View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF19175_high_57 (Length: 391)
Name: NF19175_high_57
Description: NF19175
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19175_high_57 |
 | |
|
| [»] scaffold0006 (4 HSPs) |
| | |
|
| [»] scaffold0069 (1 HSPs) |
| | |
|
| [»] scaffold0068 (1 HSPs) |
| | |
|
| [»] scaffold1480 (1 HSPs) |
| | |
|
| [»] scaffold0406 (1 HSPs) |
| | |
|
Alignment Details
Target: chr1 (Bit Score: 340; Significance: 0; HSPs: 15)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 340; E-Value: 0
Query Start/End: Original strand, 14 - 377
Target Start/End: Original strand, 20364884 - 20365247
Alignment:
| Q |
14 |
gaaacgaaaatcaatggatattttaatttctgttgttgcaaaaatagcagaatataccgttgtgcctattggacgtcaagcaagttacttgatattctac |
113 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
20364884 |
gaaacgaaaatcaatggatattttaatttctgttgttgcaaaaatagcagaatataccgttgtgcctattggacgtcaagcaagttacttgatattctac |
20364983 |
T |
|
| Q |
114 |
aaaggcaacttcaagaagttaaaggatcaagttgaagaccttcaggctgcaagagaaagcctgctccattcggttgaaagagaaaggggaaatggtagag |
213 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
20364984 |
aaaggcaacttcaagaagttaaaggatcatgttgaagaccttcaggctgcaagagaaataatgctccattcggttgcaagagaaaggggaaatggtagag |
20365083 |
T |
|
| Q |
214 |
aaattgaaaaagatgttctaaattggttggagaaagtgaacgaggtcattgaaaatgcaaatcggcttcaaaacgatcctcgtcgtcccaatgttaggtg |
313 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
20365084 |
aaattgaaaaacatgttctaaattggttggagaaagtgaacgaggtcattgaaaatgcaaatcggcttcaaaacgatcctcgtcgtcccaatgttaggtg |
20365183 |
T |
|
| Q |
314 |
ctcagcatggtcattccccaacttgattttacgtcatcaactaagtaggaaagctacaaaaatt |
377 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
20365184 |
ctcagcatggtcattccccaacttgattttacgtcatcaactaagtaggaaagctacaaaaatt |
20365247 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 314; E-Value: 1e-177
Query Start/End: Original strand, 20 - 377
Target Start/End: Original strand, 13666999 - 13667356
Alignment:
| Q |
20 |
aaaatcaatggatattttaatttctgttgttgcaaaaatagcagaatataccgttgtgcctattggacgtcaagcaagttacttgatattctacaaaggc |
119 |
Q |
| |
|
|||||||||||| ||||||| ||||||||||| ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13666999 |
aaaatcaatggaaattttaacttctgttgttggaaaaataacagaatataccattgtgcctattggacgtcaagcaagttacttgatattctacaaaggc |
13667098 |
T |
|
| Q |
120 |
aacttcaagaagttaaaggatcaagttgaagaccttcaggctgcaagagaaagcctgctccattcggttgaaagagaaaggggaaatggtagagaaattg |
219 |
Q |
| |
|
||||||||||||||||||||||| |||||| |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
13667099 |
aacttcaagaagttaaaggatcatgttgaaaaccttcaggctgcaagagaaagaatgctccattcggttgaaagagaaaggagaaatggtagagaaattg |
13667198 |
T |
|
| Q |
220 |
aaaaagatgttctaaattggttggagaaagtgaacgaggtcattgaaaatgcaaatcggcttcaaaacgatcctcgtcgtcccaatgttaggtgctcagc |
319 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13667199 |
aaaaagatgttctgaattggttggagaaagtgaacgaggtcattgaaaatgcaaatcggcttcaaaacgatcctcgtcgtcccaatgttaggtgctcagc |
13667298 |
T |
|
| Q |
320 |
atggtcattccccaacttgattttacgtcatcaactaagtaggaaagctacaaaaatt |
377 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13667299 |
atggtcattccccaacttgattttacgtcatcaactaagtaggaaagctacaaaaatt |
13667356 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 289; E-Value: 1e-162
Query Start/End: Original strand, 14 - 378
Target Start/End: Original strand, 13646470 - 13646834
Alignment:
| Q |
14 |
gaaacgaaaatcaatggatattttaatttctgttgttgcaaaaatagcagaatataccgttgtgcctattggacgtcaagcaagttacttgatattctac |
113 |
Q |
| |
|
||||| |||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13646470 |
gaaacaaaaatcaatggaaattttaatttctgttgttgcaaaaatagcagaatatactgttgtgcctattggacgtcaagcaagttacttgatattctac |
13646569 |
T |
|
| Q |
114 |
aaaggcaacttcaagaagttaaaggatcaagttgaagaccttcaggctgcaagagaaagcctgctccattcggttgaaagagaaaggggaaatggtagag |
213 |
Q |
| |
|
||||| |||||||||| |||||||||||| |||||||||||| |||||||||||||||| || |||||||||||||||||||||||||||||||||||| |
|
|
| T |
13646570 |
aaaggtaacttcaagacgttaaaggatcatgttgaagaccttgaggctgcaagagaaagaatgatccattcggttgaaagagaaaggggaaatggtagag |
13646669 |
T |
|
| Q |
214 |
aaattgaaaaagatgttctaaattggttggagaaagtgaacgaggtcattgaaaatgcaaatcggcttcaaaacgatcctcgtcgtcccaatgttaggtg |
313 |
Q |
| |
|
| ||||||||||||||||| ||||||||||||||||||||||||||||||||||| || ||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13646670 |
acattgaaaaagatgttctgaattggttggagaaagtgaacgaggtcattgaaaaggcgaatgggcttcaaaacgatcctcgtcgtcccaatgttaggtg |
13646769 |
T |
|
| Q |
314 |
ctcagcatggtcattccccaacttgattttacgtcatcaactaagtaggaaagctacaaaaattg |
378 |
Q |
| |
|
|||| |||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
13646770 |
ctcaacatggttgttccccaacttgattttacgtcatcaactaagtaggaaagccacaaaaattg |
13646834 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 14 - 378
