View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19175_high_71 (Length: 352)

Name: NF19175_high_71
Description: NF19175
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19175_high_71
NF19175_high_71
[»] chr6 (34 HSPs)
chr6 (192-338)||(27097556-27097702)
chr6 (202-335)||(8102766-8102899)
chr6 (204-320)||(28981219-28981335)
chr6 (204-335)||(30493574-30493705)
chr6 (202-335)||(1933609-1933742)
chr6 (204-335)||(26588389-26588520)
chr6 (205-335)||(31296863-31296993)
chr6 (251-335)||(32327134-32327218)
chr6 (249-335)||(127756-127842)
chr6 (214-335)||(30776715-30776836)
chr6 (247-335)||(1523493-1523581)
chr6 (247-335)||(32191647-32191735)
chr6 (204-335)||(14801869-14802000)
chr6 (247-334)||(29255364-29255451)
chr6 (213-335)||(31852110-31852232)
chr6 (214-323)||(679161-679270)
chr6 (202-334)||(4010430-4010561)
chr6 (247-335)||(34185610-34185698)
chr6 (247-335)||(546116-546204)
chr6 (251-335)||(606293-606377)
chr6 (251-335)||(3913491-3913575)
chr6 (251-335)||(12170557-12170641)
chr6 (292-335)||(9380153-9380196)
chr6 (251-324)||(29319806-29319879)
chr6 (213-335)||(29743044-29743170)
chr6 (252-337)||(34018650-34018735)
chr6 (255-335)||(67918-67998)
chr6 (251-335)||(7515119-7515203)
chr6 (247-335)||(23128703-23128791)
chr6 (251-339)||(30608428-30608516)
chr6 (293-335)||(14846138-14846180)
chr6 (247-320)||(3355202-3355275)
chr6 (299-335)||(528267-528303)
chr6 (251-335)||(33053085-33053169)
[»] chr5 (26 HSPs)
chr5 (210-335)||(8088129-8088254)
chr5 (192-335)||(39567297-39567441)
chr5 (204-335)||(14211267-14211398)
chr5 (247-331)||(26878029-26878113)
chr5 (204-335)||(19103384-19103515)
chr5 (204-335)||(28540823-28540954)
chr5 (205-335)||(35920913-35921043)
chr5 (247-340)||(10722844-10722937)
chr5 (271-324)||(1409605-1409658)
chr5 (251-335)||(9113642-9113726)
chr5 (251-335)||(13007316-13007400)
chr5 (251-335)||(34945480-34945564)
chr5 (251-335)||(38597884-38597968)
chr5 (247-334)||(6216981-6217068)
chr5 (247-333)||(2979225-2979311)
chr5 (251-335)||(24229701-24229785)
chr5 (251-335)||(38007445-38007529)
chr5 (247-335)||(41630585-41630673)
chr5 (202-335)||(10332464-10332598)
chr5 (293-335)||(14726378-14726420)
chr5 (283-324)||(19121031-19121072)
chr5 (299-335)||(8096415-8096451)
chr5 (251-335)||(11976852-11976936)
chr5 (247-335)||(15571569-15571657)
chr5 (204-260)||(16758580-16758636)
chr5 (251-335)||(31391670-31391754)
[»] chr1 (40 HSPs)
chr1 (204-335)||(47132947-47133078)
chr1 (210-335)||(24583000-24583125)
chr1 (210-335)||(44543322-44543447)
chr1 (245-335)||(3228354-3228444)
chr1 (233-335)||(32679058-32679160)
chr1 (210-324)||(41994477-41994591)
chr1 (204-335)||(48750229-48750360)
chr1 (247-335)||(10776378-10776466)
chr1 (251-335)||(21947535-21947619)
chr1 (205-335)||(13144729-13144859)
chr1 (213-339)||(6217736-6217866)
chr1 (247-336)||(31317823-31317912)
chr1 (210-335)||(49626963-49627088)
chr1 (251-335)||(14872730-14872814)
chr1 (247-323)||(27580057-27580133)
chr1 (247-335)||(31984248-31984336)
chr1 (251-335)||(35484308-35484392)
chr1 (256-335)||(4413210-4413289)
chr1 (204-335)||(36775627-36775758)
chr1 (252-335)||(37720066-37720149)
chr1 (202-324)||(43412416-43412538)
chr1 (286-339)||(15492413-15492466)
chr1 (210-335)||(19060959-19061084)
chr1 (251-340)||(32395089-32395178)
chr1 (210-335)||(44915689-44915814)
chr1 (251-335)||(7337580-7337664)
chr1 (232-320)||(25564070-25564158)
chr1 (251-335)||(45415649-45415733)
chr1 (271-334)||(13075573-13075636)
chr1 (204-323)||(16262905-16263024)
chr1 (289-335)||(24583275-24583321)
chr1 (214-335)||(18939373-18939494)
chr1 (251-339)||(49504508-49504596)
chr1 (292-335)||(14489404-14489447)
chr1 (300-335)||(16161968-16162003)
chr1 (292-335)||(34413009-34413052)
chr1 (286-335)||(9341852-9341901)
chr1 (210-335)||(31692384-31692509)
chr1 (251-335)||(5983927-5984011)
chr1 (291-335)||(51373775-51373819)
[»] scaffold0009 (1 HSPs)
scaffold0009 (202-335)||(58005-58138)
[»] chr4 (42 HSPs)
chr4 (210-334)||(36161778-36161902)
chr4 (204-335)||(52944372-52944503)
chr4 (204-335)||(6155140-6155274)
chr4 (205-339)||(2069493-2069627)
chr4 (251-340)||(21686154-21686243)
chr4 (204-335)||(51888128-51888259)
chr4 (211-325)||(22300917-22301031)
chr4 (248-334)||(54021965-54022051)
chr4 (232-335)||(47320329-47320432)
chr4 (214-335)||(33332486-33332607)
chr4 (251-335)||(2520887-2520971)
chr4 (247-335)||(9048768-9048856)
chr4 (247-335)||(10258813-10258901)
chr4 (251-335)||(19853429-19853513)
chr4 (204-335)||(31891204-31891335)
chr4 (202-336)||(38166146-38166279)
chr4 (247-324)||(36204307-36204384)
chr4 (251-335)||(22611291-22611375)
chr4 (251-335)||(24098984-24099068)
chr4 (271-335)||(29960866-29960930)
chr4 (247-335)||(45418616-45418704)
chr4 (251-335)||(53811136-53811220)
chr4 (205-335)||(52933866-52933990)
chr4 (247-333)||(32766618-32766704)
chr4 (232-337)||(9145806-9145910)
chr4 (251-335)||(4142669-4142753)
chr4 (251-335)||(10496443-10496527)
chr4 (251-339)||(26633584-26633672)
chr4 (256-335)||(29120296-29120375)
chr4 (204-335)||(36194770-36194900)
chr4 (247-335)||(18935886-18935974)
chr4 (291-335)||(37465630-37465674)
chr4 (204-335)||(22038719-22038850)
chr4 (204-335)||(48351103-48351234)
chr4 (247-333)||(33921158-33921244)
chr4 (249-335)||(55228084-55228170)
chr4 (255-324)||(13634227-13634296)
chr4 (247-324)||(21662541-21662618)
chr4 (247-324)||(21671305-21671382)
chr4 (282-335)||(22305538-22305591)
chr4 (299-335)||(9714066-9714102)
chr4 (251-335)||(56040563-56040647)
[»] chr2 (47 HSPs)
chr2 (210-335)||(17249065-17249190)
chr2 (202-335)||(29574546-29574679)
chr2 (204-335)||(10929716-10929847)
chr2 (210-335)||(32448534-32448662)
chr2 (214-335)||(19595821-19595942)
chr2 (204-335)||(10237134-10237265)
chr2 (204-335)||(24461494-24461625)
chr2 (202-335)||(14423374-14423507)
chr2 (251-335)||(1421774-1421858)
chr2 (251-335)||(31210525-31210609)
chr2 (251-335)||(36691972-36692056)
chr2 (210-335)||(12647030-12647152)
chr2 (204-335)||(23933537-23933668)
chr2 (204-335)||(28533872-28534003)
chr2 (204-336)||(14955580-14955712)
chr2 (247-335)||(17994648-17994736)
chr2 (247-335)||(25508986-25509074)
chr2 (251-335)||(31788554-31788638)
chr2 (247-335)||(37994378-37994466)
chr2 (237-323)||(32092247-32092333)
chr2 (210-339)||(6436664-6436793)
chr2 (210-335)||(37416767-37416892)
chr2 (247-335)||(3309039-3309127)
chr2 (251-335)||(4778851-4778935)
chr2 (251-335)||(7677791-7677875)
chr2 (247-335)||(19028832-19028920)
chr2 (247-335)||(29279488-29279576)
chr2 (214-335)||(30399947-30400074)
chr2 (247-335)||(31128698-31128786)
chr2 (251-335)||(33585653-33585737)
chr2 (256-335)||(7646581-7646660)
chr2 (204-335)||(12554099-12554230)
chr2 (204-335)||(33760111-33760242)
chr2 (251-333)||(36943041-36943123)
chr2 (247-324)||(19062281-19062358)
chr2 (251-335)||(4041512-4041596)
chr2 (247-323)||(29173650-29173726)
chr2 (271-335)||(37876524-37876588)
chr2 (251-335)||(38445264-38445348)
chr2 (247-335)||(41694715-41694803)
chr2 (247-322)||(8809374-8809449)
chr2 (252-335)||(9169176-9169259)
chr2 (253-335)||(4904063-4904145)
chr2 (204-261)||(17151474-17151531)
chr2 (247-324)||(39285204-39285281)
chr2 (251-339)||(1415655-1415743)
chr2 (292-324)||(6358810-6358842)
[»] chr3 (58 HSPs)
chr3 (204-335)||(50194252-50194383)
chr3 (210-335)||(53807775-53807900)
chr3 (204-335)||(35175444-35175575)
chr3 (210-335)||(628840-628965)
chr3 (210-335)||(29922103-29922228)
chr3 (210-335)||(29971256-29971381)
chr3 (251-335)||(45568362-45568446)
chr3 (204-335)||(51923767-51923898)
chr3 (204-335)||(53508266-53508397)
chr3 (205-323)||(14859531-14859649)
chr3 (247-335)||(21313119-21313207)
chr3 (247-335)||(23799827-23799915)
chr3 (248-336)||(38142609-38142697)
chr3 (247-335)||(42460832-42460920)
chr3 (204-335)||(7546655-7546786)
chr3 (204-335)||(16235466-16235597)
chr3 (214-335)||(51303560-51303681)
chr3 (251-335)||(10229563-10229647)
chr3 (247-335)||(26275736-26275824)
chr3 (251-335)||(40487412-40487496)
chr3 (251-335)||(40556789-40556873)
chr3 (251-335)||(43488507-43488591)
chr3 (247-335)||(44805113-44805200)
chr3 (251-339)||(52923030-52923118)
chr3 (204-335)||(8914752-8914883)
chr3 (251-335)||(38860029-38860115)
chr3 (247-334)||(45424881-45424968)
chr3 (287-335)||(9173871-9173919)
chr3 (251-335)||(9797451-9797535)
chr3 (251-335)||(10233157-10233241)
chr3 (291-335)||(27856292-27856336)
chr3 (251-335)||(38545886-38545970)
chr3 (299-339)||(46220798-46220838)
chr3 (283-335)||(51487214-51487266)
chr3 (204-335)||(4821847-4821977)
chr3 (204-335)||(21289731-21289862)
chr3 (247-334)||(45425675-45425762)
chr3 (204-306)||(29239383-29239485)
chr3 (251-333)||(54149078-54149160)
chr3 (251-340)||(7448826-7448915)
chr3 (251-340)||(7456968-7457057)
chr3 (286-335)||(7792104-7792153)
chr3 (251-335)||(12050565-12050649)
chr3 (204-280)||(12947246-12947322)
chr3 (255-335)||(21431704-21431784)
chr3 (251-335)||(21533726-21533810)
chr3 (291-331)||(32246550-32246590)
chr3 (251-335)||(36461348-36461432)
chr3 (251-335)||(48650651-48650735)
chr3 (204-335)||(27706143-27706274)
chr3 (248-335)||(48199861-48199948)
chr3 (293-335)||(19619842-19619884)
chr3 (293-335)||(33580009-33580051)
chr3 (251-332)||(46304440-46304521)
chr3 (287-335)||(12946884-12946932)
chr3 (247-275)||(35864909-35864937)
chr3 (247-335)||(41818298-41818386)
chr3 (247-335)||(52115938-52116026)
[»] chr8 (45 HSPs)
chr8 (210-335)||(15344357-15344482)
chr8 (210-335)||(15433422-15433547)
chr8 (210-335)||(15524726-15524851)
chr8 (204-335)||(29617189-29617320)
chr8 (247-324)||(7198121-7198198)
chr8 (204-335)||(471081-471212)
chr8 (204-335)||(18890614-18890745)
chr8 (204-335)||(39657497-39657628)
chr8 (204-335)||(14916103-14916233)
chr8 (210-335)||(1236612-1236737)
chr8 (210-335)||(1239312-1239437)
chr8 (250-331)||(24099169-24099250)
chr8 (251-335)||(20553156-20553240)
chr8 (251-335)||(37971373-37971457)
chr8 (204-335)||(42046264-42046395)
chr8 (204-336)||(5046796-5046928)
chr8 (251-335)||(20559659-20559743)
chr8 (251-335)||(20571221-20571305)
chr8 (247-335)||(34609922-34610010)
chr8 (247-335)||(43833911-43833999)
chr8 (251-335)||(45445726-45445810)
chr8 (247-335)||(28086727-28086816)
chr8 (214-335)||(33347436-33347557)
chr8 (251-335)||(7677198-7677282)
chr8 (291-335)||(8867935-8867979)
chr8 (251-335)||(16928672-16928756)
chr8 (251-335)||(17693529-17693613)
chr8 (283-335)||(18846381-18846433)
chr8 (247-335)||(24186576-24186664)
chr8 (204-335)||(5333472-5333603)
chr8 (204-335)||(14585720-14585851)
chr8 (204-335)||(41896560-41896691)
chr8 (216-334)||(8443427-8443545)
chr8 (246-335)||(9637324-9637413)
chr8 (214-335)||(26469061-26469182)
chr8 (247-336)||(27110379-27110468)
chr8 (251-335)||(7883156-7883240)
chr8 (251-335)||(23230733-23230817)
chr8 (247-335)||(27498281-27498368)
chr8 (251-335)||(29939390-29939474)
chr8 (247-335)||(31013523-31013611)
chr8 (278-337)||(41684499-41684558)
chr8 (204-317)||(21237833-21237946)
chr8 (251-335)||(10377779-10377863)
chr8 (287-335)||(34493128-34493176)
[»] chr7 (40 HSPs)
chr7 (204-336)||(24069310-24069442)
chr7 (204-324)||(41553362-41553482)
chr7 (204-335)||(35132990-35133121)
chr7 (247-324)||(5078342-5078419)
chr7 (251-335)||(9450054-9450138)
chr7 (192-335)||(22742974-22743118)
chr7 (204-335)||(35665052-35665183)
chr7 (202-335)||(11343851-11343983)
chr7 (248-340)||(3267129-3267221)
chr7 (251-335)||(8001463-8001547)
chr7 (251-335)||(12141225-12141309)
chr7 (251-335)||(39171507-39171591)
chr7 (247-335)||(46700121-46700209)
chr7 (204-339)||(5348505-5348640)
chr7 (205-335)||(4999946-5000076)
chr7 (254-335)||(28044673-28044754)
chr7 (299-339)||(3398328-3398368)
chr7 (247-335)||(19404674-19404762)
chr7 (247-335)||(25287103-25287191)
chr7 (251-335)||(38798871-38798955)
chr7 (251-335)||(47590401-47590485)
chr7 (251-335)||(48316729-48316813)
chr7 (204-335)||(28476270-28476400)
chr7 (250-296)||(21609557-21609603)
chr7 (286-335)||(48061547-48061596)
chr7 (251-335)||(13796846-13796930)
chr7 (251-335)||(19296960-19297044)
chr7 (251-335)||(30756736-30756820)
chr7 (251-335)||(34899524-34899608)
chr7 (251-335)||(45349716-45349800)
chr7 (204-318)||(38880512-38880626)
chr7 (249-335)||(48930795-48930881)
chr7 (247-320)||(969391-969464)
chr7 (210-315)||(1769115-1769220)
chr7 (204-321)||(3224342-3224458)
chr7 (247-324)||(24350767-24350844)
chr7 (204-281)||(41553750-41553827)
chr7 (248-332)||(5792883-5792967)
chr7 (251-335)||(37837375-37837459)
chr7 (251-335)||(42978700-42978784)
[»] scaffold0127 (1 HSPs)
scaffold0127 (251-335)||(15580-15664)
[»] scaffold0042 (1 HSPs)
scaffold0042 (204-335)||(92413-92544)
[»] scaffold0884 (1 HSPs)
scaffold0884 (251-335)||(1890-1974)
[»] scaffold0017 (1 HSPs)
scaffold0017 (251-335)||(32664-32748)
[»] scaffold0039 (1 HSPs)
scaffold0039 (204-335)||(93148-93279)
[»] scaffold0347 (1 HSPs)
scaffold0347 (247-335)||(6114-6202)
[»] scaffold0088 (1 HSPs)
scaffold0088 (251-335)||(50864-50948)
[»] scaffold0888 (1 HSPs)
scaffold0888 (283-336)||(1594-1647)
[»] scaffold0021 (1 HSPs)
scaffold0021 (271-335)||(4280-4344)
[»] scaffold0015 (1 HSPs)
scaffold0015 (233-335)||(3958-4059)
[»] scaffold0262 (1 HSPs)
scaffold0262 (247-339)||(1732-1824)
[»] scaffold0154 (1 HSPs)
scaffold0154 (248-324)||(25375-25451)
[»] scaffold0128 (1 HSPs)
scaffold0128 (247-335)||(36909-36997)
[»] scaffold0121 (1 HSPs)
scaffold0121 (271-335)||(31191-31255)
[»] scaffold0049 (1 HSPs)
scaffold0049 (247-335)||(71217-71305)
[»] scaffold0445 (1 HSPs)
scaffold0445 (293-335)||(1474-1516)
[»] scaffold0219 (1 HSPs)
scaffold0219 (267-335)||(14788-14855)
[»] scaffold0136 (1 HSPs)
scaffold0136 (283-335)||(38176-38228)


