcggttacgaaatcgtgggaagtgtaaccgtcatagagtttattgtg 7454708  T
Q  101 ggaacgtgcaaagagacgttatggttcgtttgaaccagtctctttcgctctgtgca-------------cccccttgtgtgga-aaggagtgtgtcgcaa 186  Q
    |||||||||| ||||||||| ||| |||| |||||| |||||  |||||| |||||             |||||    | ||| |||| |||||| ||||    
T  7454707 ggaacgtgcatagagacgttgtggctcgtatgaaccggtctcgctcgctccgtgcacccccccccccccccccccccggcggagaaggggtgtgttgcaa 7454608  T
Q  187 gtaactttgccaaacgtggtgtttgagctttggattgtattgaacctaagtaaatgggccaaagatccttttggtcggtcgagaaca 273  Q
    |||| |||||||||||||| ||||| |||||||||||| |||  ||||||||||| |||||||||||||||||| ||||| ||||||    
T  7454607 gtaagtttgccaaacgtggagtttgggctttggattgtgttgggcctaagtaaataggccaaagatccttttggccggtccagaaca 7454521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 1 - 276
Target Start/End: Original strand, 25820775 - 25821050
Alignment:
Q  1 tatttatagaggtggagggctgcagagccgttgcggtggcacacctgactctggcggttacgaaatcatgggaagtgtaaccgccagagagtttattgtg 100  Q
    ||||| |||||||||||||||||| ||||||||   |||||||||| |||||| ||||||||||||| ||||||||||||||||| | ||||||||||      
T  25820775 tatttttagaggtggagggctgcaaagccgttgtaatggcacaccttactctgacggttacgaaatcgtgggaagtgtaaccgcctgtgagtttattgct 25820874  T
Q  101 ggaacgtgcaaagagacgttatggttcgtttgaaccagtctctttcgctctgtgcacccccttgtgtggaaaggagtgtgtcgcaagtaactttgccaaa 200  Q
    |||||||| |||||||||||  |||||||||||| | ||  |||||| |  |||||||||| |     | |||| || |||||| ||||| |||||||||    
T  25820875 ggaacgtggaaagagacgttggggttcgtttgaatcggttcctttcgtttcgtgcacccccctcacacggaaggtgtttgtcgcgagtaattttgccaaa 25820974  T
Q  201 cgtggtgtttgagctttggattgtattgaacctaagtaaatgggccaaagatccttttggtcggtcgagaacagta 276  Q
    ||||||||||| ||||||||| |||||   || || ||||| |||||||||||||||||| ||||| |||||||||    
T  25820975 cgtggtgtttgggctttggatggtattcggcccaaataaattggccaaagatccttttggccggtccagaacagta 25821050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 105 - 249
Target Start/End: Original strand, 17775783 - 17775926
Alignment:
Q  105 cgtgcaaagagacgttatggttcgtttgaaccagtctctttcgctctgtgcacccccttgtgtggaaaggagtgtgtcgcaagtaactttgccaaacgtg 204  Q
    |||||| ||||||||| ||||||| ||||||||||||||||||||| || ||||||||||||||||| || |||||||||||||||||||||||||||||    
T  17775783 cgtgcagagagacgttgtggttcgattgaaccagtctctttcgctccgtacacccccttgtgtggaaggg-gtgtgtcgcaagtaactttgccaaacgtg 17775881  T
Q  205 gtgtttgagctttggattgtattgaacctaagtaaatgggccaaa 249  Q
     |||||| |||||||||||||||| ||||| ||||||||||||||    
T  17775882 atgtttgggctttggattgtattggacctaggtaaatgggccaaa 17775926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 5 - 274
Target Start/End: Complemental strand, 22609631 - 22609362
Alignment:
Q  5 tatagaggtggagggctgcagagccgttgcggtgg--cacacctgactctggcggttacgaaatcatgggaagtgtaaccgccagagagtttattgtggg 102  Q
    ||||||||||||||| ||||||| ||||| | |||  |||||||| ||||||||||||||||||| || || ||||||||| |||||||||||||| | |    
T  22609631 tatagaggtggagggttgcagagtcgttgtgatggtacacacctggctctggcggttacgaaatcgtgagatgtgtaaccgacagagagtttattgcgtg 22609532  T
Q  103 aacgtgcaaagagacgttatggttcgtttgaaccagtctctttcgctctgtgcacccccttgtgtggaaaggagtgtgtcgcaagtaactttgccaaacg 202  Q
    ||| |||| |||||  |  |||||||||||||||| ||||  |||||| ||||||||||| |   |||| ||| ||||| |||| |||  ||| |||||     
T  22609531 aacatgcagagagatatcgtggttcgtttgaaccaatctcgctcgctccgtgcaccccctcgcagggaaggga-tgtgttgcaaataatgttgtcaaaca 22609433  T
Q  203 tggtgtttgagctttggattgtattgaacctaagtaaatgggccaaagatccttttggtcggtcgagaacag 274  Q
    ||||||||| |||||||| |||||||  |||||||||||||  ||||||||||||||||||||| |||||||    
T  22609432 tggtgtttgggctttgga-tgtattgggcctaagtaaatggatcaaagatccttttggtcggtccagaacag 22609362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 5 - 272
Target Start/End: Original strand, 24060621 - 24060888
Alignment:
Q  5 tatagaggtggagggctgcagagccgttgcggtggcacacctgactctggcggttacgaaatcatgggaagtgtaaccgccagagagtttattgtgggaa 104  Q
    ||||||||||||||||||||||||||||| | ||||||||| | ||||||||||||| ||||| | ||||||||||| ||||||||| ||||||  ||||    
T  24060621 tatagaggtggagggctgcagagccgttgtgatggcacaccaggctctggcggttacaaaatcgtaggaagtgtaactgccagagagattattgcaggaa 24060720  T
Q  105 cgtgcaaagagacgttatggttcgtttgaaccagtctctttcgctctgtgcacc-cccttgtgtggaaaggagtgtgtcgcaagtaactttgccaaacgt 203  Q
    | |||| ||||| ||| ||||||||| ||||| ||||   | |||| ||||||| |||| | | || |||| |||||||||||||||  || || |||||    
T  24060721 catgcagagagatgttgtggttcgttagaaccggtcttgcttgctccgtgcacctccctcgcg-gggaaggggtgtgtcgcaagtaatgtttcctaacgt 24060819  T
Q  204 ggtgtttgagctttggattgtattgaacctaagtaaatgggccaaagatccttttggtcggtcgagaac 272  Q
    ||| |||   |||||||||||||||  |||||||||||||||||||| ||||||||  ||||| |||||    
T  24060820 ggtatttcgactttggattgtattgggcctaagtaaatgggccaaagctccttttgaccggtccagaac 24060888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 69 - 276
Target Start/End: Complemental strand, 33273595 - 33273388
Alignment:
Q  69 tgggaagtgtaaccgccagagagtttattgtgggaacgtgcaaagagacgttatggttcgtttgaaccagtctctttcgctctgtgcaccccc-ttgtgt 167  Q
    |||||||||||||||||| |||  |||||| ||||||||||| ||||||||| ||| ||||||||||| ||||   ||||||   |||||||| ||| |     
T  33273595 tgggaagtgtaaccgccatagaacttattgcgggaacgtgcagagagacgttgtggctcgtttgaaccggtcttgctcgctcctcgcaccccccttgcg- 33273497  T
Q  168 ggaaaggagtgtgtcgcaagtaactttgccaaacgtggtgtttgagctttggattgtattgaacctaagtaaatgggccaaagatccttttggtcggtcg 267  Q
    ||| | |||||||| |||||||| |||||||||||||||||||| ||||||||| |||||   ||||||||||||||||||||||||||||||||||||     
T  33273496 ggagaagagtgtgttgcaagtaaatttgccaaacgtggtgtttgggctttggatagtattaggcctaagtaaatgggccaaagatccttttggtcggtcc 33273397  T
Q  268 agaacagta 276  Q
    | |||||||    
T  33273396 ataacagta 33273388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 5 - 136
Target Start/End: Original strand, 11709431 - 11709562
Alignment:
Q  5 tatagaggtggagggctgcagagccgttgcggtggcacacctgactctggcggttacgaaatcatgggaagtgtaaccgccagagagtttattgtgggaa 104  Q
    ||||||||||||||| |||||||||||||   ||||||||| | |||||||  |||||||||| ||||||||||||||||||||||| ||||||||||||    
T  11709431 tatagaggtggagggttgcagagccgttgtaatggcacaccaggctctggcatttacgaaatcgtgggaagtgtaaccgccagagagattattgtgggaa 11709530  T
Q  105 cgtgcaaagagacgttatggttcgtttgaacc 136  Q
    |||||| ||||||||| |||||||||||||||    
T  11709531 cgtgcagagagacgttgtggttcgtttgaacc 11709562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 10532930 - 10532801
Alignment:
Q  1 tatttatagaggtggagggctgcagagccgttgcggtggcacacctgactctggcggttacgaaatcatgggaagtgtaaccgccagagagtttattgtg 100  Q
    |||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||| ||| ||||||||||||||| | ||||||||      
T  10532930 tatttatagaggtggagggctgcagagccgttgtaatggcacacctgactctggcggttacgaaatcgtggaaagtgtaaccgccagggtgtttattgca 10532831  T
Q  101 ggaacgtgcaaagagacgttatggttcgtt 130  Q
    |||||||| | ||||||||| |||||||||    
T  10532830 ggaacgtggagagagacgttgtggttcgtt 10532801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 171 - 276
Target Start/End: Original strand, 11709609 - 11709714
Alignment:
Q  171 aaggagtgtgtcgcaagtaactttgccaaacgtggtgtttgagctttggattgtattgaacctaagtaaatgggccaaagatccttttggtcggtcgaga 270  Q
    |||| |||||||||||||||  ||| |||||||||| |||| ||||||||||||||||  |||||||||||||||||||||||||||||| ||||| |||    
T  11709609 aaggggtgtgtcgcaagtaatattgtcaaacgtggtatttgggctttggattgtattgggcctaagtaaatgggccaaagatccttttggccggtccaga 11709708  T
Q  271 acagta 276  Q
    | ||||    
T  11709709 atagta 11709714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 82 - 249
Target Start/End: Complemental strand, 10532800 - 10532633
Alignment:
Q  82 cgccagagagtttattgtgggaacgtgcaaagagacgttatggttcgtttgaaccagtctctttcgctctgtgcaccccc-ttgtgtggaaaggagtgtg 180  Q
    |||||| | ||||||||  |||||||| | ||||||||| |||||||||||||||| |||||||||||  ||| |||||| |||  || || || |||||    
T  10532800 cgccagggtgtttattgcaggaacgtggagagagacgttgtggttcgtttgaaccaatctctttcgcttcgtgtaccccccttgcatgtaaggg-gtgtg 10532702  T
Q  181 tcgcaagtaactttgccaaacgtggtgtttgagctttggattgtattgaacctaagtaaatgggccaaa 249  Q
     |||||||| ||||||||||||||| |||||||||||| || ||||||  |||||||||||||| ||||    
T  10532701 ccgcaagtatctttgccaaacgtggcgtttgagctttgaatggtattgggcctaagtaaatgggtcaaa 10532633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 21 - 85
Target Start/End: Complemental strand, 22282225 - 22282161
Alignment:
Q  21 tgcagagccgttgcggtggcacacctgactctggcggttacgaaatcatgggaagtgtaaccgcc 85  Q
    |||||||||||||   |||||||| ||  |||||||||||||||||| || ||||||||| ||||    
T  22282225 tgcagagccgttgtaatggcacacgtgtgtctggcggttacgaaatcttgagaagtgtaatcgcc 22282161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 33273647 - 33273615
Alignment:
Q  1 tatttatagaggtggagggctgcagagccgttg 33  Q
    ||||||||||||||||||| |||||||||||||    
T  33273647 tatttatagaggtggagggttgcagagccgttg 33273615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 167; Significance: 3e-89; HSPs: 13)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 1 - 271
Target Start/End: Complemental strand, 19442251 - 19441982
Alignment:
Q  1 tatttatagaggtggagggctgcagagccgttgcggtggcacacctgactctggcggttacgaaatcatgggaagtgtaaccgccagagagtttattgtg 100  Q
    ||||||||||||||||| |||||| ||||||||   || |||| |||||||||||||||||||||||  ||||||| |||||||||||||||||||||||    
T  19442251 tatttatagaggtggagtgctgcaaagccgttgtaatgacacatctgactctggcggttacgaaatcgggggaagtataaccgccagagagtttattgtg 19442152  T
Q  101 ggaacgtgcaaagagacgttatggttcgtttgaaccagtctctttcgctctgtgcacccccttgtgtggaaaggagtgtgtcgcaagtaactttgccaaa 200  Q
    |||||||| | ||||||||| ||||||| ||||||||||||||||||||| |  ||||||||||||||| |||| |||||||||||||||||||||||||    
T  19442151 ggaacgtgtagagagacgttgtggttcgattgaaccagtctctttcgctccgcacacccccttgtgtgg-aaggggtgtgtcgcaagtaactttgccaaa 19442053  T
Q  201 cgtggtgtttgagctttggattgtattgaacctaagtaaatgggccaaagatccttttggtcggtcgagaa 271  Q
    ||||||||||||| ||||||||||||||  |||||||||||||||||||| ||||||||| ||||| ||||    
T  19442052 cgtggtgtttgagttttggattgtattgggcctaagtaaatgggccaaaggtccttttggccggtccagaa 19441982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 1 - 273
Target Start/End: Complemental strand, 19967559 - 19967288
Alignment:
Q  1 tatttatagaggtggagggctgcagagccgttgcggtggcacacctgactctggcggttacgaaatcatgggaagtgtaaccgccagagagtttattgtg 100  Q
    ||||||||||||||||||| |||| | ||||||   || |||||||| ||||||||||||||||||| ||||  |||||||||||||||||||||||| |    
T  19967559 tatttatagaggtggagggttgcataaccgttgtaatgacacacctggctctggcggttacgaaatcgtgggtggtgtaaccgccagagagtttattgcg 19967460  T
Q  101 ggaacgtgcaaagagacgttatggttcgtttgaaccagtctctttcgctctgtgcacccccttgtgtggaaaggagtgtgtcgcaagtaactttgccaaa 200  Q
    |||||||||| ||||||||| ||||||||||||||||||||||||||||| |||||||||||| ||||| |||| |||||||||| ||||||||| ||||    
T  19967459 ggaacgtgcagagagacgttgtggttcgtttgaaccagtctctttcgctccgtgcacccccttatgtgg-aaggggtgtgtcgcaggtaactttgtcaaa 19967361  T
Q  201 cgtggtgtttgagctttggattgtattgaacctaagtaaatgggccaaagatccttttggtcggtcgagaaca 273  Q
    |||||||||||  |||||||| ||||||  |||||||||||||  ||||| ||||||||  ||||| ||||||    
T  19967360 cgtggtgtttggactttggatcgtattgggcctaagtaaatggatcaaaggtccttttgaccggtccagaaca 19967288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 1 - 275
Target Start/End: Complemental strand, 24974027 - 24973754
Alignment:
Q  1 tatttatagaggtggagggctgcagagccgttgcggtggcacacctgactctggcggttacgaaatcatgggaagtgtaaccgccagagagtttattgtg 100  Q
    ||||||||||| | |||||||||||||||||||   |||||||||| |||||| ||||||||||||| ||||||||||||||||| | ||||||||||||    
T  24974027 tatttatagagttagagggctgcagagccgttgtaatggcacacctaactctgacggttacgaaatcgtgggaagtgtaaccgcctgtgagtttattgtg 24973928  T
Q  101 ggaacgtgcaaagagacgttatggttcgtttgaaccagtctctttcgctctgtgcacccccttgtgtggaaaggagtgtgtcgcaagtaactttgccaaa 200  Q
    |||| ||  |||||||||||  |||||||||||||| |||||||||| ||||||||||||||||  ||||| ||| |||||||||||||| ||||| |||    
T  24973927 ggaatgttgaaagagacgttgaggttcgtttgaaccggtctctttcgttctgtgcacccccttgcttggaaggga-tgtgtcgcaagtaattttgcaaaa 24973829  T
Q  201 cgtggtgtttgagctttggattgtattgaacctaagtaaatgggccaaagatccttttggtcggtcgagaacagt 275  Q
    ||||||||||| |||||||||  |||||  ||||||||||||| ||||||| |||||||| ||||| | ||||||    
T  24973828 cgtggtgtttgggctttggatgatattgggcctaagtaaatggaccaaagaaccttttggccggtccataacagt 24973754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 1 - 273
Target Start/End: Original strand, 9859026 - 9859302
Alignment:
Q  1 tatttatagaggtggagggctgcagagccgttgcggtggcacacc----tgactctggcggttacgaaatcatgggaagtgtaaccgccagagagtttat 96  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||     || ||||| ||||||||||||| |||||||||||||||||| |||||||||    
T  9859026 tatttatagaggtggagggctgcagagccgttgtggttgcacacacacttggctctgacggttacgaaatcgtgggaagtgtaaccgccaaagagtttat 9859125  T
Q  97 tgtgggaacgtgcaaagagacgttatggttcgtttgaaccagtctctttcgctctgtgcacccccttgtgtggaaaggagtgtgtcgcaagtaactttgc 196  Q
    || ||||||||||| ||||||||| |||||||||||||| ||||||  ||||||||||||||||| |    ||||||| |||||| |||||||| |||||    
T  9859126 tgcgggaacgtgcagagagacgttgtggttcgtttgaacgagtctcactcgctctgtgcaccccccttgcaggaaaggggtgtgttgcaagtaagtttgc 9859225  T
Q  197 caaacgtggtgtttgagctttggattgtattgaacctaagtaaatgggccaaagatccttttggtcggtcgagaaca 273  Q
    |||||||||||||||   |||||||||||||    |||||| |||  | ||||||||||||||| ||||| ||||||    
T  9859226 caaacgtggtgtttggattttggattgtattaggtctaagtcaataagtcaaagatccttttggccggtccagaaca 9859302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 1 - 276
Target Start/End: Complemental strand, 8995578 - 8995305
Alignment:
Q  1 tatttatagaggtggagggctgcagagccgttgcggtggcacacctgactctggcggttacgaaatcatgggaagtgtaaccgccagagagtttattgtg 100  Q
    |||||||||||||||||||||||||||||||||   || |||||||  |||| |||||||||||||| |||||||||||||||||| ||||||||||| |    
T  8995578 tatttatagaggtggagggctgcagagccgttgat-tgacacacctagctctagcggttacgaaatcgtgggaagtgtaaccgccatagagtttattgcg 8995480  T
Q  101 ggaacgtgcaaagagacgttatggttcgtttgaaccagtctctttcgctctgtgcacccccttgtgtggaaaggagtgtgtcgcaagtaactttgccaaa 200  Q
    |||||||||  ||||||||| ||| | | ||||||| |||||  |||||| ||||||||||| ||| ||||||| || ||||||||||||  ||| ||||    
T  8995479 ggaacgtgctgagagacgttgtggcttgcttgaaccggtctcgctcgctccgtgcaccccctcgtg-ggaaaggggtatgtcgcaagtaatgttgtcaaa 8995381  T
Q  201 cgtggtgtttgagctttggattgtattgaacctaagtaaatgggccaaagatccttttggtcggtcgagaacagta 276  Q
    ||||||||||  ||||| ||| ||||||   ||||||||||||||||||| ||||||||||||||| | |||||||    
T  8995380 cgtggtgtttaggctttagatagtattgggtctaagtaaatgggccaaaggtccttttggtcggtccaaaacagta 8995305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 1 - 276
Target Start/End: Complemental strand, 21817879 - 21817598
Alignment:
Q  1 tatttatagaggtggagggctgcagagccgttgcggtggcacacctgactctggcggttacgaaatcatgggaagtgtaaccgccagagagtttattgtg 100  Q
    |||||||| ||||||| ||| ||||||||||||   |||||||||| |||||| ||||||||||||| ||||||||||||| ||| | |||||||||| |    
T  21817879 tatttataaaggtggatggccgcagagccgttgtaatggcacacctaactctgacggttacgaaatcgtgggaagtgtaacagcctgtgagtttattgcg 21817780  T
Q  101 ggaacgtgcaaagagacgttatggttcgtttgaaccagtctctttcgctctgtgca-------cccccttgtgtggaaaggagtgtgtcgcaagtaactt 193  Q
    |||||||| ||||||||| |  ||||||||||||||  ||||||||| || |||||       ||||||   |||| |||| ||||||||| ||||| ||    
T  21817779 ggaacgtggaaagagacgctggggttcgtttgaaccgatctctttcgttccgtgcacccccccccccctcacgtgg-aaggggtgtgtcgcgagtaattt 21817681  T
Q  194 tgccaaacgtggtgtttgagctttggattgtattgaacctaagtaaatgggccaaagatccttttggtcggtcgagaacagta 276  Q
    |||||||||||||||||| ||||||||| ||| ||  ||||||| |||||||||||||||||||||| ||||| || ||||||    
T  21817680 tgccaaacgtggtgtttgggctttggatagtactgggcctaagtgaatgggccaaagatccttttggccggtccaggacagta 21817598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 5 - 259
Target Start/End: Original strand, 38621866 - 38622120
Alignment:
Q  5 tatagaggtggagggctgcagagccgttgcggtggcacacctgactctggcggttacgaaatcatgggaagtgtaaccgccagagagtttattgtgggaa 104  Q
    |||||||||||||||||||||||||||||   |||||||  || |||||| |||||||||||| ||| ||||||||| |||| | | ||||||| |||||    
T  38621866 tatagaggtggagggctgcagagccgttgtaatggcacatttggctctggtggttacgaaatcgtggaaagtgtaactgccaaacaatttattgcgggaa 38621965  T
Q  105 cgtgcaaagagacgttatggttcgtttgaaccagtctctttcgctctgtgcacccccttgtgtggaaaggagtgtgtcgcaagtaactttgccaaacgtg 204  Q
    |||||| ||||||||| |||||||||| ||||  ||||  |||||| ||| |||||| |    || |||| || ||||||||||||  | || |||||||    
T  38621966 cgtgcagagagacgttgtggttcgttttaaccgatctcgctcgctccgtggacccccctcgcggggaaggggtatgtcgcaagtaatgtcgctaaacgtg 38622065  T