Target Start/End: Original strand, 20473959 - 20474323
Alignment:
| Q |
14 |
gaaacgaaaatcaatggatattttaatttctgttgttgcaaaaatagcagaatataccgttgtgcctattggacgtcaagcaagttacttgatattctac |
113 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
20473959 |
gaaacgaaaatcaatggatattttaatttctgttgttgcaaaaatagcagaatataccgttgtgcctattggacgtcaagcaagttacttgatattctac |
20474058 |
T |
|
| Q |
114 |
aaaggcaacttcaagaagttaaaggatcaagttgaagaccttcaggctgcaagagaaagcctgctccattcggttgaaagagaaaggggaaatggtagag |
213 |
Q |
| |
|
||||| |||||||||| |||||||||||| |||||||||||| |||||||||||||||| || ||||||| ||||||||||||||||||||||||| || |
|
|
| T |
20474059 |
aaaggtaacttcaagatgttaaaggatcatgttgaagaccttgaggctgcaagagaaagaatgatccattccgttgaaagagaaaggggaaatggtaaag |
20474158 |
T |
|
| Q |
214 |
aaattgaaaaagatgttctaaattggttggagaaagtgaacgaggtcattgaaaatgcaaatcggcttcaaaacgatcctcgtcgtcccaatgttaggtg |
313 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||| ||||||| ||| |||||| ||||||||||||||||||||||| |||||| ||||| |
|
|
| T |
20474159 |
aaattgaaaaagatgttctgaattggttggagaaagtgaacggggtcattcaaatggcaaatgggcttcaaaacgatcctcgtcgtgccaatgccaggtg |
20474258 |
T |
|
| Q |
314 |
ctcagcatggtcattccccaacttgattttacgtcatcaactaagtaggaaagctacaaaaattg |
378 |
Q |
| |
|
|||| ||| || |||||||||||| |||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
20474259 |
ctcaacattgttgttccccaacttggttttacgtcatcaactaagtaggaaagccacaaaaattg |
20474323 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 14 - 378
Target Start/End: Complemental strand, 20557593 - 20557229
Alignment:
| Q |
14 |
gaaacgaaaatcaatggatattttaatttctgttgttgcaaaaatagcagaatataccgttgtgcctattggacgtcaagcaagttacttgatattctac |
113 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
20557593 |
gaaacgaaaatcaatggatattttaatttctgttgttgcaaaaatagcagaatataccgttgtgcctattggacgtcaagcaagttacttgatattctac |
20557494 |
T |
|
| Q |
114 |
aaaggcaacttcaagaagttaaaggatcaagttgaagaccttcaggctgcaagagaaagcctgctccattcggttgaaagagaaaggggaaatggtagag |
213 |
Q |
| |
|
||||| |||||||||| |||||||||||| |||||||||||| |||||||||||||||| || ||||||| ||||||||||||||||||||||||| || |
|
|
| T |
20557493 |
aaaggtaacttcaagatgttaaaggatcatgttgaagaccttgaggctgcaagagaaagaatgatccattccgttgaaagagaaaggggaaatggtaaag |
20557394 |
T |
|
| Q |
214 |
aaattgaaaaagatgttctaaattggttggagaaagtgaacgaggtcattgaaaatgcaaatcggcttcaaaacgatcctcgtcgtcccaatgttaggtg |
313 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||| ||||||| ||| |||||| ||||||||||||||||||||||| |||||| ||||| |
|
|
| T |
20557393 |
aaattgaaaaagatgttctgaattggttggagaaagtgaacggggtcattcaaatggcaaatgggcttcaaaacgatcctcgtcgtgccaatgccaggtg |
20557294 |
T |
|
| Q |
314 |
ctcagcatggtcattccccaacttgattttacgtcatcaactaagtaggaaagctacaaaaattg |
378 |
Q |
| |
|
|||| ||| || |||||||||||| |||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
20557293 |
ctcaacattgttgttccccaacttggttttacgtcatcaactaagtaggaaagccacaaaaattg |
20557229 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 14 - 378
Target Start/End: Complemental strand, 19142561 - 19142197
Alignment:
| Q |
14 |
gaaacgaaaatcaatggatattttaatttctgttgttgcaaaaatagcagaatataccgttgtgcctattggacgtcaagcaagttacttgatattctac |
113 |
Q |
| |
|
|||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
19142561 |
gaaacgaaaatcaatggaaattttaatttcttttgttgcaaaaatagcagaatataccgttgtgcctattgggcgtcaagcaagttacttgatattctac |
19142462 |
T |
|
| Q |
114 |
aaaggcaacttcaagaagttaaaggatcaagttgaagaccttcaggctgcaagagaaagcctgctccattcggttgaaagagaaaggggaaatggtagag |
213 |
Q |
| |
|
||||| |||||||||| |||||||||||| ||||||||||| |||||||||||||||| || ||||||||||||||||||||||||||||||||| || |
|
|
| T |
19142461 |
aaaggtaacttcaagacgttaaaggatcatgttgaagacctcgaggctgcaagagaaagaatgatccattcggttgaaagagaaaggggaaatggtaaag |
19142362 |
T |
|
| Q |
214 |
aaattgaaaaagatgttctaaattggttggagaaagtgaacgaggtcattgaaaatgcaaatcggcttcaaaacgatcctcgtcgtcccaatgttaggtg |
313 |
Q |
| |
|
| ||||||||||||||||| ||||||||||||||||||||||||||||||||||| | ||| ||||||||||||||||||| ||| ||||||| |||| |
|
|
| T |
19142361 |
agattgaaaaagatgttctgaattggttggagaaagtgaacgaggtcattgaaaaggtgaatgggcttcaaaacgatcctcgccgtgccaatgtccggtg |
19142262 |
T |
|
| Q |
314 |
ctcagcatggtcattccccaacttgattttacgtcatcaactaagtaggaaagctacaaaaattg |
378 |
Q |
| |
|
|||| ||| ||| ||| |||||||| ||||| |||||||||||||||||||||| |||||||||| |
|
|
| T |
19142261 |
ctcaacattgtcgttctccaacttggttttatgtcatcaactaagtaggaaagccacaaaaattg |
19142197 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 14 - 378
Target Start/End: Original strand, 13539648 - 13540012
Alignment:
| Q |
14 |
gaaacgaaaatcaatggatattttaatttctgttgttgcaaaaatagcagaatataccgttgtgcctattggacgtcaagcaagttacttgatattctac |
113 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13539648 |
gaaacgaaaatcaatggaaattttaatttctgttgttgcaaaaatagcagaatataccgttgtgcctattggacgtcaagcaagttacttgatattctac |