Alignment Details
Target: chr6 (Bit Score: 123; Significance: 4e-63; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 192 - 338
Target Start/End: Complemental strand, 27097702 - 27097556
Alignment:
Q  192 ttgtgcgacgttgtttgattcatattgaaagatcagttttagtcaatcatagttacaatcaatgatttggacgttaacattgcaaatccgaaaacatgaa 291  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||| | ||||||||||||||||||| ||||||||||||||||||||||| |    
T  27097702 ttgtgcgacgttgtttgattcatattgaaagattagttttagtcaatcatagattcaatcaatgatttggacgtcaacattgcaaatccgaaaacatgga 27097603  T
Q  292 tattttggtgatttagattttatcatattatttctaggcattttacc 338  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||    
T  27097602 tattttggtgatttagattttatcatattatctctaggcattttacc 27097556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 202 - 335
Target Start/End: Original strand, 8102766 - 8102899
Alignment:
Q  202 ttgtttgattcatattgaaagatcagttttagtcaatcatagttacaatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtg 301  Q
    ||||||| ||| |||||||||||||| || || |||||| |  | || |||||||||||| ||| ||| ||||| ||||  ||||||||||||| || ||    
T  8102766 ttgtttggttcgtattgaaagatcagcttcagacaatcacaaattcattcaatgatttgggcgtcaacgttgcagatccagaaacatgaatattctgatg 8102865  T
Q  302 atttagattttatcatattatttctaggcatttt 335  Q
    ||||||||||||||||||||||| ||||||||||    
T  8102866 atttagattttatcatattatttgtaggcatttt 8102899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 204 - 320
Target Start/End: Original strand, 28981219 - 28981335
Alignment:
Q  204 gtttgattcatattgaaagatcagttttagtcaatcatagttacaatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgat 303  Q
    ||||| |||||||| |||||| ||||||||||||||| || | ||||||||||| | ||||| ||||||||| ||||||||  |||  ||||||||| ||    
T  28981219 gtttggttcatattcaaagattagttttagtcaatcacagattcaatcaatgatcttgacgtcaacattgcagatccgaaagtatgggtattttggtcat 28981318  T
Q  304 ttagattttatcatatt 320  Q
    |||||||||||||||||    
T  28981319 ttagattttatcatatt 28981335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 204 - 335
Target Start/End: Original strand, 30493574 - 30493705
Alignment:
Q  204 gtttgattcatattgaaagatcagttttagtcaatcatagttacaatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgat 303  Q
    ||||| |||||||||||||||||  || ||||||||  |  | ||||||||||||||||||| ||| ||||||||||| || ||||  ||||||||||||    
T  30493574 gtttggttcatattgaaagatcaacttcagtcaatctcatattcaatcaatgatttggacgtcaacgttgcaaatccggaagcatgggtattttggtgat 30493673  T
Q  304 ttagattttatcatattatttctaggcatttt 335  Q
    ||| |||||||||| || ||| ||||||||||    
T  30493674 ttatattttatcatgttgtttgtaggcatttt 30493705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 202 - 335
Target Start/End: Complemental strand, 1933742 - 1933609
Alignment:
Q  202 ttgtttgattcatattgaaagatcagttttagtcaatcatagttacaatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtg 301  Q
    ||||||| |||||||  ||||||||  || | ||||||| || | ||||||||||||||||||| ||| ||||| ||||| |||||||| |||| |||||    
T  1933742 ttgtttggttcatatcaaaagatcaacttcaatcaatcacagattcaatcaatgatttggacgtcaacgttgcagatccggaaacatgattattctggtg 1933643  T
Q  302 atttagattttatcatattatttctaggcatttt 335  Q
    ||||| ||||||||||||||| | || |||||||    
T  1933642 atttatattttatcatattatctatatgcatttt 1933609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 204 - 335
Target Start/End: Complemental strand, 26588520 - 26588389
Alignment:
Q  204 gtttgattcatattgaaagatcagttttagtcaatcatagttacaatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgat 303  Q
    ||||| |||||||||||||||||  || ||||||||| |  | |||| ||||||||||| || ||| ||||||||||  || ||||| ||||| ||||||    
T  26588520 gtttggttcatattgaaagatcaacttcagtcaatcacacattcaattaatgatttggatgtcaacgttgcaaatccagaagcatgagtatttgggtgat 26588421  T
Q  304 ttagattttatcatattatttctaggcatttt 335  Q
    || |||||||||||||||||| ||| ||||||    
T  26588420 tttgattttatcatattatttttagacatttt 26588389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 205 - 335
Target Start/End: Original strand, 31296863 - 31296993
Alignment:
Q  205 tttgattcatattgaaagatcagttttagtcaatcatagttacaatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatt 304  Q
    ||||||||||||||||| |||||||| ||||||||  |  | ||||  ||||||| ||||| ||| ||||| ||||| || ||||| |||| ||||||||    
T  31296863 tttgattcatattgaaaaatcagtttcagtcaatccaatattcaattgatgatttagacgtcaacgttgcagatccggaagcatgagtattctggtgatt 31296962  T
Q  305 tagattttatcatattatttctaggcatttt 335  Q
    || ||||||||||||| ||| ||||||||||    
T  31296963 tatattttatcatattgtttgtaggcatttt 31296993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 251 - 335
Target Start/End: Complemental strand, 32327218 - 32327134
Alignment:
Q  251 caatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    ||||||||| ||||||||| ||||| ||||| || ||||| || ||||||||||||| |||||||||||||||| ||||||||||    
T  32327218 caatgattttgacgttaacgttgcagatccggaagcatgagtagtttggtgatttaggttttatcatattatttgtaggcatttt 32327134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 249 - 335
Target Start/End: Original strand, 127756 - 127842
Alignment:
Q  249 atcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    ||||||||||||| ||| ||| ||||| || || || ||||| ||||| ||||||||||||||||||||||||||| ||||||||||    
T  127756 atcaatgatttgggcgtcaacgttgcagattcggaagcatgagtatttcggtgatttagattttatcatattatttgtaggcatttt 127842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 214 - 335
Target Start/End: Original strand, 30776715 - 30776836
Alignment:
Q  214 tattgaaagatcagttttagtcaatcatagttacaatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagatttta 313  Q
    |||||||||||||| || || |||||| |  | || |||||||||||| ||| ||| |||||||||   || ||||  |||| |||||||||||||||||    
T  30776715 tattgaaagatcagcttcagacaatcacaaattcattcaatgatttgggcgtgaacgttgcaaatctagaagcatgggtattctggtgatttagatttta 30776814  T
Q  314 tcatattatttctaggcatttt 335  Q
    ||||||||||| ||||||||||    
T  30776815 tcatattatttgtaggcatttt 30776836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 247 - 335
Target Start/End: Original strand, 1523493 - 1523581
Alignment:
Q  247 caatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    |||||||||||||| |||| ||| ||||| ||||  || ||||  |||| |||||||||||||||||||||||||||| ||||||||||    
T  1523493 caatcaatgatttgaacgtcaacgttgcagatccagaagcatgggtattctggtgatttagattttatcatattatttgtaggcatttt 1523581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 247 - 335
Target Start/End: Complemental strand, 32191735 - 32191647
Alignment:
Q  247 caatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    ||||||||||||||||||  ||| ||||| |||||||| |||||  ||| ||||||||||||||||||||||  |||| ||||||||||    
T  32191735 caatcaatgatttggacgccaacgttgcatatccgaaagcatgagcattctggtgatttagattttatcatacaatttgtaggcatttt 32191647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 204 - 335
Target Start/End: Original strand, 14801869 - 14802000
Alignment:
Q  204 gtttgattcatattgaaagatcagttttagtcaatcatagttacaatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgat 303  Q
    ||||| ||| ||||||||||| || || || |||||| |  | ||||||||||||||| ||| ||| ||||| ||||  ||  |||  ||||||||||||    
T  14801869 gtttggttcgtattgaaagattagcttcagacaatcacaaattcaatcaatgatttgggcgtcaacgttgcagatccagaagaatgtgtattttggtgat 14801968  T
Q  304 ttagattttatcatattatttctaggcatttt 335  Q
    |||||||| |||||||||||| ||||||||||    
T  14801969 ttagatttcatcatattatttgtaggcatttt 14802000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 247 - 334
Target Start/End: Complemental strand, 29255451 - 29255364
Alignment:
Q  247 caatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcattt 334  Q
    ||||||||||||||| ||| ||| || || ||||| |||||||  ||||| ||||| ||||||||||||||||||||| |||||||||    
T  29255451 caatcaatgatttgggcgtcaacgttacagatccggaaacatgggtatttcggtgacttagattttatcatattatttgtaggcattt 29255364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 213 - 335
Target Start/End: Complemental strand, 31852232 - 31852110
Alignment:
Q  213 atattgaaagatcagttttagtcaatcatagttacaatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagatttt 312  Q
    ||||||||||||||  || |||||| || || |  ||||||||||||| |||| ||  ||||| ||||| || ||||| |||| |||||||||| |||||    
T  31852232 atattgaaagatcaacttcagtcaaccacagattaaatcaatgatttgaacgtcaaagttgcagatccggaagcatgagtattctggtgatttaaatttt 31852133  T
Q  313 atcatattatttctaggcatttt 335  Q
    |||||||||||| ||| ||||||    
T  31852132 atcatattatttatagacatttt 31852110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 214 - 323
Target Start/End: Original strand, 679161 - 679270
Alignment:
Q  214 tattgaaagatcagttttagtcaatcatagttacaatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagatttta 313  Q
    ||||||||| ||||||| ||||||||| |  | ||||||||||||||  ||  ||| ||||||||| | || |||||||||| ||  |||||||||||||    
T  679161 tattgaaaggtcagtttcagtcaatcacatattcaatcaatgatttgagcgccaactttgcaaatctggaagcatgaatattctgacgatttagatttta 679260  T
Q  314 tcatattatt 323  Q
    ||||||||||    
T  679261 tcatattatt 679270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 202 - 334
Target Start/End: Complemental strand, 4010561 - 4010430
Alignment:
Q  202 ttgtttgattcatattgaaagatcagttttagtcaatcatagttacaatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtg 301  Q
    ||||||||||| ||||||||||||| | | | ||||| | |  | |||||||||||||||  ||| || ||||| ||||| || ||||| ||||| ||||    
T  4010561 ttgtttgattcctattgaaagatca-tatcaatcaattacatattcaatcaatgatttgggtgttgacgttgcagatccggaagcatgagtatttcggtg 4010463  T
Q  302 atttagattttatcatattatttctaggcattt 334  Q
    | ||||| ||||||||||||||| |||||||||    
T  4010462 acttagaatttatcatattatttataggcattt 4010430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 247 - 335
Target Start/End: Complemental strand, 34185698 - 34185610
Alignment:
Q  247 caatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    ||||||||||||||||||| ||| ||||||| |   || ||||  |||| |||||||||||||||||||||||||||| |||| |||||    
T  34185698 caatcaatgatttggacgtcaactttgcaaaactagaatcatgggtattctggtgatttagattttatcatattatttgtaggtatttt 34185610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 247 - 335
Target Start/End: Original strand, 546116 - 546204
Alignment:
Q  247 caatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    ||||||||||||||| ||| ||| ||||| ||||  || ||||  |||| ||||| ||||||||| |||||||||||| ||||||||||    
T  546116 caatcaatgatttgggcgtcaacgttgcagatccagaagcatgggtattctggtggtttagatttcatcatattatttgtaggcatttt 546204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 251 - 335
Target Start/End: Original strand, 606293 - 606377
Alignment:
Q  251 caatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    ||||||||||||| | ||| ||||| ||||| |||||||  ||||| ||||| |||  |||||||||||||||| ||||||||||    
T  606293 caatgatttggacatcaacgttgcagatccggaaacatgggtatttcggtgacttaagttttatcatattatttgtaggcatttt 606377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 251 - 335
Target Start/End: Complemental strand, 3913575 - 3913491
Alignment:
Q  251 caatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    ||||||||| ||||| ||| ||||| ||||  || ||||  ||||| |||||||||| |||||||||||||||| ||||||||||    
T  3913575 caatgatttagacgtcaacgttgcagatccagaagcatgggtatttcggtgatttaggttttatcatattatttgtaggcatttt 3913491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 251 - 335
Target Start/End: Original strand, 12170557 - 12170641
Alignment:
Q  251 caatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    |||||||||||| || ||| ||||| ||||| || ||||  ||||| |||||||||| ||| |||||||||||| ||||||||||    
T  12170557 caatgatttggatgtcaacgttgcagatccggaagcatgggtatttcggtgatttaggtttgatcatattatttgtaggcatttt 12170641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 292 - 335
Target Start/End: Original strand, 9380153 - 9380196
Alignment:
Q  292 tattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    ||||||||||||||||||||||||||||||||| || |||||||    
T  9380153 tattttggtgatttagattttatcatattatttgtatgcatttt 9380196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 251 - 324
Target Start/End: Complemental strand, 29319879 - 29319806
Alignment:
Q  251 caatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattattt 324  Q
    |||||||||| |||| ||| ||||||||||| || ||||  ||||||||||| |||  ||||||||||||||||    
T  29319879 caatgatttgaacgtcaacgttgcaaatccggaagcatgtgtattttggtgacttaagttttatcatattattt 29319806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 213 - 335
Target Start/End: Original strand, 29743044 - 29743170
Alignment:
Q  213 atattgaaagatcagttttagtcaatca----tagttacaatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttaga 308  Q
    ||||||||||||||  |||||| |||||    ||| | ||||||||||  ||| ||| ||| ||||| ||||| || |  || |||| ||||||||||||    
T  29743044 atattgaaagatcaactttagttaatcaattgtagattcaatcaatgacgtgggcgtcaacgttgcagatccggaagctagagtattctggtgatttaga 29743143  T
Q  309 ttttatcatattatttctaggcatttt 335  Q
    | |||||||||||||| ||||||||||    
T  29743144 tcttatcatattatttataggcatttt 29743170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 252 - 337
Target Start/End: Original strand, 34018650 - 34018735
Alignment:
Q  252 aatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcattttac 337  Q
    |||||||||| ||| ||| ||||| ||||| || ||||| |||||  |||| |||  |||||||||||||||| ||||||||||||    
T  34018650 aatgatttgggcgtcaacgttgcagatccggaagcatgagtatttcagtgacttatgttttatcatattatttgtaggcattttac 34018735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 335
Target Start/End: Complemental strand, 67998 - 67918
Alignment:
Q  255 gatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    |||||| |||||||| ||||| ||||| |||||||  ||||| || || |||  |||||||||||||||| ||||||||||    
T  67998 gatttgtacgttaacgttgcagatccggaaacatgggtatttcggcgacttaagttttatcatattatttataggcatttt 67918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 335
Target Start/End: Complemental strand, 7515203 - 7515119
Alignment:
Q  251 caatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    ||||||||| | ||| ||| ||||||||||| || ||||  ||| | ||||| |||| |||||||||||||||| ||||||||||    
T  7515203 caatgatttaggcgtcaacgttgcaaatccggaagcatgtgtatgtcggtgacttaggttttatcatattatttgtaggcatttt 7515119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 247 - 335
Target Start/End: Original strand, 23128703 - 23128791
Alignment:
Q  247 caatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    |||||||||||||||| || ||| ||| | ||||| || ||||  ||||| ||||| |||  |||||||||||||||| ||||||||||    
T  23128703 caatcaatgatttggatgtcaacgttgtagatccggaagcatgggtatttcggtgacttaagttttatcatattatttgtaggcatttt 23128791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 339
Target Start/End: Complemental strand, 30608516 - 30608428
Alignment:
Q  251 caatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcattttaccg 339  Q
    |||||||||||  || ||| ||||| ||| | || ||||  ||||| ||||| ||| ||||||||||||||||| ||||||||||||||    
T  30608516 caatgatttgggtgtcaacgttgcagatctggaatcatgggtatttcggtgacttatattttatcatattatttgtaggcattttaccg 30608428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 293 - 335
Target Start/End: Complemental strand, 14846180 - 14846138
Alignment:
Q  293 attttggtgatttagattttatcatattatttctaggcatttt 335  Q
    |||||||||| |||| |||||||||||||||| ||||||||||    
T  14846180 attttggtgacttaggttttatcatattatttgtaggcatttt 14846138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 320