Q  205 gtgtttgagctttggattgtattgaacctaagtaaatgggccaaagatccttttg 259  Q
     |||||||||||||||||||||||  ||||||||||| || ||||  ||||||||    
T  38622066 atgtttgagctttggattgtattgggcctaagtaaataggtcaaaagtccttttg 38622120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 89 - 275
Target Start/End: Complemental strand, 21815609 - 21815423
Alignment:
Q  89 gagtttattgtgggaacgtgcaaagagacgttatggttcgtttgaaccagtctctttcgctctgtgcaccccctt-gtgtggaaaggagtgtgtcgcaag 187  Q
    |||||||||| ||||||||| |||||||||||  ||||||||||||||||||||||||| || |||||||||| | | |||||| || ||||||| | ||    
T  21815609 gagtttattgcgggaacgtggaaagagacgttggggttcgtttgaaccagtctctttcgttccgtgcacccccctcgcgtggaaggg-gtgtgtcacgag 21815511  T
Q  188 taactttgccaaacgtggtgtttgagctttggattgtattgaacctaagtaaatgggccaaagatccttttggtcggtcgagaacagt 275  Q
    ||| |||||||||||||||||||| | ||||||| ||| ||  ||||||| |||||||||||||| ||||||| ||||| ||||||||    
T  21815510 taattttgccaaacgtggtgtttgggatttggatggtactgggcctaagtgaatgggccaaagattcttttggccggtccagaacagt 21815423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 8990902 - 8990666
Alignment:
Q  1 tatttatagaggtggagggctgcagagccgttgcggtggcacacctgactctggcggttacgaaatcatgggaagtgtaaccgccagagagtttattgtg 100  Q
    |||||| ||||||||||||||| ||||||||||   ||||||||||| |||| |||||||||||||| ||||||||||||| | ||||||||||||||||    
T  8990902 tatttacagaggtggagggctgtagagccgttgtaatggcacacctggctctagcggttacgaaatcgtgggaagtgtaactgtcagagagtttattgtg 8990803  T
Q  101 ggaacgtgcaaagagacgttatggttcgtttgaaccagtctctttcgctctgtgcaccccctt-gtgtggaaaggagtgtgtcgcaagtaactttgccaa 199  Q
     ||||||||| ||||||||| ||| | | ||||||| |||||  || ||| |||||||| ||| ||| || |||| | |||||||| ||||  ||| |||    
T  8990802 agaacgtgcagagagacgttgtggcttgcttgaaccggtctcgctcactccgtgcaccctcttcgtg-gggaaggggcgtgtcgcaggtaatgttgtcaa 8990704  T
Q  200 acgtggtgtttgagctttggattgtattgaacctaagt 237  Q
    ||| ||||||||  |||| ||| ||| |||||||||||    
T  8990703 acgaggtgtttggactttagatagtactgaacctaagt 8990666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 48 - 259
Target Start/End: Original strand, 49472311 - 49472519
Alignment:
Q  48 actctggcggttacgaaatcatgggaagtgtaaccgccagagagtttattgtgggaacgtgcaaagagacgttatggttcgtttgaaccagtctctttcg 147  Q
    |||||| ||||||||||||| | |  ||| |||||||  | |||||||||| ||||||||| |||||||||||  ||||| |||||||| ||||||||||    
T  49472311 actctgacggttacgaaatcgtag--agtataaccgcatgtgagtttattgcgggaacgtggaaagagacgttggggttcatttgaaccggtctctttcg 49472408  T
Q  148 ctctgtgcacccccttgtgtggaaaggagtgtgtcgcaagtaactttgccaaacgtggtgtttgagctttggattgtattgaacctaagtaaatgggcca 247  Q
     || ||||||||||| | ||||  ||| |||| |||| ||||| |||| |||||| ||||||||  |||||||| ||||||  |||||||||||||| ||    
T  49472409 ttccgtgcaccccctcgcgtgg-gaggggtgtttcgcgagtaattttgtcaaacgcggtgtttggactttggatggtattgggcctaagtaaatgggtca 49472507  T
Q  248 aagatccttttg 259  Q
    ||||||||||||    
T  49472508 aagatccttttg 49472519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 22186127 - 22186045
Alignment:
Q  1 tatttatagaggtggagggctgcagagccgttgcggtggcacacctgactctggcggttacgaaatcatgggaagtgtaaccg 83  Q
    |||||||||||||||| ||||||||||||||||   |||||||||| |||| | ||||||| ||||| |||||||||||||||    
T  22186127 tatttatagaggtggatggctgcagagccgttgtaatggcacaccttactcggacggttacaaaatcgtgggaagtgtaaccg 22186045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 75 - 273
Target Start/End: Original strand, 33028926 - 33029124
Alignment:
Q  75 gtgtaaccgccagagagtttattgtgggaacgtgcaaagagacgttatggttcgttt-gaaccagtctctttcgctctgtgcacccccttgtgtggaaag 173  Q
    |||||||||  |||||| |||||| | |||||| || ||||||||| ||||| |||| ||||| ||| |  | |||| || ||||||||   | |||| |    
T  33028926 gtgtaaccgttagagagattattgcgagaacgtacatagagacgttgtggtttgttttgaaccggtcccgcttgctccgttcaccccctcacggggaagg 33029025  T
Q  174 gagtgtgtcgcaagtaactttgccaaacgtggtgtttgagctttggattgtattgaacctaagtaaatgggccaaagatccttttggtcggtcgagaaca 273  Q
    | |||||||||||||||  | | ||||||||||||||| |||||||||| |||||  ||||||||| || ||||||  || |||||| ||||| ||||||    
T  33029026 g-gtgtgtcgcaagtaatatagtcaaacgtggtgtttgggctttggattatattgtgcctaagtaattgagccaaaactcattttggccggtccagaaca 33029124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 21815664 - 21815619
Alignment:
Q  1 tatttatagaggtggagggctgcagagccgttgcggtggcacacct 46  Q
    |||||||||||||||||||||||||||| ||||   ||||||||||    
T  21815664 tatttatagaggtggagggctgcagagctgttgtaatggcacacct 21815619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 156; Significance: 1e-82; HSPs: 13)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 1 - 275
Target Start/End: Original strand, 3770319 - 3770593
Alignment:
Q  1 tatttatagaggtggagggctgcagagccgttgcggtggcacacctgactctggcggttacgaaatcatgggaagtgtaaccgccagagagtttattgtg 100  Q
    |||||||||||||||||||||||||||||||||   ||||||||||| ||||||||||||| ||||| ||| |||||||||||| ||||||||||||| |    
T  3770319 tatttatagaggtggagggctgcagagccgttgtaatggcacacctggctctggcggttacaaaatcgtggaaagtgtaaccgctagagagtttattgcg 3770418  T
Q  101 ggaacgtgcaaagagacgttatggttcgtttgaaccagtctctttcgctctgtgca-cccccttgtgtggaaaggagtgtgtcgcaagtaactttgccaa 199  Q
    | |||||||| |||||||||  ||||||||||||||||||||| ||||||  |||| |||||||| |||| |||| |||||| |||||||||||||||||    
T  3770419 gaaacgtgcagagagacgttgaggttcgtttgaaccagtctctctcgctccatgcaccccccttgagtgg-aaggggtgtgttgcaagtaactttgccaa 3770517  T
Q  200 acgtggtgtttgagctttggattgtattgaacctaagtaaatgggccaaagatccttttggtcggtcgagaacagt 275  Q
    |||||||||||| |||||| |||||||||  |||||||||||||||||||| ||||||||| ||||| ||||||||    
T  3770518 acgtggtgtttgggctttgaattgtattgggcctaagtaaatgggccaaaggtccttttggccggtccagaacagt 3770593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 150; E-Value: 5e-79
Query Start/End: Original strand, 1 - 273
Target Start/End: Complemental strand, 25134074 - 25133793
Alignment:
Q  1 tatttatagaggtggagggctgcagagccgttgcggtggcacacctgactctggcggttacgaaatcatgggaagtgtaaccgccagagagtttattgtg 100  Q
    |||||||||||||||||||||||||||||||||  |||||||||||| ||||||||||||||||||| ||| |||||||||||||||||||||||||| |    
T  25134074 tatttatagaggtggagggctgcagagccgttgtagtggcacacctggctctggcggttacgaaatcgtggtaagtgtaaccgccagagagtttattgcg 25133975  T
Q  101 ggaacgtgcaaagagacgttatggttcgtttgaaccagtctctttcgctctgtgca---------cccccttgtgtggaaaggagtgtgtcgcaagtaac 191  Q
    |||||||||||||||||||| |||||||||||||||||||||  | |||| |||||         ||||| | |  ||||||| ||||||||||||||||    
T  25133974 ggaacgtgcaaagagacgttgtggttcgtttgaaccagtctcgcttgctccgtgcaccccccaccccccccttttaggaaaggggtgtgtcgcaagtaac 25133875  T
Q  192 tttgccaaacgtggtgtttgagctttggattgtattgaacctaagtaaatgggccaaagatccttttggtcggtcgagaaca 273  Q
    |||||||||||||||||||| ||||||||||||| ||  |||||||||||||| |||||||| |||||| | ||| ||||||    
T  25133874 tttgccaaacgtggtgtttgggctttggattgtaatgggcctaagtaaatgggtcaaagatctttttggcccgtccagaaca 25133793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 1 - 273
Target Start/End: Complemental strand, 23755959 - 23755687
Alignment:
Q  1 tatttatagaggtggagggctgcagagccgttgcggtggcacacctgactctggcggttacgaaatcatgggaagtgtaaccgccagagagtttattgtg 100  Q
    |||||||||||||||| ||||| ||||||||||   ||||||||||| |||| |||||||||||||| |||||||||||||||||| ||||||||||| |    
T  23755959 tatttatagaggtggaaggctgtagagccgttgtaatggcacacctggctctagcggttacgaaatcgtgggaagtgtaaccgccatagagtttattgcg 23755860  T
Q  101 ggaacgtgcaaagagacgttatggttcgtttgaaccagtctctttcgctctgtgca-cccccttgtgtggaaaggagtgtgtcgcaagtaactttgccaa 199  Q
    |||||||||| ||||||||| |||||| |||||||||||| ||||||||| ||||| ||||||||  ||| |||| |||||| |||||||||||| ||||    
T  23755859 ggaacgtgcagagagacgttgtggttcttttgaaccagtcactttcgctccgtgcaccccccttgcttgg-aaggggtgtgttgcaagtaactttaccaa 23755761  T
Q  200 acgtggtgtttgagctttggattgtattgaacctaagtaaatgggccaaagatccttttggtcggtcgagaaca 273  Q
    || ||||||||| ||||||||||||||||  |||| ||||||||||||||| ||||||||| ||||| ||||||    
T  23755760 acatggtgtttgggctttggattgtattgggcctaggtaaatgggccaaaggtccttttggccggtccagaaca 23755687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 1 - 259
Target Start/End: Complemental strand, 26155123 - 26154865
Alignment:
Q  1 tatttatagaggtggagggctgcagagccgttgcggtggcacacctgactctggcggttacgaaatcatgggaagtgtaaccgccagagagtttattgtg 100  Q
    |||||||||||||||||||||||| |||||||    ||||||||||| || ||| |||||||||||| ||||||||||||||||||||| |||||||| |    
T  26155123 tatttatagaggtggagggctgcatagccgttataatggcacacctggctatggtggttacgaaatcgtgggaagtgtaaccgccagagcgtttattgcg 26155024  T
Q  101 ggaacgtgcaaagagacgttatggttcgtttgaaccagtctctttcgctctgtgca-cccccttgtgtggaaaggagtgtgtcgcaagtaactttgccaa 199  Q
    ||||||| |||||||| ||| |||||||||||||| | |||||||||||| ||||| ||||||||||||||| ||| |||||||||||||||||||||||    
T  26155023 ggaacgtacaaagagatgttgtggttcgtttgaactaatctctttcgctccgtgcaccccccttgtgtggaaggga-tgtgtcgcaagtaactttgccaa 26154925  T
Q  200 acgtggtgtttgagctttggattgtattgaacctaagtaaatgggccaaagatccttttg 259  Q
    ||||||||||||| ||||  ||| ||||| ||||||||||||||| ||||  ||||||||    
T  26154924 acgtggtgtttgaactttaaattatattggacctaagtaaatgggtcaaaagtccttttg 26154865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 1 - 273
Target Start/End: Complemental strand, 41266336 - 41266065
Alignment:
Q  1 tatttatagaggtggagggctgcagagccgttgcggtggcacacctgactctggcggttacgaaatcatgggaagtgtaaccgccagagagtttattgtg 100  Q
    |||||||||||||||||||||||||||||||||   ||||||||||| ||||||||||||||| ||| || |||||||||||||| |||||||||||| |    
T  41266336 tatttatagaggtggagggctgcagagccgttgtaatggcacacctggctctggcggttacgatatcgtgagaagtgtaaccgcccgagagtttattgcg 41266237  T
Q  101 ggaacgtgcaaagagacgttatggttcgtttgaaccagtctctttcgctctgtgcacccccttgtgtggaaaggagtgtgtcgcaagtaactttgccaaa 200  Q
    |||||||||| ||||||||| ||||||||||||||||||| | ||||||| ||||||||| |||  || || || | |||| ||||||||||||||||||    
T  41266236 ggaacgtgcagagagacgttgtggttcgtttgaaccagtcac-ttcgctccgtgcaccccattgcctgaaagggggggtgttgcaagtaactttgccaaa 41266138  T
Q  201 cgtggtgtttgagctttggattgtattgaacctaagtaaatgggccaaagatccttttggtcggtcgagaaca 273  Q
    | |||||||||   ||||||| ||||||  |||||||||||||| | || |||||||||  ||||| ||||||    
T  41266137 catggtgtttggattttggatcgtattgggcctaagtaaatgggtctaaaatccttttgaccggtccagaaca 41266065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 42534263 - 42534036
Alignment:
Q  1 tatttatagaggtggagggctgcagagccgttgcggtggcacacctgactctggcggttacgaaatcatgggaagtgtaaccgccagagagtttattgtg 100  Q
    |||||||||||||||||||||||||||||||||   ||||||| ||| ||||||||||||||||||| |||||||||||||||||||||||||||||| |    
T  42534263 tatttatagaggtggagggctgcagagccgttgtaatggcacatctggctctggcggttacgaaatcgtgggaagtgtaaccgccagagagtttattgcg 42534164  T
Q  101 ggaacgtgcaaagagacgttatggttcgtttgaaccagtctctttcgctctgtgca-cccccttgtgtggaaaggagtgtgtcgcaagtaactttgccaa 199  Q
    |||||||||| ||||||||| ||| ||||||||||  |||||  |||||  ||||| |||||||||| ||||||| | |||||||||||||  ||| |||    
T  42534163 ggaacgtgcagagagacgttgtggctcgtttgaacaggtctcgctcgctacgtgcaccccccttgtg-ggaaaggggagtgtcgcaagtaaggttgacaa 42534065  T
Q  200 acgtggtgtttgagctttggattgtattg 228  Q
    |||||||||||| ||||||||||||||||    
T  42534064 acgtggtgtttgggctttggattgtattg 42534036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 1 - 273
Target Start/End: Original strand, 3105263 - 3105535
Alignment:
Q  1 tatttatagaggtggagggctgcagagccgttgcggtggcacacctgactctggcggttacgaaatcatgggaagtgtaaccgccagagagtttattgtg 100  Q
    ||||||||||||||||||  || ||||||||||   || ||||||| |||||   ||||| |||||| |||||||||||||||||||||||||||||| |    
T  3105263 tatttatagaggtggaggattgtagagccgttgtaatgacacacctaactctcatggttatgaaatcgtgggaagtgtaaccgccagagagtttattgcg 3105362  T
Q  101 ggaacgtgcaaagagacgttatggttcgtttgaaccagtctctttcgctctgtgcacccccttgtgtggaaaggagtgtgtcgcaagtaactttgccaaa 200  Q
    |||||||||| ||||||||| ||| ||||||||||| |||||  ||||||||||||| |||||||| | || || |||||||||||||||  ||| ||||    
T  3105363 ggaacgtgcagagagacgttgtggctcgtttgaaccggtctcgctcgctctgtgcactcccttgtgggaaagggggtgtgtcgcaagtaatgttgtcaaa 3105462  T
Q  201 cgtggtgtttgagctttggattgtattgaacctaagtaaatgggccaaagatccttttggtcggtcgagaaca 273  Q
    ||||||||||| |||||||||||| |||  ||||||||||||| | |||| ||||||||| | ||| ||||||    
T  3105463 cgtggtgtttgggctttggattgtgttgggcctaagtaaatggactaaaggtccttttggccagtccagaaca 3105535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 5 - 273
Target Start/End: Original strand, 27347232 - 27347499
Alignment:
Q  5 tatagaggtggagggctgcagagccgttgcggtggcacacctgactctggcggttacgaaatcatgggaagtgtaaccgccagagagtttattgtgggaa 104  Q
    |||||| |||||||||| || ||||||||   |||||||||| || ||| ||||||||||||||||||||||||||| |||   |||||||||| |||||    
T  27347232 tatagacgtggagggctacaaagccgttgtaatggcacacctaacactgacggttacgaaatcatgggaagtgtaactgcctatgagtttattgcgggaa 27347331  T
Q  105 cgtgcaaagagacgttatggttcgtttgaaccagtctctttcgctctgtgcacccccttgtgtggaaaggagtgtgtcgcaagtaactttgccaaacgtg 204  Q
    |||| |||||||||||  ||||||||||||||||||||||||| | ||||||||||||    ||| |||| ||||||||| ||||| |||||||||||||    
T  27347332 cgtggaaagagacgttggggttcgtttgaaccagtctctttcgttatgtgcaccccctctcatgg-aaggggtgtgtcgcgagtaattttgccaaacgtg 27347430  T
Q  205 gtgtttgagctttggattgtattgaacctaagtaaatgggccaaagatccttttggtcggtcgagaaca 273  Q
     |||||| ||||||||| ||||||  | |||||||||||||||||||||||||||  ||||| ||||||    
T  27347431 atgtttgggctttggatggtattgggcttaagtaaatgggccaaagatccttttgaccggtccagaaca 27347499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 5 - 243
Target Start/End: Original strand, 19092784 - 19093021
Alignment:
Q  5 tatagaggtggagggctgcagagccgttgcggtggcacacctgactctggcggttacgaaatcatgggaagtgtaaccgccagagagtttattgtgggaa 104  Q
    ||||||||||| |||||||||||||||||   || |||||| |||||| |||||| |||| |  ||||||||||||||||||||||| |||||| |||||    
T  19092784 tatagaggtggggggctgcagagccgttgtaatgacacaccagactctcgcggtttcgaacttgtgggaagtgtaaccgccagagagattattgcgggaa 19092883  T
Q  105 cgtgcaaagagacgttatggttcgtttgaaccagtctctttcgctctgtgcacccccttgtgtggaaaggagtgtgtcgcaagtaactttgccaaacgtg 204  Q
    |||||| ||||||||| |||||||||||||| |||||  ||||||| ||||||||||| |||  ||| ||| ||||||||||||||  || |||||| ||    
T  19092884 cgtgcagagagacgttgtggttcgtttgaactagtcttgttcgctccgtgcaccccctcgtggagaaggga-tgtgtcgcaagtaatgttaccaaacatg 19092982  T
Q  205 gtgtttgagctttggattgtattgaacctaagtaaatgg 243  Q
    ||||||| |||||| ||  |||||  |||||||||||||    
T  19092983 gtgtttgggctttgaataatattgggcctaagtaaatgg 19093021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 8 - 159
Target Start/End: Original strand, 23929863 - 23930014
Alignment:
Q  8 agaggtggagggctgcagagccgttgcggtggcacacctgactctggcggttacgaaatcatgggaagtgtaaccgccagagagtttattgtgggaacgt 107  Q
    ||||||||||||||||||||||||||   ||||||||||| |||||||||||||| |||| ||||||||||||||||| |||||||||||||||||||||    
T  23929863 agaggtggagggctgcagagccgttgtaatggcacacctggctctggcggttacggaatcgtgggaagtgtaaccgccggagagtttattgtgggaacgt 23929962  T
Q  108 gcaaagagacgttatggttcgtttgaaccagtctctttcgctctgtgcaccc 159  Q
    ||| |||||| || |||||| |||||||| |||||  |||||| ||||||||    
T  23929963 gcagagagacattgtggttcatttgaaccggtctcgctcgctccgtgcaccc 23930014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 2 - 135
Target Start/End: Original strand, 29568375 - 29568507
Alignment:
Q  2 atttatagaggtggagggctgcagagccgttgcggtggcacacctgactctggcggttacgaaatcatgggaagtgtaaccgccagagagtttattgtgg 101  Q
    |||||||||||||||||||| |||||||||||   ||| ||||||| ||||||||||||||||||| |||||||||||||||| |||||||||||||  |    
T  29568375 atttatagaggtggagggctacagagccgttgtaatggtacacctggctctggcggttacgaaatcgtgggaagtgtaaccgctagagagtttattg-cg 29568473  T
Q  102 gaacgtgcaaagagacgttatggttcgtttgaac 135  Q
    ||||||| | ||||||||| ||| ||||||||||    
T  29568474 gaacgtgtagagagacgttgtggctcgtttgaac 29568507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 171 - 273
Target Start/End: Original strand, 23932908 - 23933010
Alignment:
Q  171 aaggagtgtgtcgcaagtaactttgccaaacgtggtgtttgagctttggattgtattgaacctaagtaaatgggccaaagatccttttggtcggtcgaga 270  Q
    |||| |||||||||||||||  ||| || |||||||||||| |||||||||||||||   |||||||||||||||||||||||||||||| ||||| |||    
T  23932908 aaggggtgtgtcgcaagtaatgttgtcagacgtggtgtttgggctttggattgtattaggcctaagtaaatgggccaaagatccttttggccggtctaga 23933007  T
Q  271 aca 273  Q
    |||    
T  23933008 aca 23933010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 213 - 276
Target Start/End: Complemental strand, 26159156 - 26159093
Alignment:
Q  213 gctttggattgtattgaacctaagtaaatgggccaaagatccttttggtcggtcgagaacagta 276  Q
    |||||| |||||||||  |||||||||||| ||||||  ||||||||| ||||| |||||||||    