13539747 |
T |
|
| Q |
114 |
aaaggcaacttcaagaagttaaaggatcaagttgaagaccttcaggctgcaagagaaagcctgctccattcggttgaaagagaaaggggaaatggtagag |
213 |
Q |
| |
|
|||| || || ||| ||||||||||| |||||||||||| | ||||||||||| || |||||||||| |||||||||||||||||||||| || |
|
|
| T |
13539748 |
aaagttaattttaaggtattaaaggatcatgttgaagaccttgaagctgcaagagatgtaatgatccattcggtggaaagagaaaggggaaatggtaaag |
13539847 |
T |
|
| Q |
214 |
aaattgaaaaagatgttctaaattggttggagaaagtgaacgaggtcattgaaaatgcaaatcggcttcaaaacgatcctcgtcgtcccaatgttaggtg |
313 |
Q |
| |
|
||||||||||| ||||| | ||||||||||||||||||||||||||||||||||| || ||| | |||||||| || ||||| ||| |||||||||||| |
|
|
| T |
13539848 |
aaattgaaaaaaatgttttgaattggttggagaaagtgaacgaggtcattgaaaaggcgaattgccttcaaaatgaccctcgccgtttcaatgttaggtg |
13539947 |
T |
|
| Q |
314 |
ctcagcatggtcattccccaacttgattttacgtcatcaactaagtaggaaagctacaaaaattg |
378 |
Q |
| |
|
|||||||| ||| ||||| |||||| |||||||||||||| ||||||||||||| |||||||||| |
|
|
| T |
13539948 |
ctcagcatcgtcgttccctaacttggttttacgtcatcaattaagtaggaaagccacaaaaattg |
13540012 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 20 - 378
Target Start/End: Original strand, 13681084 - 13681442
Alignment:
| Q |
20 |
aaaatcaatggatattttaatttctgttgttgcaaaaatagcagaatataccgttgtgcctattggacgtcaagcaagttacttgatattctacaaaggc |
119 |
Q |
| |
|
|||||||||||| |||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
13681084 |
aaaatcaatggaaattttaatttctattgttggaaaaatagcagaatataccgttgtgcctattggacgtcaaacaagttacttgatattctacaaaggt |
13681183 |
T |
|
| Q |
120 |
aacttcaagaagttaaaggatcaagttgaagaccttcaggctgcaagagaaagcctgctccattcggttgaaagagaaaggggaaatggtagagaaattg |
219 |
Q |
| |
|
|||||||||| |||||||||||| |||||||||||| |||||||||||||||| || ||||||| |||||||| ||||||| |||||||| |||||||| |
|
|
| T |
13681184 |
aacttcaagacgttaaaggatcatgttgaagaccttgaggctgcaagagaaagaatgatccattcagttgaaagtgaaagggaaaatggtaaagaaattg |
13681283 |
T |
|
| Q |
220 |
aaaaagatgttctaaattggttggagaaagtgaacgaggtcattgaaaatgcaaatcggcttcaaaacgatcctcgtcgtcccaatgttaggtgctcagc |
319 |
Q |
| |
|
||||||||||||| |||||||||||||||||| | | ||||||| || || |||| ||||||||||||| |||| | | ||||||||||||||| | |
|
|
| T |
13681284 |
aaaaagatgttctgaattggttggagaaagtggatggggtcattaaagtggcgaatcagcttcaaaacgattctcgcaatgcaaatgttaggtgctcacc |
13681383 |
T |
|
| Q |
320 |
atggtcattccccaacttgattttacgtcatcaactaagtaggaaagctacaaaaattg |
378 |
Q |
| |
|
|||||||||||| || || ||||| |||||||||||||||||||| || | |||||||| |
|
|
| T |
13681384 |
atggtcattcccaaatttaattttgcgtcatcaactaagtaggaatgccagaaaaattg |
13681442 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 14 - 378
Target Start/End: Complemental strand, 15902909 - 15902545
Alignment:
| Q |
14 |
gaaacgaaaatcaatggatattttaatttctgttgttgcaaaaatagcagaatataccgttgtgcctattggacgtcaagcaagttacttgatattctac |
113 |
Q |
| |
|
|||| ||||||||||||| || |||||||||||||||| |||||||||||||||||| ||||||||||| ||||||| |||||||||||| ||||||||| |
|
|
| T |
15902909 |
gaaaagaaaatcaatggaaatcttaatttctgttgttggaaaaatagcagaatatacagttgtgcctatcggacgtctagcaagttacttaatattctac |
15902810 |
T |
|
| Q |
114 |
aaaggcaacttcaagaagttaaaggatcaagttgaagaccttcaggctgcaagagaaagcctgctccattcggttgaaagagaaaggggaaatggtagag |
213 |
Q |
| |
|
|||| |||||||||| ||||| |||| |||| ||||||| |||||||||||||||| || |||||| |||| ||| ||||||||||||||||||| |
|
|
| T |
15902809 |
aaagataacttcaagacattaaacaatcatgttggagaccttgaggctgcaagagaaagagtgaaccattcagttgcaagtgaaaggggaaatggtagag |
15902710 |
T |
|
| Q |
214 |
aaattgaaaaagatgttctaaattggttggagaaagtgaacgaggtcattgaaaatgcaaatcggcttcaaaacgatcctcgtcgtcccaatgttaggtg |
313 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||| ||| ||||||| || | || |||| |||||||||||||||||| |||||||||| | |||| |
|
|
| T |
15902709 |
aaattgaaaaagatgttctgaattggttggagaaagtggacggggtcattaaagaggcgaatcagcttcaaaacgatcctcgccgtcccaatggtgggtg |
15902610 |
T |
|
| Q |
314 |
ctcagcatggtcattccccaacttgattttacgtcatcaactaagtaggaaagctacaaaaattg |
378 |
Q |
| |
|
|||||||| ||| ||||| |||||| ||||||||||||||||||||||||| || |||||||||| |
|
|
| T |
15902609 |
ctcagcattgtcgttccctaacttggttttacgtcatcaactaagtaggaatgccacaaaaattg |
15902545 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 14 - 377
Target Start/End: Original strand, 13580729 - 13581092
Alignment:
| Q |
14 |
gaaacgaaaatcaatggatattttaatttctgttgttgcaaaaatagcagaatataccgttgtgcctattggacgtcaagcaagttacttgatattctac |
113 |
Q |
| |
|
|||| ||||||||||||| ||||||| |||| |||||| ||||||| ||||||||||||||| |||||||| ||||||||||| | |||||||||||||| |
|
|
| T |
13580729 |
gaaaagaaaatcaatggaaattttaacttctattgttggaaaaataacagaatataccgttgagcctattgtacgtcaagcaaatcacttgatattctac |
13580828 |
T |
|
| Q |
114 |
aaaggcaacttcaagaagttaaaggatcaagttgaagaccttcaggctgcaagagaaagcctgctccattcggttgaaagagaaaggggaaatggtagag |
213 |
Q |
| |
|
||||| ||||||||||| ||||| ||| |||||| ||||| ||| | |||||||||| | ||||| ||||||||| |||| ||||||||| || |
|
|