Target Start/End: Original strand, 3355202 - 3355275
Alignment:
Q  247 caatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatatt 320  Q
    |||| |||||||||||||| ||| ||||| ||||| || ||||| |||||  |||| |||||||||||| ||||    
T  3355202 caatgaatgatttggacgtcaactttgcagatccggaagcatgagtatttcagtgacttagattttatcctatt 3355275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 299 - 335
Target Start/End: Complemental strand, 528303 - 528267
Alignment:
Q  299 gtgatttagattttatcatattatttctaggcatttt 335  Q
    |||||||||||||||||||||||||| |||| |||||    
T  528303 gtgatttagattttatcatattatttgtaggtatttt 528267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 335
Target Start/End: Complemental strand, 33053169 - 33053085
Alignment:
Q  251 caatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    |||||||||| |||| ||| ||||| ||||| || ||||  |||||  |||| |||  |||||||||||||||| ||||||||||    
T  33053169 caatgatttgaacgtcaacgttgcagatccggaagcatgggtatttcagtgacttaagttttatcatattatttgtaggcatttt 33053085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 70; Significance: 2e-31; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 210 - 335
Target Start/End: Complemental strand, 8088254 - 8088129
Alignment:
Q  210 ttcatattgaaagatcagttttagtcaatcatagttacaatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagat 309  Q
    |||||||||||||||||| || ||||||||| || | ||||||||||||||||||| ||| ||||| |||| |||||| || |||| |||||||||||||    
T  8088254 ttcatattgaaagatcagcttcagtcaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaaacaagagtattctggtgatttagat 8088155  T
Q  310 tttatcatattatttctaggcatttt 335  Q
    | ||||||||||||| ||||||||||    
T  8088154 tatatcatattatttgtaggcatttt 8088129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 192 - 335
Target Start/End: Original strand, 39567297 - 39567441
Alignment:
Q  192 ttgtgcgacgttgtttgatt-catattgaaagatcagttttagtcaatcatagttacaatcaatgatttggacgttaacattgcaaatccgaaaacatga 290  Q
    ||||||| |||||||||||| |  ||||||||||||| || || |||||| |  | ||||||||||||||||||| ||||||||| ||||  |||||||     
T  39567297 ttgtgcggcgttgtttgatttcgcattgaaagatcagcttcagacaatcacaaattcaatcaatgatttggacgtcaacattgcagatccagaaacatgg 39567396  T
Q  291 atattttggtgatttagattttatcatattatttctaggcatttt 335  Q
     |||| ||||||||||||||| |||||||||||| ||| ||||||    
T  39567397 gtattctggtgatttagatttcatcatattatttgtagacatttt 39567441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 204 - 335
Target Start/End: Original strand, 14211267 - 14211398
Alignment:
Q  204 gtttgattcatattgaaagatcagttttagtcaatcatagttacaatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgat 303  Q
    ||||| ||| |||||||||||||| || || |||||| |  | ||||||||||||||||||| ||| ||||| ||||  || ||||  |||| |||||||    
T  14211267 gtttggttcgtattgaaagatcagcttcagacaatcacaaatgcaatcaatgatttggacgtcaacgttgcagatccagaagcatgggtattctggtgat 14211366  T
Q  304 ttagattttatcatattatttctaggcatttt 335  Q
    |||||||| |||||||||||| ||||||||||    
T  14211367 ttagatttcatcatattatttgtaggcatttt 14211398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 247 - 331
Target Start/End: Complemental strand, 26878113 - 26878029
Alignment:
Q  247 caatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggca 331  Q
    ||||||||||||||| ||| ||||||||| ||||  || ||||  ||||||||||| ||||||||||||||||||||| ||||||    
T  26878113 caatcaatgatttgggcgtcaacattgcagatccagaagcatgggtattttggtgacttagattttatcatattatttgtaggca 26878029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 204 - 335
Target Start/End: Complemental strand, 19103515 - 19103384
Alignment:
Q  204 gtttgattcatattgaaagatcagttttagtcaatcatagttacaatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgat 303  Q
    ||||||||| ||| ||||||| || || || |||||| |  | ||||||||||||||| ||| || |||||| ||||  || ||||| ||||  ||||||    
T  19103515 gtttgattcgtatcgaaagattagcttcagacaatcacaaattcaatcaatgatttgggcgtcaatattgcagatccagaagcatgagtattccggtgat 19103416  T
Q  304 ttagattttatcatattatttctaggcatttt 335  Q
    |||||||| |||||||||||| ||||||||||    
T  19103415 ttagatttcatcatattatttataggcatttt 19103384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 204 - 335
Target Start/End: Complemental strand, 28540954 - 28540823
Alignment:
Q  204 gtttgattcatattgaaagatcagttttagtcaatcatagttacaatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgat 303  Q
    ||||| ||| ||||||||||| || || || |||||| |  | ||||||||||||||| ||| ||| ||||| ||||  || ||||  ||||||||||||    
T  28540954 gtttggttcgtattgaaagattagcttcagacaatcacaaattcaatcaatgatttgggcgtcaacgttgcagatccagaagcatgggtattttggtgat 28540855  T
Q  304 ttagattttatcatattatttctaggcatttt 335  Q
    |||||||| |||||||||||| ||| ||||||    
T  28540854 ttagatttcatcatattatttgtagacatttt 28540823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 205 - 335
Target Start/End: Complemental strand, 35921043 - 35920913
Alignment:
Q  205 tttgattcatattgaaagatcagttttagtcaatcatagttacaatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatt 304  Q
    |||| ||| |||| ||||||||  || | ||||||| || | |||||||||||||| |||| ||| ||||| ||||| || |||  ||||| | ||||||    
T  35921043 tttgtttcctattaaaagatcaaattcaatcaatcacagattcaatcaatgatttgaacgtcaacgttgcagatccggaagcatcgatattctagtgatt 35920944  T
Q  305 tagattttatcatattatttctaggcatttt 335  Q
    | |||||||||||||||||| ||||||||||    
T  35920943 ttgattttatcatattatttgtaggcatttt 35920913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 247 - 340
Target Start/End: Original strand, 10722844 - 10722937
Alignment:
Q  247 caatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcattttaccgc 340  Q
    ||||||||||||||| ||| ||| ||| | |||| ||| ||||  ||||| ||||| ||||||||||||||||||||| |||||||||| ||||    
T  10722844 caatcaatgatttgggcgtcaacgttgtagatccaaaagcatgggtatttcggtgacttagattttatcatattatttgtaggcatttttccgc 10722937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 271 - 324
Target Start/End: Original strand, 1409605 - 1409658
Alignment:
Q  271 ttgcaaatccgaaaacatgaatattttggtgatttagattttatcatattattt 324  Q
    ||||| ||||||||||||||||||||| |||| |||||||| ||||||||||||    
T  1409605 ttgcagatccgaaaacatgaatattttagtgacttagatttaatcatattattt 1409658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 251 - 335
Target Start/End: Complemental strand, 9113726 - 9113642
Alignment:
Q  251 caatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    ||||||||||||||| ||| ||||| ||||| || |||  |||||| ||||| |||  |||||||||||||||| ||||||||||    
T  9113726 caatgatttggacgtcaacgttgcagatccggaagcatagatatttcggtgacttaagttttatcatattatttgtaggcatttt 9113642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 251 - 335
Target Start/End: Original strand, 13007316 - 13007400
Alignment:
Q  251 caatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    ||||||||||||||| ||| ||||| ||||| || ||||  ||||| ||||| |||  |||||||||||||||| ||||||||||    
T  13007316 caatgatttggacgtcaacgttgcagatccggaagcatgggtatttcggtgacttaagttttatcatattatttgtaggcatttt 13007400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 251 - 335
Target Start/End: Original strand, 34945480 - 34945564
Alignment:
Q  251 caatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    ||||||||||||||| ||| ||||| ||||| || ||||  ||||| ||||| |||  |||||||||||||||| ||||||||||    
T  34945480 caatgatttggacgtcaacgttgcagatccggaagcatgggtatttcggtgacttaagttttatcatattatttataggcatttt 34945564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 251 - 335
Target Start/End: Original strand, 38597884 - 38597968
Alignment:
Q  251 caatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    ||||||||||||||| ||| ||||| ||||| || ||||  |||||  |||| |||| |||||||||||||||| ||||||||||    
T  38597884 caatgatttggacgtcaacgttgcagatccggaagcatgggtatttcagtgacttaggttttatcatattatttgtaggcatttt 38597968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 247 - 334
Target Start/End: Original strand, 6216981 - 6217068
Alignment:
Q  247 caatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcattt 334  Q
    ||||||||||||||| ||| ||| ||||| || || || ||||  ||||| ||||| ||| ||||||||||||||||| |||||||||    
T  6216981 caatcaatgatttgggcgtcaacgttgcagattcggaagcatgtgtatttcggtgacttaaattttatcatattatttgtaggcattt 6217068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 247 - 333
Target Start/End: Complemental strand, 2979311 - 2979225
Alignment:
Q  247 caatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatt 333  Q
    ||||||||||||||| ||| ||| ||||| ||||  || || |  |||| ||||||||||||||| |||||||||||| ||||||||    
T  2979311 caatcaatgatttgggcgtcaacgttgcagatccagaagcacgggtattctggtgatttagatttcatcatattatttgtaggcatt 2979225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 335
Target Start/End: Complemental strand, 24229785 - 24229701
Alignment:
Q  251 caatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    ||||||||||||||| ||  ||||| |||||  | |||| ||||||  |||| |||| |||||||||||||||| ||||||||||    
T  24229785 caatgatttggacgtcaatgttgcagatccggtagcatggatatttctgtgacttaggttttatcatattatttgtaggcatttt 24229701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 335
Target Start/End: Original strand, 38007445 - 38007529
Alignment:
Q  251 caatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    ||||||||||||||| ||| ||| | ||||| || ||||   |||| ||||| |||| |||||||||||||||| ||||||||||    
T  38007445 caatgatttggacgtcaacgttgaagatccggaagcatgtgaatttcggtgaattaggttttatcatattatttgtaggcatttt 38007529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 247 - 335
Target Start/End: Original strand, 41630585 - 41630673
Alignment:
Q  247 caatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    ||||||||||||||| ||| ||| ||||| ||||  || ||||  |||||  |||| ||||||||||||||||||||| ||| ||||||    
T  41630585 caatcaatgatttgggcgtcaacgttgcacatccagaagcatgtgtatttccgtgacttagattttatcatattatttgtagacatttt 41630673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 335
Target Start/End: Complemental strand, 10332598 - 10332464
Alignment:
Q  202 ttgtttgattcatattgaaagatcagttttagtcaatcatagttacaatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtg 301  Q
    ||||||||||||||||||||||| ||  | ||||||||| |  | | ||| ||||||| |||   ||| ||||| ||||| || ||||| |||| || ||    
T  10332598 ttgtttgattcatattgaaagattaggctcagtcaatcacatattcgatcgatgatttagacaccaacgttgcagatccggaagcatgagtattctgatg 10332499  T
Q  302 a-tttagattttatcatattatttctaggcatttt 335  Q
    | ||||||||| |||||||| ||| ||||||||||    
T  10332498 attttagatttcatcatattttttgtaggcatttt 10332464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 293 - 335
Target Start/End: Complemental strand, 14726420 - 14726378
Alignment:
Q  293 attttggtgatttagattttatcatattatttctaggcatttt 335  Q
    |||||||||| |||| |||||||||||||||| ||||||||||    
T  14726420 attttggtgacttaggttttatcatattatttgtaggcatttt 14726378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 283 - 324
Target Start/End: Original strand, 19121031 - 19121072
Alignment:
Q  283 aaacatgaatattttggtgatttagattttatcatattattt 324  Q
    |||||||||||||| ||||| |||| ||||||||||||||||    
T  19121031 aaacatgaatatttcggtgacttaggttttatcatattattt 19121072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 299 - 335
Target Start/End: Complemental strand, 8096451 - 8096415
Alignment:
Q  299 gtgatttagattttatcatattatttctaggcatttt 335  Q
    ||||||||| |||||||||||||||| ||||||||||    
T  8096451 gtgatttaggttttatcatattatttgtaggcatttt 8096415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 335
Target Start/End: Complemental strand, 11976936 - 11976852
Alignment:
Q  251 caatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    ||||||||||||||| ||| ||| | ||| | || ||||   |||| ||||| |||| |||||||||||||||| ||||||||||    
T  11976936 caatgatttggacgtgaacgttgaagatctggaagcatgtgaatttcggtgacttaggttttatcatattatttgtaggcatttt 11976852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 247 - 335
Target Start/End: Original strand, 15571569 - 15571657
Alignment:
Q  247 caatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    |||||||||||||||  || ||| ||||| ||||| || ||||| || ||  |||| ||| ||||||||||||||||| ||| ||||||    
T  15571569 caatcaatgatttgggtgtcaacgttgcagatccggaagcatgagtagttcagtgacttaaattttatcatattatttatagacatttt 15571657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 204 - 260
Target Start/End: Original strand, 16758580 - 16758636
Alignment:
Q  204 gtttgattcatattgaaagatcagttttagtcaatcatagttacaatcaatgatttg 260  Q
    ||||| |||||||||||| ||| || | |||||||||||| | ||||||||||||||    
T  16758580 gtttggttcatattgaaaaatctgtgtcagtcaatcatagattcaatcaatgatttg 16758636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 335
Target Start/End: Complemental strand, 31391754 - 31391670
Alignment:
Q  251 caatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    ||||||||||| ||| ||| ||||| ||||  ||  |||| ||||| ||||| |||| |||||||||||||| | ||||||||||    
T  31391754 caatgatttgggcgtcaacgttgcagatccagaaggatgagtatttcggtgacttaggttttatcatattatatgtaggcatttt 31391670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 68; Significance: 3e-30; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 204 - 335
Target Start/End: Original strand, 47132947 - 47133078
Alignment:
Q  204 gtttgattcatattgaaagatcagttttagtcaatcatagttacaatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgat 303  Q
    ||||| |||||||||||||||||| || ||||||||| || | ||||| ||||||||||||| ||||||||| ||||| || ||||| |||| |||||||    
T  47132947 gtttgcttcatattgaaagatcagcttcagtcaatcacagattcaatcgatgatttggacgtcaacattgcagatccggaagcatgagtattctggtgat 47133046  T
Q  304 ttagattttatcatattatttctaggcatttt 335  Q
    |||||||| |||||||| ||| ||||||||||    
T  47133047 ttagatttcatcatattttttgtaggcatttt 47133078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 210 - 335
Target Start/End: Original strand, 24583000 - 24583125
Alignment:
Q  210 ttcatattgaaagatcagttttagtcaatcatagttacaatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagat 309  Q
    |||||||||||||||||| || ||||||||| || | ||||||||||||||||||| ||| ||||| ||||  || || ||||||| |||||||||||||    
T  24583000 ttcatattgaaagatcagcttcagtcaatcacagattcaatcaatgatttggacgtcaacgttgcagatccagaagcaagaatattctggtgatttagat 24583099  T
Q  310 tttatcatattatttctaggcatttt 335  Q
    | ||||||||||||| ||||||||||    
T  24583100 tatatcatattatttgtaggcatttt 24583125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 210 - 335
Target Start/End: Original strand, 44543322 - 44543447
Alignment:
Q  210 ttcatattgaaagatcagttttagtcaatcatagttacaatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagat 309  Q
    |||||||||||||||||| |||||||||||| || | ||||||||||||||||||| ||| ||||| ||||  || || || |||| | |||||||||||    
T  44543322 ttcatattgaaagatcagctttagtcaatcacagattcaatcaatgatttggacgtcaacgttgcagatccagaagcaagagtattctagtgatttagat 44543421  T
Q  310 tttatcatattatttctaggcatttt 335  Q
    | ||||||||||||| ||||||||||    
T  44543422 tatatcatattatttgtaggcatttt 44543447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 245 - 335
Target Start/End: Original strand, 3228354 - 3228444
Alignment:
Q  245 tacaatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    ||||||||||||||||| ||| ||| ||||| |||||||| |||| |||||| | |||||||| |||||||||||||||| ||||||||||    
T  3228354 tacaatcaatgatttgggcgtcaacgttgcagatccgaaatcatggatatttcgatgatttaggttttatcatattatttgtaggcatttt 3228444  T