T  26159156 gctttgaattgtattgggcctaagtaaatgagccaaaagtccttttggccggtccagaacagta 26159093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 153; Significance: 7e-81; HSPs: 7)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 153; E-Value: 7e-81
Query Start/End: Original strand, 13 - 260
Target Start/End: Original strand, 19790346 - 19790593
Alignment:
Q  13 tggagggctgcagagccgttgcggtggcacacctgactctggcggttacgaaatcatgggaagtgtaaccgccagagagtttattgtgggaacgtgcaaa 112  Q
    |||||||||||||||||||||   ||||||||||||||||| ||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| |    
T  19790346 tggagggctgcagagccgttgtaatggcacacctgactctgacggttacgaaatcgtgggaagtgtaaccgtcagagagtttattgtgggaacgtgcaga 19790445  T
Q  113 gagacgttatggttcgtttgaaccagtctctttcgctctgtgca-cccccttgtgtggaaaggagtgtgtcgcaagtaactttgccaaacgtggtgtttg 211  Q
    |||||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||| |||| | ||||||||||||||||| ||||||  ||||||||    
T  19790446 gagacgttgtggttcgtttgaaccagtctctttcgctctgtgcaccccccttgtctgg-aaggggcgtgtcgcaagtaactttaccaaacacggtgtttg 19790544  T
Q  212 agctttggattgtattgaacctaagtaaatgggccaaagatccttttgg 260  Q
     | ||||||| ||||||  |||||||||||||||||| |||||||||||    
T  19790545 ggttttggatggtattgggcctaagtaaatgggccaatgatccttttgg 19790593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 1 - 259
Target Start/End: Original strand, 22915111 - 22915367
Alignment:
Q  1 tatttatagaggtggagggctgcagagccgttgcggtggcacacctgactctggcggttacgaaatcatgggaagtgtaaccgccagagagtttattgtg 100  Q
    |||||||| |||||||| |||||||||||||||   ||| |||| || ||| |||||||| |||||| ||||||||||||| || ||||||||||||| |    
T  22915111 tatttataaaggtggagagctgcagagccgttgtaatggtacacttggctccggcggttatgaaatcgtgggaagtgtaacagctagagagtttattgcg 22915210  T
Q  101 ggaacgtgcaaagagacgttatggttcgtttgaaccagtctctttcgctctgtgcacccccttgtgtggaaaggagtgtgtcgcaagtaactttgccaaa 200  Q
    |||||||| | ||||||||| || ||||||||||| ||||||  |||||| ||||| ||||||| | |||| || |||||| ||||||||  ||| ||||    
T  22915211 ggaacgtgaagagagacgttgtgattcgtttgaactagtctcgctcgctccgtgca-ccccttgcg-ggaagggggtgtgttgcaagtaaacttgtcaaa 22915308  T
Q  201 cgtggtgtttgagctttggattgtattgaacctaagtaaatgggccaaagatccttttg 259  Q
    ||||||||||| ||||  ||||||||||  |||||||||||| ||||||  ||||||||    
T  22915309 cgtggtgtttgcgcttcagattgtattgggcctaagtaaatgagccaaatgtccttttg 22915367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 1 - 273
Target Start/End: Complemental strand, 16853149 - 16852878
Alignment:
Q  1 tatttatagaggtggagggctgcagagccgttgcggtggcacacctgactctggcggttacgaaatcatgggaagtgtaaccgccagagagtttattgtg 100  Q
    |||||||||||||||||||||||| |   ||||   ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| |    
T  16853149 tatttatagaggtggagggctgcaaatatgttgtaatggcacacctggctctggcggttacgaaatcgtgggaagtgtaaccgccagagagtttattgcg 16853050  T
Q  101 ggaacgtgcaaagagacgttatggttcgtttgaaccagtctctttcgctctgtgcacccccttgtgtggaaagg-agtgtgtcgcaagtaactttgccaa 199  Q
    | |||||||| ||||||||| ||| | ||||||||| || ||  |||||| ||| ||| || |  |  || |||  ||| ||||||||| |  || ||||    
T  16853049 gtaacgtgcagagagacgttgtggcttgtttgaaccggtgtcactcgctccgtgtacctccct-cgcagagaggtggtgcgtcgcaagtgatgttaccaa 16852951  T
Q  200 acgtggtgtttgagctttggattgtattgaacctaagtaaatgggccaaagatccttttggtcggtcgagaaca 273  Q
    ||||||  |||||||||||||||||||||  ||||||| ||||| ||||| | |||||||| ||||| ||||||    
T  16852950 acgtggaatttgagctttggattgtattgggcctaagt-aatggtccaaaaacccttttggccggtccagaaca 16852878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 18 - 275
Target Start/End: Original strand, 44635823 - 44636081
Alignment:
Q  18 ggctgcagagccgttgcggtggcacacctgactctggcggttacgaaatcatgggaagtgtaaccgccagagagtttattgtgggaacgtgcaaagagac 117  Q
    ||||||||||||||||   |||||||| ||| || | ||||||||||||| |||||||||||||||||||||||    | | |||||||||| |||||||    
T  44635823 ggctgcagagccgttgtaatggcacacgtgagtccgtcggttacgaaatcgtgggaagtgtaaccgccagagagagattcgcgggaacgtgcgaagagac 44635922  T
Q  118 gttatggttcgtttgaaccagtctctttcgctctgtgcacccccttgtgtggaaaggagtgtgtcgcaagtaactttgccaaacgtggtgtttgagcttt 217  Q
    ||| | |||||||||||| ||||||  | |||| || || ||||||    || |||  |||||| || |||||  ||| ||||| |||| ||||| ||||    
T  44635923 gttgtagttcgtttgaactagtctcgcttgctccgtacatccccttcgcggggaagcggtgtgttgcgagtaatgttgtcaaacatggtatttgaccttt 44636022  T
Q  218 gga-ttgtattgaacctaagtaaatgggccaaagatccttttggtcggtcgagaacagt 275  Q
     || ||||||||| |||||||||||||||| ||  | ||||||  ||||| ||||||||    
T  44636023 cgatttgtattgagcctaagtaaatgggcctaatgttcttttgaccggtctagaacagt 44636081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 5 - 244
Target Start/End: Original strand, 16914769 - 16915008
Alignment:
Q  5 tatagaggtggagggctgcagagccgttgcggtggcacacctgactctggcggttacgaaatcatgggaagtgtaaccgccagagagtttattgtgggaa 104  Q
    ||||||||||||||||||||||||| |||   |||||||  |   |||||||||||||||||| ||||| ||||||||   |||||  | |||| |||||    
T  16914769 tatagaggtggagggctgcagagccattgtaatggcacagatcggtctggcggttacgaaatcgtgggaggtgtaaccagtagagaaataattgcgggaa 16914868  T
Q  105 cgtgcaaagagacgttatggttcgtttgaaccagtctctttcgctctgtgcacccccttgtgtggaaaggagtgtgtcgcaagtaactttgccaaacgtg 204  Q
    ||||||||||||||||  || ||||||||||| |||  | | |||| || ||||||| |    |  | || || |||||||||||| ||| |||||||||    
T  16914869 cgtgcaaagagacgttgcggctcgtttgaaccggtccttcttgctccgttcacccccctcacggagagggggtatgtcgcaagtaagttttccaaacgtg 16914968  T
Q  205 gtgtttgagctttggattgtattgaacctaagtaaatggg 244  Q
    ||||||| |  | |||||||||||  ||||||||||||||    
T  16914969 gtgtttgggtatgggattgtattgggcctaagtaaatggg 16915008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 57 - 257
Target Start/End: Complemental strand, 3559204 - 3559006
Alignment:
Q  57 gttacgaaatcatgggaagtgtaaccgccagagagtttattgtgggaacgtgcaaagagacgttatggttcgtttgaaccagtctctttcgctctgtgca 156  Q
    ||||||||||| ||| |||||||||| ||| ||||    ||| |||||| ||| |||||| |||   ||||||||||||| ||||| || ||||||||||    
T  3559204 gttacgaaatcgtggaaagtgtaacctccaaagagagatttgcgggaacatgcgaagagatgttgcagttcgtttgaaccggtctcgtttgctctgtgca 3559105  T
Q  157 cccccttgtgtggaaaggagtgtgtcgcaagtaactttgccaaacgtggtgtttgagctttggattgtattgaacctaagtaaatgggccaaagatcctt 256  Q
    |||||| | | || |||| |||||| || |||||  |||||||| | ||| |||| || ||||||  ||||||  ||| ||||||||||| |||||||||    
T  3559104 ccccctcgcg-gggaaggggtgtgttgcgagtaatgttgccaaatgcggtatttgggc-ttggataatattgagactatgtaaatgggcctaagatcctt 3559007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 69 - 245
Target Start/End: Complemental strand, 13016636 - 13016461
Alignment:
Q  69 tgggaagtgtaaccgccagagagtttattgtgggaacgtgcaaagagacgttatggttcgtttgaaccagtctctttcgctctgtgcacccccttgtgtg 168  Q
    |||||||||||||||||||||||    | | |||||||||| |||||||||| | ||||||||||||   ||||  | ||| |||||||||| ||||| |    
T  13016636 tgggaagtgtaaccgccagagagagattcgcgggaacgtgcgaagagacgttgtagttcgtttgaactgatctcgcttgctatgtgcacccctttgtg-g 13016538  T
Q  169 gaaaggagtgtgtcgcaagtaactttgccaaacgtggtgtttgagctttggattgtattgaacctaagtaaatgggc 245  Q
    | |||| |||||| |||  |||  ||||||||||| || |||| |||| |  ||||| ||  |||||||||||||||    
T  13016537 ggaaggggtgtgttgcacataatgttgccaaacgttgtatttgggcttggatttgtactgggcctaagtaaatgggc 13016461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 152; Significance: 3e-80; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 1 - 276
Target Start/End: Complemental strand, 16456 - 16182
Alignment:
Q  1 tatttatagaggtggagggctgcagagccgttgcggtggcacacctgactctggcggttacgaaatcatgggaagtgtaaccgccagagagtttattgtg 100  Q
    ||||||||||||||||||||||||||||| |||   ||| ||||||| ||||||||||||| ||||| |||||||||||||| ||||||||||||||| |    
T  16456 tatttatagaggtggagggctgcagagccattgtaatggtacacctggctctggcggttacaaaatcgtgggaagtgtaaccaccagagagtttattgcg 16357  T
Q  101 ggaacgtgcaaagagacgttatggttcgtttgaaccagtctctttcgctctgtgcacccccttgtgtggaaaggagtgtgtcgcaagtaactttgccaaa 200  Q
    |||||||||| ||||| ||| ||||||||||||||||||||| ||||||| ||||||||||||||| ||||||| |||||||||| |||||||| |||||    
T  16356 ggaacgtgcagagagatgttgtggttcgtttgaaccagtctcattcgctccgtgcacccccttgtg-ggaaaggggtgtgtcgcatgtaacttttccaaa 16258  T
Q  201 cgtggtgtttgagctttggattgtattgaacctaagtaaatgggccaaagatccttttggtcggtcgagaacagta 276  Q
    | | ||||||| ||||||| ||||||||  ||||||||||||| |||||| ||||||||| | ||| |||||||||    
T  16257 catagtgtttgggctttgggttgtattgggcctaagtaaatggaccaaaggtccttttggccagtccagaacagta 16182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 152; Significance: 3e-80; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 1 - 273
Target Start/End: Original strand, 391518 - 391791
Alignment:
Q  1 tatttatagaggtggagggctgcagagccgttgcggtggcacacctgactctggcggttacgaaatcatgggaagtgtaaccgccagagagtttattgtg 100  Q
    ||||||||||||||||||| |||||||||||||   ||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||| |    
T  391518 tatttatagaggtggagggttgcagagccgttgtaatggcacacctggctctggcggttacgaaattatgggaagtgtaaccgccagagagtttattgcg 391617  T
Q  101 ggaacgtgcaaagagacgttatggttcgtttgaaccagtctctttcgctctgtgca--cccccttgtgtggaaaggagtgtgtcgcaagtaactttgcca 198  Q
    ||||| |||| ||||||||| |||||||||||||| ||||||  |||||| |||||  |||||||| | ||||||| |||||| |||||||| |||||||    
T  391618 ggaacctgcagagagacgttgtggttcgtttgaactagtctcgctcgctccgtgcacccccccttgcg-ggaaaggggtgtgttgcaagtaagtttgcca 391716  T
Q  199 aacgtggtgtttgagctttggattgtattgaacctaagtaaatgggccaaagatccttttggtcggtcgagaaca 273  Q
    | ||||||||||| | |||||||||||||| |||||||||||||| ||| || ||||||||||||||| ||||||    
T  391717 accgtggtgtttggggtttggattgtattggacctaagtaaatggaccacaggtccttttggtcggtccagaaca 391791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 1 - 276
Target Start/End: Original strand, 380820 - 381095
Alignment:
Q  1 tatttatagaggtggagggctgcagagccgttgcggtggcacacctgactctggcggttacgaaatcatgggaagtgtaaccgccagagagtttattgtg 100  Q
    |||||||||||||||||||||||||||||||||   ||||||||||| |||||| |||||||||||  || ||||||||||||||||||| ||||||| |    
T  380820 tatttatagaggtggagggctgcagagccgttgtaatggcacacctggctctggaggttacgaaattgtgagaagtgtaaccgccagagactttattgcg 380919  T
Q  101 ggaacgtgcaaagagacgttatggttcgtttgaaccagtctctttcgctctgtgcacccccttgtgtggaaaggagtgtgtcgcaagtaactttgccaaa 200  Q
    |||||||| | ||||||||| |||||||||||||||||||||  |||||| |||||||||| |    ||||||| |||||  |||||||| ||||||||     
T  380920 ggaacgtgtagagagacgttgtggttcgtttgaaccagtctcgctcgctccgtgcaccccccttgcaggaaaggggtgtggtgcaagtaagtttgccaac 381019  T
Q  201 cgtggtgtttgagctttggattgtattgaacctaagtaaatgggccaaagatccttttggtcggtcgagaacagta 276  Q
    | ||||||||| ||||||||||||||||  | ||||||||||||||| |  ||||||||| ||||| | |||||||    
T  381020 catggtgtttgggctttggattgtattgggcgtaagtaaatgggccacatgtccttttggccggtccataacagta 381095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 152; Significance: 3e-80; HSPs: 18)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 1 - 260
Target Start/End: Original strand, 20093595 - 20093853
Alignment:
Q  1 tatttatagaggtggagggctgcagagccgttgcggtggcacacctgactctggcggttacgaaatcatgggaagtgtaaccgccagagagtttattgtg 100  Q
    |||||||||||||||||||||||||||||||||   ||||||||||| | || |||||||||||||| |||||||||||||| ||| |||| |||||| |    
T  20093595 tatttatagaggtggagggctgcagagccgttgtaatggcacacctggccctagcggttacgaaatcgtgggaagtgtaaccaccaaagagcttattgcg 20093694  T
Q  101 ggaacgtgcaaagagacgttatggttcgtttgaaccagtctctttcgctctgtgcacccccttgtgtggaaaggagtgtgtcgcaagtaactttgccaaa 200  Q
    |||| ||||| ||||||||| |||||||||||||||||||||| |||||| |||||||| ||||||||| |||| || ||| ||||||||||||| ||||    
T  20093695 ggaatgtgcagagagacgttgtggttcgtttgaaccagtctctgtcgctccgtgcaccctcttgtgtgg-aaggggtttgttgcaagtaactttgacaaa 20093793  T
Q  201 cgtggtgtttgagctttggattgtattgaacctaagtaaatgggccaaagatccttttgg 260  Q
    |||||||||||  ||||||||||||||| ||||||||||||||| |||||||||||||||    
T  20093794 cgtggtgtttggactttggattgtattggacctaagtaaatgggtcaaagatccttttgg 20093853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 1 - 249
Target Start/End: Original strand, 29164908 - 29165155
Alignment:
Q  1 tatttatagaggtggagggctgcagagccgttgcggtggcacacctgactctggcggttacgaaatcatgggaagtgtaaccgccagagagtttattgtg 100  Q
    |||||||||||||||| ||||||||||||||||   || ||||||||||||| |  ||||||||||| ||||||||||||| || ||||||||||||| |    
T  29164908 tatttatagaggtggacggctgcagagccgttgtaatgacacacctgactctagaagttacgaaatcgtgggaagtgtaactgctagagagtttattgcg 29165007  T
Q  101 ggaacgtgcaaagagacgttatggttcgtttgaaccagtctctttcgctctgtgcacccccttgtgtggaaaggagtgtgtcgcaagtaactttgccaaa 200  Q
    |||||||||| ||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||| ||||||| ||||||| |||||||||||||||||    
T  29165008 ggaacgtgcagagagacgttgtggttcgtttgaaccagtctcgttcgctccgtgcacccccttgtg-ggaaaggggtgtgtcacaagtaactttgccaaa 29165106  T
Q  201 cgtggtgtttgagctttggattgtattgaacctaagtaaatgggccaaa 249  Q
    ||||||||||| ||||||| ||||||||  ||||| |||||||| ||||    
T  29165107 cgtggtgtttgggctttgggttgtattgggcctaaataaatgggtcaaa 29165155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 1 - 273
Target Start/End: Complemental strand, 30770327 - 30770057
Alignment:
Q  1 tatttatagaggtggagggctgcagagccgttgcggtggcacacctgactctggcggttacgaaatcatgggaagtgtaaccgccagagagtttattgtg 100  Q
    ||||||||||||||||| |||||||||||||||   ||||||||||| ||||||||||||||||||| ||| ||||||||| |||| ||||||||||| |    
T  30770327 tatttatagaggtggagtgctgcagagccgttgtaatggcacacctggctctggcggttacgaaatcgtggaaagtgtaactgccaaagagtttattgcg 30770228  T
Q  101 ggaacgtgcaaagagacgttatggttcgtttgaaccagtctctttcgctctgtgcacccccttgtgtggaaaggagtgtgtcgcaagtaactttgccaaa 200  Q
    |||||||| | ||||||||| | ||||||||||||||||| ||||||||| |||||||||||||||||| |||| |||||||||||||||||| | ||||    
T  30770227 ggaacgtgtagagagacgttgt-gttcgtttgaaccagtccctttcgctccgtgcacccccttgtgtgg-aaggggtgtgtcgcaagtaacttcgtcaaa 30770130  T
Q  201 cgtggtgtttgagctttggattgtattgaacctaagtaaatgggccaaagatccttttggtcggtcgagaaca 273  Q
    |||| |||||| |||||| |||||||||  |||||||||||||  ||||| ||||||||| ||||| ||||||    
T  30770129 cgtgatgtttgggctttgaattgtattgggcctaagtaaatggttcaaaggtccttttggccggtccagaaca 30770057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 1 - 273
Target Start/End: Original strand, 18153187 - 18153459
Alignment:
Q  1 tatttatagaggtggagggctgcagagccgttgcggtggcacacctgactctggcggttacgaaatcatgggaagtgtaaccgccagagagtttattgtg 100  Q
    ||||||||||||||||||||||| ||| |||||   ||||||| || |||||| ||||||||||||  ||||||||||||||||| | ||||||||||||    
T  18153187 tatttatagaggtggagggctgccgagtcgttgtaatggcacagcttactctgacggttacgaaatggtgggaagtgtaaccgcctgcgagtttattgtg 18153286  T
Q  101 ggaacgtgcaaagagacgttatggttcgtttgaaccagtctctttcgctctgtgca-cccccttgtgtggaaaggagtgtgtcgcaagtaactttgccaa 199  Q
    |||||||| |||||||||||  ||||||||||||||||||||||| | || ||||| |||||| | |||| |||| ||||||||| ||||| ||||||||    
T  18153287 ggaacgtggaaagagacgttggggttcgtttgaaccagtctcttttgttccgtgcacccccctcgcgtgg-aaggggtgtgtcgcgagtaattttgccaa 18153385  T
Q  200 acgtggtgtttgagctttggattgtattgaacctaagtaaatgggccaaagatccttttggtcggtcgagaaca 273  Q
    || ||||||||| |||||| | |||||||  |||||||||||||||||||||||||||||| ||||| ||||||    
T  18153386 acatggtgtttgggctttgtagtgtattgggcctaagtaaatgggccaaagatccttttggccggtccagaaca 18153459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 1 - 262
Target Start/End: Complemental strand, 47295822 - 47295562
Alignment:
Q  1 tatttatagaggtggagggctgcagagccgttgcggtggcacacctgactctggcggttacgaaatcatgggaagtgtaaccgccagagagtttattgtg 100  Q
    |||||||||||||||||||||||||||||||||   |||||||||| |||||| ||||||||||||| |||||||||||| |||  | |||||||||| |    
T  47295822 tatttatagaggtggagggctgcagagccgttgtaatggcacaccttactctgacggttacgaaatcgtgggaagtgtaaacgcttgtgagtttattgcg 47295723  T
Q  101 ggaacgtgcaaagagacgttatggttcgtttgaaccagtctctttcgctctgtgcacccccttgtgtggaaaggagtgtgtcgcaagtaactttgccaaa 200  Q
    |||| ||| | |||||||||  |||||||||||||||||||| |||| || ||||||||||| | |||||| || ||||||||| ||||| ||| |||||    
T  47295722 ggaaggtggagagagacgttggggttcgtttgaaccagtctccttcgttccgtgcaccccctcgcgtggaatgg-gtgtgtcgcgagtaatttttccaaa 47295624  T
Q  201 cgtggtgtttgagctttggattgtattgaacctaagtaaatgggccaaagatccttttggtc 262  Q
    ||||||||||| |||||| | ||||||| ||||||||||||||| |||||||||||||||||    
T  47295623 cgtggtgtttgggctttgtagtgtattggacctaagtaaatgggtcaaagatccttttggtc 47295562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 1 - 273
Target Start/End: Original strand, 22705658 - 22705929
Alignment:
Q  1 tatttatagaggtggagggctgcagagccgttgcggtggcacacctgactctggcggttacgaaatcatgggaagtgtaaccgccagagagtttattgtg 100  Q