| T |
13580829 |
aaaggtaacttcaagaaattaaaagatagtgttgaacaccttgaggatacaagagaaagaataatccataaggttgaaagtgaaacccgaaatggtaaag |
13580928 |
T |
|
| Q |
214 |
aaattgaaaaagatgttctaaattggttggagaaagtgaacgaggtcattgaaaatgcaaatcggcttcaaaacgatcctcgtcgtcccaatgttaggtg |
313 |
Q |
| |
|
|||||||||||||||| | ||||||||| ||||||| || ||||||||||||| ||||| ||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
13580929 |
taattgaaaaagatgttacagattggttggtgaaagtggacaaggtcattgaaaaggcaaaatggcttcaaaacgatcctcgtcatcccaatgttaggtg |
13581028 |
T |
|
| Q |
314 |
ctcagcatggtcattccccaacttgattttacgtcatcaactaagtaggaaagctacaaaaatt |
377 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13581029 |
ctcagcatggtcattccccaacttgattttacgtcatcaactaagtaggaaagctacaaaaatt |
13581092 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 20 - 378
Target Start/End: Original strand, 13418519 - 13418877
Alignment:
| Q |
20 |
aaaatcaatggatattttaatttctgttgttgcaaaaatagcagaatataccgttgtgcctattggacgtcaagcaagttacttgatattctacaaaggc |
119 |
Q |
| |
|
|||||||||||| |||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13418519 |
aaaatcaatggaaattttaatttctattgttggaaaaatagcagaatataccgttgtgcctattggacgtcaagcaagttacttgatattctacaaaggt |
13418618 |
T |
|
| Q |
120 |
aacttcaagaagttaaaggatcaagttgaagaccttcaggctgcaagagaaagcctgctccattcggttgaaagagaaaggggaaatggtagagaaattg |
219 |
Q |
| |
|
||||||||| |||||||||||| |||||||||||| |||||||||||||||| || ||||||| ||| |||| ||||||| |||||||| |||||||| |
|
|
| T |
13418619 |
tacttcaagacgttaaaggatcatgttgaagaccttgaggctgcaagagaaagaatgatccattcagttaaaagtgaaagggaaaatggtaaagaaattg |
13418718 |
T |
|
| Q |
220 |
aaaaagatgttctaaattggttggagaaagtgaacgaggtcattgaaaatgcaaatcggcttcaaaacgatcctcgtcgtcccaatgttaggtgctcagc |
319 |
Q |
| |
|
||||||||||| | |||||||||||||||||| | | ||||||| || | || |||| |||||||||||| ||| | | ||||||||||||||| | |
|
|
| T |
13418719 |
aaaaagatgttatgaattggttggagaaagtggatggggtcattaaagaggcgaatcaacttcaaaacgattctcacaatgcaaatgttaggtgctcacc |
13418818 |
T |
|
| Q |
320 |
atggtcattccccaacttgattttacgtcatcaactaagtaggaaagctacaaaaattg |
378 |
Q |
| |
|
|||||||||||| || || ||||| |||||||||||||||||||| || |||||||||| |
|
|
| T |
13418819 |
atggtcattcccaaatttaattttgcgtcatcaactaagtaggaatgccacaaaaattg |
13418877 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 20 - 378
Target Start/End: Original strand, 13502417 - 13502775
Alignment:
| Q |
20 |
aaaatcaatggatattttaatttctgttgttgcaaaaatagcagaatataccgttgtgcctattggacgtcaagcaagttacttgatattctacaaaggc |
119 |
Q |
| |
|
|||||||||||| |||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13502417 |
aaaatcaatggaaattttaatttctattgttggaaaaatagcagaatataccgttgtgcctattggacgtcaagcaagttacttgatattctacaaaggt |
13502516 |
T |
|
| Q |
120 |
aacttcaagaagttaaaggatcaagttgaagaccttcaggctgcaagagaaagcctgctccattcggttgaaagagaaaggggaaatggtagagaaattg |
219 |
Q |
| |
|
|||||||||| |||||| |||| |||| ||||||| |||||||||||||||| || ||||||| ||| |||| ||||||| |||||||| |||||||| |
|
|
| T |
13502517 |
aacttcaagatgttaaattatcatgttgtagaccttgaggctgcaagagaaagaatgatccattcagtttaaagtgaaagggaaaatggtaaagaaattg |
13502616 |
T |
|
| Q |
220 |
aaaaagatgttctaaattggttggagaaagtgaacgaggtcattgaaaatgcaaatcggcttcaaaacgatcctcgtcgtcccaatgttaggtgctcagc |
319 |
Q |
| |
|
||||||||||||| |||||||||||||||||| | | ||||||| || || |||| |||||||||||| ||| | | ||||||||||||||| | |
|
|
| T |
13502617 |
aaaaagatgttctgaattggttggagaaagtggatggggtcattaaagtggcgaatcatcttcaaaacgattctctcaatgcaaatgttaggtgctcacc |
13502716 |
T |
|
| Q |
320 |
atggtcattccccaacttgattttacgtcatcaactaagtaggaaagctacaaaaattg |
378 |
Q |
| |
|
|||||||| || || || ||||| |||||||||||||||||||| || |||||||||| |
|
|
| T |
13502717 |
ttggtcatttccaaatttaattttgcgtcatcaactaagtaggaatgccacaaaaattg |
13502775 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 20 - 378
Target Start/End: Original strand, 13606997 - 13607355
Alignment:
| Q |
20 |
aaaatcaatggatattttaatttctgttgttgcaaaaatagcagaatataccgttgtgcctattggacgtcaagcaagttacttgatattctacaaaggc |
119 |
Q |
| |
|
|||||||||||| |||||||||||| |||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
13606997 |
aaaatcaatggaaattttaatttctattgttggaaaaatagcagaatatactgttgtgcctattggacgtcaagcaagttacttaatattctacaaaggt |
13607096 |
T |
|
| Q |
120 |
aacttcaagaagttaaaggatcaagttgaagaccttcaggctgcaagagaaagcctgctccattcggttgaaagagaaaggggaaatggtagagaaattg |
219 |
Q |
| |
|
|||||||||| |||||| |||| |||| ||||||| |||||||||||||||| || ||||||| ||| |||| ||||||| |||||||| |||||||| |
|
|
| T |
13607097 |
aacttcaagacgttaaacaatcatgttggagaccttgaggctgcaagagaaagaatgatccattcagttaaaagtgaaagggaaaatggtaaagaaattg |
13607196 |
T |
|
| Q |
220 |
aaaaagatgttctaaattggttggagaaagtgaacgaggtcattgaaaatgcaaatcggcttcaaaacgatcctcgtcgtcccaatgttaggtgctcagc |
319 |
Q |
| |
|
||||||||||||| |||||||||||||||||| | | ||||||| || | || |||| |||||||||||| ||| | | ||||||||||||||| | |
|
|
| T |
13607197 |