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Target: chr1; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 233 - 335
Target Start/End: Complemental strand, 32679160 - 32679058
Alignment:
Q  233 gtcaatcatagttacaatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcat 332  Q
    |||||||| || | ||||| ||||||||||||  ||||||||||||||| || ||||| |||| ||||||||||||||| |||||||| ||| |||||||    
T  32679160 gtcaatcacagattcaatcgatgatttggacgccaacattgcaaatccggaagcatgagtattatggtgatttagatttcatcatattttttgtaggcat 32679061  T
Q  333 ttt 335  Q
    |||    
T  32679060 ttt 32679058  T

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Target: chr1; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 210 - 324
Target Start/End: Original strand, 41994477 - 41994591
Alignment:
Q  210 ttcatattgaaagatcagttttagtcaatcatagttacaatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagat 309  Q
    ||||||||||||||||||||| ||||||||| |  |  |||||||||||||||||| ||| |||| |||||| ||  | || |||| |||||||||||||    
T  41994477 ttcatattgaaagatcagtttcagtcaatcaaatatttaatcaatgatttggacgtcaacgttgctaatccggaagaacgagtattctggtgatttagat 41994576  T
Q  310 tttatcatattattt 324  Q
    |||||||| ||||||    
T  41994577 tttatcattttattt 41994591  T

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Target: chr1; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 204 - 335
Target Start/End: Original strand, 48750229 - 48750360
Alignment:
Q  204 gtttgattcatattgaaagatcagttttagtcaatcatagttacaatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgat 303  Q
    ||||||||| |||||||||||||| || || |||||| |  |  |||||||||||||| ||| ||| ||||| ||||  || ||||  |||| |||||||    
T  48750229 gtttgattcgtattgaaagatcagcttcagacaatcacaaatttaatcaatgatttgggcgtcaacgttgcagatccataagcatgggtattctggtgat 48750328  T
Q  304 ttagattttatcatattatttctaggcatttt 335  Q
    |||||||| |||||||||||| ||||||||||    
T  48750329 ttagatttcatcatattatttgtaggcatttt 48750360  T

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Target: chr1; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 247 - 335
Target Start/End: Complemental strand, 10776466 - 10776378
Alignment:
Q  247 caatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    ||||||||||||||||||| ||||||||| ||||  || ||||| ||||| ||||| |||| ||||||||| |||||| ||||||||||    
T  10776466 caatcaatgatttggacgtcaacattgcagatccagaagcatgagtatttcggtgacttaggttttatcattttatttgtaggcatttt 10776378  T

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Target: chr1; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 251 - 335
Target Start/End: Complemental strand, 21947619 - 21947535
Alignment:
Q  251 caatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    ||||||||||||||| ||| ||||| ||||| || ||||||||||| ||||| |||  |||||||||||||||| ||||||||||    
T  21947619 caatgatttggacgtcaacgttgcagatccggaagcatgaatatttcggtgacttaagttttatcatattatttgtaggcatttt 21947535  T

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Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 205 - 335
Target Start/End: Complemental strand, 13144859 - 13144729
Alignment:
Q  205 tttgattcatattgaaagatcagttttagtcaatcatagttacaatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatt 304  Q
    ||||||||||||||||||| |   |||| ||||| | |  | ||||||||||||||||||| ||  ||||| ||| |||| ||||| |||||  |||| |    
T  13144859 tttgattcatattgaaagaccgactttaatcaattacaaattcaatcaatgatttggacgtcaattttgcagatctgaaagcatgagtatttcagtgact 13144760  T
Q  305 tagattttatcatattatttctaggcatttt 335  Q
    |||||||||||||| ||||| ||||||||||    
T  13144759 tagattttatcataatatttgtaggcatttt 13144729  T

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Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 213 - 339
Target Start/End: Complemental strand, 6217866 - 6217736
Alignment:
Q  213 atattgaaagatcagttttagtcaatcatagttacaatcaatgatttggacgttaacattgcaaatccgaaaacatga----atattttggtgatttaga 308  Q
    ||||||||||||||  || ||||||||| |  | |||||||||||||||| || ||||||||| ||| | || |||||    ||||  | ||||||||||    
T  6217866 atattgaaagatcaacttcagtcaatcacaaattcaatcaatgatttggatgtcaacattgcatatctgtaagcatgagtgaatatcctcgtgatttaga 6217767  T
Q  309 ttttatcatattatttctaggcattttaccg 339  Q
    |||||||||||||||| |||| |||||||||    
T  6217766 ttttatcatattatttgtaggtattttaccg 6217736  T

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Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 247 - 336
Target Start/End: Original strand, 31317823 - 31317912
Alignment:
Q  247 caatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttta 336  Q
    ||||||||||||||| ||| ||| || || | ||| || |||| |||||| ||||||||||| ||||||||||||||| |||||||||||    
T  31317823 caatcaatgatttgggcgtcaacgttacagacccggaagcatggatatttcggtgatttagaatttatcatattatttgtaggcatttta 31317912  T

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Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 210 - 335
Target Start/End: Original strand, 49626963 - 49627088
Alignment:
Q  210 ttcatattgaaagatcagttttagtcaatcatagttacaatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagat 309  Q
    |||||||||||||||||| || ||||||||| |  | ||||||||||||||||||| ||| ||||| || |  || || || |||| || ||||||||||    
T  49626963 ttcatattgaaagatcagcttcagtcaatcacaaattcaatcaatgatttggacgtcaacgttgcagatgcagaagcaagagtattctgatgatttagat 49627062  T
Q  310 tttatcatattatttctaggcatttt 335  Q
    | |||||| |||||| ||| ||||||    
T  49627063 tatatcatcttatttgtagacatttt 49627088  T

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Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 251 - 335
Target Start/End: Original strand, 14872730 - 14872814
Alignment:
Q  251 caatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    ||||||||||| ||| ||| ||||| ||||| || ||||  ||||||||||| |||| |||||||||||||||| ||||||||||    
T  14872730 caatgatttgggcgtcaacgttgcagatccggaagcatgggtattttggtgacttaggttttatcatattatttgtaggcatttt 14872814  T

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Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 247 - 323
Target Start/End: Complemental strand, 27580133 - 27580057
Alignment:
Q  247 caatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatt 323  Q
    |||| |||||||||| ||| ||||||||| || ||||| ||||| ||||| ||||| ||||||||||||||||||||    
T  27580133 caataaatgatttgggcgtcaacattgcagattcgaaagcatgagtatttcggtgacttagattttatcatattatt 27580057  T

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Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 247 - 335
Target Start/End: Original strand, 31984248 - 31984336
Alignment:
Q  247 caatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    ||||||||||||||| ||| ||| ||||||||||| || ||||  ||||| ||||| |||| |||||||||||||||| || |||||||    
T  31984248 caatcaatgatttgggcgtcaacgttgcaaatccggaagcatgggtatttcggtgacttaggttttatcatattatttttaagcatttt 31984336  T

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Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 251 - 335
Target Start/End: Complemental strand, 35484392 - 35484308
Alignment:
Q  251 caatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    ||||||||||||||| ||| ||||| |||||||| ||||  ||||| |||||||| | |||||||||||||||| || |||||||    
T  35484392 caatgatttggacgtcaacgttgcagatccgaaagcatgggtatttcggtgatttcggttttatcatattatttgtaagcatttt 35484308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 256 - 335
Target Start/End: Original strand, 4413210 - 4413289
Alignment:
Q  256 atttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    |||||| ||| ||| ||||| ||||| || ||||||||||| ||||| |||| |||||||||||||||| ||||||||||    
T  4413210 atttgggcgtcaacgttgcagatccggaagcatgaatatttcggtgacttaggttttatcatattatttgtaggcatttt 4413289  T

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Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 204 - 335
Target Start/End: Complemental strand, 36775758 - 36775627
Alignment:
Q  204 gtttgattcatattgaaagatcagttttagtcaatcatagttacaatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgat 303  Q
    ||||| ||| |||||||||||| | || || |||||| |  | ||||||||||||||| ||| ||| ||||| ||||  |||||||  |||   ||||||    
T  36775758 gtttggttcgtattgaaagatcggcttcagacaatcacaaattcaatcaatgatttgggcgtcaacgttgcagatccagaaacatgggtatcccggtgat 36775659  T
Q  304 ttagattttatcatattatttctaggcatttt 335  Q
    |||||||| |||||||||||| ||||||||||    
T  36775658 ttagatttcatcatattatttgtaggcatttt 36775627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 252 - 335
Target Start/End: Complemental strand, 37720149 - 37720066
Alignment:
Q  252 aatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    |||||||||| ||| ||| ||||| |||| ||| ||||  |||| |||| ||||||||||||||||||||||| ||||||||||    
T  37720149 aatgatttgggcgtcaacgttgcagatccaaaagcatgggtattctggttatttagattttatcatattatttgtaggcatttt 37720066  T