    |||||||||||||||||| |||||||||| |||   ||||||||||| |||||||||||||||||||||||||||||||||||  ||||| |||||||      
T  22705658 tatttatagaggtggaggactgcagagccattgtaatggcacacctggctctggcggttacgaaatcatgggaagtgtaaccggtagagaatttattgca 22705757  T
Q  101 ggaacgtgcaaagagacgttatggttcgtttgaaccagtctctttcgctctgtgcaccc-ccttgtgtggaaaggagtgtgtcgcaagtaactttgccaa 199  Q
    |||||||||| ||| ||||| |||||||||||||| |||||||||||||| |||||||| |||||  ||| |||| |||||| ||||||||||||| |||    
T  22705758 ggaacgtgcagagaaacgttgtggttcgtttgaactagtctctttcgctccgtgcacccgccttgcatgg-aaggggtgtgttgcaagtaactttgtcaa 22705856  T
Q  200 acgtggtgtttgagctttggattgtattgaacctaagtaaatgggccaaagatccttttggtcggtcgagaaca 273  Q
    |||||||||| || |||||||||||||||  |||||||||||||| ||||  ||||||||  ||||| ||||||    
T  22705857 acgtggtgttgga-ctttggattgtattgggcctaagtaaatgggtcaaatgtccttttgaccggtctagaaca 22705929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 3 - 276
Target Start/End: Complemental strand, 9549107 - 9548825
Alignment:
Q  3 tttatagaggtggagggctgcagagccgttgcggtggcacacctgactctggcggttacgaaatcatgggaagtgtaaccgccagagagtttattgtggg 102  Q
    |||||| ||||||||||||||||||||||||  | |||||||||| |||| |||||||||||||| |||||||||||||||||||||||||||||| |||    
T  9549107 tttataaaggtggagggctgcagagccgttgtagaggcacacctggctctagcggttacgaaatcgtgggaagtgtaaccgccagagagtttattgcggg 9549008  T
Q  103 aacgtgcaaagagacgttatggttcgtttgaaccagtctctttcgctctgtg---------cacccccttgtgtggaaaggagtgtgtcgcaagtaactt 193  Q
    |||||||| ||||||||| || ||||||||||||||||||  | ||||  ||         | |||||||||| | ||||| |||||||||||||||||     
T  9549007 aacgtgcagagagacgttgtgtttcgtttgaaccagtctcgcttgctccatgccccccccccccccccttgtgggtaaaggggtgtgtcgcaagtaacta 9548908  T
Q  194 tgccaaacgtggtgtttgagctttggattgtattgaacctaagtaaatgggccaaagatccttttggtcggtcgagaacagta 276  Q
    | |||||||||| ||||| ||||||||||||||||   ||| |||||||||||||| |||||||||| ||||| |||||||||    
T  9548907 taccaaacgtggcgtttgggctttggattgtattgggactacgtaaatgggccaaacatccttttggccggtccagaacagta 9548825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 1 - 259
Target Start/End: Original strand, 7595408 - 7595670
Alignment:
Q  1 tatttatagaggtggagggctgcagagccgttgcggtggcacacctgactctggcggttacgaaatcatgggaagtgtaaccgccagagagtttattgtg 100  Q
    |||||||||||||||||||||||| ||||||||   | ||||||||| | ||||  ||||||||||| |||||||||||||||||||||||||||||| |    
T  7595408 tatttatagaggtggagggctgcaaagccgttgtaatagcacacctggcgctggatgttacgaaatcgtgggaagtgtaaccgccagagagtttattgcg 7595507  T
Q  101 ggaacgtgcaaagagacgttatggttcgtttgaaccagtctctttcgctctgtgca---cccccttgtgt-ggaaaggagtgtgtcgcaagtaactttgc 196  Q
    |||||||||| |||||| || ||||||||||||||| |||||  |||||| |||||   ||||||  ||| || |||| |||||| |||||||| |||||    
T  7595508 ggaacgtgcagagagacattgtggttcgtttgaaccggtctcgctcgctccgtgcacccccccctcctgtggggaaggggtgtgttgcaagtaagtttgc 7595607  T
Q  197 caaacgtggtgtttgagctttggattgtattgaacctaagtaaatgggccaaagatccttttg 259  Q
    ||| |||||||||| ||||||| |||||||||  ||| |||||||||||||||||||||||||    
T  7595608 caagcgtggtgtttaagctttgaattgtattgggcctgagtaaatgggccaaagatccttttg 7595670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 1 - 249
Target Start/End: Original strand, 21802509 - 21802757
Alignment:
Q  1 tatttatagaggtggagggctgcagagccgttgcggtggcacacctgactctggcggttacgaaatcatgggaagtgtaaccgccagagagtttattgtg 100  Q
    ||||||||||||| ||||||| |||||||||||   ||||||||||| |||||| |||||||||||| | ||||||||||| || ||||||||||||| |    
T  21802509 tatttatagaggttgagggctacagagccgttgtaatggcacacctggctctggtggttacgaaatcgtaggaagtgtaacagcgagagagtttattgcg 21802608  T
Q  101 ggaacgtgcaaagagacgttatggttcgtttgaaccagtctctttcgctctgtgca-cccccttgtgtggaaaggagtgtgtcgcaagtaactttgccaa 199  Q
     |||| |||| ||||||||| |||||||| |||||||||||| ||||||| ||||| |||||||| |||| |||| |||||| | ||||||||||| |||    
T  21802609 agaacctgcagagagacgttgtggttcgtctgaaccagtctccttcgctccgtgcaccccccttgcgtgg-aaggcgtgtgttgaaagtaactttgacaa 21802707  T
Q  200 acgtggtgtttgagctttggattgtattgaacctaagtaaatgggccaaa 249  Q
    |||||||||||||||||| |||||||||   |||||||||||| ||||||    
T  21802708 acgtggtgtttgagctttagattgtattcggcctaagtaaatgagccaaa 21802757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 1 - 273
Target Start/End: Complemental strand, 21593018 - 21592744
Alignment:
Q  1 tatttatagaggtggagggctgcagagccgttgcggtggcacacctgactctggcggttacgaaatcatgggaagtgtaaccgccagagagtttattgtg 100  Q
    ||||||||||||||||||||||| |||||||||   |||||||||| |||||| ||||||| ||||| ||||||||||||||| | |  || |||||  |    
T  21593018 tatttatagaggtggagggctgctgagccgttgtaatggcacaccttactctgacggttacaaaatcgtgggaagtgtaaccgtctgttagcttattacg 21592919  T
Q  101 ggaacgtgcaaagagacgttatggttcgtttgaaccagtctctttcgctctgtgcaccccc---ttgtgtggaaaggagtgtgtcgcaagtaactttgcc 197  Q
    |||||||| |||||||||||  ||||||||||||||||||||||||| || ||||||||||   | | |||||| || ||||||||| ||||| || |||    
T  21592918 ggaacgtggaaagagacgttggggttcgtttgaaccagtctctttcgttccgtgcacccccccctcgcgtggaaggg-gtgtgtcgcgagtaatttagcc 21592820  T
Q  198 aaacgtggtgtttgagctttggattgtattgaacctaagtaaatgggccaaagatccttttggtcggtcgagaaca 273  Q
    |||| |||||||||  |||||||| ||||||  ||||||| |||||||||||||| ||||||| ||||| ||||||    
T  21592819 aaacatggtgtttggactttggatggtattgggcctaagtgaatgggccaaagattcttttggccggtccagaaca 21592744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 5 - 276
Target Start/End: Complemental strand, 2250128 - 2249857
Alignment:
Q  5 tatagaggtggagggctgcagagccgttgcggtggcacacctgactctggcggttacgaaatcatgggaagtgtaaccgccagagagtttattgtgggaa 104  Q
    ||||||||||||||| |||||||||||||   ||||||||| | || |||||||||| ||||| |||||| ||||||||| |||||  |||||| |||||    
T  2250128 tatagaggtggagggttgcagagccgttgtaatggcacaccaggctttggcggttacaaaatcgtgggaattgtaaccgctagagatattattgcgggaa 2250029  T
Q  105 cgtgcaaagagacgttatggttcgtttgaaccagtctctttcgctctgtgca-cccccttgtgtggaaaggagtgtgtcgcaagtaactttgccaaacgt 203  Q
    |||||| ||||||||| ||||||||||||||||||||   | |||| ||||| |||||||| | || |||| |||||||||||||||  |||||||||||    
T  2250028 cgtgcagagagacgttgtggttcgtttgaaccagtcttgcttgctccgtgcaccccccttgcg-gggaaggggtgtgtcgcaagtaatgttgccaaacgt 2249930  T
Q  204 ggtgtttgagctttggattgtattgaacctaagtaaatgggccaaagatccttttggtcggtcgagaacagta 276  Q
    ||| ||||||||||| |||||||||    ||||||||| || ||||| |||||||||| |||| |||||||||    
T  2249929 ggtatttgagctttgaattgtattgggaataagtaaataggtcaaagctccttttggttggtccagaacagta 2249857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 5 - 259
Target Start/End: Original strand, 38612620 - 38612874
Alignment:
Q  5 tatagaggtggagggctgcagagccgttgcggtggcacacctgactctggcggttacgaaatcatgggaagtgtaaccgccagagagtttattgtgggaa 104  Q
    |||||||||||||  ||||||||||||||   ||| ||||| | ||||||||||||| ||||| ||||||||||||| ||||||||| ||||||||||||    
T  38612620 tatagaggtggagatctgcagagccgttgtaatggtacaccaggctctggcggttacaaaatcgtgggaagtgtaactgccagagagattattgtgggaa 38612719  T
Q  105 cgtgcaaagagacgttatggttcgtttgaaccagtctctttcgctctgtgc-acccccttgtgtggaaaggagtgtgtcgcaagtaactttgccaaacgt 203  Q
    |||||| || |||||| ||||||||||||||| | |    | |||| |||| ||||||| | | || |||| |||| | ||||||||  |||||||||||    
T  38612720 cgtgcagagggacgttgtggttcgtttgaaccggccctgcttgctccgtgcaaccccctcgcgagg-aaggggtgttttgcaagtaatgttgccaaacgt 38612818  T
Q  204 ggtgtttgagctttggattgtattgaacctaagtaaatgggccaaagatccttttg 259  Q
    |||||||| |||||| || ||||||| |||||||||||||| ||||| ||||||||    
T  38612819 ggtgtttgggctttgaatagtattgagcctaagtaaatgggtcaaagctccttttg 38612874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 8 - 243
Target Start/End: Complemental strand, 30765114 - 30764879
Alignment:
Q  8 agaggtggagggctgcagagccgttgcggtggcacacctgactctggcggttacgaaatcatgggaagtgtaaccgccagagagtttattgtgggaacgt 107  Q
    ||||||||||||||||||||| ||||  |||||||||||   || | ||| ||||||||| ||||||||||||||||||||||  | |||| ||||| ||    
T  30765114 agaggtggagggctgcagagctgttgtagtggcacacctaggtccgacgggtacgaaatcgtgggaagtgtaaccgccagagaaataattgcgggaatgt 30765015  T
Q  108 gcaaagagacgttatggttcgtttgaaccagtctctttcgctctgtgcac-ccccttgtgtggaaaggagtgtgtcgcaagtaactttgccaaacgtggt 206  Q
    |||||||||| || ||||||| |||||||||||    | ||||||||||| ||||| | | |  |||| || |||||||||||| ||||||||||||||     
T  30765014 gcaaagagacattgtggttcgcttgaaccagtcctgcttgctctgtgcactcccctcgcg-gtgaaggggtatgtcgcaagtaaatttgccaaacgtgga 30764916  T
Q  207 gtttgagctttggattgtattgaacctaagtaaatgg 243  Q
    |||| ||||| ||||||||||| ||||||||||||||    
T  30764915 gtttaagcttgggattgtattggacctaagtaaatgg 30764879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 76 - 276
Target Start/End: Complemental strand, 21801911 - 21801711
Alignment:
Q  76 tgtaaccgccagagagtttattgtgggaacgtgcaaagagacgttatggttcgtttgaaccagtctctttcgctctgtgcacccccttgtgtggaaagga 175  Q
    |||||||||||||||  |||||| ||||||||||| ||||||||| ||||||||||||| | ||||   ||||||  | ||||||| |    ||| ||||    
T  21801911 tgtaaccgccagagaacttattgcgggaacgtgcagagagacgttgtggttcgtttgaatcggtcttgctcgctccttacaccccccttgcaggagagga 21801812  T
Q  176 gtgtgtcgcaagtaactttgccaaacgtggtgtttgagctttggattgtattgaacctaagtaaatgggccaaagatccttttggtcggtcgagaacagt 275  Q
    |||||| |||||||| ||| |||||||||||||||| | ||| ||| ||||||  |||||||||||||||||||||||||||||| ||||| |||| |||    
T  21801811 gtgtgttgcaagtaagttttccaaacgtggtgtttgggttttagatagtattgggcctaagtaaatgggccaaagatccttttggccggtccagaatagt 21801712  T
Q  276 a 276  Q
    |    
T  21801711 a 21801711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 12 - 147
Target Start/End: Original strand, 18185694 - 18185829
Alignment:
Q  12 gtggagggctgcagagccgttgcggtggcacacctgactctggcggttacgaaatcatgggaagtgtaaccgccagagagtttattgtgggaacgtgcaa 111  Q
    |||||||||||||||||||||     ||||||||| |||||| |||||||||||||  |||||||||||||||  | |||||||||| |||||| || ||    
T  18185694 gtggagggctgcagagccgttttaacggcacaccttactctgacggttacgaaatcgcgggaagtgtaaccgcttgcgagtttattgcgggaacatggaa 18185793  T
Q  112 agagacgttatggttcgtttgaaccagtctctttcg 147  Q
    |||||||||  |||||||||||||||||||||||||    
T  18185794 agagacgttggggttcgtttgaaccagtctctttcg 18185829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 28794151 - 28794078
Alignment:
Q  18 ggctgcagagccgttgcggtggcacacctgactctggcggttacgaaatcatgggaagtgtaaccgccagagag 91  Q
    ||||||| ||||||||   |||||||| ||  |||| ||||||||||||| |||||||||||||||||||||||    
T  28794151 ggctgcatagccgttgtaatggcacacgtgtgtctgacggttacgaaatcgtgggaagtgtaaccgccagagag 28794078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 22703955 - 22704001
Alignment:
Q  1 tatttatagaggtggagggctgcagagccgttgcggtggcacacctg 47  Q
    |||||||||||||||||||||||||||||||||   |||||||||||    
T  22703955 tatttatagaggtggagggctgcagagccgttgtaatggcacacctg 22704001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 179 - 259
Target Start/End: Complemental strand, 40635598 - 40635520
Alignment:
Q  179 tgtcgcaagtaactttgccaaacgtggtgtttgagctttggattgtattgaacctaagtaaatgggccaaagatccttttg 259  Q
    |||||| ||||| ||||||||||||||||||||| ||||||||  |||||   |||||| |||||| ||||||||||||||    
T  40635598 tgtcgcgagtaattttgccaaacgtggtgtttga-ctttggatgatattgggtctaagtgaatggg-caaagatccttttg 40635520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 148; Significance: 7e-78; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 148; E-Value: 7e-78
Query Start/End: Original strand, 1 - 273
Target Start/End: Complemental strand, 29095158 - 29094885
Alignment:
Q  1 tatttatagaggtggagggctgcagagccgttgcggtggcacacctgactctggcggttacgaaatcatgggaagtgtaaccgccagagagtttattgtg 100  Q
    |||||||||||||||||||||||||||||||||   |||||||||| |||||| ||||||||||||| ||||||||||||||||| | |||||||||| |    
T  29095158 tatttatagaggtggagggctgcagagccgttgtaatggcacacctaactctgacggttacgaaatcgtgggaagtgtaaccgcctgtgagtttattgcg 29095059  T
Q  101 ggaacgtgcaaagagacgttatggttcgtttgaaccagtctctttcgctctgtgca--cccccttgtgtggaaaggagtgtgtcgcaagtaactttgcca 198  Q
    |||||||| |||||||||||  |||||||||||||| |||||||||| || |||||  |||||| | |||| |||| ||||||||| ||||| |||||||    
T  29095058 ggaacgtggaaagagacgttggggttcgtttgaaccggtctctttcgttccgtgcaccccccctcgcgtgg-aaggggtgtgtcgcgagtaattttgcca 29094960  T
Q  199 aacgtggtgtttgagctttggattgtattgaacctaagtaaatgggccaaagatccttttggtcggtcgagaaca 273  Q
    ||||||||||||| ||||||||| ||||||  ||||||| ||||||||||||||| |||||||||||| ||||||    
T  29094959 aacgtggtgtttgggctttggatggtattgggcctaagtgaatgggccaaagatctttttggtcggtccagaaca 29094885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 1 - 273
Target Start/End: Original strand, 23574453 - 23574724
Alignment:
Q  1 tatttatagaggtggagggctgcagagccgttgcggtggcacacctgactctggcggttacgaaatcatgggaagtgtaaccgccagagagtttattgtg 100  Q
    ||||||||||||| |||||||||||||||||||   |||||||| || ||||||| |||||||| || ||| |||||||||| ||||||||||||||| |    
T  23574453 tatttatagaggtagagggctgcagagccgttgtaatggcacacttggctctggctgttacgaagtcgtggaaagtgtaaccaccagagagtttattgcg 23574552  T
Q  101 ggaacgtgcaaagagacgttatggttcgtttgaaccagtctctttcgctctgtgcacccccttgtgtggaaaggagtgtgtcgcaagtaactttgccaaa 200  Q
     |||| || | ||||||||| ||||||||||||||||||||| ||||||| |||||| |||||||| ||||||| |||| || |||||||||||| ||||    
T  23574553 agaacatgtagagagacgttgtggttcgtttgaaccagtctcgttcgctccgtgcacgcccttgtg-ggaaaggggtgtatcacaagtaactttgtcaaa 23574651  T
Q  201 cgtggtgtttgagctttggattgtattgaacctaagtaaatgggccaaagatccttttggtcggtcgagaaca 273  Q
    ||||||||||| ||||||||||||||||  |||||||||||||||||||| ||||||||| ||||| ||||||    
T  23574652 cgtggtgtttgggctttggattgtattgggcctaagtaaatgggccaaaggtccttttgggcggtccagaaca 23574724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 138; E-Value: 7e-72
Query Start/End: Original strand, 1 - 273
Target Start/End: Complemental strand, 15119861 - 15119590
Alignment:
Q  1 tatttatagaggtggagggctgcagagccgttgcggtggcacacctgactctggcggttacgaaatcatgggaagtgtaaccgccagagagtttattgtg 100  Q
    ||||||||||||||||| | |||||||||  ||   ||||||||||| ||||||||||||| ||||| |||||||| ||||||| ||||||||||||| |    
T  15119861 tatttatagaggtggagagttgcagagccagtgtaatggcacacctggctctggcggttacaaaatcgtgggaagtataaccgctagagagtttattgcg 15119762  T
Q  101 ggaacgtgcaaagagacgttatggttcgtttgaaccagtctctttcgctctgtgcac-ccccttgtgtggaaaggagtgtgtcgcaagtaactttgccaa 199  Q
    |||||||||| ||||||||| ||||||||||||||| ||||||||| |||||||||| |||||||||||| |||| |||||||  ||||||||||| |||    
T  15119761 ggaacgtgcagagagacgttgtggttcgtttgaacctgtctctttcactctgtgcaccccccttgtgtgg-aaggggtgtgtcataagtaactttgtcaa 15119663  T
Q  200 acgtggtgtttgagctttggattgtattgaacctaagtaaatgggccaaagatccttttggtcggtcgagaaca 273  Q
    |||||||||||| ||| ||||||||||||  |||||||||||||||| ||| ||||||||| ||||| ||||||    
T  15119662 acgtggtgtttgggctctggattgtattgggcctaagtaaatgggcc-aaggtccttttggccggtccagaaca 15119590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 1 - 276
Target Start/End: Original strand, 18736059 - 18736334
Alignment:
Q  1 tatttatagaggtggagggctgcagagccgttgcggtggcacacctgactctggcggttacgaaatcatgggaagtgtaaccgccagagagtttattgtg 100  Q
    ||||||||||||||||||||||| |||||||||   ||||||||||| ||||||||||||||||||  |||||||| ||| ||||||||||||||||| |    
T  18736059 tatttatagaggtggagggctgctgagccgttgtaatggcacacctggctctggcggttacgaaattgtgggaagtctaatcgccagagagtttattgcg 18736158  T
Q  101 ggaacgtgcaaagagacgttatggttcgtttgaaccagtctctttcgctctgtgcacccc-cttgtgtggaaaggagtgtgtcgcaagtaactttgccaa 199  Q
    |||||||| | ||||||||| ||| |||||||||||| ||||  |||||| ||||||||| |||| | ||||||| || | | |||||||| ||||||||    
T  18736159 ggaacgtgtagagagacgttgtggctcgtttgaaccaatctcgctcgctccgtgcacccctcttgcg-ggaaaggggtatattgcaagtaagtttgccaa 18736257  T
Q  200 acgtggtgtttgagctttggattgtattgaacctaagtaaatgggccaaagatccttttggtcggtcgagaacagta 276  Q
    |||||||||||| |||||||||  |||||  ||||||||||||||||||| |||||||||| ||||| |||||||||    
T  18736258 acgtggtgtttgggctttggatattattgggcctaagtaaatgggccaaaaatccttttggccggtccagaacagta 18736334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 1 - 273
Target Start/End: Original strand, 4409255 - 4409528
Alignment:
Q  1 tatttatagaggtggagggctgcagagccgttgcggtggcacacctgactctggcggttacgaaatcatgggaagtgtaaccgccagagagtttattgtg 100  Q
    |||||||||||||||||||||||| ||||||| |  ||||||||||  ||||||||||||| ||||| || ||||||||||||| || | |||||||| |    
T  4409255 tatttatagaggtggagggctgcaaagccgttacaatggcacaccttgctctggcggttacaaaatcgtgagaagtgtaaccgctagggcgtttattgcg 4409354  T
Q  101 ggaacgtgcaaagagacgttatggttcgtttgaaccagtctctttcgctctgtgca-cccccttgtgtggaaaggagtgtgtcgcaagtaactttgccaa 199  Q
    |||||||||| ||||||||| ||||||||||||||||||||||||||||| ||||| |||||||| || |||||| ||||||| |||||||||||| |||    