aaaaagatgttctgaattggttggagaaagtggatggggtcattaaagaggcgaatcaacttcaaaacgattctcacaatgcaaatgttaggtgctcacc |
13607296 |
T |
|
| Q |
320 |
atggtcattccccaacttgattttacgtcatcaactaagtaggaaagctacaaaaattg |
378 |
Q |
| |
|
||||||||| || || || ||||| |||||||||||||||||||| || |||||||||| |
|
|
| T |
13607297 |
atggtcatttccaaatttaattttgcgtcatcaactaagtaggaatgccacaaaaattg |
13607355 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 25 - 374
Target Start/End: Complemental strand, 16472107 - 16471758
Alignment:
| Q |
25 |
caatggatattttaatttctgttgttgcaaaaatagcagaatataccgttgtgcctattggacgtcaagcaagttacttgatattctacaaaggcaactt |
124 |
Q |
| |
|
||||||| |||||| ||||||||||| |||| ||||||| ||||| ||||| || |||||||||||||||||||||||||||||||||||| ||| || |
|
|
| T |
16472107 |
caatggaaattttatcttctgttgttggaaaagtagcagattatactgttgtttctgttggacgtcaagcaagttacttgatattctacaaagccaattt |
16472008 |
T |
|
| Q |
125 |
caagaagttaaaggatcaagttgaagaccttcaggctgcaagagaaagcctgctccattcggttgaaagagaaaggggaaatggtagagaaattgaaaaa |
224 |
Q |
| |
|
||||| |||| | ||| ||| |||||||| ||| ||||| ||||| | | |||||||||||| ||||||| ||||||||| |||||| |||| | |
|
|
| T |
16472007 |
caagatgttagcagttcacgttaaagaccttgaggtcgcaagggaaagaataattcattcggttgaagaagaaaggagaaatggtaaagaaatcgaaaga |
16471908 |
T |
|
| Q |
225 |
gatgttctaaattggttggagaaagtgaacgaggtcattgaaaatgcaaatcggcttcaaaacgatcctcgtcgtcccaatgttaggtgctcagcatggt |
324 |
Q |
| |
|
|||||| | || ||||| || | ||||| |||||||||||||| || |||| |||||||| |||||||||||| | ||||||||||||||| |||||| |
|
|
| T |
16471907 |
gatgttgtgaactggttagatatggtgaatgaggtcattgaaaaggcgaatcagcttcaaagagatcctcgtcgtgcaaatgttaggtgctcaacatggt |
16471808 |
T |
|
| Q |
325 |
cattccccaacttgattttacgtcatcaactaagtaggaaagctacaaaa |
374 |
Q |
| |
|
| |||||||| |||||||| ||||| |||||||||||||||| |||||| |
|
|
| T |
16471807 |
cgttccccaatttgattttgtgtcatgaactaagtaggaaagccacaaaa |
16471758 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 14 - 118
Target Start/End: Complemental strand, 20546027 - 20545923
Alignment:
| Q |
14 |
gaaacgaaaatcaatggatattttaatttctgttgttgcaaaaatagcagaatataccgttgtgcctattggacgtcaagcaagttacttgatattctac |
113 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
20546027 |
gaaacgaaaatcaatggatattttaatttctgttgttgcaaaaatagcagaatataccgttgtgcctattggacgtcaagcaagttacttgatattctac |
20545928 |
T |
|
| Q |
114 |
aaagg |
118 |
Q |
| |
|
||||| |
|
|
| T |
20545927 |
aaagg |
20545923 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0006 (Bit Score: 314; Significance: 1e-177; HSPs: 4)
Name: scaffold0006
Description:
Target: scaffold0006; HSP #1
Raw Score: 314; E-Value: 1e-177
Query Start/End: Original strand, 20 - 377
Target Start/End: Original strand, 164614 - 164971
Alignment:
| Q |
20 |
aaaatcaatggatattttaatttctgttgttgcaaaaatagcagaatataccgttgtgcctattggacgtcaagcaagttacttgatattctacaaaggc |
119 |
Q |
| |
|
|||||||||||| ||||||| ||||||||||| ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
164614 |
aaaatcaatggaaattttaacttctgttgttggaaaaataacagaatataccattgtgcctattggacgtcaagcaagttacttgatattctacaaaggc |
164713 |
T |
|
| Q |
120 |
aacttcaagaagttaaaggatcaagttgaagaccttcaggctgcaagagaaagcctgctccattcggttgaaagagaaaggggaaatggtagagaaattg |
219 |
Q |
| |
|
||||||||||||||||||||||| |||||| |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
164714 |
aacttcaagaagttaaaggatcatgttgaaaaccttcaggctgcaagagaaagaatgctccattcggttgaaagagaaaggagaaatggtagagaaattg |
164813 |
T |
|
| Q |
220 |
aaaaagatgttctaaattggttggagaaagtgaacgaggtcattgaaaatgcaaatcggcttcaaaacgatcctcgtcgtcccaatgttaggtgctcagc |
319 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
164814 |
aaaaagatgttctgaattggttggagaaagtgaacgaggtcattgaaaatgcaaatcggcttcaaaacgatcctcgtcgtcccaatgttaggtgctcagc |
164913 |
T |
|
| Q |
320 |
atggtcattccccaacttgattttacgtcatcaactaagtaggaaagctacaaaaatt |
377 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
164914 |
atggtcattccccaacttgattttacgtcatcaactaagtaggaaagctacaaaaatt |
164971 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0006; HSP #2
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 14 - 377
Target Start/End: Original strand, 101029 - 101392
Alignment:
| Q |
14 |
gaaacgaaaatcaatggatattttaatttctgttgttgcaaaaatagcagaatataccgttgtgcctattggacgtcaagcaagttacttgatattctac |
113 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
101029 |
gaaacgaaaatcaatggagattttaatttctgttgttgcaaaaatagccgaatataccgttgtgccttttggacgtcaagcaagttacttgatattctac |
101128 |
T |
|
| Q |
114 |
aaaggcaacttcaagaagttaaaggatcaagttgaagaccttcaggctgcaagagaaagcctgctccattcggttgaaagagaaaggggaaatggtagag |
213 |
Q |
| |
|
||||| |||||||||| |||||||||| | |||||||| ||| ||||| |||||||||| || ||||| ||||||| |||||| |||||||| || |
|
|
| T |
101129 |
aaaggtaacttcaagacgttaaaggataatgttgaagatcttgaggctacaagagaaagaatgaaccatttggttgaaggagaaacacaaaatggtaaag |
101228 |
T |
|
| Q |
214 |