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Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 202 - 324
Target Start/End: Original strand, 43412416 - 43412538
Alignment:
Q  202 ttgtttgattcatattgaaagatcagttttagtcaatcatagttacaatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtg 301  Q
    |||||||||||||||||||| |||  ||| | ||||||  |  | |||||||||||||| | || ||| ||||| ||||  || ||||  ||||||||||    
T  43412416 ttgtttgattcatattgaaatatctatttcaatcaatcgcatattcaatcaatgatttgaaagtcaacgttgcagatccagaagcatgcgtattttggtg 43412515  T
Q  302 atttagattttatcatattattt 324  Q
    || ||||||||||||||||||||    
T  43412516 atctagattttatcatattattt 43412538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 339
Target Start/End: Original strand, 15492413 - 15492466
Alignment:
Q  286 catgaatattttggtgatttagattttatcatattatttctaggcattttaccg 339  Q
    |||| ||||| |||||||||||||||||||||||||||| || |||||||||||    
T  15492413 catggatattatggtgatttagattttatcatattatttgtatgcattttaccg 15492466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 210 - 335
Target Start/End: Original strand, 19060959 - 19061084
Alignment:
Q  210 ttcatattgaaagatcagttttagtcaatcatagttacaatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagat 309  Q
    ||||||||||||||| || || ||||||||| || | |||||||| |||||||| | ||  ||| | ||||  ||  | || |||| |||||||||||||    
T  19060959 ttcatattgaaagattagcttcagtcaatcacaggttcaatcaataatttggacatcaatgttgtagatccagaaggaagagtattctggtgatttagat 19061058  T
Q  310 tttatcatattatttctaggcatttt 335  Q
    | ||||||||||||| ||||||||||    
T  19061059 tatatcatattatttgtaggcatttt 19061084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 251 - 340
Target Start/End: Original strand, 32395089 - 32395178
Alignment:
Q  251 caatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcattttaccgc 340  Q
    ||||||||||||||| ||| ||||| || ||||| ||||  ||||| ||||| |||  |||||||||||||||| |||||||||| ||||    
T  32395089 caatgatttggacgtcaacgttgcagattcgaaagcatgggtatttcggtgacttaagttttatcatattatttataggcattttgccgc 32395178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 210 - 335
Target Start/End: Original strand, 44915689 - 44915814
Alignment:
Q  210 ttcatattgaaagatcagttttagtcaatcatagttacaatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagat 309  Q
    |||||||||||||||||   | ||||||| | |  | ||||||||||||||| ||| ||  ||||| ||||| || ||||| ||||| |||   ||||||    
T  44915689 ttcatattgaaagatcaacatcagtcaattacaaattcaatcaatgatttgggcgtcaatgttgcagatccggaagcatgagtatttcggtttcttagat 44915788  T
Q  310 tttatcatattatttctaggcatttt 335  Q
    ||||||||||||||| ||||||||||    
T  44915789 tttatcatattatttgtaggcatttt 44915814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 251 - 335
Target Start/End: Complemental strand, 7337664 - 7337580
Alignment:
Q  251 caatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    |||||||||| |||| ||| ||||| ||||| || ||||  ||||| |||||||| | |||||||||||||||| ||||||||||    
T  7337664 caatgatttgcacgtcaacgttgcagatccggaagcatgggtatttcggtgattttggttttatcatattatttgtaggcatttt 7337580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 232 - 320
Target Start/End: Original strand, 25564070 - 25564158
Alignment:
Q  232 agtcaatcatagttacaatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatatt 320  Q
    ||||||||| || | ||||||||||||||| ||| ||||||||| ||| | || ||||| |||| |||||||||| ||||||| |||||    
T  25564070 agtcaatcacagattcaatcaatgatttgggcgtcaacattgcagatctggaagcatgattattctggtgatttatattttattatatt 25564158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 251 - 335
Target Start/End: Original strand, 45415649 - 45415733
Alignment:
Q  251 caatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    ||||||||||||||| ||| ||||| ||||| || |||   ||||| ||||| |||| |||||||||||||||| ||||||||||    
T  45415649 caatgatttggacgtcaacgttgcagatccggaagcataggtatttcggtgacttaggttttatcatattatttgtaggcatttt 45415733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 271 - 334
Target Start/End: Complemental strand, 13075636 - 13075573
Alignment:
Q  271 ttgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcattt 334  Q
    ||||| ||||||| |||||| |||| | |||||||||||||||||||||||||| || ||||||    
T  13075636 ttgcagatccgaagacatgagtattctagtgatttagattttatcatattatttgtaagcattt 13075573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 204 - 323
Target Start/End: Original strand, 16262905 - 16263024
Alignment:
Q  204 gtttgattcatattgaaagatcagttttagtcaatcatagttacaatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgat 303  Q
    |||||||||||||||||| ||||  |  ||||||||| |  | ||||||||||||||  | | ||| ||||| ||||| || ||||| |||| || ||||    
T  16262905 gtttgattcatattgaaaaatcaactgcagtcaatcacatattcaatcaatgatttgtgcatcaacgttgcagatccggaagcatgagtattctgatgat 16263004  T
Q  304 ttagattttatcatattatt 323  Q
    |||||||||||||| |||||    
T  16263005 ttagattttatcatgttatt 16263024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 289 - 335
Target Start/End: Original strand, 24583275 - 24583321
Alignment:
Q  289 gaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    ||||||| |||||||||||||| ||||||||||||| ||||||||||    
T  24583275 gaatattctggtgatttagattatatcatattatttgtaggcatttt 24583321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 214 - 335
Target Start/End: Original strand, 18939373 - 18939494
Alignment:
Q  214 tattgaaagatcagttttagtcaatcatagttacaatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagatttta 313  Q
    |||||||||||||  || ||||||| | || |  ||||||||||||||||||  || ||||| ||| | || ||||  ||||||||||| ||||| ||||    
T  18939373 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttggacgtcgacgttgcagatctggaagcatgtgtattttggtgacttagaattta 18939472  T
Q  314 tcatattatttctaggcatttt 335  Q
    ||| |||||||  |||||||||    
T  18939473 tcaaattatttgcaggcatttt 18939494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 339
Target Start/End: Complemental strand, 49504596 - 49504508
Alignment:
Q  251 caatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcattttaccg 339  Q
    |||||||||||| || ||| ||||| ||||| || ||||| | ||| |||||||| | ||||| |||| ||||| ||||||||||||||    
T  49504596 caatgatttggatgtcaacgttgcagatccggaagcatgagtgtttcggtgatttgggttttaacataatatttttaggcattttaccg 49504508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 292 - 335
Target Start/End: Original strand, 14489404 - 14489447
Alignment:
Q  292 tattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    |||| |||||||||||||||||||||||||||| |||| |||||    
T  14489404 tattctggtgatttagattttatcatattatttgtaggtatttt 14489447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 300 - 335
Target Start/End: Original strand, 16161968 - 16162003
Alignment:
Q  300 tgatttagattttatcatattatttctaggcatttt 335  Q
    ||||||||||||||||||||||||| ||||||||||    
T  16161968 tgatttagattttatcatattatttgtaggcatttt 16162003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 292 - 335
Target Start/End: Complemental strand, 34413052 - 34413009
Alignment:
Q  292 tattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    |||| ||||||||||||||| |||||||||||| ||||||||||    
T  34413052 tattctggtgatttagatttcatcatattatttgtaggcatttt 34413009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 9341852 - 9341901
Alignment:
Q  286 catgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    |||| ||||| |||||| ||||||||||||||||||||| |||| |||||    
T  9341852 catgtatattctggtgacttagattttatcatattatttgtaggtatttt 9341901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 210 - 335
Target Start/End: Complemental strand, 31692509 - 31692384
Alignment:
Q  210 ttcatattgaaagatcagttttagtcaatcatagttacaatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagat 309  Q
    ||||||||||||||| || |||||||||| | |  |  |||||||||||| || || ||  ||| | ||||||||  ||| |||||||||||| ||  ||    
T  31692509 ttcatattgaaagattagctttagtcaataacaaatttaatcaatgatttcgatgtcaatgttgtagatccgaaagtatgcatattttggtgaattttat 31692410  T
Q  310 tttatcatattatttctaggcatttt 335  Q
    |||||||||| |||| || |||||||    
T  31692409 tttatcatataatttgtatgcatttt 31692384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 335
Target Start/End: Original strand, 5983927 - 5984011
Alignment:
Q  251 caatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    ||||||||||| ||| |||  |||| ||||| || ||||  ||||| ||||| |||  |||||||||||||||| ||||||||||    
T  5983927 caatgatttgggcgtcaacgctgcagatccggaagcatgggtatttcggtgacttatgttttatcatattatttgtaggcatttt 5984011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 291 - 335
Target Start/End: Complemental strand, 51373819 - 51373775
Alignment:
Q  291 atattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    |||||| ||||| ||| ||||||||||||||||| ||||||||||    
T  51373819 atatttcggtgacttatattttatcatattatttgtaggcatttt 51373775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 66; Significance: 4e-29; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 202 - 335
Target Start/End: Complemental strand, 58138 - 58005
Alignment:
Q  202 ttgtttgattcatattgaaagatcagttttagtcaatcatagttacaatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtg 301  Q
    ||||||| |||||| ||||||||||| || ||||||||| || | ||||| ||||||||||||| ||||||||| ||||| || ||||| |||| |||||    
T  58138 ttgtttgtttcatactgaaagatcagcttcagtcaatcacagattcaatcgatgatttggacgtcaacattgcagatccggaagcatgagtattctggtg 58039  T
Q  302 atttagattttatcatattatttctaggcatttt 335  Q
    |||||||||| |||||||| ||| ||||||||||    
T  58038 atttagatttcatcatattttttgtaggcatttt 58005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 65; Significance: 2e-28; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 210 - 334
Target Start/End: Original strand, 36161778 - 36161902
Alignment:
Q  210 ttcatattgaaagatcagttttagtcaatcatagttacaatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagat 309  Q
    ||||||| ||||||| ||||| ||||||||| |  | ||||||||||||||||||  ||| || || |||||||||||||| |||||| |||||||||||    
T  36161778 ttcatatcgaaagattagtttcagtcaatcacatattcaatcaatgatttggacgccaacgttacagatccgaaaacatgagtattttcgtgatttagat 36161877  T
Q  310 tttatcatattatttctaggcattt 334  Q
    ||||||||||||||| |||||||||    
T  36161878 tttatcatattatttgtaggcattt 36161902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 204 - 335
Target Start/End: Original strand, 52944372 - 52944503
Alignment:
Q  204 gtttgattcatattgaaagatcagttttagtcaatcatagttacaatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgat 303  Q
    ||||| |||||||||||||||||| || ||||||||| || | ||||| ||||||||||||| ||| ||||| ||||| || ||||  |||| |||||||    
T  52944372 gtttgtttcatattgaaagatcagcttcagtcaatcacagattcaatcgatgatttggacgtcaacgttgcagatccggaagcatgggtattctggtgat 52944471  T
Q  304 ttagattttatcatattatttctaggcatttt 335  Q
    |||||||| |||||||| ||| ||||||||||    
T  52944472 ttagatttcatcatattttttgtaggcatttt 52944503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 204 - 335
Target Start/End: Complemental strand, 6155274 - 6155140
Alignment:
Q  204 gtttgattcatattgaaagatcagttttagtcaatcatagttacaatcaatgatttggacgttaacattgcaaatccgaa---aacatgaatattttggt 300  Q
    ||||||||||||||||||||||||||| ||||||||| |  | ||||| ||||||| ||||| ||| ||||| ||||| |   |||||  ||||| ||||    
T  6155274 gtttgattcatattgaaagatcagtttcagtcaatcacatgttcaatcgatgatttagacgtaaacgttgcagatccggaagcaacatagatattctggt 6155175  T
Q  301 gatttagattttatcatattatttctaggcatttt 335  Q
    |||||||||| ||||||||||||| ||||||||||    
T  6155174 gatttagattctatcatattatttgtaggcatttt 6155140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 205 - 339
Target Start/End: Complemental strand, 2069627 - 2069493
Alignment:
Q  205 tttgattcatattgaaagatcagttttagtcaatcatagttacaatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatt 304  Q
    |||| |||||||||||| ||||||||||||||||||||| | |||||||| ||||||  || ||| ||||||||    || ||||  |||| ||||||||    
T  2069627 tttggttcatattgaaatatcagttttagtcaatcatagattcaatcaattatttgggtgtcaacgttgcaaatttagaagcatgggtattatggtgatt 2069528  T
Q  305 tagattttatcatattatttctaggcattttaccg 339  Q
    || ||||||||||||||||| || |||||||||||    
T  2069527 tatattttatcatattatttgtatgcattttaccg 2069493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 251 - 340
Target Start/End: Complemental strand, 21686243 - 21686154
Alignment:
Q  251 caatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcattttaccgc 340  Q
    ||||||||||||||| ||| ||||| ||||| || ||||| |||||||||||||||| |||||||||||||||| |||||||||| ||||    
T  21686243 caatgatttggacgtcaacgttgcagatccggaagcatgagtattttggtgatttaggttttatcatattatttgtaggcattttgccgc 21686154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 204 - 335
Target Start/End: Complemental strand, 51888259 - 51888128
Alignment:
Q  204 gtttgattcatattgaaagatcagttttagtcaatcatagttacaatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgat 303  Q
    ||||| |||||||||||||||||  || | ||||||| |  |  |||||||||||| || |||||| ||||| ||| |||| ||||| |||| |||||||    
T  51888259 gtttggttcatattgaaagatcaacttcaatcaatcacaaatttaatcaatgattttgatgttaacgttgcatatctgaaagcatgagtattctggtgat 51888160  T
Q  304 ttagattttatcatattatttctaggcatttt 335  Q
    ||||||||||||||||||||| ||||| ||||    
T  51888159 ttagattttatcatattatttgtaggcgtttt 51888128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 211 - 325
Target Start/End: Original strand, 22300917 - 22301031
Alignment:
Q  211 tcatattgaaagatcagttttagtcaatcatagttacaatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagatt 310  Q
    |||| |||||||||||| |||||||||||| || | ||||| ||||||||||||   || ||||| |||||||| ||||| |||||||||||||||||||    
T  22300917 tcatcttgaaagatcagctttagtcaatcacagattcaatcgatgatttggacgccgacgttgcagatccgaaatcatgagtattttggtgatttagatt 22301016  T
Q  311 ttatcatattatttc 325  Q
    | || ||||| ||||    
T  22301017 tcattatattttttc 22301031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 248 - 334
Target Start/End: Original strand, 54021965 - 54022051
Alignment:
Q  248 aatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcattt 334  Q
    ||||||||||||||| || ||| ||||| ||||||||||||| |||||| ||||| ||||||||||||||||||||| ||| |||||    
T  54021965 aatcaatgatttggatgtcaacgttgcagatccgaaaacatggatatttcggtgacttagattttatcatattatttgtagacattt 54022051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 232 - 335
Target Start/End: Complemental strand, 47320432 - 47320329
Alignment:
Q  232 agtcaatcatagttacaatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggca 331  Q
    ||||||||| || | ||||||||||||||||||| ||| ||||| ||||  || || || |||| |||||||||||||| ||||||||||||| ||||||    
T  47320432 agtcaatcacagattcaatcaatgatttggacgtcaacgttgcagatccagaagcaagagtattctggtgatttagattatatcatattatttgtaggca 47320333  T
Q  332 tttt 335  Q
    ||||    
T  47320332 tttt 47320329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 214 - 335
Target Start/End: Complemental strand, 33332607 - 33332486
Alignment:
Q  214 tattgaaagatcagttttagtcaatcatagttacaatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagatttta 313  Q
    |||||||||||||  || || |||||| || | ||||||||||||||||||| ||| ||||| |||| |||  |||   |||||| ||||||||||||||    
T  33332607 tattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagatttta 33332508  T
Q  314 tcatattatttctaggcatttt 335  Q
    ||||||||||| || |||||||    
T  33332507 tcatattatttgtatgcatttt 33332486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 251 - 335
Target Start/End: Original strand, 2520887 - 2520971
Alignment:
Q  251 caatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    ||||||||||||||| ||| ||||| ||||| || ||||  ||||| |||||||||||||||||| |||||||| ||||||||||    
T  2520887 caatgatttggacgtcaacgttgcagatccggaagcatgggtatttcggtgatttagattttatcgtattatttgtaggcatttt 2520971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 247 - 335
Target Start/End: Original strand, 9048768 - 9048856
Alignment:
Q  247 caatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    ||||||||||||||  ||| ||| ||||||||| |||||||||  |||| || ||||||| ||||||||||||||||| ||||||||||    
T  9048768 caatcaatgatttgagcgtcaacgttgcaaatctgaaaacatgggtattctgatgatttaaattttatcatattatttgtaggcatttt 9048856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 247 - 335
Target Start/End: Complemental strand, 10258901 - 10258813
Alignment:
Q  247 caatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    ||||||||||||||| ||  ||| ||||| | ||| || ||||||||||||||||| ||||||||||||||||||||| ||| ||||||    