T  4409355 ggaacgtgcatagagacgttgtggttcgtttgaaccagtctctttcgctccgtgcaccccccttgcgt-gaaaggggtgtgtcacaagtaactttgtcaa 4409453  T
Q  200 acgtggtg-tttgagctttggattgtattgaacctaagtaaatgggccaaagatccttttggtcggtcgagaaca 273  Q
    |||||||| |||| |||||| ||  |||||  |||||||||||||||||||  ||||||||| || |||||||||    
T  4409454 acgtggtgttttgggctttgaatgatattgggcctaagtaaatgggccaaatgtccttttggccgatcgagaaca 4409528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 1 - 273
Target Start/End: Original strand, 8306119 - 8306390
Alignment:
Q  1 tatttatagaggtggagggctgcagagccgttgcggtggcacacctgactctggcggttacgaaatcatgggaagtgtaaccgccagagagtttattgtg 100  Q
    ||||||||||||||||||| |||||||||||||   |||||||||||||||| || |||| |||||||||| |||||||||||||||||||||||||| |    
T  8306119 tatttatagaggtggagggttgcagagccgttgtaatggcacacctgactctagcagttatgaaatcatggaaagtgtaaccgccagagagtttattgcg 8306218  T
Q  101 ggaacgtgcaaagagacgttatggttcgtttgaaccagtctctttcgctctgtgcacccccttgtgtggaaaggagtgtgtcgcaagtaactttgccaaa 200  Q
    ||||| | || ||||||||| ||  ||||||||||||||||||||||||||||||||| |||||| | |||||| |  ||| ||||||||||||| ||||    
T  8306219 ggaacctacagagagacgttgtgactcgtttgaaccagtctctttcgctctgtgcacctccttgtct-gaaagggggatgttgcaagtaactttgtcaaa 8306317  T
Q  201 cgtggtgtttgagctttggattgtattgaacctaagtaaatgggccaaagatccttttggtcggtcgagaaca 273  Q
    |||| |||||| ||||| ||| ||||||  |||||||| ||||||||||  ||||||||  ||||| ||||||    
T  8306318 cgtgatgtttgggctttagatcgtattgggcctaagtatatgggccaaatgtccttttgaccggtccagaaca 8306390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 5 - 275
Target Start/End: Original strand, 14910669 - 14910938
Alignment:
Q  5 tatagaggtggagggctgcagagccgttgcggtggcacacctgactctggcggttacgaaatcatgggaagtgtaaccgccagagagtttattgtgggaa 104  Q
    |||||||||||||||||||| ||||||||   |||||||| |  ||||||| ||||||||||  |||||||||||||||||| ||||||||||| |||||    
T  14910669 tatagaggtggagggctgcaaagccgttgtaatggcacacatcgctctggcagttacgaaattgtgggaagtgtaaccgccatagagtttattgcgggaa 14910768  T
Q  105 cgtgcaaagagacgttatggttcgtttgaaccagtctctttcgctctgtgcacccccttgtgtggaaaggagtgtgtcgcaagtaactttgccaaacgtg 204  Q
    |||||| ||||||||| ||||||||||||||| ||||   |||||| |||||||||| | || || |||| ||||||||||| |||  |||||||| |||    
T  14910769 cgtgcagagagacgttgtggttcgtttgaaccggtcttgctcgctccgtgcacccccatttg-gggaaggggtgtgtcgcaaataatgttgccaaatgtg 14910867  T
Q  205 gtgtttgagctttggattgtattgaacctaagtaaatgggccaaagatccttttggtcggtcgagaacagt 275  Q
    |||||||  ||||||||| |||||  ||||||||||||||| |||| ||||||||| ||||| ||||||||    
T  14910868 gtgtttggactttggattctattgtgcctaagtaaatgggcaaaaggtccttttggccggtccagaacagt 14910938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 1 - 260
Target Start/End: Original strand, 29482650 - 29482909
Alignment:
Q  1 tatttatagaggtggagggctgcagagccgttgcggtggcacacctgactctggcggttacgaaatcatgggaagtgtaaccgccagagagtttattgtg 100  Q
    |||||||||||||||||||||| |||| |||||   |||||||||||  ||| |||||||||||||| |||||||| |||| |  ||||||||||||| |    
T  29482650 tatttatagaggtggagggctgtagagtcgttgtaatggcacacctggttctagcggttacgaaatcgtgggaagtataactgtgagagagtttattgcg 29482749  T
Q  101 ggaacgtgcaaagagacgttatggttcgtttgaaccagtctctttcgctctgtgcacccccttgtgtggaaaggagtgtgtcgcaagtaactttgccaaa 200  Q
    ||||| |||| ||||||||| ||| ||||||||||| |||||  |||||| ||||| | | ||||| | ||||| |||||||||||||||  ||||||||    
T  29482750 ggaacatgcagagagacgttgtggctcgtttgaaccggtctcgctcgctccgtgcagcactttgtgggaaaaggggtgtgtcgcaagtaatgttgccaaa 29482849  T
Q  201 cgtggtgtttgagctttggattgtattgaacctaagtaaatgggccaaagatccttttgg 260  Q
    ||||| ||||| |||||||||||| |||  ||| ||||||||||||||||||||||||||    
T  29482850 cgtggcgtttgggctttggattgtgttgggcctgagtaaatgggccaaagatccttttgg 29482909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 19 - 275
Target Start/End: Complemental strand, 17757140 - 17756884
Alignment:
Q  19 gctgcagagccgttgcggtggcacacctgactctggcggttacgaaatcatgggaagtgtaaccgccagagagtttattgtgggaacgtgcaaagagacg 118  Q
    ||||| |||||||||   |||||||||| |||||| ||||||| ||||| ||||||||||||||||| | |||||||||||||||||||| |||||||||    
T  17757140 gctgccgagccgttgtaatggcacaccttactctgacggttacaaaatcgtgggaagtgtaaccgcctgtgagtttattgtgggaacgtggaaagagacg 17757041  T
Q  119 ttatggttcgtttgaaccagtctctttcgctctgtgca-cccccttgtgtggaaaggagtgtgtcgcaagtaactttgccaaacgtggtgtttgagcttt 217  Q
    ||  ||||||||||||||| ||| ||||| || ||||| |||||| | |||| |||| ||||||||| ||||| |||||||||||||||||||| |||||    
T  17757040 ttggggttcgtttgaaccaatctttttcgttccgtgcacccccctcgcgtgg-aaggggtgtgtcgcgagtaattttgccaaacgtggtgtttgggcttt 17756942  T
Q  218 ggattgtattgaacctaagtaaatgggccaaagatccttttggtcggtcgagaacagt 275  Q
     |||||||||   |||||||||||| | ||||||||||||||| |||||  |||||||    
T  17756941 cgattgtattaggcctaagtaaatgtgtcaaagatccttttggccggtcccgaacagt 17756884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 5 - 275
Target Start/End: Complemental strand, 15349765 - 15349494
Alignment:
Q  5 tatagaggtggagggctgcagagccgttgcggtggcacacctgactctggcggttacgaaatcatgggaagtgtaaccgccagagagtttattgtgggaa 104  Q
    ||||||||||||||||||||||||||||| | | |||||||||  |||||||||||||||||| |||||||||||||||| |||||| ||||||||||||    
T  15349765 tatagaggtggagggctgcagagccgttgtgatagcacacctgggtctggcggttacgaaatcgtgggaagtgtaaccgcgagagagattattgtgggaa 15349666  T
Q  105 cgtgcaaagagacgttatggttcg-tttgaaccagtctctttcgctctgtgcaccccct-tgtgtggaaaggagtgtgtcgcaagtaactttgccaaacg 202  Q
    |||||||||||| ||| ||||||| |||||||| ||||     ||||||||||||||||  | |  | |||| |||||| ||||||||  |||||||||     
T  15349665 cgtgcaaagagatgttgtggttcgttttgaaccggtcttgcatgctctgtgcaccccctccgcgatggaagg-gtgtgttgcaagtaatattgccaaaca 15349567  T
Q  203 tggtgtttgagctttggattgtattgaacctaagtaaatgggccaaagatccttttggtcggtcgagaacagt 275  Q
    |||||||||| ||||||||||||| |  |||||||||| ||||| ||||||||||||  ||||| ||||||||    
T  15349566 tggtgtttgatctttggattgtatcgggcctaagtaaacgggcctaagatccttttgaccggtccagaacagt 15349494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 1 - 260
Target Start/End: Original strand, 18728980 - 18729239
Alignment:
Q  1 tatttatagaggtggagggctgcagagccgttgcggtggcacacctgactctggcggttacgaaatcatgggaagtgtaaccgccagagagtttattgtg 100  Q
    ||||||||||||||||||||||||||| | |||   ||| ||||||| ||||||||| ||| ||||| |||||||||||||||||| ||||||||||| |    
T  18728980 tatttatagaggtggagggctgcagagacattgtaatggaacacctggctctggcgggtacaaaatcgtgggaagtgtaaccgccatagagtttattgcg 18729079  T
Q  101 ggaacgtgcaaagagacgttatggttcgtttgaaccagtctctttcgctctgtgcaccc-ccttgtgtggaaaggagtgtgtcgcaagtaactttgccaa 199  Q
    | |||||||| ||||||||| ||| || |||||||| ||||| ||||||| |||||||| ||||| | ||||||  ||||||  ||||||| |||| |||    
T  18729080 gaaacgtgcagagagacgttgtggctcctttgaaccggtctcgttcgctccgtgcaccctccttgcg-ggaaagcggtgtgttacaagtaagtttgtcaa 18729178  T
Q  200 acgtggtgtttgagctttggattgtattgaacctaagtaaatgggccaaagatccttttgg 260  Q
    |||||||||||| | ||||||| |||||   ||||||||||||||||||||||||||||||    
T  18729179 acgtggtgtttgggttttggatagtattaggcctaagtaaatgggccaaagatccttttgg 18729239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 64 - 273
Target Start/End: Complemental strand, 21508716 - 21508507
Alignment:
Q  64 aatcatgggaagtgtaaccgccagagagtttattgtgggaacgtgcaaagagacgttatggttcgtttgaaccagtctctttcgctctgtgcaccccc-t 162  Q
    |||| |||||||||||||||||| |||||||||||  |||||||||| ||||||| | ||||||| ||||||||||||||||||||| |||||||||| |    
T  21508716 aatcgtgggaagtgtaaccgccatagagtttattgcaggaacgtgcagagagacgctgtggttcgattgaaccagtctctttcgctccgtgcacccccct 21508617  T
Q  163 tgtgtggaaaggagtgtgtcgcaagtaactttgccaaacgtggtgtttgagctttggattgtattgaacctaagtaaatgggccaaagatccttttggtc 262  Q
    ||  ||||| || |||||| ||||||||||||| ||||||||||||||||||||||||||||||||  |||||||||||||||||||| ||| ||||| |    
T  21508616 tgcatggaaggg-gtgtgttgcaagtaactttgtcaaacgtggtgtttgagctttggattgtattgggcctaagtaaatgggccaaaggtccctttggcc 21508518  T
Q  263 ggtcgagaaca 273  Q
    | || ||||||    
T  21508517 gatccagaaca 21508507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 12738554 - 12738760
Alignment:
Q  1 tatttatagaggtggagggctgcagagccgttgcggtggcacacctgactctggcggttacgaaatcatgggaagtgtaaccgccagagagtttattgtg 100  Q
    ||||||||||||||||||| |||||||||||||   ||||||| ||| || || || |||||||||| |||||||||||||| | ||||||||||||| |    
T  12738554 tatttatagaggtggagggttgcagagccgttgtaatggcacatctggctatgacgattacgaaatcgtgggaagtgtaacctctagagagtttattgcg 12738653  T
Q  101 ggaacgtgcaaagagacgttatggttcgtttgaaccagtctctttcgctctgtgca-cccccttgtgtggaaaggagtgtgtcgcaagtaactttgccaa 199  Q
    |||||||||| ||||||||| |||||||||||||| |||||  ||||||| || || |||||||||| ||||||| |||||||||| |||||||||||||    
T  12738654 ggaacgtgcagagagacgttgtggttcgtttgaactagtcttgttcgctccgtacaccccccttgtg-ggaaaggggtgtgtcgcaggtaactttgccaa 12738752  T
Q  200 acgtggtg 207  Q
    ||||||||    
T  12738753 acgtggtg 12738760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 5 - 157
Target Start/End: Complemental strand, 7968631 - 7968479
Alignment:
Q  5 tatagaggtggagggctgcagagccgttgcggtggcacacctgactctggcggttacgaaatcatgggaagtgtaaccgccagagagtttattgtgggaa 104  Q
    |||||||||||||||||||||||| ||||   ||||||||||||||||||||||||||||||  ||| ||||||||||||||| | ||||||||||||||    
T  7968631 tatagaggtggagggctgcagagctgttgtaatggcacacctgactctggcggttacgaaattgtggaaagtgtaaccgccagggggtttattgtgggaa 7968532  T
Q  105 cgtgcaaagagacgttatggttcgtttgaaccagtctctttcgctctgtgcac 157  Q
    |||||| ||||||||| |||||||||||||||||||||||||| || ||||||    
T  7968531 cgtgcagagagacgttgtggttcgtttgaaccagtctctttcgttccgtgcac 7968479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 24438702 - 24438474
Alignment:
Q  1 tatttatagaggtggagggctgcagagccgttgcggtggcacacctgactctggcggttacgaaatcatgggaagtgtaaccgccagagagtttattgtg 100  Q
    ||||||||||||| ||||  ||||||| |||||   || |||||||| |||| |||||||||||||| |||||||||||||||||| |||||| ||||      
T  24438702 tatttatagaggtagaggattgcagagtcgttgtaatgacacacctggctcttgcggttacgaaatcgtgggaagtgtaaccgccatagagttgattgca 24438603  T
Q  101 ggaacgtgcaaagagacgttatggttcgtttgaaccagtctctttcgctctgtg--cacccccttgtgtggaaaggagtgtgtcgcaagtaactttgcca 198  Q
    |||||||||||||||||| | |||||||||||||||| |||||||| | | |||  |||||||||| |||| |||| |||||| ||||||||| | ||||    
T  24438602 ggaacgtgcaaagagacgatgtggttcgtttgaaccaatctctttctccccgtgcacacccccttgcgtgg-aaggggtgtgttgcaagtaacatagcca 24438504  T
Q  199 aacgtggtgtttgagctttggattgtattg 228  Q
    || ||||||||||| |||||||||||||||    
T  24438503 aatgtggtgtttgaactttggattgtattg 24438474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 1 - 244
Target Start/End: Complemental strand, 18258735 - 18258492
Alignment:
Q  1 tatttatagaggtggagggctgcagagccgttgcggtggcacacctgactctggcggttacgaaatcatgggaagtgtaaccgccagagagtttattgtg 100  Q
    ||||||||||||| |||||||| ||||||||||  |||||||||||| |||||  |||||||||||  ||||||||||||| || | ||||||||||| |    
T  18258735 tatttatagaggtagagggctgtagagccgttgtagtggcacacctggctctgatggttacgaaattgtgggaagtgtaactgctaaagagtttattgcg 18258636  T
Q  101 ggaacgtgcaaagagacgttatggttcgtttgaaccagtctctttcgctctgtgcacccccttgtgtgga-aaggagtgtgtcgcaagtaactttgccaa 199  Q
    |||| ||||  ||||||||| |||||| |||||||| |||||  |||||  |||||||||||| |||||| || | || ||  |||||||| ||||| ||    
T  18258635 ggaatgtgcggagagacgttgtggttcctttgaaccggtctcactcgcttcgtgcaccccctt-tgtggagaaagggtatgctgcaagtaagtttgcaaa 18258537  T
Q  200 acgtggtgtttgagctttggattgtattgaacctaagtaaatggg 244  Q
    || ||||||||| ||||||||||||||||  ||||||||||||||    
T  18258536 acatggtgtttgggctttggattgtattgggcctaagtaaatggg 18258492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 5 - 266
Target Start/End: Complemental strand, 18014594 - 18014333
Alignment:
Q  5 tatagaggtggagggctgcagagccgttgcggtggcacacctgactctggcggttacgaaatcatgggaagtgtaaccgccagagagtttattgtgggaa 104  Q
    |||||||||||||||||||||||||||||   ||||||||||  ||||||||||||||||||| |||||||| ||||| |||||||| |||||| |||||    
T  18014594 tatagaggtggagggctgcagagccgttgtaatggcacacctagctctggcggttacgaaatcgtgggaagtctaaccaccagagagattattgcgggaa 18014495  T
Q  105 cgtgcaaagagacgttatggttcgtttgaaccagtctctttcgctctgtgcacccccttgtgtggaaaggagtgtgtcgcaagtaactttgccaaacgtg 204  Q
    ||| ||   | || || ||||||||||||||  ||||   |||||| |||||||||| |    || |||| || ||||||||||||  |||||| | ||     
T  18014494 cgtacagtcaaacattgtggttcgtttgaactggtcttgctcgctccgtgcacccccctcgcggggaaggggtttgtcgcaagtaatattgccacatgta 18014395  T
Q  205 gtgtttgagctttggattgtattgaacctaagtaaatgggccaaagatccttttggtcggtc 266  Q
    |||| ||  || ||||||||||||| |||||||||||||||||||| || |||||| |||||    
T  18014394 gtgtctggtctgtggattgtattgagcctaagtaaatgggccaaagctcattttggccggtc 18014333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 5 - 273
Target Start/End: Complemental strand, 15369761 - 15369492
Alignment:
Q  5 tatagaggtggagggctgcagagccgttgcggtggcacacctgactctggcggttacgaaatcatgggaagtgtaaccgccagagagtttattgtgggaa 104  Q
    |||||||||||||||||| |||| ||||  | ||| ||||||   |||||||||||||||||  | |||||||||||||||||| || |||||| |||||    
T  15369761 tatagaggtggagggctgtagagtcgttatgatggtacacctaggtctggcggttacgaaattgtaggaagtgtaaccgccagacagattattgcgggaa 15369662  T
Q  105 cgtgcaaagagacgttatggttcg-tttgaaccagtctctttcgctctgtgcaccccctt-gtgtggaaaggagtgtgtcgcaagtaactttgccaaacg 202  Q
    |||||||||||| ||| ||||||| |||||||| ||||  |  ||||  |||||| |||| | |  | |||| |||||| ||||| ||  ||||||||||    
T  15369661 cgtgcaaagagaagttgtggttcgttttgaaccggtcttgtatgctccttgcaccgccttcgcgaaggaagg-gtgtgttgcaaggaatattgccaaacg 15369563  T
Q  203 tggtgtttgagctttggattgtattgaacctaagtaaatgggccaaagatccttttggtcggtcgagaaca 273  Q
    |||||||||||||||||||| |||||  | |||||||||| ||| ||||||||||||| ||||| ||||||    
T  15369562 tggtgtttgagctttggattatattgggcttaagtaaatgcgcctaagatccttttggccggtccagaaca 15369492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 19860192 - 19860052
Alignment:
Q  1 tatttatagaggtggagggctgcagagccgttgcggtggcacacctgactctggcggttacgaaatcatgggaagtgtaaccgccagagagtttattgtg 100  Q
    ||||||||||||||||||||||| |||||||||   ||| ||||||| ||||||||||||||||||| |||||||||||||| |||||||| ||||||||    
T  19860192 tatttatagaggtggagggctgcggagccgttgtaatgggacacctggctctggcggttacgaaatcgtgggaagtgtaaccaccagagagattattgtg 19860093  T
Q  101 ggaacgtgcaaagagacgttatggttcgtttgaaccagtct 141  Q
    ||||| ||   |||||||||  |||||||||||||||||||    
T  19860092 ggaacatgttgagagacgttgcggttcgtttgaaccagtct 19860052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 179 - 271
Target Start/End: Complemental strand, 19857797 - 19857705
Alignment:
Q  179 tgtcgcaagtaactttgccaaacgtggtgtttgagctttggattgtattgaacctaagtaaatgggccaaagatccttttggtcggtcgagaa 271  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| ||||||||||||||| ||||    
T  19857797 tgtcgcaactaactttgccaaacgtggtgtttgagctttggattgtattgagcctaagtaaatgcgccaaaggtccttttggtcggtccagaa 19857705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 5 - 275
Target Start/End: Original strand, 3876381 - 3876651
Alignment:
Q  5 tatagaggtggagggctgcagagccgttgcggtggcacacctgactctggcggttacgaaatcatgggaagtgtaaccgccagagagtttattgtgggaa 104  Q
    ||||||||||||||||||||||||||||| |  | ||||||| | |||||||||||||||||| | |||||||||| || ||||||| |||||| |||||    
T  3876381 tatagaggtggagggctgcagagccgttgtgaagacacacctaagtctggcggttacgaaatcgtaggaagtgtaatcgtcagagagattattgcgggaa 3876480  T
Q  105 cgtgcaaagagacgttatggttcgtttgaaccagtctctttcgctctgtgcacccccttgtgtgga-aaggagtgtgtcgcaagtaactttgccaaacgt 203  Q
      |||||||||||||| | | || ||||||||  |||   | |||| ||||||||||||  | ||| |||| || |||| ||||||| ||||||||||||    
T  3876481 tatgcaaagagacgttgtagctcatttgaaccgatcttgcttgctccgtgcaccccctt-cgcggagaaggggtatgtcacaagtaagtttgccaaacgt 3876579  T
Q  204 ggtgtttgagctttggattgtattgaacctaagtaaatgggccaaagatccttttggtcggtcgagaacagt 275  Q
    |  ||||| |||| ||| ||| |||  ||||| ||||||| || ||  ||||||||| ||||| ||||||||    
T  3876580 gaagtttgggcttgggactgtgttgggcctaaataaatggacctaaagtccttttggccggtccagaacagt 3876651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 5 - 131
Target Start/End: Complemental strand, 15319115 - 15318989
Alignment:
Q  5 tatagaggtggagggctgcagagccgttgcggtggcacacctgactctggcggttacgaaatcatgggaagtgtaaccgccagagagtttattgtgggaa 104  Q
    ||||||||||||||||||||||| ||||| | ||| ||||||   |||||||||||||||||| |||||||||||||||| |||||| ||||||  ||||    
T  15319115 tatagaggtggagggctgcagagtcgttgtgatggtacacctaggtctggcggttacgaaatcgtgggaagtgtaaccgctagagagattattgcaggaa 15319016  T
Q  105 cgtgcaaagagacgttatggttcgttt 131  Q
    |||||||||||| ||| ||||||||||    
T  15319015 cgtgcaaagagaagttgtggttcgttt 15318989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 170 - 276