aaattgaaaaagatgttctaaattggttggagaaagtgaacgaggtcattgaaaatgcaaatcggcttcaaaacgatcctcgtcgtcccaatgttaggtg |
313 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||||||||||| |||||||| || ||| |||| |||||||||||||| | |||||||||| || |
|
|
| T |
101229 |
taattgaaaaagatgttctgaattggttggagaaagtgaacgaggttattgaaaaggcgaatgggctccaaaacgatcctcgcaatgccaatgttagctg |
101328 |
T |
|
| Q |
314 |
ctcagcatggtcattccccaacttgattttacgtcatcaactaagtaggaaagctacaaaaatt |
377 |
Q |
| |
|
|||||||||| | |||||||||||||||||||| |||||||||||||||||||| ||||||||| |
|
|
| T |
101329 |
ctcagcatggccgttccccaacttgattttacgacatcaactaagtaggaaagccacaaaaatt |
101392 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0006; HSP #3
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 20 - 378
Target Start/End: Original strand, 51263 - 51621
Alignment:
| Q |
20 |
aaaatcaatggatattttaatttctgttgttgcaaaaatagcagaatataccgttgtgcctattggacgtcaagcaagttacttgatattctacaaaggc |
119 |
Q |
| |
|
|||||||||||| ||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |
|
|
| T |
51263 |
aaaatcaatggaaattttaatttcgattgttggaaaaatagcagaatataccgttgtgcctattggacgtcaagcaaaatacttgatattctacaatggt |
51362 |
T |
|
| Q |
120 |
aacttcaagaagttaaaggatcaagttgaagaccttcaggctgcaagagaaagcctgctccattcggttgaaagagaaaggggaaatggtagagaaattg |
219 |
Q |
| |
|
|||||||||| |||||||||||| |||| ||||||| | ||||||||||| || |||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
51363 |
aacttcaagacgttaaaggatcatgttggagaccttgaagctgcaagagatagagtgctccattcagttgaaagagaaaggggaaatggtagagaaattg |
51462 |
T |
|
| Q |
220 |
aaaaagatgttctaaattggttggagaaagtgaacgaggtcattgaaaatgcaaatcggcttcaaaacgatcctcgtcgtcccaatgttaggtgctcagc |
319 |
Q |
| |
|
|| |||||||||| |||||||||||||||||| ||| ||||||| || | || |||| ||||||||||||| |||| | | ||||||||||||||| | |
|
|
| T |
51463 |
aagaagatgttctgaattggttggagaaagtggacggggtcattaaagaggcgaatcagcttcaaaacgattctcgcaatgcaaatgttaggtgctcacc |
51562 |
T |
|
| Q |
320 |
atggtcattccccaacttgattttacgtcatcaactaagtaggaaagctacaaaaattg |
378 |
Q |
| |
|
||||||||||| || || ||||| |||||||||||||||||||| || |||||||||| |
|
|
| T |
51563 |
ttggtcattcccaaatttaattttgcgtcatcaactaagtaggaatgccacaaaaattg |
51621 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0006; HSP #4
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 20 - 378
Target Start/End: Original strand, 135657 - 136015
Alignment:
| Q |
20 |
aaaatcaatggatattttaatttctgttgttgcaaaaatagcagaatataccgttgtgcctattggacgtcaagcaagttacttgatattctacaaaggc |
119 |
Q |
| |
|
|||||||||||| |||||||||||| |||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
135657 |
aaaatcaatggaaattttaatttctattgttggaaaaatagcagaatatactgttgtgcctattggacgtcaagcaagttacttaatattctacaaaggt |
135756 |
T |
|
| Q |
120 |
aacttcaagaagttaaaggatcaagttgaagaccttcaggctgcaagagaaagcctgctccattcggttgaaagagaaaggggaaatggtagagaaattg |
219 |
Q |
| |
|
|||||||||| |||||| |||| |||| ||||||| |||||||||||||||| || ||||||| ||| |||| ||||||| |||||||| |||||||| |
|
|
| T |
135757 |
aacttcaagacgttaaacaatcatgttggagaccttgaggctgcaagagaaagaatgatccattcagttaaaagtgaaagggaaaatggtaaagaaattg |
135856 |
T |
|
| Q |
220 |
aaaaagatgttctaaattggttggagaaagtgaacgaggtcattgaaaatgcaaatcggcttcaaaacgatcctcgtcgtcccaatgttaggtgctcagc |
319 |
Q |
| |
|
||||||||||||| |||||||||||||||||| | | ||||||| || | || |||| |||||||||||| ||| | | ||||||||||||||| | |
|
|
| T |
135857 |
aaaaagatgttctgaattggttggagaaagtggatggggtcattaaagaggcgaatcaacttcaaaacgattctcacaatgcaaatgttaggtgctcacc |
135956 |
T |
|
| Q |
320 |
atggtcattccccaacttgattttacgtcatcaactaagtaggaaagctacaaaaattg |
378 |
Q |
| |
|
||||||||| || || || ||||| |||||||||||||||||||| || |||||||||| |
|
|
| T |
135957 |
atggtcatttccaaatttaattttgcgtcatcaactaagtaggaatgccacaaaaattg |
136015 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0069 (Bit Score: 269; Significance: 1e-150; HSPs: 1)
Name: scaffold0069
Description:
Target: scaffold0069; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 14 - 378
Target Start/End: Original strand, 22893 - 23257
Alignment:
| Q |
14 |
gaaacgaaaatcaatggatattttaatttctgttgttgcaaaaatagcagaatataccgttgtgcctattggacgtcaagcaagttacttgatattctac |
113 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22893 |
gaaacgaaaatcaatggaaattttaatttctgttgttgcaaaaatagcagaatataccgttgtgcctattggacgtcaagcaagttacttgatattctac |
22992 |
T |
|
| Q |
114 |
aaaggcaacttcaagaagttaaaggatcaagttgaagaccttcaggctgcaagagaaagcctgctccattcggttgaaagagaaaggggaaatggtagag |
213 |
Q |
| |
|
||||| |||||||||| |||||||||||| |||||||||||| |||||||||||||||| || ||||||||||||||| ||||||||||||||||| || |
|
|
| T |
22993 |
aaaggtaacttcaagacgttaaaggatcatgttgaagaccttgaggctgcaagagaaagaatgatccattcggttgaaaaagaaaggggaaatggtaaag |
23092 |
T |
|
| Q |
214 |
aaattgaaaaagatgttctaaattggttggagaaagtgaacgaggtcattgaaaatgcaaatcggcttcaaaacgatcctcgtcgtcccaatgttaggtg |