T  10258901 caatcaatgatttgggcgccaacgttgcatacccggaagcatgaatattttggtgacttagattttatcatattatttgtagacatttt 10258813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 251 - 335
Target Start/End: Complemental strand, 19853513 - 19853429
Alignment:
Q  251 caatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    ||||||||||||||| ||| ||||| ||||| || |||| |||||| ||||| |||  |||||||||||||||||||||||||||    
T  19853513 caatgatttggacgtcaacgttgcagatccggaagcatggatatttcggtgacttaagttttatcatattatttctaggcatttt 19853429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 204 - 335
Target Start/End: Complemental strand, 31891335 - 31891204
Alignment:
Q  204 gtttgattcatattgaaagatcagttttagtcaatcatagttacaatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgat 303  Q
    ||||| ||| |||||||| |||||||| || |||||| |  | ||| | ||||||||| ||| ||| ||||||||||  || ||||| |||| |||||||    
T  31891335 gtttggttcgtattgaaaaatcagtttcagacaatcacaaattcaaaccatgatttgggcgtcaacgttgcaaatccagaagcatgagtattctggtgat 31891236  T
Q  304 ttagattttatcatattatttctaggcatttt 335  Q
    |||||||| || ||||||||| ||||||||||    
T  31891235 ttagatttcattatattatttgtaggcatttt 31891204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 202 - 336
Target Start/End: Complemental strand, 38166279 - 38166146
Alignment:
Q  202 ttgtttgattcatattgaaagatcagttttagtcaatcatagttacaatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtg 301  Q
    |||||||||| ||||||||||||||  || ||| |||||||| | ||| ||||||||||||| | ||| ||||| ||||| | |||||| |||| || ||    
T  38166279 ttgtttgatttatattgaaagatcaactt-agttaatcatagattcaagcaatgatttggacatcaacgttgcagatccggagacatgagtattctgttg 38166181  T
Q  302 atttagattttatcatattatttctaggcatttta 336  Q
    ||||  ||||||| ||||||||| || ||||||||    
T  38166180 attttaattttataatattatttgtatgcatttta 38166146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 247 - 324
Target Start/End: Complemental strand, 36204384 - 36204307
Alignment:
Q  247 caatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattattt 324  Q
    ||||||||||||||||||| ||| ||||| ||||| ||    ||||||| ||||||||||||||||||||||||||||    
T  36204384 caatcaatgatttggacgtcaacgttgcagatccggaagagagaatattctggtgatttagattttatcatattattt 36204307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 251 - 335
Target Start/End: Original strand, 22611291 - 22611375
Alignment:
Q  251 caatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    ||||||||||||||| ||| ||||| ||||| || ||||| ||||| ||||| |||  |||||||||||||||| ||||||||||    
T  22611291 caatgatttggacgtcaacgttgcagatccggaagcatgagtatttcggtgacttaagttttatcatattatttgtaggcatttt 22611375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 251 - 335
Target Start/End: Complemental strand, 24099068 - 24098984
Alignment:
Q  251 caatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    ||||||||||||||| ||| ||||| ||||| |||||||  |||||  |||| |||| |||||||||||||||| ||||||||||    
T  24099068 caatgatttggacgtcaacgttgcagatccggaaacatgggtatttcagtgacttaggttttatcatattatttgtaggcatttt 24098984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 271 - 335
Target Start/End: Complemental strand, 29960930 - 29960866
Alignment:
Q  271 ttgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    ||||| ||||| |||||| |||||||| |||||||||||||||||||| ||||| ||||||||||    
T  29960930 ttgcagatccggaaacataaatattttagtgatttagattttatcatactatttgtaggcatttt 29960866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 247 - 335
Target Start/End: Original strand, 45418616 - 45418704
Alignment:
Q  247 caatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    ||||||||||||||| | | ||| ||||| |||||||| ||  | ||||| ||||| ||||||||||||||||||||| ||||||||||    
T  45418616 caatcaatgatttgggcatcaacgttgcagatccgaaagcactagtatttcggtgacttagattttatcatattatttgtaggcatttt 45418704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 251 - 335
Target Start/End: Original strand, 53811136 - 53811220
Alignment:
Q  251 caatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    ||||||||||||||| ||| ||||| ||||| || ||||| ||||| ||||| |||  |||||||||||||||| ||||||||||    
T  53811136 caatgatttggacgtcaacgttgcagatccggaagcatgagtatttcggtgacttaagttttatcatattatttgtaggcatttt 53811220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 205 - 335
Target Start/End: Complemental strand, 52933990 - 52933866
Alignment:
Q  205 tttgattcatattgaaagatcagttttagtcaatcatagttacaatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatt 304  Q
    ||||||||||||||||||||||| || | || |||| || | |||||||| |||||||||  |||||| || ||| |       ||||||| ||||||||    
T  52933990 tttgattcatattgaaagatcagcttcaatcgatcaaagattcaatcaataatttggacgacaacatttcagatctgg------gaatattatggtgatt 52933897  T
Q  305 tagattttatcatattatttctaggcatttt 335  Q
    |||||||||||||||||||| |||| |||||    
T  52933896 tagattttatcatattatttgtaggtatttt 52933866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 247 - 333
Target Start/End: Original strand, 32766618 - 32766704
Alignment:
Q  247 caatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatt 333  Q
    ||||||||||||||||||| ||  ||||| ||||| |||||||  ||||| ||||| |||  |||||||||||||||| ||||||||    
T  32766618 caatcaatgatttggacgtcaatgttgcagatccggaaacatgggtatttcggtgacttaagttttatcatattatttgtaggcatt 32766704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 232 - 337
Target Start/End: Complemental strand, 9145910 - 9145806
Alignment:
Q  232 agtcaatcatagttacaatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggca 331  Q
    ||||||||| |||| ||||||||||||| ||| | ||| ||  | ||||| || ||||| |||| |||||||||||||| ||||||||| ||| ||||||    
T  9145910 agtcaatcagagtt-caatcaatgatttagacatcaacgttatatatccggaagcatgagtattctggtgatttagattgtatcatattgtttataggca 9145812  T
Q  332 ttttac 337  Q
    ||||||    
T  9145811 ttttac 9145806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 251 - 335
Target Start/End: Complemental strand, 4142753 - 4142669
Alignment:
Q  251 caatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    ||||||||||||||| ||| ||||| ||||  |||||||| ||||| ||||| |||  |||||||||||||||| ||| ||||||    
T  4142753 caatgatttggacgtcaacgttgcagatccagaaacatgagtatttcggtgacttaagttttatcatattatttgtagacatttt 4142669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 251 - 335
Target Start/End: Original strand, 10496443 - 10496527
Alignment:
Q  251 caatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    ||||||||||| ||| ||| ||||| ||||| || ||||  ||||| ||||| |||| |||||||||||||||| ||||||||||    
T  10496443 caatgatttgggcgtcaactttgcagatccgtaagcatgggtatttcggtgagttaggttttatcatattatttgtaggcatttt 10496527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 251 - 339
Target Start/End: Complemental strand, 26633672 - 26633584
Alignment:
Q  251 caatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcattttaccg 339  Q
    ||||||||||||||| ||  ||||| ||||| || |||||||||||  |||| |||| |||||||||||||  | ||||||||||||||    
T  26633672 caatgatttggacgtcaatgttgcagatccggaagcatgaatatttctgtgacttaggttttatcatattaaatataggcattttaccg 26633584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 256 - 335
Target Start/End: Complemental strand, 29120375 - 29120296
Alignment:
Q  256 atttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    |||||| ||| ||||||||| ||| | || ||||| ||||| ||| | ||||||||||||||||||||| ||||||||||    
T  29120375 atttgggcgtcaacattgcagatctggaagcatgagtatttcggtaacttagattttatcatattatttgtaggcatttt 29120296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 204 - 335
Target Start/End: Original strand, 36194770 - 36194900
Alignment:
Q  204 gtttgattcatattgaaagatcagttttagtcaatcatagttacaatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgat 303  Q
    ||||| ||| |||||||||||||| || |  |||||| |  | |||||||||||||| || | ||  ||||| ||||  |||||||  |||| |||||||    
T  36194770 gtttggttcgtattgaaagatcagcttcaaacaatcacaaattcaatcaatgatttg-acatcaaagttgcagatccagaaacatgggtattctggtgat 36194868  T
Q  304 ttagattttatcatattatttctaggcatttt 335  Q
    |||||||| |||||||||||| ||||||||||    
T  36194869 ttagatttcatcatattatttgtaggcatttt 36194900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 247 - 335
Target Start/End: Original strand, 18935886 - 18935974
Alignment:
Q  247 caatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    |||| |||||||||| | | ||| ||||| |||| ||| |||   |||| ||||||||||||||| |||||||||||| ||||||||||    
T  18935886 caattaatgatttgggcatcaacgttgcagatccaaaagcataggtattctggtgatttagatttcatcatattatttgtaggcatttt 18935974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 291 - 335
Target Start/End: Original strand, 37465630 - 37465674
Alignment:
Q  291 atattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    ||||| |||||||||||||||||||||||||||| || |||||||    
T  37465630 atattctggtgatttagattttatcatattatttgtaagcatttt 37465674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 204 - 335
Target Start/End: Complemental strand, 22038850 - 22038719
Alignment:
Q  204 gtttgattcatattgaaagatcagttttagtcaatcatagttacaatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgat 303  Q
    ||||| ||||||||||||||||   || ||||||||| |  | |||| |||||||| ||| | ||  ||||| ||||  || ||||  ||||| ||||||    
T  22038850 gtttggttcatattgaaagatctacttcagtcaatcacatattcaataaatgattttgacatcaatgttgcagatccagaagcatgtgtatttcggtgat 22038751  T
Q  304 ttagattttatcatattatttctaggcatttt 335  Q
    ||| ||||||||||| ||||| ||||||||||    
T  22038750 ttaaattttatcataatatttgtaggcatttt 22038719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 204 - 335
Target Start/End: Complemental strand, 48351234 - 48351103
Alignment:
Q  204 gtttgattcatattgaaagatcagttttagtcaatcatagttacaatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgat 303  Q
    ||||| || ||||||||||||||| || ||||||||| |  | ||| | |||||||||||||   | ||||| ||| | || ||||| ||||  ||||||    
T  48351234 gtttggtttatattgaaagatcagcttcagtcaatcacatattcaacctatgatttggacgtccgcgttgcagatctggaagcatgagtattacggtgat 48351135  T
Q  304 ttagattttatcatattatttctaggcatttt 335  Q
    ||||||| |||||| |||||| || |||||||    
T  48351134 ttagattgtatcatgttatttgtatgcatttt 48351103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 247 - 333
Target Start/End: Original strand, 33921158 - 33921244
Alignment:
Q  247 caatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatt 333  Q
    |||||||| |||||  ||| ||| ||||| ||||| || ||||  |||||  |||| ||||||||||||||||||||| ||||||||    
T  33921158 caatcaataatttgagcgtcaacgttgcagatccggaagcatgggtatttcagtgacttagattttatcatattatttgtaggcatt 33921244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 335
Target Start/End: Original strand, 55228084 - 55228170
Alignment:
Q  249 atcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    ||||||||||||  ||| ||| ||| | |||||||| ||||| | || | ||||||||||||| |||||||||||| ||| ||||||    
T  55228084 atcaatgatttgcgcgtcaacgttgtatatccgaaagcatgagtgttctcgtgatttagatttaatcatattatttgtagacatttt 55228170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 324
Target Start/End: Original strand, 13634227 - 13634296
Alignment:
Q  255 gatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattattt 324  Q
    ||||||||||| ||| ||||| ||||| |||||||  |||||  ||||||||| ||||||| ||||||||    
T  13634227 gatttggacgtcaacgttgcagatccggaaacatgggtatttcagtgatttaggttttatcttattattt 13634296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 324
Target Start/End: Original strand, 21662541 - 21662618
Alignment:
Q  247 caatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattattt 324  Q
    ||||||||||||||  ||| ||| ||||| ||||| || ||||  ||||| ||||| |||| ||||||||||||||||    
T  21662541 caatcaatgatttgagcgtcaacgttgcagatccggaagcatgggtatttcggtgacttaggttttatcatattattt 21662618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 324
Target Start/End: Original strand, 21671305 - 21671382
Alignment:
Q  247 caatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattattt 324  Q
    ||||||||||||||  ||| ||| ||||| ||||| || ||||  ||||| ||||| |||| ||||||||||||||||    
T  21671305 caatcaatgatttgagcgtcaacgttgcagatccggaagcatgggtatttcggtgacttaggttttatcatattattt 21671382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 335
Target Start/End: Complemental strand, 22305591 - 22305538
Alignment:
Q  282 aaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    |||| |||| ||||||| ||| ||||||||||||||||||||| |||| |||||    
T  22305591 aaaatatgagtattttgatgacttagattttatcatattatttgtaggtatttt 22305538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 299 - 335
Target Start/End: Original strand, 9714066 - 9714102
Alignment:
Q  299 gtgatttagattttatcatattatttctaggcatttt 335  Q
    |||| ||||||||||||||||||||| ||||||||||    
T  9714066 gtgaattagattttatcatattatttgtaggcatttt 9714102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 335
Target Start/End: Complemental strand, 56040647 - 56040563
Alignment:
Q  251 caatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    ||||||||||| ||  ||| ||||| ||||  || ||||  ||||| ||||| |||| |||||||||||||||| ||||||||||    
T  56040647 caatgatttgggcggcaacgttgcagatccagaagcatgggtatttcggtgacttaggttttatcatattatttgtaggcatttt 56040563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 62; Significance: 1e-26; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 210 - 335
Target Start/End: Complemental strand, 17249190 - 17249065
Alignment:
Q  210 ttcatattgaaagatcagttttagtcaatcatagttacaatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagat 309  Q
    ||||||||||||||||||||| ||||||||| || | ||||||||||||||||||| ||| ||||| ||||  || || || |||| |||||||||||||    
T  17249190 ttcatattgaaagatcagtttcagtcaatcacagattcaatcaatgatttggacgtcaacgttgcagatccataagcaagagtattctggtgatttagat 17249091  T
Q  310 tttatcatattatttctaggcatttt 335  Q
    | ||||||||||||| ||| ||||||    
T  17249090 tatatcatattatttgtagacatttt 17249065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 202 - 335
Target Start/End: Complemental strand, 29574679 - 29574546
Alignment:
Q  202 ttgtttgattcatattgaaagatcagttttagtcaatcatagttacaatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtg 301  Q
    ||||||||||||||||||||||| || || ||||||||| || | ||||||||||||||||||  ||| ||||| ||||| || |||||||||| || ||    
T  29574679 ttgtttgattcatattgaaagattagcttcagtcaatcacagattcaatcaatgatttggacgccaacgttgcagatccggaagcatgaatattatgatg 29574580  T
Q  302 atttagattttatcatattatttctaggcatttt 335  Q
    |||||||||| |||||||| ||| ||| ||||||    
T  29574579 atttagatttcatcatattttttgtagtcatttt 29574546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 204 - 335
Target Start/End: Original strand, 10929716 - 10929847
Alignment:
Q  204 gtttgattcatattgaaagatcagttttagtcaatcatagttacaatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgat 303  Q
    ||||| ||||| |||||| ||||| || ||||||||| || | ||||||||||||||||| | ||| ||||| ||||| || ||||  |||| |||||||    
T  10929716 gtttggttcatgttgaaaaatcagcttcagtcaatcacagattcaatcaatgatttggacatcaacgttgcagatccggaagcatgtgtattctggtgat 10929815  T
Q  304 ttagattttatcatattatttctaggcatttt 335  Q
    ||| ||||||||||||||||| ||||||||||    
T  10929816 ttaaattttatcatattatttataggcatttt 10929847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 210 - 335
Target Start/End: Complemental strand, 32448662 - 32448534
Alignment:
Q  210 ttcatattgaaagatcagttttagtcaatcatagttacaatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttag-- 307  Q
    |||||||||||||||||| || ||||||||| || | ||||||||||||||||||| ||| ||||| ||||  || || || |||| |||||||||||      
T  32448662 ttcatattgaaagatcagcttcagtcaatcacagattcaatcaatgatttggacgtcaacgttgcagatccagaagcaagagtattctggtgatttagat 32448563  T
Q  308 -attttatcatattatttctaggcatttt 335  Q
     ||| ||||||||||||| ||||||||||    
T  32448562 tattatatcatattatttgtaggcatttt 32448534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 214 - 335
Target Start/End: Complemental strand, 19595942 - 19595821
Alignment:
Q  214 tattgaaagatcagttttagtcaatcatagttacaatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagatttta 313  Q
    |||||||||||||| |||| |||||||||  | |||| |||||||||| ||| || |||||  ||| | || ||||||||||||| |||||| |||||||    
T  19595942 tattgaaagatcagctttaatcaatcataaattcaataaatgatttgggcgtcaaaattgccgatctggaagcatgaatattttgatgattttgatttta 19595843  T
Q  314 tcatattatttctaggcatttt 335  Q
    ||||||||||| |||| |||||    
T  19595842 tcatattatttgtaggtatttt 19595821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 204 - 335
Target Start/End: Complemental strand, 10237265 - 10237134