Target Start/End: Original strand, 23524248 - 23524354
Alignment:
Q  170 aaaggagtgtgtcgcaagtaactttgccaaacgtggtgtttgagctttggattgtattgaacctaagtaaatgggccaaagatccttttggtcggtcgag 269  Q
    ||||| ||||||||||||||||||||| |||||||||||||| ||||||| |||||||| ||||||||||||||||||||| ||| ||||| ||||| ||    
T  23524248 aaaggggtgtgtcgcaagtaactttgcaaaacgtggtgtttgggctttgggttgtattgtacctaagtaaatgggccaaaggtccctttggccggtccag 23524347  T
Q  270 aacagta 276  Q
    |||||||    
T  23524348 aacagta 23524354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 169 - 271
Target Start/End: Original strand, 18043505 - 18043607
Alignment:
Q  169 gaaaggagtgtgtcgcaagtaactttgccaaacgtggtgtttgagctttggattgtattgaacctaagtaaatgggccaaagatccttttggtcggtcga 268  Q
    |||||| |||| |||||||||||||||||||||||| |||||| |||||| || ||||||  |||||||||||||||||||| ||||||||| ||||| |    
T  18043505 gaaaggggtgtatcgcaagtaactttgccaaacgtgatgtttgggctttgaatggtattgggcctaagtaaatgggccaaaggtccttttggccggtcca 18043604  T
Q  269 gaa 271  Q
    |||    
T  18043605 gaa 18043607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 6 - 116
Target Start/End: Original strand, 23524128 - 23524238
Alignment:
Q  6 atagaggtggagggctgcagagccgttgcggtggcacacctgactctggcggttacgaaatcatgggaagtgtaaccgccagagagtttattgtgggaac 105  Q
    ||||| |||||||||||||||||| |||   ||||||||||| |||||||||||| |||||| ||| ||||||||||  || ||||||||||| ||||||    
T  23524128 atagacgtggagggctgcagagccattgtaatggcacacctggctctggcggttaagaaatcgtggaaagtgtaaccatcaaagagtttattgcgggaac 23524227  T
Q  106 gtgcaaagaga 116  Q
    ||||| |||||    
T  23524228 gtgcagagaga 23524238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 180 - 260
Target Start/End: Original strand, 27964962 - 27965042
Alignment:
Q  180 gtcgcaagtaactttgccaaacgtggtgtttgagctttggattgtattgaacctaagtaaatgggccaaagatccttttgg 260  Q
    ||||| ||||| ||| |||||||||||||||| |||||||||  |||||  ||||||||||||||||||||||||||||||    
T  27964962 gtcgcgagtaattttaccaaacgtggtgtttgggctttggatgatattgggcctaagtaaatgggccaaagatccttttgg 27965042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 18043399 - 18043472
Alignment:
Q  1 tatttatagaggtggagggctgcagagccgttgcggtggcacacctgactctggcggttacgaaatcatgggaa 74  Q
    |||||||||||||||||||||||| ||||||||   || ||| | |||||||||||| ||||||||||||||||    
T  18043399 tatttatagaggtggagggctgcaaagccgttgtaatgacacgcatgactctggcgggtacgaaatcatgggaa 18043472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 176 - 275
Target Start/End: Complemental strand, 15318943 - 15318845
Alignment:
Q  176 gtgtgtcgcaagtaactttgccaaacgtggtgtttgagctttggattgtattgaacctaagtaaatgggccaaagatccttttggtcggtcgagaacagt 275  Q
    |||||||||||||||  |||| |||||||||||||||| ||||||||||||||  | ||||| ||| |||| ||||||||  ||| ||||| ||||||||    
T  15318943 gtgtgtcgcaagtaatattgcaaaacgtggtgtttgag-tttggattgtattgggcttaagtcaataggcctaagatcctgctggccggtccagaacagt 15318845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 100 - 161
Target Start/End: Original strand, 14467175 - 14467236
Alignment:
Q  100 gggaacgtgcaaagagacgttatggttcgtttgaaccagtctctttcgctctgtgcaccccc 161  Q
    |||||||||  |||||||||| | ||||||||||||  |||||||| ||| |||||||||||    
T  14467175 gggaacgtgggaagagacgttgtagttcgtttgaactggtctcttttgctttgtgcaccccc 14467236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 147; Significance: 3e-77; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 1 - 259
Target Start/End: Original strand, 23495407 - 23495664
Alignment:
Q  1 tatttatagaggtggagggctgcagagccgttgcggtggcacacctgactctggcggttacgaaatcatgggaagtgtaaccgccagagagtttattgtg 100  Q
    |||||||||||||||||||||||||||||||||   |||||||||| |||||| ||||||||||||| ||||||||||||||| | | |||||||||| |    
T  23495407 tatttatagaggtggagggctgcagagccgttgtaatggcacacctaactctgacggttacgaaatcgtgggaagtgtaaccgtctgtgagtttattgcg 23495506  T
Q  101 ggaacgtgcaaagagacgttatggttcgtttgaaccagtctctttcgctctgtgcacccccttgtgtggaaaggagtgtgtcgcaagtaactttgccaaa 200  Q
    |||||||| |||||||||||  |||||||||||||| |||||||||| || ||||||||||||| |||| |||| ||||||||| ||||| ||||| |||    
T  23495507 ggaacgtggaaagagacgttggggttcgtttgaaccggtctctttcgttccgtgcacccccttgcgtgg-aaggggtgtgtcgcgagtaattttgcaaaa 23495605  T
Q  201 cgtggtgtttgagctttggattgtattgaacctaagtaaatgggccaaagatccttttg 259  Q
    ||||||||||| |||||||||  |||||| |||||||||||||| ||||||||||||||    
T  23495606 cgtggtgtttgggctttggatgatattgagcctaagtaaatgggtcaaagatccttttg 23495664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 138; E-Value: 7e-72
Query Start/End: Original strand, 1 - 273
Target Start/End: Complemental strand, 28068164 - 28067893
Alignment:
Q  1 tatttatagaggtggagggctgcagagccgttgcggtggcacacctgactctggcggttacgaaatcatgggaagtgtaaccgccagagagtttattgtg 100  Q
    |||||||||||||||||||||||||||||||||   ||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||      
T  28068164 tatttatagaggtggagggctgcagagccgttgtaatggcacacctggctctggcggttacgaaatcgtgggaagtgtaaccgccggagagtttattgca 28068065  T
Q  101 ggaacgtgcaaagagacgttatggttcgtttgaaccagtctctttcgctctgtgcacccccttgtgtggaaaggagtgtgtcgcaagtaactttgccaaa 200  Q
    |||||||||| |||||||||  || |||||||||||||||||  |||||| ||||||||||||| | | ||||||| |||| |||||||| |||||||||    
T  28068064 ggaacgtgcagagagacgttgaggctcgtttgaaccagtctcgctcgctccgtgcacccccttgcg-gaaaaggag-gtgttgcaagtaagtttgccaaa 28067967  T
Q  201 cgtggtgtttgagc-tttggattgtattgaacctaagtaaatgggccaaagatccttttggtcggtcgagaaca 273  Q
    ||||||| ||| || ||||||||||||||  | ||||||| |||| ||||||||||||||| ||||| ||||||    
T  28067966 cgtggtgcttgtgcttttggattgtattgggcgtaagtaagtgggtcaaagatccttttggccggtccagaaca 28067893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 1 - 260
Target Start/End: Original strand, 5931249 - 5931508
Alignment:
Q  1 tatttatagaggtggagggctgcagagccgttgcggtggcacacctgactctggcggttacgaaatcatgggaagtgtaaccgccagagagtttattgtg 100  Q
    |||||||||||||||||||||||||||||||||   || ||||||||  ||||||||||| |||||| ||||||||| |||||||||||||||||||| |    
T  5931249 tatttatagaggtggagggctgcagagccgttgtaatgacacacctggttctggcggttatgaaatcgtgggaagtgcaaccgccagagagtttattgcg 5931348  T
Q  101 ggaacgtgcaaagagacgttatggttcgtttgaaccagtctctttcgctctgtgca-cccccttgtgtggaaaggagtgtgtcgcaagtaactttgccaa 199  Q
    |||| ||| | ||||||||| |||||||||||||||||||||| |||||| ||||| ||||||||||||| |||| ||||||| ||||||| ||||||||    
T  5931349 ggaatgtgtagagagacgttgtggttcgtttgaaccagtctctatcgctccgtgcaccccccttgtgtgg-aaggggtgtgtcacaagtaattttgccaa 5931447  T
Q  200 acgtggtgtttgagctttggattgtattgaacctaagtaaatgggccaaagatccttttgg 260  Q
    ||| | |||||| | | ||||||||||||  |||||||||||||||||||| | |||||||    
T  5931448 acgcgatgtttgggttgtggattgtattgggcctaagtaaatgggccaaaggtacttttgg 5931508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 1 - 276
Target Start/End: Complemental strand, 20899737 - 20899462
Alignment:
Q  1 tatttatagaggtggagggctgcagagccgttgcggtggcacacctgactctggcggttacgaaatcatgggaagtgtaaccgccagagagtttattgtg 100  Q
    |||||||| |||||||||||||||||  |||||   |||||||||| |||||| ||||||||||||| ||||||||||||||||| | |||||||||| |    
T  20899737 tatttataaaggtggagggctgcagattcgttgtaatggcacacctaactctgacggttacgaaatcgtgggaagtgtaaccgcctgtgagtttattgcg 20899638  T
Q  101 ggaacgtgcaaagagacgttatggttcgtttgaaccagtctctttcgctctgtgca-cccccttgtgtggaaaggagtgtgtcgcaagtaactttgccaa 199  Q
    |||||||| |||||||||||  ||||||||||||||||||||||||| || ||||| |||||| | |||| |||| ||||||||| ||||| ||| ||||    
T  20899637 ggaacgtggaaagagacgttggggttcgtttgaaccagtctctttcgttccgtgcacccccctcgcgtgg-aaggggtgtgtcgcgagtaatttttccaa 20899539  T
Q  200 acgtggtgtttgagctttggattgtattgaacctaagtaaatgggccaaagatccttttggtcggtcgagaacagta 276  Q
    |||||||||||| ||||||||| ||| ||  | ||||| ||||||||||||||||||||||  |||| |||||||||    
T  20899538 acgtggtgtttgggctttggatggtactgggcttaagtgaatgggccaaagatccttttggctggtccagaacagta 20899462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 1 - 258
Target Start/End: Complemental strand, 36712790 - 36712534
Alignment:
Q  1 tatttatagaggtggagggctgcagagccgttgcggtggcacacctgactctggcggttacgaaatcatgggaagtgtaaccgccagagagtttattgtg 100  Q
    |||||||||||||||||||||||||||||||||   |||||||||| |||||| ||||||||||||| ||| |||||||||| || | || ||||||| |    
T  36712790 tatttatagaggtggagggctgcagagccgttgtaatggcacacctaactctgacggttacgaaatcgtggaaagtgtaaccacctgcgattttattgcg 36712691  T
Q  101 ggaacgtgcaaagagacgttatggttcgtttgaaccagtctctttcgctctgtgcacccccttgtgtggaaaggagtgtgtcgcaagtaactttgccaaa 200  Q
     ||||||| |||||||||||  ||||||||||||| ||||||||||| || ||||||||||| | |||| |||| |||||||||  |||| |||||||||    
T  36712690 agaacgtggaaagagacgttggggttcgtttgaactagtctctttcgttccgtgcaccccctagcgtgg-aaggggtgtgtcgcgggtaattttgccaaa 36712592  T
Q  201 cgtggtgtttgagctttggattgtattgaacctaagtaaatgggccaaagatcctttt 258  Q
    ||||||||||  |||||||| |||||||  |||||||||||||| |||||||||||||    
T  36712591 cgtggtgtttaggctttggagtgtattgggcctaagtaaatgggtcaaagatcctttt 36712534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 1 - 273
Target Start/End: Original strand, 8244570 - 8244846
Alignment:
Q  1 tatttatagaggtggagggctgcagagccgttgcggtggcacacc------tgactctggcggttacgaaatcatgggaagtgtaaccgccagagagttt 94  Q
    ||||||||||||||||||||||||||| ||| | | ||||||| |      || ||||||||||||||||||| ||| |||||||| ||| |||||||||    
T  8244570 tatttatagaggtggagggctgcagagtcgt-gtgatggcacatcattacatggctctggcggttacgaaatcgtggaaagtgtaatcgctagagagttt 8244668  T
Q  95 attgtgggaacgtgcaaagagacgttatggttcgtttgaaccagtctctttcgctctgtgcacccccttgtgtggaaaggagtgtgtcgcaagtaacttt 194  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| |||| |||| |||||| ||||||||||      
T  8244669 attgggggaacgtgcaaagagacgttgtggttcgtttgaaccagtctctttcgctccgtgcacccccttgcgtgg-aaggggtgtgttgcaagtaactca 8244767  T
Q  195 gccaaacgtggtgtttgagctttggattgtattgaacctaagtaaatgggccaaagatccttttggtcggtcgagaaca 273  Q
    |||||| | |||||||   |||||||||||||| | ||||||||||||||| |||  ||||||||| ||||| ||||||    
T  8244768 gccaaatgcggtgtttagactttggattgtattaagcctaagtaaatgggctaaaattccttttggccggtccagaaca 8244846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 1 - 266
Target Start/End: Complemental strand, 33622634 - 33622367
Alignment:
Q  1 tatttatagaggtggagggctgcagagccgttgcggtggcacacctgactct---ggcggttacgaaatcatgggaagtgtaaccgccagagagtttatt 97  Q
    |||||||||||||||||||||||||||||||||   |  ||||||| |||||   || |||||||||||| ||||||||||||||||| | |||||||||    
T  33622634 tatttatagaggtggagggctgcagagccgttgtaattacacaccttactctgacggtggttacgaaatcctgggaagtgtaaccgcctgtgagtttatt 33622535  T
Q  98 gtgggaacgtgcaaagagacgttatggttcgtttgaaccagtctctttcgctctgtgcacccccttgtgtggaaaggagtgtgtcgcaagtaactttgcc 197  Q
    |  |||||||  |||||||||||  ||||||||| ||||||||||||||| ||||||||||||||   |||| |||| ||||||||| ||||| ||||||    
T  33622534 gctggaacgtagaaagagacgttggggttcgtttaaaccagtctctttcgttctgtgcaccccctcacgtgg-aaggggtgtgtcgcgagtaattttgcc 33622436  T
Q  198 aaacgtggtgtttgagctttggattgtattgaacctaagtaaatgggccaaagatccttttggtcggtc 266  Q
    |||| || |||||| ||||||||||||||||  | |||||||||||| ||||||||||||||| |||||    
T  33622435 aaacatgatgtttgggctttggattgtattgggcttaagtaaatgggtcaaagatccttttggccggtc 33622367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 2 - 260
Target Start/End: Complemental strand, 41037785 - 41037527
Alignment:
Q  2 atttatagaggtggagggctgcagagccgttgcggtggcacacctgactctggcggttacgaaatcatgggaagtgtaaccgccagagagtttattgtgg 101  Q
    |||||||||||||||||||||| |||||||||   ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| |     
T  41037785 atttatagaggtggagggctgcggagccgttgtaatggcacacctggctctggcggttacgaaatcgtgggaagtgtaaccgccagagagtttattgcgt 41037686  T
Q  102 gaacgtgcaaagagacgttatggttcgtttgaaccagtctctttcgctctgtgcacccccttgtgtggaaaggagtgtgtcgcaagtaactttgccaaac 201  Q
    ||||||||| | ||| ||||| |||| ||||||||||||||  | |||  |||||||||| |    ||||||  |||||| |||||||| |||||||| |    
T  41037685 gaacgtgcagacagatgttatcgttcatttgaaccagtctcgcttgcttcgtgcaccccccttgccggaaagtggtgtgttgcaagtaagtttgccaacc 41037586  T
Q  202 gtggtgtttgagctttggattgtattgaacctaagtaaatgggccaaagatccttttgg 260  Q
    || ||||||| |||||||||||||||||  ||||||||||||| || || |||||||||    
T  41037585 gtagtgtttgggctttggattgtattgagtctaagtaaatgggtcataggtccttttgg 41037527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 5590838 - 5590612
Alignment:
Q  1 tatttatagaggtggagggctgcagagccgttgcggtggcacacctgactctggcggttacgaaatcatgggaagtgtaaccgccagagagtttattgtg 100  Q
    |||||||||||||||||||| ||||||||||||   |||||||||| |||||| ||||||||||||  ||||||||||||||||| | |||||||||| |    
T  5590838 tatttatagaggtggagggcagcagagccgttgtaatggcacaccttactctgacggttacgaaattgtgggaagtgtaaccgcctgcgagtttattgcg 5590739  T
Q  101 ggaacgtgcaaagagacgttatggttcgtttgaaccagtctctttcgctctgtgcaccc-ccttgtgtggaaaggagtgtgtcgcaagtaactttgccaa 199  Q
    |||| ||| |||||||||||  ||||||||||||||||||||||||| ||||||||||| ||| | || |||||| || |||||| ||||| ||||||||    
T  5590738 ggaatgtggaaagagacgttggggttcgtttgaaccagtctctttcgttctgtgcaccctcctcgcgt-gaaaggggtctgtcgcgagtaattttgccaa 5590640  T
Q  200 acgtggtgtttgagctttggattgtatt 227  Q
    |||||||||||| |||||||| ||||||    
T  5590639 acgtggtgtttgggctttggagtgtatt 5590612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 1 - 259
Target Start/End: Complemental strand, 15620332 - 15620075
Alignment:
Q  1 tatttatagaggtggagggctgcagagccgttgcggtggcacacctgactctggcggttacgaaatcatgggaagtgtaaccgccagagagtttattgtg 100  Q
    |||||||||||||| ||||||| ||||| ||||   |||||||| || ||||| ||||||||||||  ||||||||||||||||||||||||||||||||    
T  15620332 tatttatagaggtgaagggctgtagagctgttgtaatggcacacttggctctgacggttacgaaattgtgggaagtgtaaccgccagagagtttattgtg 15620233  T
Q  101 ggaacgtgcaaagagacgttatggttcgtttgaaccagtctctttcgctctgtgcacccccttgtgtggaaaggagtgtgtcgcaagtaactttgccaaa 200  Q
    |||||||||| ||||||||| ||| ||||||||||| |||||  |||||| || ||||||||||   || |||| ||| || |||||||| |||| ||||    
T  15620232 ggaacgtgcagagagacgttgtggctcgtttgaacccgtctcgctcgctccgtacacccccttgcaagg-aaggggtgcgttgcaagtaagtttgtcaaa 15620134  T
Q  201 cgtggtgtttgagctttggattgtattgaacctaagtaaatgggccaaagatccttttg 259  Q
    ||||| |||||  ||||||||||||||   ||| | ||||| ||||||| |||||||||    
T  15620133 cgtggcgtttggactttggattgtattaggcctgaataaataggccaaatatccttttg 15620075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 4 - 161
Target Start/End: Original strand, 42792543 - 42792700
Alignment:
Q  4 ttatagaggtggagggctgcagagccgttgcggtggcacacctgactctggcggttacgaaatcatgggaagtgtaaccgccagagagtttattgtggga 103  Q
    ||||||||||||||||||||||||| ||||  |||||||||||| ||||||||||||||||||| |||||||||||||||| ||||||||||||| ||||    
T  42792543 ttatagaggtggagggctgcagagcagttgtagtggcacacctggctctggcggttacgaaatcgtgggaagtgtaaccgctagagagtttattgcggga 42792642  T
Q  104 acgtgcaaagagacgttatggttcgtttgaaccagtctctttcgctctgtgcaccccc 161  Q
    ||||||| ||| ||||| ||  ||||||||||| |||||  | |||||||||||||||    
T  42792643 acgtgcagagatacgttgtgactcgtttgaaccggtctcgcttgctctgtgcaccccc 42792700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 58 - 273
Target Start/End: Original strand, 22510097 - 22510312
Alignment:
Q  58 ttacgaaatcatgggaagtgtaaccgccagagagtttattgtgggaacgtgcaaagagacgttatggttcgtttgaaccagtctctttcgctctgtgcac 157  Q
    |||||||||| ||||||||||||||||| | |||||||||| |||||| || |||||||||||   |||||||| ||||||||||||||| || ||||||    
T  22510097 ttacgaaatcgtgggaagtgtaaccgcctgtgagtttattgcgggaacatggaaagagacgttggagttcgttttaaccagtctctttcgttccgtgcac 22510196  T
Q  158 cc-ccttgtgtggaaaggagtgtgtcgcaagtaactttgccaaacgtggtgtttgagctttggattgtattgaacctaagtaaatgggccaaagatcctt 256  Q
    || ||| | |||| |||| |||||||||  |||| |||  |||||||||||||||| ||||  | |||||||  ||||||||||||||||||||||||||    
T  22510197 ccacctcgcgtgg-aaggggtgtgtcgcgggtaattttatcaaacgtggtgtttgaactttatagtgtattgggcctaagtaaatgggccaaagatcctt 22510295  T
Q  257 ttggtcggtcgagaaca 273  Q
    |||| ||||| ||||||    
T  22510296 ttggccggtccagaaca 22510312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 1 - 273
Target Start/End: Original strand, 38608326 - 38608608
Alignment:
Q  1 tatttatagaggtggagggctgcagagccgttgcggtggcacacctgactctggcggttacgaaatcatgggaagtgtaaccgccagagagtttattgtg 100  Q
    |||||||||||||||||| || ||||||||||| || |||||||||| ||||||||||||||||||| |||||||||||||||||| ||||||||||| |    
T  38608326 tatttatagaggtggaggtctacagagccgttgtggaggcacacctggctctggcggttacgaaatcgtgggaagtgtaaccgccaaagagtttattgcg 38608425  T
Q  101 ggaacg---------tgcaaagagacgttatggttcgtttgaaccagtctctttcgctctgtgcacccccttgtgtggaaaggagtgtgtcgcaagtaa- 190  Q
    ||||||         |||||||||||||  | ||||||||||||| ||||  || | |  ||||||||||| | || | | || ||||  ||| |||||     