313 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||| ||||||| ||| |||||| |||||||||||||||||| |||| ||||||| ||||| |
|
|
| T |
23093 |
aaattgaaaaagatgttctgaattggttggagaaagtgaacggggtcattcaaatggcaaatgggcttcaaaacgatcctcttcgtgccaatgtcaggtg |
23192 |
T |
|
| Q |
314 |
ctcagcatggtcattccccaacttgattttacgtcatcaactaagtaggaaagctacaaaaattg |
378 |
Q |
| |
|
|||| ||| || ||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
23193 |
ctcaacattgttgttccccaacttgattttacgtcatcaactaagtaggaaagccacaaaaattg |
23257 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 261; Significance: 1e-145; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 14 - 378
Target Start/End: Original strand, 21810696 - 21811060
Alignment:
| Q |
14 |
gaaacgaaaatcaatggatattttaatttctgttgttgcaaaaatagcagaatataccgttgtgcctattggacgtcaagcaagttacttgatattctac |
113 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21810696 |
gaaacgaaaatcaatggaaattttaatttctgttgttgcaaaaatagcagaatataccgttgtgcctattggacgtcaagcaagttacttgatattctac |
21810795 |
T |
|
| Q |
114 |
aaaggcaacttcaagaagttaaaggatcaagttgaagaccttcaggctgcaagagaaagcctgctccattcggttgaaagagaaaggggaaatggtagag |
213 |
Q |
| |
|
||||| |||||||||| |||||||||||| |||||||||||| |||||||||||| ||| || ||||||||||||||||||||||||||||||||| || |
|
|
| T |
21810796 |
aaaggtaacttcaagacgttaaaggatcatgttgaagaccttgaggctgcaagagcaagaatgatccattcggttgaaagagaaaggggaaatggtaaag |
21810895 |
T |
|
| Q |
214 |
aaattgaaaaagatgttctaaattggttggagaaagtgaacgaggtcattgaaaatgcaaatcggcttcaaaacgatcctcgtcgtcccaatgttaggtg |
313 |
Q |
| |
|
||||||||||||||||||| ||| |||||||||||||||||||||| |||||||| || ||| |||| |||||||||||||| | |||||||||| || |
|
|
| T |
21810896 |
aaattgaaaaagatgttctgaatcggttggagaaagtgaacgaggttattgaaaaggcgaatgggctccaaaacgatcctcgcaatgccaatgttagctg |
21810995 |
T |
|
| Q |
314 |
ctcagcatggtcattccccaacttgattttacgtcatcaactaagtaggaaagctacaaaaattg |
378 |
Q |
| |
|
|||||||||| | |||||||||||||||||||| |||||||||||||||||||| |||||||||| |
|
|
| T |
21810996 |
ctcagcatggccgttccccaacttgattttacgacatcaactaagtaggaaagccacaaaaattg |
21811060 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 245; Significance: 1e-136; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 14 - 378
Target Start/End: Complemental strand, 20818429 - 20818065
Alignment:
| Q |
14 |
gaaacgaaaatcaatggatattttaatttctgttgttgcaaaaatagcagaatataccgttgtgcctattggacgtcaagcaagttacttgatattctac |
113 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
20818429 |
gaaacgaaaatcaatggaaattttaatttctgttgttgctaaaatagcagaatatacttttgtgcctattggacgtcaagcaagttacttgatattctac |
20818330 |
T |
|
| Q |
114 |
aaaggcaacttcaagaagttaaaggatcaagttgaagaccttcaggctgcaagagaaagcctgctccattcggttgaaagagaaaggggaaatggtagag |
213 |
Q |
| |
|
||||| |||||||||| |||||||||||| |||||||||||| |||| ||||||||||| || ||||||||||| ||||||||||||||||||||| || |
|
|
| T |
20818329 |
aaaggtaacttcaagacgttaaaggatcatgttgaagaccttgaggccgcaagagaaagaatgatccattcggttaaaagagaaaggggaaatggtaaag |
20818230 |
T |
|
| Q |
214 |
aaattgaaaaagatgttctaaattggttggagaaagtgaacgaggtcattgaaaatgcaaatcggcttcaaaacgatcctcgtcgtcccaatgttaggtg |
313 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || ||| | |||||||| || ||||| ||| |||||||||||| |
|
|
| T |
20818229 |
aaattgaaaaagatgttctgaattggttggagaaagtgaacgaggtcattgaaaaggcgaattgccttcaaaatgaccctcgccgtttcaatgttaggtg |
20818130 |
T |
|
| Q |
314 |
ctcagcatggtcattccccaacttgattttacgtcatcaactaagtaggaaagctacaaaaattg |
378 |
Q |
| |
|
|||||||| ||| ||||| |||||| |||||||||||||| ||||||||||||| |||||||||| |
|
|
| T |
20818129 |
ctcagcatcgtcgttccctaacttggttttacgtcatcaattaagtaggaaagccacaaaaattg |
20818065 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 232; Significance: 1e-128; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 14 - 377
Target Start/End: Complemental strand, 38061409 - 38061046
Alignment:
| Q |
14 |
gaaacgaaaatcaatggatattttaatttctgttgttgcaaaaatagcagaatataccgttgtgcctattggacgtcaagcaagttacttgatattctac |
113 |
Q |
| |
|
|||| ||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38061409 |
gaaaagaaaatcaatggaaattttaacttctgttgttgcaaaaatagcagaatataccgttgagcctattggacgtcaagcaagttacttgatattctac |
38061310 |
T |
|
| Q |
114 |
aaaggcaacttcaagaagttaaaggatcaagttgaagaccttcaggctgcaagagaaagcctgctccattcggttgaaagagaaaggggaaatggtagag |
213 |
Q |
| |
|
||||| ||||||||| ||||| ||| | |||||| ||||||||||||||||||||| || ||||||||||||| ||||||||||||||||||| || |
|
|
| T |
38061309 |
aaaggttacttcaagacgttaatggagaatgttgaaagccttcaggctgcaagagaaagaatgatccattcggttgacagagaaaggggaaatggtaaag |
38061210 |
T |
|
| Q |
214 |
aaattgaaaaagatgttctaaattggttggagaaagtgaacgaggtcattgaaaatgcaaatcggcttcaaaacgatcctcgtcgtcccaatgttaggtg |
313 |
Q |
| |
|
|||||||||| |||||| | |||||||| ||||||||||||| |||||||||||| |||||| ||||||||||||||||||||||| ||||||| ||||| |
|
|
| T |
38061209 |
aaattgaaaaggatgttttgaattggttagagaaagtgaacggggtcattgaaaaggcaaatgggcttcaaaacgatcctcgtcgtgccaatgtaaggtg |