Alignment:
Q  204 gtttgattcatattgaaagatcagttttagtcaatcatagttacaatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgat 303  Q
    ||||| ||| |||||||||||||| || || |||||| |  | ||||||||||||||||||| ||| ||||| ||||  || ||||  |||| || ||||    
T  10237265 gtttggttcgtattgaaagatcagcttcagacaatcacaaattcaatcaatgatttggacgtcaacgttgcagatccagaagcatgggtattctgatgat 10237166  T
Q  304 ttagattttatcatattatttctaggcatttt 335  Q
    |||||||| |||||||||||| ||||||||||    
T  10237165 ttagatttcatcatattatttgtaggcatttt 10237134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 204 - 335
Target Start/End: Original strand, 24461494 - 24461625
Alignment:
Q  204 gtttgattcatattgaaagatcagttttagtcaatcatagttacaatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgat 303  Q
    ||||| |||||||||||||||||  || |||||| || || | ||||| ||||||||||||  ||| ||||| ||||| || ||| | ||||||||||||    
T  24461494 gtttggttcatattgaaagatcaacttcagtcaaccacagattcaatcgatgatttggacgccaacgttgcagatccggaagcattagtattttggtgat 24461593  T
Q  304 ttagattttatcatattatttctaggcatttt 335  Q
    |||||||| |||||||| ||| |||| |||||    
T  24461594 ttagatttcatcatattttttgtaggtatttt 24461625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 202 - 335
Target Start/End: Original strand, 14423374 - 14423507
Alignment:
Q  202 ttgtttgattcatattgaaagatcagttttagtcaatcatagttacaatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtg 301  Q
    ||||||| ||| ||||||||||||   |||||||||| | || |  |||||||||||||||||| ||| |||||||||   |||||||  ||||| |||     
T  14423374 ttgtttggttcttattgaaagatcgactttagtcaattacagatttaatcaatgatttggacgtcaacgttgcaaatctagaaacatgggtatttaggtt 14423473  T
Q  302 atttagattttatcatattatttctaggcatttt 335  Q
    | ||||||||||||||||||| | ||||||||||    
T  14423474 agttagattttatcatattatatttaggcatttt 14423507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 251 - 335
Target Start/End: Original strand, 1421774 - 1421858
Alignment:
Q  251 caatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    ||||||||||||||| ||| ||||| ||||| || ||||  ||||| |||||||||| |||||||||||||||| ||||||||||    
T  1421774 caatgatttggacgtcaacgttgcagatccggaagcatgggtatttcggtgatttaggttttatcatattatttgtaggcatttt 1421858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 251 - 335
Target Start/End: Complemental strand, 31210609 - 31210525
Alignment:
Q  251 caatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    ||||||||||||||| ||| ||||| ||| |||| ||||  ||||| |||||||||| |||||||||||||||| ||||||||||    
T  31210609 caatgatttggacgtcaacgttgcagatcagaaagcatgggtatttcggtgatttaggttttatcatattatttgtaggcatttt 31210525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 251 - 335
Target Start/End: Original strand, 36691972 - 36692056
Alignment:
Q  251 caatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    ||||||||||||||| ||||||||| |||| ||| ||||   |||| |||||||||| |||||||||||||||| ||||||||||    
T  36691972 caatgatttggacgtcaacattgcagatcctaaagcatgtgaatttcggtgatttaggttttatcatattatttgtaggcatttt 36692056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 210 - 335
Target Start/End: Complemental strand, 12647152 - 12647030
Alignment:
Q  210 ttcatattgaaagatcagttttagtcaatcatagttacaatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagat 309  Q
    |||||||||||||||||| || ||||||||| || | ||||| || |||||||||  ||  ||| | ||||| || ||||||||||||||||||||||||    
T  12647152 ttcatattgaaagatcagcttcagtcaatcacagattcaatcgatcatttggacgccaatgttgtagatccggaagcatgaatattttggtgatttagat 12647053  T
Q  310 tttatcatattatttctaggcatttt 335  Q
    |   ||||||| ||| ||||||||||    
T  12647052 t---tcatattttttgtaggcatttt 12647030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 204 - 335
Target Start/End: Complemental strand, 23933668 - 23933537
Alignment:
Q  204 gtttgattcatattgaaagatcagttttagtcaatcatagttacaatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgat 303  Q
    ||||| ||| ||||||||| |||  || ||||||||| || | |||||||| |||||||||| ||| || || ||| | || |||| ||| | |||||||    
T  23933668 gtttggttcttattgaaagttcaacttcagtcaatcacagattcaatcaattatttggacgtcaacgttacatatctggaagcatggataatctggtgat 23933569  T
Q  304 ttagattttatcatattatttctaggcatttt 335  Q
    ||||||||||||||||||||| |||| |||||    
T  23933568 ttagattttatcatattatttgtaggaatttt 23933537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 204 - 335
Target Start/End: Complemental strand, 28534003 - 28533872
Alignment:
Q  204 gtttgattcatattgaaagatcagttttagtcaatcatagttacaatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgat 303  Q
    ||||||||| ||||||||||  || || | ||||||| || | |||| |||||||||||||| ||| |||||||||   ||||||  |||||  ||||||    
T  28534003 gtttgattcctattgaaagacaagcttcactcaatcacagattcaataaatgatttggacgtcaactttgcaaatctagaaacattgatattcgggtgat 28533904  T
Q  304 ttagattttatcatattatttctaggcatttt 335  Q
    || |||||||||||||||||| |||| |||||    
T  28533903 ttggattttatcatattatttgtaggtatttt 28533872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 204 - 336
Target Start/End: Original strand, 14955580 - 14955712
Alignment:
Q  204 gtttgattcatattgaaagatcagttttagtcaatcatagttacaatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgat 303  Q
    ||||| |||||||||||| ||||  || ||  |||||||  | ||||||||||||||  ||| ||| ||||| ||||  |||||||  |||| || ||||    
T  14955580 gtttggttcatattgaaatatcatcttcagataatcataaattcaatcaatgatttgagcgtcaacgttgcagatccagaaacatgtgtattctgatgat 14955679  T
Q  304 ttagattttatcatattatttctaggcatttta 336  Q
    ||||||||||||||||||||| ||| |||||||    
T  14955680 ttagattttatcatattatttgtagacatttta 14955712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 247 - 335
Target Start/End: Complemental strand, 17994736 - 17994648
Alignment:
Q  247 caatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    ||||||||||||||||||| ||| ||||| ||||| || |||   ||||| ||||| ||| ||||||||||||||||| ||||||||||    
T  17994736 caatcaatgatttggacgtcaacgttgcacatccggaaccataggtatttcggtgacttaaattttatcatattatttgtaggcatttt 17994648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 247 - 335
Target Start/End: Complemental strand, 25509074 - 25508986
Alignment:
Q  247 caatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    ||||||||||| ||| ||| ||| ||||||||||| |||||||  ||||| | ||| |||||||||||| |||||||| ||||||||||    
T  25509074 caatcaatgatctgggcgtcaacgttgcaaatccggaaacatgggtatttcgatgacttagattttatcgtattatttgtaggcatttt 25508986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 251 - 335
Target Start/End: Original strand, 31788554 - 31788638
Alignment:
Q  251 caatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    ||||||||||||||| ||| ||||| |||||||| ||||| |||||  |||| |||| ||||| |||||||||| ||||||||||    
T  31788554 caatgatttggacgtcaacgttgcagatccgaaagcatgagtatttcagtgacttaggttttaacatattatttgtaggcatttt 31788638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 247 - 335
Target Start/End: Original strand, 37994378 - 37994466
Alignment:
Q  247 caatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    |||| |||||||||||||| | | ||||| ||||| ||  | |||||||  ||||||||||||||||||||||||||| ||||||||||    
T  37994378 caatgaatgatttggacgtcagcgttgcagatccggaagaaagaatattccggtgatttagattttatcatattatttgtaggcatttt 37994466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 237 - 323
Target Start/End: Complemental strand, 32092333 - 32092247
Alignment:
Q  237 atcatagttacaatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatt 323  Q
    ||||||| | |||||||||||||  |||| |||||| || |||| |||||||||||||| || | ||||||||||| ||||||||||    
T  32092333 atcatagattcaatcaatgatttcaacgtcaacattacagatccaaaaacatgaatattctgttaatttagattttgtcatattatt 32092247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 210 - 339
Target Start/End: Original strand, 6436664 - 6436793
Alignment:
Q  210 ttcatattgaaagatcagttttagtcaatcatagttacaatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagat 309  Q
    |||||| ||||||||||| || ||||||||| |  | ||||||||||||||||||| ||  || || ||||  |||||||| || | | ||| |||| ||    
T  6436664 ttcataatgaaagatcagcttcagtcaatcaaatattcaatcaatgatttggacgtcaatgttacagatcctgaaacatgagtaatctagtggtttaaat 6436763  T
Q  310 tttatcatattatttctaggcattttaccg 339  Q
    |||||||||||| || |||| |||||||||    
T  6436764 tttatcatattacttgtaggtattttaccg 6436793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 210 - 335
Target Start/End: Original strand, 37416767 - 37416892
Alignment:
Q  210 ttcatattgaaagatcagttttagtcaatcatagttacaatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagat 309  Q
    |||||||||||| ||||  |  ||||||||| || | |||||||||||||||| || |||||||||   ||| || ||||  |||| | |||||||| ||    
T  37416767 ttcatattgaaatatcaactcgagtcaatcacagattcaatcaatgatttggatgtcaacattgcaggcccggaagcatgtgtattctagtgatttatat 37416866  T
Q  310 tttatcatattatttctaggcatttt 335  Q
    ||||||||||||||| ||| ||||||    
T  37416867 tttatcatattatttgtagacatttt 37416892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 247 - 335
Target Start/End: Original strand, 3309039 - 3309127
Alignment:
Q  247 caatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    ||||||||||||||| ||||||| ||||| ||||  || ||||  |||| |||||||||| |||| |||||||||||| ||| ||||||    
T  3309039 caatcaatgatttgggcgttaacgttgcagatccagaagcatgggtattctggtgatttatatttcatcatattatttgtagtcatttt 3309127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 251 - 335
Target Start/End: Original strand, 4778851 - 4778935
Alignment:
Q  251 caatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    ||||||||||||||| ||| ||||| ||||| || ||||  ||||| ||||| |||  |||||||||||||||| ||||||||||    
T  4778851 caatgatttggacgtcaacgttgcagatccggaagcatgggtatttcggtgacttaagttttatcatattatttgtaggcatttt 4778935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 251 - 335
Target Start/End: Complemental strand, 7677875 - 7677791
Alignment:
Q  251 caatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    ||||||||||||| | ||| ||||| |||||||| ||||  |||||  |||| |||| |||||||||||||||| ||||||||||    
T  7677875 caatgatttggacatcaacgttgcagatccgaaagcatgggtatttccgtgaattaggttttatcatattatttttaggcatttt 7677791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 247 - 335
Target Start/End: Complemental strand, 19028920 - 19028832
Alignment:
Q  247 caatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    ||||||||||||||  ||| ||| ||||||||||  || |||| |||||| ||| | ||||||||||||||| ||||| ||||||||||    
T  19028920 caatcaatgatttgagcgtcaacgttgcaaatccagaagcatggatatttcggtaacttagattttatcatactatttgtaggcatttt 19028832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 247 - 335
Target Start/End: Complemental strand, 29279576 - 29279488
Alignment:
Q  247 caatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    ||||||||||||||  ||| ||  ||||| ||||| |||||||| | ||| ||||| ||| ||||||||||||||||| ||||||||||    
T  29279576 caatcaatgatttgtgcgtcaatgttgcagatccggaaacatgagtttttcggtgacttaaattttatcatattatttgtaggcatttt 29279488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 214 - 335
Target Start/End: Complemental strand, 30400074 - 30399947
Alignment:
Q  214 tattgaaagatcagttttagtcaatcatagttacaatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattt------tggtgatttag 307  Q
    |||||||||||||  || ||||||| | |  | ||||||||||||||| ||| ||| ||||| |||||||| ||||| |||||      | |||| ||||    
T  30400074 tattgaaagatcaacttcagtcaattacaaattcaatcaatgatttgggcgtcaacgttgcagatccgaaagcatgagtatttgatttttagtgacttag 30399975  T
Q  308 attttatcatattatttctaggcatttt 335  Q
    ||||||||||||||||| ||||||||||    
T  30399974 attttatcatattatttgtaggcatttt 30399947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 247 - 335
Target Start/End: Complemental strand, 31128786 - 31128698
Alignment:
Q  247 caatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    ||||||||||||| | ||| ||| ||||| ||||| || ||||| |||||  |||| ||| ||||||||||||||||| ||||||||||    
T  31128786 caatcaatgatttaggcgtcaacgttgcagatccggaagcatgagtatttcagtgacttatattttatcatattatttgtaggcatttt 31128698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 251 - 335
Target Start/End: Complemental strand, 33585737 - 33585653
Alignment:
Q  251 caatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    ||||||||||||||| ||| ||||| ||||| || ||||| || || |||||||||  |||||||||||||||| || |||||||    
T  33585737 caatgatttggacgtcaacgttgcagatccggaagcatgagtaattcggtgatttaagttttatcatattatttgtatgcatttt 33585653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 256 - 335
Target Start/End: Original strand, 7646581 - 7646660
Alignment:
Q  256 atttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    |||||||||| ||| ||||| ||||| || ||||| ||||| ||||| |||  |||||||||||||||| ||||||||||    
T  7646581 atttggacgtcaacgttgcagatccggaagcatgagtatttcggtgacttaagttttatcatattatttgtaggcatttt 7646660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 204 - 335
Target Start/End: Complemental strand, 12554230 - 12554099
Alignment:
Q  204 gtttgattcatattgaaagatcagttttagtcaatcatagttacaatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgat 303  Q
    |||||||||||||||||| ||||  || ||||||| | || | |||||||||||||||  ||  |||||||| ||  | || ||||| |||||  || |     
T  12554230 gtttgattcatattgaaatatcaacttcagtcaattacagattcaatcaatgatttgggtgtggacattgcatatttggaagcatgagtatttcagtaac 12554131  T
Q  304 ttagattttatcatattatttctaggcatttt 335  Q
    |||| |||||||||||||||| ||||||||||    
T  12554130 ttaggttttatcatattatttgtaggcatttt 12554099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 204 - 335
Target Start/End: Complemental strand, 33760242 - 33760111
Alignment:
Q  204 gtttgattcatattgaaagatcagttttagtcaatcatagttacaatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgat 303  Q
    |||||||||||||||||||||||  || ||||||| ||||   ||||||||||||||  |||  |  ||||| ||||  |||||||  |||||  ||||     
T  33760242 gtttgattcatattgaaagatcaacttcagtcaattatagactcaatcaatgatttgagcgtcgatgttgcagatccataaacatgtgtatttcagtgac 33760143  T
Q  304 ttagattttatcatattatttctaggcatttt 335  Q
    |||||  |||||||||||||| ||||||||||    
T  33760142 ttagaacttatcatattatttgtaggcatttt 33760111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 333
Target Start/End: Complemental strand, 36943123 - 36943041
Alignment:
Q  251 caatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatt 333  Q
    ||||||||||| ||| ||| ||||| ||||| |||||||  ||||| ||||| ||  ||||||||||||||||| ||||||||    
T  36943123 caatgatttgggcgtcaacgttgcagatccggaaacatgggtatttcggtgacttgaattttatcatattatttgtaggcatt 36943041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 247 - 324
Target Start/End: Complemental strand, 19062358 - 19062281
Alignment:
Q  247 caatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattattt 324  Q
    ||||||||||||||||||| ||| || || |||||||| ||||  ||||| ||||| |||  ||||||||||||||||    
T  19062358 caatcaatgatttggacgtcaacgtttcagatccgaaagcatgggtatttcggtgacttaagttttatcatattattt 19062281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 335
Target Start/End: Complemental strand, 4041596 - 4041512
Alignment:
Q  251 caatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    ||||||||||||||| ||| ||||| |||||||| ||||| ||||| | | | ||||  ||||||||||||||| ||| ||||||    
T  4041596 caatgatttggacgtcaacgttgcagatccgaaagcatgagtatttcgataacttaggctttatcatattatttgtagccatttt 4041512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 247 - 323
Target Start/End: Complemental strand, 29173726 - 29173650
Alignment:
Q  247 caatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatt 323  Q
    |||||||| ||||||  || ||| ||||| |||||||| ||||  ||||| ||||| ||||||||||||||||||||    
T  29173726 caatcaattatttgggtgtcaacgttgcagatccgaaagcatgggtatttcggtgacttagattttatcatattatt 29173650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 271 - 335
Target Start/End: Complemental strand, 37876588 - 37876524
Alignment:
Q  271 ttgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    ||||| |||||||| ||||  ||||| ||||| ||| ||||||||||||||||| ||||||||||    
T  37876588 ttgcagatccgaaagcatgggtatttcggtgacttaaattttatcatattatttgtaggcatttt 37876524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 335
Target Start/End: Original strand, 38445264 - 38445348
Alignment:
Q  251 caatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    ||||||||||||||| ||| ||||| ||||| || | ||  ||||| ||||| |||  |||||||||||||||| ||||||||||    
T  38445264 caatgatttggacgtcaacgttgcagatccggaagcgtgggtatttcggtgacttaagttttatcatattatttgtaggcatttt 38445348  T