T  38608426 ggaacgtgcagaatatgcaaagagacgtcgtagttcgtttgaaccggtcttatttgattcgtgcaccccctcgcgtag-agggggtgtaccgcgagtaaa 38608524  T
Q  191 -ctttgccaaacgtggtgtttgagctttggattgtattgaacctaagtaaatgggccaaagatccttttggtcggtcgagaaca 273  Q
      || ||||||| ||| |||||| ||||| ||||||||||||||||||||||| | ||||| ||||||||| ||||| ||||||    
T  38608525 gtttagccaaacatggagtttgaactttgaattgtattgaacctaagtaaatgagtcaaaggtccttttggccggtccagaaca 38608608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 73 - 273
Target Start/End: Original strand, 13537860 - 13538060
Alignment:
Q  73 aagtgtaaccgccagagagtttattgtgggaacgtgcaaagagacgttatggttcgtttgaaccagtctctttcgctctgtgcaccccctt-gtgtggaa 171  Q
    ||||||||||| | | |||||||||| ||||||||| |||||||||||  ||||| ||||||||||||||||||| || || ||||||| | | ||||||    
T  13537860 aagtgtaaccggctgtgagtttattgcgggaacgtggaaagagacgttggggttcatttgaaccagtctctttcgttccgtacacccccctcgcgtggaa 13537959  T
Q  172 aggagtgtgtcgcaagtaactttgccaaacgtggtgtttgagctttggattgtattgaacctaagtaaatgggccaaagatccttttggtcggtcgagaa 271  Q
     || ||||||||| ||||| ||||||||||||| |||||| ||||||||| ||||||  ||||||||||||| ||||| || |||||| |||||| ||||    
T  13537960 ggg-gtgtgtcgcgagtaattttgccaaacgtgatgtttgggctttggatggtattgggcctaagtaaatggaccaaatattcttttgatcggtccagaa 13538058  T
Q  272 ca 273  Q
    ||    
T  13538059 ca 13538060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 14 - 250
Target Start/End: Complemental strand, 19330052 - 19329816
Alignment:
Q  14 ggagggctgcagagccgttgcggtggcacacctgactctggcggttacgaaatcatgggaagtgtaaccgccagagagtttattgtgggaacgtgcaaag 113  Q
    |||||||| ||||||| |||   |||||||||   ||||||||||||||||||| ||||||||||||||||||||||| |||||| |||||| |||| ||    
T  19330052 ggagggctacagagccattgtaatggcacaccaagctctggcggttacgaaatcgtgggaagtgtaaccgccagagagattattgcgggaacatgcagag 19329953  T
Q  114 agacgttatggttcgtttgaaccagtctctttcgctctgtgcacccccttgtgtggaaaggagtgtgtcgcaagtaactttgccaaacgtggtgtttgag 213  Q
      ||||| ||| ||||||||||| ||||   |  ||| |||||||||| |    || ||||  ||| ||||||||||  |||||||||||||| |||| |    
T  19329952 taacgttgtggctcgtttgaaccggtcttgctttctccgtgcacccccctcgcagggaagggatgtctcgcaagtaatgttgccaaacgtggtatttggg 19329853  T
Q  214 ctttggattgtattgaacctaagtaaatgggccaaag 250  Q
    ||||| |||||||||  ||||||||||||||||||||    
T  19329852 ctttgaattgtattgggcctaagtaaatgggccaaag 19329816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 22922779 - 22922645
Alignment:
Q  1 tatttatagaggtggagggctgcagagccgttgcggtggcacacctgactctggcggttacgaaatcatgggaagtgtaaccgccagagagtttattgtg 100  Q
    ||||||||||||||||||||| |||||||||||  ||| |||||||| |||| |||||||||||||| ||||||||||||||||||||||||||||||      
T  22922779 tatttatagaggtggagggctacagagccgttgtagtgacacacctggctctagcggttacgaaatcgtgggaagtgtaaccgccagagagtttattgct 22922680  T
Q  101 ggaacgtgcaaagagacgttatggttcgtttgaac 135  Q
    | ||| | || ||||| ||| ||||||||||||||    
T  22922679 gaaacatacagagagaggttgtggttcgtttgaac 22922645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 22922182 - 22922050
Alignment:
Q  1 tatttatagaggtggagggctgcagagccgttgcggtggcacacctgactctggcggttacgaaatcatgggaagtgtaaccgccagagagtttattgtg 100  Q
    ||||||||||||||||||||| |||||||||||  ||| |||||||| |||||| |||||| ||||| |||||||||||||||||||| ||||||||       
T  22922182 tatttatagaggtggagggctacagagccgttgtagtgacacacctggctctggtggttacaaaatcgtgggaagtgtaaccgccagaaagtttattcct 22922083  T
Q  101 ggaacgtgcaaagagacgttatggttcgtttga 133  Q
    | ||||| || ||||||||| ||||||||||||    
T  22922082 gaaacgtacagagagacgttgtggttcgtttga 22922050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 93 - 276
Target Start/End: Original strand, 24095343 - 24095526
Alignment:
Q  93 ttattgtgggaacgtgcaaagagacgttatggttcgtttgaaccagtctctttcgctctgtgca-cccccttgtgtggaaaggagtgtgtcgcaagtaac 191  Q
    |||||| |||||||||||||||||||||  |||| ||||||||| |||||  | |||| ||||| |||||| | | |||  || ||||| ||||||||||    
T  24095343 ttattgcgggaacgtgcaaagagacgttggggtttgtttgaaccggtctcgcttgctccgtgcatccccctcgcgcggacggg-gtgtgccgcaagtaac 24095441  T
Q  192 tttgccaaacgtggtgtttgagctttggattgtattgaacctaagtaaatgggccaaagatccttttggtcggtcgagaacagta 276  Q
     |||||||||||||| |||| ||||||||||||||||  |||||||| ||||||||||  ||||||||| ||||| |||||||||    
T  24095442 gttgccaaacgtggtatttgggctttggattgtattgggcctaagtagatgggccaaaactccttttggccggtccagaacagta 24095526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 54 - 83
Target Start/End: Original strand, 31393167 - 31393196
Alignment:
Q  54 gcggttacgaaatcatgggaagtgtaaccg 83  Q
    ||||||||||||||||||||||||||||||    
T  31393167 gcggttacgaaatcatgggaagtgtaaccg 31393196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 231 - 259
Target Start/End: Complemental strand, 5589352 - 5589324
Alignment:
Q  231 cctaagtaaatgggccaaagatccttttg 259  Q
    |||||||||||||||||||||||||||||    
T  5589352 cctaagtaaatgggccaaagatccttttg 5589324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 137; Significance: 3e-71; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 1 - 276
Target Start/End: Complemental strand, 30198 - 29923
Alignment:
Q  1 tatttatagaggtggagggctgcagagccgttgcggtggcacacctgactctggcggttacgaaatcatgggaagtgtaaccgccagagagtttattgtg 100  Q
    ||||||||||||||||||||||||||||| |||    || ||||||| |||||| |||||||||||  |||||||||||||| ||||||| ||||||| |    
T  30198 tatttatagaggtggagggctgcagagccattgtaacggaacacctggctctggtggttacgaaattgtgggaagtgtaacctccagagattttattgcg 30099  T
Q  101 ggaacgtgcaaagagacgttatggttcgtttgaaccagtctctttcgctctgtgcacc-cccttgtgtggaaaggagtgtgtcgcaagtaactttgccaa 199  Q
    |||||||| | ||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||  ||| |||| |||||| ||| |||||||||||||    
T  30098 ggaacgtgtagagagacgttgtggttcgtttgaaccagtctctttcgctccgtgcacctcccttgcatgg-aaggggtgtgttgcatgtaactttgccaa 30000  T
Q  200 acgtggtgtttgagctttggattgtattgaacctaagtaaatgggccaaagatccttttggtcggtcgagaacagta 276  Q
    ||||| |||||| |||||||||||| |||  ||||| |||||||||||||| ||||||||| ||||| |||||||||    
T  29999 acgtgctgtttgggctttggattgtgttgggcctaattaaatgggccaaaggtccttttggccggtccagaacagta 29923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0280 (Bit Score: 127; Significance: 2e-65; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 1 - 274
Target Start/End: Complemental strand, 1181 - 908
Alignment:
Q  1 tatttatagaggtggagggctgcagagccgttgcggtggcacacctgactctggcggttacgaaatcatgggaagtgtaaccgccagagagtttattgtg 100  Q
    ||||||||||||||||||||| || ||||||||   ||| ||||||| |||| ||| |||||||||| |||||||||||||||||| |||||||||||      
T  1181 tatttatagaggtggagggctacatagccgttgtaatggaacacctggctctagcgattacgaaatcgtgggaagtgtaaccgccatagagtttattgca 1082  T
Q  101 ggaacgtgcaaagagacgttatggttcgtttgaaccagtctctttcgctctgtgcacccccttgtgtgga-aaggagtgtgtcgcaagtaactttgccaa 199  Q
    ||||| |||| ||| ||||| |||||||||||||||||||||  |||||| ||||||||||||  ||||| |||| || ||  |||||||| ||||| ||    
T  1081 ggaacatgcagagaaacgttgtggttcgtttgaaccagtctcgctcgctccgtgcaccccctt-cgtggagaaggggtatgctgcaagtaagtttgctaa 983  T
Q  200 acgtggtgtttgagctttggattgtattgaacctaagtaaatgggccaaagatccttttggtcggtcgagaacag 274  Q
    |||||||||||| |||||||||||||||| ||||||||||||||||||||| ||||||||  ||||| |||||||    
T  982 acgtggtgtttgggctttggattgtattggacctaagtaaatgggccaaaggtccttttgaccggtccagaacag 908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 126; Significance: 1e-64; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 1 - 273
Target Start/End: Complemental strand, 4337 - 4065
Alignment:
Q  1 tatttatagaggtggagggctgcagagccgttgcggtggcacacctgactctggcggttacgaaatcatgggaagtgtaaccgccagagagtttattgtg 100  Q
    |||||||||||||||||||||||||||||||||  |||||||||||| |||||| |||||||||||| ||||| ||||||| || ||||||||||||| |    
T  4337 tatttatagaggtggagggctgcagagccgttgtagtggcacacctggctctggtggttacgaaatcgtgggatgtgtaactgcgagagagtttattgcg 4238  T
Q  101 ggaacgtgcaaagagacgttatggttcgtttgaaccagtctctttcgctctgtgcacccccttgtgtgga-aaggagtgtgtcgcaagtaactttgccaa 199  Q
     ||||||||| | ||||||| ||||||||||||||| ||| |  |||||| ||| ||||||||  ||||| |||| || ||  |||||||| ||||||||    
T  4237 agaacgtgcagatagacgttgtggttcgtttgaaccggtcccgctcgctccgtgaaccccctt-cgtggagaaggggtatgctgcaagtaagtttgccaa 4139  T
Q  200 acgtggtgtttgagctttggattgtattgaacctaagtaaatgggccaaagatccttttggtcggtcgagaaca 273  Q
    ||||||||||||  ||||||||||||||  ||||||||||||| |||||| |||||||||| ||||| ||||||    
T  4138 acgtggtgtttggactttggattgtatttgacctaagtaaatgagccaaatatccttttggccggtccagaaca 4065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 125; Significance: 4e-64; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 1 - 276
Target Start/End: Complemental strand, 151431 - 151157
Alignment:
Q  1 tatttatagaggtggagggctgcagagccgttgcggtggcacacctgactctggcggttacgaaatcatgggaagtgtaaccgccagagagtttattgtg 100  Q
    |||||||||||||||||||||||||||||||||  |||| | ||||| |||| |||||||||||||| ||||||||| ||| ||||||||||||||||      
T  151431 tatttatagaggtggagggctgcagagccgttgtagtggaagacctggctctagcggttacgaaatcgtgggaagtgaaac-gccagagagtttattgca 151333  T
Q  101 ggaacgtgcaaagagacgttatggttcgtttgaaccagtctctttcgctctgtgcacccccttgtgtgga-aaggagtgtgtcgcaagtaactttgccaa 199  Q
    ||||||| || ||||||||| ||||||||||||| | |||||  |||||| |||||||||||| |||||  |||| || ||  |||||||| ||||||||    
T  151332 ggaacgtacagagagacgttgtggttcgtttgaatcggtctcgctcgctccgtgcaccccctt-tgtggggaaggggtatgctgcaagtaagtttgccaa 151234  T
Q  200 acgtggtgtttgagctttggattgtattgaacctaagtaaatgggccaaagatccttttggtcggtcgagaacagta 276  Q
    |||| ||||||| |||||||||||||||   |||||||||||||||||||||||||||||| ||||| || ||||||    
T  151233 acgtagtgtttgggctttggattgtattaggcctaagtaaatgggccaaagatccttttggccggtccagtacagta 151157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 125; Significance: 4e-64; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 5 - 265
Target Start/End: Original strand, 242736 - 242996
Alignment:
Q  5 tatagaggtggagggctgcagagccgttgcggtggcacacctgactctggcggttacgaaatcatgggaagtgtaaccgccagagagtttattgtgggaa 104  Q
    |||||||||||||||| ||||||||||||   ||||||||||| |||| ||||||||| |||| ||||||||||||| |||| ||||||||||| |||||    
T  242736 tatagaggtggagggcggcagagccgttgtaatggcacacctggctcttgcggttacgtaatcgtgggaagtgtaactgccaaagagtttattgcgggaa 242835  T
Q  105 cgtgcaaagagacgttatggttcgtttgaaccagtctctttcgctctgtgcacccccttgtgtggaaaggagtgtgtcgcaagtaactttgccaaacgtg 204  Q
    |||||||||||||||| ||||||||||||||| ||||   |||||| |||||||| | | |  || |||| |||||||||||||||  ||||||||| ||    
T  242836 cgtgcaaagagacgttgtggttcgtttgaaccggtcttgctcgctccgtgcacccgcctatcggggaaggggtgtgtcgcaagtaatgttgccaaacttg 242935  T
Q  205 gtgtttgagctttggattgtattgaacctaagtaaatgggccaaagatccttttggtcggt 265  Q
    ||||||| ||||| ||||||||||  |||||||||||||| ||||| ||||||||| ||||    
T  242936 gtgtttgggctttagattgtattgggcctaagtaaatgggacaaaggtccttttggccggt 242996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 5 - 260
Target Start/End: Original strand, 253376 - 253631
Alignment:
Q  5 tatagaggtggagggctgcagagccgttgcggtggcacacctgactctggcggttacgaaatcatgggaagtgtaaccgccagagagtttattgtgggaa 104  Q
    |||| ||||||| ||||||| || |||||   ||||||||||| ||||||||||||||||||| ||||||||||||| |||||||||||||||| |||||    
T  253376 tataaaggtggacggctgcaaagtcgttgtaatggcacacctggctctggcggttacgaaatcgtgggaagtgtaactgccagagagtttattgcgggaa 253475  T
Q  105 cgtgcaaagagacgttatggttcgtttgaaccagtctctttcgctctgtgcacccccttgtgtggaaaggagtgtgtcgcaagtaactttgccaaacgtg 204  Q
    |||||| ||||| ||| |||||| |||||||| ||||    | ||| |||||| ||| | |  || |||| |||||||||| ||||  ||||||||||||    
T  253476 cgtgcagagagatgttgtggttcatttgaaccggtcttgcactctccgtgcactcccctctcggggaaggggtgtgtcgcacgtaatgttgccaaacgtg 253575  T
Q  205 gtgtttgagctttggattgtattgaacctaagtaaatgggccaaagatccttttgg 260  Q
    ||||||| | ||||||||||||||  |||||| ||||||||||||| | |||||||    
T  253576 gtgtttgggatttggattgtattgggcctaagaaaatgggccaaaggttcttttgg 253631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 122; Significance: 2e-62; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 1 - 273
Target Start/End: Complemental strand, 11013 - 10741
Alignment:
Q  1 tatttatagaggtggagggctgcagagccgttgcggtggcacacctgactctggcggttacgaaatcatgggaagtgtaaccgccagagagtttattgtg 100  Q
    |||||||| ||||||||||||| ||||||||||   |||||||||| |||||| ||||||||||||||||||||||||||||||| | |||||||||| |    
T  11013 tatttataaaggtggagggctgtagagccgttgtaatggcacacctaactctgacggttacgaaatcatgggaagtgtaaccgcctgtgagtttattgcg 10914  T
Q  101 ggaacgtgcaaagagacgttatggttcgtttgaaccagtctctttcgctctgtgcac-ccccttgtgtggaaaggagtgtgtcgcaagtaactttgccaa 199  Q
    ||||| || |||||||||||  | ||| |||||||| |||||||||| ||  ||||| ||||| |  ||| |||| ||||||||| ||||| ||||||||    
T  10913 ggaacatggaaagagacgttgggtttcttttgaaccggtctctttcgttccttgcactcccctcgcatgg-aaggggtgtgtcgcgagtaattttgccaa 10815  T
Q  200 acgtggtgtttgagctttggattgtattgaacctaagtaaatgggccaaagatccttttggtcggtcgagaaca 273  Q
    |||||||||||| ||||||||| ||||||  ||||||| |||||||||||||||||||||| || || ||||||    
T  10814 acgtggtgtttgggctttggatggtattgggcctaagtgaatgggccaaagatccttttggccgatccagaaca 10741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0362 (Bit Score: 117; Significance: 2e-59; HSPs: 1)
Name: scaffold0362
Description:

Target: scaffold0362; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 1 - 258
Target Start/End: Complemental strand, 7490 - 7233
Alignment:
Q  1 tatttatagaggtggagggctgcagagccgttgcggtggcacacctgactctggcggttacgaaatcatgggaagtgtaaccgccagagagtttattgtg 100  Q
    |||||||||||||||||||||||| ||||||||   |||||||||| |||||| || |||||||||| | ||||||||||| ||| | |||||||||| |    
T  7490 tatttatagaggtggagggctgcaaagccgttgtaatggcacaccttactctgacg-ttacgaaatcgttggaagtgtaactgcctgtgagtttattgcg 7392  T
Q  101 ggaacgtgcaaagagacgttatggttcgtttgaaccagtctctttcgctctgtgca--cccccttgtgtggaaaggagtgtgtcgcaagtaactttgcca 198  Q
    |||||||| |||||||||||  ||||||||||||||||||||||||| || |||||  |||||| |||||| | || ||||||||| ||||| |||||||    
T  7391 ggaacgtggaaagagacgttggggttcgtttgaaccagtctctttcgttccgtgcaccccccctcgtgtgg-agggggtgtgtcgcgagtaattttgcca 7293  T
Q  199 aacgtggtgtttgagctttggattgtattgaacctaagtaaatgggccaaagatcctttt 258  Q
    ||| ||||||||| |||||||||  ||||| || ||| ||||||||||||||||||||||    
T  7292 aacttggtgtttgggctttggatgatattggacataaataaatgggccaaagatcctttt 7233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 116; Significance: 9e-59; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 1 - 276
Target Start/End: Original strand, 68732 - 69007
Alignment:
Q  1 tatttatagaggtggagggctgcagagccgttgcggtggcacacctgactctggcggttacgaaatcatgggaagtgtaaccgccagagagtttattgtg 100  Q
    |||||||||||||||||||||||| ||||||||   || |||||||  || |||||||||||||||| |||||||||||||||| ||||||||||||| |    
T  68732 tatttatagaggtggagggctgcaaagccgttgtaatgacacaccttgctttggcggttacgaaatcgtgggaagtgtaaccgctagagagtttattgcg 68831  T
Q  101 ggaacgtgcaaagagacgttatggttcgtttgaaccagtctctttcgctctgtgcacccccttgtgtggaaaggagtgtgtcgcaagtaactttgccaaa 200  Q
    ||||||||  |||||||||| ||| |||||||||| ||||||  | |||| |||||||||| |    |  |||| |||||||||||||||  |||| |||    
T  68832 ggaacgtgggaagagacgttgtggctcgtttgaactagtctcggttgctccgtgcacccccctcgcagagaaggggtgtgtcgcaagtaatgttgcaaaa 68931  T
Q  201 cgtggtgtttgagctttggattgtattgaacctaagtaaatgggccaaagatccttttggtcggtcgagaacagta 276  Q
    ||||| || || |||||| |||||||||  |||||||||||||||||||||||||||||| ||||  |||||||||    
T  68932 cgtggagtctgggctttgaattgtattgggcctaagtaaatgggccaaagatccttttggccggttcagaacagta 69007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 74904 - 75045
Alignment:
Q  1 tatttatagaggtggagggctgcagagccgttgcggtggcacacctgactctggcggttacgaaatcatgggaagtgtaaccgccagagagtttattgtg 100  Q
    |||||||||||||||||||||| ||||||||||   ||||||||||| ||||||| |||| |||||| | |||||||||||||||||||||||||||| |    
T  74904 tatttatagaggtggagggctgtagagccgttgtaatggcacacctggctctggcagttatgaaatcgtcggaagtgtaaccgccagagagtttattgcg 75003  T
Q  101 ggaacgtgcaaagagacgttatggttcgtttgaaccagtctc 142  Q
    |||||||||  ||| ||||| ||| |||||||||||||||||    
T  75004 ggaacgtgcggagacacgttgtggctcgtttgaaccagtctc 75045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0989 (Bit Score: 113; Significance: 6e-57; HSPs: 1)
Name: scaffold0989
Description:

Target: scaffold0989; HSP #1
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 1662 - 1444
Alignment:
Q  1 tatttatagaggtggagggctgcagagccgttgcggtggcacacctgactctggcggttacgaaatcatgggaagtgtaaccgccagagagtttattgtg 100  Q
    |||||||||||||||| ||||| ||||| ||||   ||||||||||| |||| || ||||  ||||| || ||||||||||||||||||||||||||| |    