38061110 |
T |
|
| Q |
314 |
ctcagcatggtcattccccaacttgattttacgtcatcaactaagtaggaaagctacaaaaatt |
377 |
Q |
| |
|
|||||||||| | ||||||||||||||||||||||||||||| |||||||||| | ||||||| |
|
|
| T |
38061109 |
ctcagcatggccgttccccaacttgattttacgtcatcaacttggtaggaaagccagaaaaatt |
38061046 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0068 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: scaffold0068
Description:
Target: scaffold0068; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 14 - 378
Target Start/End: Complemental strand, 44812 - 44448
Alignment:
| Q |
14 |
gaaacgaaaatcaatggatattttaatttctgttgttgcaaaaatagcagaatataccgttgtgcctattggacgtcaagcaagttacttgatattctac |
113 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
44812 |
gaaacgaaaatcaatggaaattttaatttctgttgttgcaaaaatagcagaatataccgttgtgcctattggacgtcaagcaagttacttgatattctac |
44713 |
T |
|
| Q |
114 |
aaaggcaacttcaagaagttaaaggatcaagttgaagaccttcaggctgcaagagaaagcctgctccattcggttgaaagagaaaggggaaatggtagag |
213 |
Q |
| |
|
||||| || || ||| ||||||||||| |||||||||||| | ||||||||||| || |||||||||| |||||||||||||||||||||| || |
|
|
| T |
44712 |
aaaggtaattttaaggtattaaaggatcatgttgaagaccttgaagctgcaagagatgtaatgatccattcggtggaaagagaaaggggaaatggtaaag |
44613 |
T |
|
| Q |
214 |
aaattgaaaaagatgttctaaattggttggagaaagtgaacgaggtcattgaaaatgcaaatcggcttcaaaacgatcctcgtcgtcccaatgttaggtg |
313 |
Q |
| |
|
||||||||||| ||||| | ||||||||||||||||||||||||||||||||||| || ||| | |||||||| || ||||| ||| |||||||||||| |
|
|
| T |
44612 |
aaattgaaaaaaatgttttgaattggttggagaaagtgaacgaggtcattgaaaaggcgaattgccttcaaaatgaccctcgccgtttcaatgttaggtg |
44513 |
T |
|
| Q |
314 |
ctcagcatggtcattccccaacttgattttacgtcatcaactaagtaggaaagctacaaaaattg |
378 |
Q |
| |
|
|||||||| ||| |||||||||||| |||||||||||||| ||||||||||||| |||||||||| |
|
|
| T |
44512 |
ctcagcatcgtcgttccccaacttggttttacgtcatcaattaagtaggaaagccacaaaaattg |
44448 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1480 (Bit Score: 198; Significance: 1e-108; HSPs: 1)
Name: scaffold1480
Description:
Target: scaffold1480; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 14 - 259
Target Start/End: Original strand, 1503 - 1748
Alignment:
| Q |
14 |
gaaacgaaaatcaatggatattttaatttctgttgttgcaaaaatagcagaatataccgttgtgcctattggacgtcaagcaagttacttgatattctac |
113 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1503 |
gaaacgaaaatcaatggaaattttaatttctgttgttgcaaaaatagcagaatataccgttgtgcctattggacgtcaagcaagttacttgatattctac |
1602 |
T |
|
| Q |
114 |
aaaggcaacttcaagaagttaaaggatcaagttgaagaccttcaggctgcaagagaaagcctgctccattcggttgaaagagaaaggggaaatggtagag |
213 |
Q |
| |
|
||||| |||||||||| |||||||||||| |||||||||||| |||||||||||| ||| || ||||||||||||||||||||||||||||||| | || |
|
|
| T |
1603 |
aaaggtaacttcaagacgttaaaggatcatgttgaagaccttgaggctgcaagagcaagaatgatccattcggttgaaagagaaaggggaaatggcaaag |
1702 |
T |
|
| Q |
214 |
aaattgaaaaagatgttctaaattggttggagaaagtgaacgaggt |
259 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
1703 |
aaattgaaaaagatgttctgaattggttggagaaagtgaacgaggt |
1748 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0406 (Bit Score: 189; Significance: 1e-102; HSPs: 1)
Name: scaffold0406
Description:
Target: scaffold0406; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 14 - 378
Target Start/End: Complemental strand, 11875 - 11511
Alignment:
| Q |
14 |
gaaacgaaaatcaatggatattttaatttctgttgttgcaaaaatagcagaatataccgttgtgcctattggacgtcaagcaagttacttgatattctac |
113 |
Q |
| |
|
|||| ||||||||||||| ||||||| |||| |||||| ||||||| ||||||| || |||||||| |||||||| |||||||||||||||||||||||| |
|
|
| T |
11875 |
gaaaagaaaatcaatggaaattttaacttctattgttgaaaaaataacagaatacacggttgtgccaattggacgccaagcaagttacttgatattctac |
11776 |
T |
|
| Q |
114 |
aaaggcaacttcaagaagttaaaggatcaagttgaagaccttcaggctgcaagagaaagcctgctccattcggttgaaagagaaaggggaaatggtagag |
213 |
Q |
| |
|
||||| |||||||||| |||||||||||| |||||||||||| | ||||||||||| || | |||| ||||||| |||| | |||||||| | |
|
|
| T |
11775 |
aaaggtaacttcaagacgttaaaggatcatgttgaagaccttgaagctgcaagagatagaataaaccatgaccttgaaagtgaaatgcaaaatggtaaat |
11676 |
T |
|
| Q |
214 |
aaattgaaaaagatgttctaaattggttggagaaagtgaacgaggtcattgaaaatgcaaatcggcttcaaaacgatcctcgtcgtcccaatgttaggtg |
313 |
Q |
| |
|
|||||||||||||||| | ||||||||||| ||||||||||||||||||||||| | ||| ||||||||||||||||||| ||| ||||||||||||| |
|
|
| T |
11675 |
taattgaaaaagatgttatgaattggttggataaagtgaacgaggtcattgaaaaggtgaatgggcttcaaaacgatcctcgccgtgccaatgttaggtg |
11576 |
T |
|
| Q |
314 |
ctcagcatggtcattccccaacttgattttacgtcatcaactaagtaggaaagctacaaaaattg |
378 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||| ||||||||||| |||||||||| |
|
|
| T |
11575 |
ctcagcatggtcgttccccaacttgattttacgtcatcaacttagtaggaaagccacaaaaattg |
11511 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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