T  1662 tatttatagaggtggacggctgtagagctgttgtaatggcacacctggctctagcagttataaaatcgtgagaagtgtaaccgccagagagtttattgcg 1563  T
Q  101 ggaacgtgcaaagagacgttatggttcgtttgaaccagtctctttcgctctgtgcacccccttgtgtggaaaggagtgtgtcgcaagtaactttgccaaa 200  Q
    |||||||| | ||||| ||| ||||||||||||||||||||||||||||| ||||| ||||||||| |||| ||| ||||||||||||||||| ||||||    
T  1562 ggaacgtgtagagagatgttgtggttcgtttgaaccagtctctttcgctccgtgca-ccccttgtggggaaggga-tgtgtcgcaagtaacttcgccaaa 1465  T
Q  201 cgtggtgtttgagctttggat 221  Q
    ||||||||||| |||||||||    
T  1464 cgtggtgtttgggctttggat 1444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 113; Significance: 6e-57; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 1 - 275
Target Start/End: Complemental strand, 54744 - 54471
Alignment:
Q  1 tatttatagaggtggagggctgcagagccgttgcggtggcacacctgactctggcggttacgaaatcatgggaagtgtaaccgccagagagtttattgtg 100  Q
    |||||||||||||||||||||||| ||||||||   ||| |||||| |||||| |||||||||||||||||||||||||||| || | |||||||||| |    
T  54744 tatttatagaggtggagggctgcatagccgttgtaatggtacaccttactctgacggttacgaaatcatgggaagtgtaaccacctgtgagtttattgcg 54645  T
Q  101 ggaacgtgcaaagagacgttatggttcgtttgaaccagtctctttcgctctgtgcaccccctt-gtgtggaaaggagtgtgtcgcaagtaactttgccaa 199  Q
    |||||||| | |||||||||  | |||||||||||||||||| |||| || |||| ||||| | | |||||  || ||||||| | ||||| ||||||||    
T  54644 ggaacgtggagagagacgttgggtttcgtttgaaccagtctccttcgttccgtgcgcccccctcgcgtgga--ggggtgtgtctcgagtaattttgccaa 54547  T
Q  200 acgtggtgtttgagctttggattgtattgaacctaagtaaatgggccaaagatccttttggtcggtcgagaacagt 275  Q
    ||||||  |||| |||||| | |||||||   ||||||||||||||||||||||||||||| ||||| ||||||||    
T  54546 acgtggattttgggctttgtagtgtattgggtctaagtaaatgggccaaagatccttttggccggtccagaacagt 54471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 113; Significance: 6e-57; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 47556 - 47396
Alignment:
Q  1 tatttatagaggtggagggctgcagagccgttgcggtggcacacctgactctggcggttacgaaatcatgggaagtgtaaccgccagagagtttattgtg 100  Q
    |||||||||||||||||||||||||||||||||   |||||||| || ||||||||||||| ||||  |||||||||||||||||||||||||||||| |    
T  47556 tatttatagaggtggagggctgcagagccgttgtaatggcacacttggctctggcggttacaaaattgtgggaagtgtaaccgccagagagtttattgcg 47457  T
Q  101 ggaacgtgcaaagagacgttatggttcgtttgaaccagtctctttcgctctgtgcaccccc 161  Q
    |||||||||| ||||||||| ||||||||||||||||||||||||||||| ||||||||||    
T  47456 ggaacgtgcagagagacgttgtggttcgtttgaaccagtctctttcgctccgtgcaccccc 47396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 171 - 276
Target Start/End: Complemental strand, 56329 - 56224
Alignment:
Q  171 aaggagtgtgtcgcaagtaactttgccaaacgtggtgtttgagctttggattgtattgaacctaagtaaatgggccaaagatccttttggtcggtcgaga 270  Q
    |||| |||||||||||||||||| ||||||||||||||||| ||||||||||||||||  |||||||||||||||||||| ||||||| ||| ||| |||    
T  56329 aaggggtgtgtcgcaagtaacttcgccaaacgtggtgtttgggctttggattgtattgggcctaagtaaatgggccaaaggtcctttttgtcagtccaga 56230  T
Q  271 acagta 276  Q
    | ||||    
T  56229 atagta 56224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 112; Significance: 2e-56; HSPs: 4)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 1 - 195
Target Start/End: Original strand, 1667 - 1861
Alignment:
Q  1 tatttatagaggtggagggctgcagagccgttgcggtggcacacctgactctggcggttacgaaatcatgggaagtgtaaccgccagagag-tttattgt 99  Q
    |||||||||||||||| ||||||||||||||||   ||||| || || ||||||||||||||||||| ||||||||||||||||||||||| |||||||     
T  1667 tatttatagaggtggatggctgcagagccgttgtaatggcatacttggctctggcggttacgaaatcgtgggaagtgtaaccgccagagagttttattgc 1766  T
Q  100 gggaacgtgcaaagagacgttatggttcgtttgaaccagtctctttcgctctgtgcacccccttgtgtggaaaggagtgtgtcgcaagtaactttg 195  Q
    ||||||||||| ||||||||| |||||||||||||||| |||||||||||| | |||||||||||||||| |||| || ||| |||||||||||||    
T  1767 gggaacgtgcagagagacgttgtggttcgtttgaaccaatctctttcgctccgggcacccccttgtgtgg-aaggggtatgttgcaagtaactttg 1861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 15424 - 15517
Alignment:
Q  1 tatttatagaggtggagggctgcagagccgttgcggtggcacacctgactctggcggttacgaaatcatgggaagtgtaaccgccagagagttt 94  Q
    ||||||||||||||||||||||||||||||||||  |||||  |||||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  15424 tatttatagaggtggagggctgcagagccgttgcaatggcatgcctgactctggcggttactaaatcgtgggaagtgtaaccgccagagagttt 15517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 162 - 246
Target Start/End: Original strand, 15520 - 15603
Alignment:
Q  162 ttgtgtggaaaggagtgtgtcgcaagtaactttgccaaacgtggtgtttgagctttggattgtattgaacctaagtaaatgggcc 246  Q
    |||||||||| || || ||| |||||||||||||||||||| | ||||||||||| | |||||||||  | ||||||||||||||    
T  15520 ttgtgtggaaggg-gtatgttgcaagtaactttgccaaacgcgttgtttgagcttggtattgtattgggcataagtaaatgggcc 15603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 266
Target Start/End: Original strand, 15692 - 15741
Alignment:
Q  217 tggattgtattgaacctaagtaaatgggccaaagatccttttggtcggtc 266  Q
    ||||||||||||  ||||| ||||| |||||||||||||| |||||||||    
T  15692 tggattgtattgggcctaaataaataggccaaagatccttctggtcggtc 15741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 110; Significance: 3e-55; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 5 - 273
Target Start/End: Original strand, 12386 - 12651
Alignment:
Q  5 tatagaggtggagggctgcagagccgttgcggtggcacacctgactctggcggttacgaaatcatgggaagtgtaaccgccagagagtttattgtgggaa 104  Q
    |||||||||| ||||||||||||||||||   ||||||||| | ||||||||||||| |||||||||||||||||||||| |||||| |||||| |||||    
T  12386 tatagaggtgaagggctgcagagccgttgtaatggcacaccaggctctggcggttacaaaatcatgggaagtgtaaccgctagagagattattgcgggaa 12485  T
Q  105 cgtgcaaagagacgttatggttcgtttgaaccagtctctttcgctctgtgcacccccttgtgtggaaaggagtgtgtcgcaagtaactttgccaaacgtg 204  Q
    |||||  | ||||||| ||| || ||| |||| ||||  ||||||||||||| ||||| | |  ||| || |||||||||||||||  |||| |||||||    
T  12486 cgtgc--acagacgttgtggctcatttaaaccggtcttgttcgctctgtgcatcccctcgcggagaatgg-gtgtgtcgcaagtaatgttgcaaaacgtg 12582  T
Q  205 gtgtttgagctttggattgtattgaacctaagtaaatgggccaaagatccttttggtcggtcgagaaca 273  Q
    ||||||| |||||| ||||||||   |||||||||||||||||||| ||||||||| ||||| ||||||    
T  12583 gtgtttgggctttgaattgtattaggcctaagtaaatgggccaaagctccttttggccggtccagaaca 12651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0265 (Bit Score: 105; Significance: 3e-52; HSPs: 3)
Name: scaffold0265
Description:

Target: scaffold0265; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 1 - 276
Target Start/End: Original strand, 14930 - 15211
Alignment:
Q  1 tatttatagaggtggagggctgcagagccgttgcggtggcacacctgactctggcggttacgaaatcatgggaagtgtaaccgccagagagtttattgtg 100  Q
    |||||||| ||||||| ||| ||||||||||||   |||||||||| |||||| ||||||||||||| ||||||||||||| ||| | |||||||||| |    
T  14930 tatttataaaggtggatggccgcagagccgttgtaatggcacacctaactctgacggttacgaaatcgtgggaagtgtaacagcctgtgagtttattgcg 15029  T
Q  101 ggaacgtgcaaagagacgttatggttcgtttgaaccagtctctttcgctctgtgca-------cccccttgtgtggaaaggagtgtgtcgcaagtaactt 193  Q
    |||||||| ||||||||| |  ||||||||||||||  ||||||||| || |||||       ||||||   |||| |||| ||||||||| ||||| ||    
T  15030 ggaacgtggaaagagacgctggggttcgtttgaaccgatctctttcgttccgtgcacccccccccccctcacgtgg-aaggggtgtgtcgcgagtaattt 15128  T
Q  194 tgccaaacgtggtgtttgagctttggattgtattgaacctaagtaaatgggccaaagatccttttggtcggtcgagaacagta 276  Q
    |||||||||||||||||| ||||||||| ||| ||  ||||||| |||||||||||||||||||||| ||||| || ||||||    
T  15129 tgccaaacgtggtgtttgggctttggatagtactgggcctaagtgaatgggccaaagatccttttggccggtccaggacagta 15211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0265; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 89 - 275
Target Start/End: Original strand, 17200 - 17386
Alignment:
Q  89 gagtttattgtgggaacgtgcaaagagacgttatggttcgtttgaaccagtctctttcgctctgtgca-cccccttgtgtggaaaggagtgtgtcgcaag 187  Q
    |||||||||| ||||||||| |||||||||||  ||||||||||||||||||||||||| || ||||| |||||| | |||| |||| ||||||| | ||    
T  17200 gagtttattgcgggaacgtggaaagagacgttggggttcgtttgaaccagtctctttcgttccgtgcacccccctcgcgtgg-aaggggtgtgtcacgag 17298  T
Q  188 taactttgccaaacgtggtgtttgagctttggattgtattgaacctaagtaaatgggccaaagatccttttggtcggtcgagaacagt 275  Q
    ||| |||||||||||||||||||| | ||||||| ||| ||  ||||||| |||||||||||||| ||||||| ||||| ||||||||    
T  17299 taattttgccaaacgtggtgtttgggatttggatggtactgggcctaagtgaatgggccaaagattcttttggccggtccagaacagt 17386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0265; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 17145 - 17190
Alignment:
Q  1 tatttatagaggtggagggctgcagagccgttgcggtggcacacct 46  Q
    |||||||||||||||||||||||||||| ||||   ||||||||||    
T  17145 tatttatagaggtggagggctgcagagctgttgtaatggcacacct 17190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 100; Significance: 3e-49; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 5 - 273
Target Start/End: Complemental strand, 37362 - 37095
Alignment:
Q  5 tatagaggtggagggctgcagagccgttgcggtggcacacctgactctggcggttacgaaatcatgggaagtgtaaccgccagagagtttattgtgggaa 104  Q
    ||||||||||||||||||||||||||||| | |||||| || | |||||||||||| |||||| ||||||||||||||| ||||||| ||||||  ||||    
T  37362 tatagaggtggagggctgcagagccgttgtgatggcacgccaggctctggcggttatgaaatcgtgggaagtgtaaccg-cagagagattattgcaggaa 37264  T
Q  105 cgtgcaaagagacgttatggttcgtttgaaccagtctctttcgctctgtgcacccccttgt-gtgga-aaggagtgtgtcgcaagtaactttgccaaacg 202  Q
    | |||| |||||||||  |||| ||||||| | ||||   | ||||||||||||||  ||| | ||| |||| ||||||||||||||||  |||||||||    
T  37263 catgcagagagacgttgcggtttgtttgaatcggtcttgcttgctctgtgcacccc--tgtcgcggagaaggggtgtgtcgcaagtaacactgccaaacg 37166  T
Q  203 tggtgtttgagctttggattgtattgaacctaagtaaatgggccaaagatccttttggtcggtcgagaaca 273  Q
    |||| ||| || ||||||||||||||| |||||||||||||| ||||| ||||||||  ||||| ||||||    
T  37165 tggtattttagatttggattgtattgagcctaagtaaatgggtcaaagctccttttgaccggtccagaaca 37095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0483 (Bit Score: 91; Significance: 7e-44; HSPs: 1)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 51 - 249
Target Start/End: Original strand, 9243 - 9437
Alignment:
Q  51 ctggcggttacgaaatcatgggaagtgtaa-ccgccagagagtttattgtgggaacgtgcaaagagacgttatggttcgtttgaaccagtctctttcgct 149  Q
    ||||||||||||||||  |||||||||||| |||| |||||||||||||  |||||||||| ||||||||| |||||||||||||||||||    |||||    
T  9243 ctggcggttacgaaattgtgggaagtgtaaaccgctagagagtttattgcaggaacgtgcagagagacgttgtggttcgtttgaaccagtc----tcgct 9338  T
Q  150 ctgtgcacccccttgtgtggaaaggagtgtgtcgcaagtaactttgccaaacgtggtgtttgagctttggattgtattgaacctaagtaaatgggccaaa 249  Q
    | |||||||  || | | ||||||| ||||||||||||||| |||||||||||||||||||| |||||| || |||||| ||| ||||||||||||||||    
T  9339 ccgtgcacctgctcgcg-ggaaaggggtgtgtcgcaagtaattttgccaaacgtggtgtttgggctttgaatagtattggacccaagtaaatgggccaaa 9437  T

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Target: scaffold0111 (Bit Score: 90; Significance: 3e-43; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 5 - 276
Target Start/End: Complemental strand, 2967 - 2694
Alignment:
Q  5 tatagaggtggagggctgcagagccgttgcggtggcacacctgactctggcggttacgaaatcatgggaagtgtaaccgccagagagtttattgtgggaa 104  Q
    ||||||||||||| |||||||||| ||||   ||||||||| | ||||||||||||||||||| |||||||||||||||| |||||| |||||   ||||    
T  2967 tatagaggtggagagctgcagagctgttgtaatggcacaccaggctctggcggttacgaaatcgtgggaagtgtaaccgctagagagattattactggaa 2868  T
Q  105 cgtgcaaagagacgttatggttcgtttgaaccagtctctttcgctctgtgcacccccttgt-gtgga-aaggagtgtgtcgcaagtaactttgccaaacg 202  Q
    |||||| |||||| || || |||||||||||| ||||  ||||||| ||||||||||   | |  || ||||  ||||| ||||||||  ||||||||      
T  2867 cgtgcagagagacattgtgtttcgtttgaaccggtcttgttcgctccgtgcacccccccctcgcagagaagggttgtgtagcaagtaatgttgccaaaga 2768  T
Q  203 tggtgtttgagctttggattgtattgaacctaagtaaatgggccaaagatccttttggtcggtcgagaacagta 276  Q
    ||||||||| |||||| ||||||||   |||| ||||||||||||||| ||||||||||||||| | |||||||    
T  2767 tggtgtttgggctttgaattgtattaggcctatgtaaatgggccaaagctccttttggtcggtccaaaacagta 2694  T

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Target: scaffold1272 (Bit Score: 63; Significance: 4e-27; HSPs: 1)
Name: scaffold1272
Description:

Target: scaffold1272; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 167 - 273
Target Start/End: Original strand, 1968 - 2074
Alignment:
Q  167 tggaaaggagtgtgtcgcaagtaactttgccaaacgtggtgtttgagctttggattgtattgaacctaagtaaatgggccaaagatccttttggtcggtc 266  Q
    |||||||| ||||||||||||||| |||||||||||||||||||| |||||| || |||||| ||| ||||||||||||||||  ||||||||| |||||    
T  1968 tggaaaggggtgtgtcgcaagtaattttgccaaacgtggtgtttgggctttgaatagtattggacccaagtaaatgggccaaaactccttttggccggtc 2067  T
Q  267 gagaaca 273  Q
     ||||||    
T  2068 cagaaca 2074  T

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Target: scaffold0063 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 5 - 258
Target Start/End: Complemental strand, 36916 - 36664
Alignment:
Q  5 tatagaggtggagggctgcagagccgttgcggtggcacacctgactctggcggttacgaaatcatgggaagtgtaaccgccagagagtttattgtgggaa 104  Q
    |||||||||||  ||||| ||||||||||   |||||||| ||  || | ||||||||||||  |||||||||||||| ||| ||||    ||| |||||    
T  36916 tatagaggtgggtggctgtagagccgttgtaatggcacacgtgtgtccgacggttacgaaattgtgggaagtgtaacctccaaagagagatttgcgggaa 36817  T
Q  105 cgtgcaaagagacgttatggttcgtttgaaccagtctctttcgctctgtgcacccccttgtgtggaaaggagtgtgtcgcaagtaactttgccaaacgtg 204  Q
    | ||| ||||||||||   ||||||||||||   ||||  | |||||||||| | | ||    || |||| |||||| || |||||  ||||||||||||    
T  36816 cttgcgaagagacgttgcagttcgtttgaactgttctcgcttgctctgtgcatctcgttcgcggggaaggggtgtgttgcgagtaatgttgccaaacgtg 36717  T
Q  205 gtgtttgagctttggattgtattgaacctaagtaaatgggccaaagatcctttt 258  Q
    || |||| |||| ||||||||||| ||||||| ||||||| | |||||||||||    
T  36716 gtatttgggctt-ggattgtattggacctaagaaaatgggactaagatcctttt 36664  T

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Target: scaffold0011 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 273
Target Start/End: Complemental strand, 20425 - 20154
Alignment:
Q  1 tatttatagaggtggagggctgcagagccgttgcggtggcacacctgactctggcggttacgaaatcatgggaagtgtaaccgccagagagtttattgtg 100  Q
    ||||| |||||||||||||||||||||||||||   ||| |||| ||  ||  |||||||| ||||  |||||||||||||||| |||||  | ||||||    
T  20425 tatttttagaggtggagggctgcagagccgttgtaatggtacacttgggtcaagcggttacaaaattgtgggaagtgtaaccgctagagaaataattgtg 20326  T
Q  101 ggaacgtgcaaagagacgttatggttcgtttgaaccagtctctttcgctctgtgcaccccctt-gtgtggaaaggagtgtgtcgcaagtaactttgccaa 199  Q
    ||| | ||   |||||| |||||  |||||| |||  |||||  | |||||| |||||||||| | |  ||| || ||||||| |||||||  || ||||    
T  20325 ggagcatgttgagagacattatgactcgtttaaactggtctcgcttgctctgcgcacccccttcgcgatgaaggg-gtgtgtcacaagtaatatttccaa 20227  T
Q  200 acgtggtgtttgagctttggattgtattgaacctaagtaaatgggccaaagatccttttggtcggtcgagaaca 273  Q
    ||||||| |||| | ||||||||||||||  |||  ||||||||||| |||| ||||||| || ||| ||||||    
T  20226 acgtggtatttggg-tttggattgtattgctcctcggtaaatgggcctaagacccttttgatcagtctagaaca 20154  T

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Target: scaffold0321 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 193 - 275
Target Start/End: Original strand, 18227 - 18309
Alignment:
Q  193 ttgccaaacgtggtgtttgagctttggattgtattgaacctaagtaaatgggccaaagatccttttggtcggtcgagaacagt 275  Q
    ||||||| ||||| || ||||||||| || |||||   |||||||||||||||||||| ||||||||| ||||| | ||||||    
T  18227 ttgccaatcgtggagtctgagctttgaatagtatttggcctaagtaaatgggccaaaggtccttttggccggtccaaaacagt 18309  T

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Target: scaffold0233 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0233
Description:

Target: scaffold0233; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 53 - 135
Target Start/End: Complemental strand, 16082 - 15998
Alignment:
Q  53 ggcggttacgaaatcatgggaagtgtaaccgccagagagtttattgtgggaacgtg--caaagagacgttatggttcgtttgaac 135  Q
    ||||||||||||||| ||||||||||||||||| | ||| |  | |||||||||||   ||||| ||||||  ||||||||||||    
T  16082 ggcggttacgaaatcgtgggaagtgtaaccgccggtgagatattcgtgggaacgtggataaagatacgttacagttcgtttgaac 15998  T

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Target: scaffold0299 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 19209 - 19237
Alignment:
Q  1 tatttatagaggtggagggctgcagagcc 29  Q
    |||||||||||||||||||||||||||||    
T  19209 tatttatagaggtggagggctgcagagcc 19237  T

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