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Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 247 - 335
Target Start/End: Original strand, 41694715 - 41694803
Alignment:
Q  247 caatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    ||||||||||||||| | | ||| ||||| || |  || |||| | ||| |||||| ||||||||||||||||||||| ||||||||||    
T  41694715 caatcaatgatttgggcatcaacgttgcagatgcagaagcatgtagattctggtgacttagattttatcatattatttataggcatttt 41694803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 247 - 322
Target Start/End: Original strand, 8809374 - 8809449
Alignment:
Q  247 caatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattat 322  Q
    ||||||||||||||| ||  ||||||||| ||||| || |||||  ||||  |||| |||||||||||||||||||    
T  8809374 caatcaatgatttgggcgccaacattgcagatccggaagcatgagaatttcagtgacttagattttatcatattat 8809449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 252 - 335
Target Start/End: Complemental strand, 9169259 - 9169176
Alignment:
Q  252 aatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    |||||||||||||| ||| ||||| ||||| || ||||  ||||| ||||| |||  | |||||||||||||| ||||||||||    
T  9169259 aatgatttggacgtcaacgttgcagatccggaagcatgggtatttcggtgacttaagtcttatcatattatttgtaggcatttt 9169176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 253 - 335
Target Start/End: Complemental strand, 4904145 - 4904063
Alignment:
Q  253 atgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    |||||||||  || ||| ||||| ||||  || |||| |||||| ||||| ||||||||||||||||||||| ||| ||||||    
T  4904145 atgatttgggtgtcaacgttgcagatccagaagcatggatatttcggtgacttagattttatcatattatttgtagacatttt 4904063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 261
Target Start/End: Original strand, 17151474 - 17151531
Alignment:
Q  204 gtttgattcatattgaaagatcagttttagtcaatcatagttacaatcaatgatttgg 261  Q
    ||||||||| ||||||||||||| ||| ||||||| | || | |||||||||||||||    
T  17151474 gtttgattcctattgaaagatcaatttcagtcaattacagattcaatcaatgatttgg 17151531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 324
Target Start/End: Complemental strand, 39285281 - 39285204
Alignment:
Q  247 caatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattattt 324  Q
    |||||||| |||||||||  |||||||||||||  ||| |||||||||| || | ||||  | |||||||||||||||    
T  39285281 caatcaataatttggacgacaacattgcaaatcaaaaagcatgaatattatgatcattttaactttatcatattattt 39285204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 339
Target Start/End: Original strand, 1415655 - 1415743
Alignment:
Q  251 caatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcattttaccg 339  Q
    ||||||||||| ||| ||| ||| | ||||| || ||||   |||| ||||| |||| |||||||| ||||||| ||||||||||||||    
T  1415655 caatgatttgggcgtcaacgttgaagatccggaagcatgtgaatttcggtgacttaggttttatcagattatttgtaggcattttaccg 1415743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 324
Target Start/End: Complemental strand, 6358842 - 6358810
Alignment:
Q  292 tattttggtgatttagattttatcatattattt 324  Q
    |||| ||||||||||||||||||||||||||||    
T  6358842 tattatggtgatttagattttatcatattattt 6358810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 60; Significance: 2e-25; HSPs: 58)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 204 - 335
Target Start/End: Complemental strand, 50194383 - 50194252
Alignment:
Q  204 gtttgattcatattgaaagatcagttttagtcaatcatagttacaatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgat 303  Q
    ||||| |||||||||||||| ||| || ||||||||| || | ||||| ||||||||||||||||| ||||| ||||| || ||||| |||| |||||||    
T  50194383 gtttgtttcatattgaaagaccagcttcagtcaatcacagattcaatcgatgatttggacgttaacgttgcagatccggaagcatgagtattctggtgat 50194284  T
Q  304 ttagattttatcatattatttctaggcatttt 335  Q
    |||||| | |||||||| ||| ||||||||||    
T  50194283 ttagatatcatcatattttttgtaggcatttt 50194252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 210 - 335
Target Start/End: Complemental strand, 53807900 - 53807775
Alignment:
Q  210 ttcatattgaaagatcagttttagtcaatcatagttacaatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagat 309  Q
    |||||||||||||||||  || ||||||||| || | ||||||||||||||||||| ||| ||||| ||||  || || || |||| |||||||||||||    
T  53807900 ttcatattgaaagatcaacttcagtcaatcacagattcaatcaatgatttggacgtcaacgttgcatatccagaagcaagagtattctggtgatttagat 53807801  T
Q  310 tttatcatattatttctaggcatttt 335  Q
    | ||||||||||||| ||||||||||    
T  53807800 tatatcatattatttgtaggcatttt 53807775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 204 - 335
Target Start/End: Original strand, 35175444 - 35175575
Alignment:
Q  204 gtttgattcatattgaaagatcagttttagtcaatcatagttacaatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgat 303  Q
    ||||| || ||||||||||||||| || ||||||||| |  | ||||||||||||||||| | ||| ||||| |||||||||||||| |||| || ||||    
T  35175444 gtttggtttatattgaaagatcagcttcagtcaatcacatattcaatcaatgatttggacatcaacgttgcagatccgaaaacatgagtattctgatgat 35175543  T
Q  304 ttagattttatcatattatttctaggcatttt 335  Q
    ||| |||| |||||||| ||| ||||||||||    
T  35175544 ttatatttcatcatattgtttgtaggcatttt 35175575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 210 - 335
Target Start/End: Complemental strand, 628965 - 628840
Alignment:
Q  210 ttcatattgaaagatcagttttagtcaatcatagttacaatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagat 309  Q
    |||||||||||||||||| || ||||||||| || | ||||||||||||||||| | ||| ||| | ||||  || || || |||| |||||||||||||    
T  628965 ttcatattgaaagatcagcttcagtcaatcacagattcaatcaatgatttggacatcaacgttgtagatccagaagcaagagtattctggtgatttagat 628866  T
Q  310 tttatcatattatttctaggcatttt 335  Q
    | ||||||||||||| ||||||||||    
T  628865 tatatcatattatttgtaggcatttt 628840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 210 - 335
Target Start/End: Original strand, 29922103 - 29922228
Alignment:
Q  210 ttcatattgaaagatcagttttagtcaatcatagttacaatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagat 309  Q
    |||||||||||||||||  || |  |||||| |  | ||||||||||||||||||| ||| ||||| ||||  |||||||| | || |||||||||||||    
T  29922103 ttcatattgaaagatcaacttcaaccaatcacatattcaatcaatgatttggacgtcaacgttgcagatccagaaacatgattgttctggtgatttagat 29922202  T
Q  310 tttatcatattatttctaggcatttt 335  Q
    ||||||||||| ||| ||||||||||    
T  29922203 tttatcatattgtttgtaggcatttt 29922228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 210 - 335
Target Start/End: Original strand, 29971256 - 29971381
Alignment:
Q  210 ttcatattgaaagatcagttttagtcaatcatagttacaatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagat 309  Q
    |||||||||||||||||  || |  |||||| |  | ||||||||||||||||||| ||| ||||| ||||  |||||||| | || |||||||||||||    
T  29971256 ttcatattgaaagatcaacttcaaccaatcacatattcaatcaatgatttggacgtcaacgttgcagatccagaaacatgattgttctggtgatttagat 29971355  T
Q  310 tttatcatattatttctaggcatttt 335  Q
    ||||||||||| ||| ||||||||||    
T  29971356 tttatcatattgtttgtaggcatttt 29971381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 251 - 335
Target Start/End: Complemental strand, 45568446 - 45568362
Alignment:
Q  251 caatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    ||||||||||||||| ||| ||||| ||||| || |||| |||||| |||||||||| |||||||||||||||| ||||||||||    
T  45568446 caatgatttggacgtcaactttgcagatccggaagcatggatatttgggtgatttaggttttatcatattatttgtaggcatttt 45568362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 204 - 335
Target Start/End: Original strand, 51923767 - 51923898
Alignment:
Q  204 gtttgattcatattgaaagatcagttttagtcaatcatagttacaatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgat 303  Q
    ||||| ||| |||||||||||||| || || |||||  |  | ||||||||||||||||||| ||| ||||| ||||  || ||||  |||| |||||||    
T  51923767 gtttggttcgtattgaaagatcagcttcagacaatcgcaaattcaatcaatgatttggacgtcaacgttgcagatccagaagcatgggtattctggtgat 51923866  T
Q  304 ttagattttatcatattatttctaggcatttt 335  Q
    |||||||| |||||||||||| ||||||||||    
T  51923867 ttagatttcatcatattatttgtaggcatttt 51923898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 204 - 335
Target Start/End: Original strand, 53508266 - 53508397
Alignment:
Q  204 gtttgattcatattgaaagatcagttttagtcaatcatagttacaatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgat 303  Q
    ||||| ||| |||||||||||||  |  ||| ||||| || | ||||||||||||||||||| ||| ||||| |||| ||| ||||| ||||    ||||    
T  53508266 gtttggttcctattgaaagatcaaatccagttaatcacagattcaatcaatgatttggacgtcaactttgcacatccaaaagcatgagtattacaatgat 53508365  T
Q  304 ttagattttatcatattatttctaggcatttt 335  Q
    ||||||||||||||||||||| ||||||||||    
T  53508366 ttagattttatcatattatttgtaggcatttt 53508397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 205 - 323
Target Start/End: Original strand, 14859531 - 14859649
Alignment:
Q  205 tttgattcatattgaaagatcagttttagtcaatcatagttacaatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatt 304  Q
    |||| |||||||||||||||||| || | ||||||| |  | ||||||||||||||||||| ||| ||||| ||||  || ||||  ||||||||| |||    
T  14859531 tttggttcatattgaaagatcagcttcaatcaatcacatattcaatcaatgatttggacgtcaacgttgcagatccagaagcatgggtattttggtaatt 14859630  T
Q  305 tagattttatcatattatt 323  Q
    ||||||||||| |||||||    
T  14859631 tagattttatcgtattatt 14859649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 247 - 335
Target Start/End: Original strand, 21313119 - 21313207
Alignment:
Q  247 caatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    ||||||||||||||||||| ||| | ||| ||| |||| ||||| ||||| ||||| ||||||||||||||||||||| ||| ||||||    
T  21313119 caatcaatgatttggacgtcaacgtagcatatctgaaatcatgagtatttcggtgacttagattttatcatattatttgtagccatttt 21313207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 247 - 335
Target Start/End: Complemental strand, 23799915 - 23799827
Alignment:
Q  247 caatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    ||||||||||||| | ||| ||| ||||| |||||||||||||| |||||   ||| ||||||||||||||||||||| ||||||||||    
T  23799915 caatcaatgatttcggcgtcaacgttgcagatccgaaaacatgagtatttcaatgacttagattttatcatattatttgtaggcatttt 23799827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 248 - 336
Target Start/End: Original strand, 38142609 - 38142697
Alignment:
Q  248 aatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttta 336  Q
    ||||||||| ||| |||| |||||||||||| | ||||||| | |||| || |||||||||| |||||||||||||| |||||||||||    
T  38142609 aatcaatgacttgaacgtcaacattgcaaatacaaaaacattagtattctgatgatttagatcttatcatattatttgtaggcatttta 38142697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 247 - 335
Target Start/End: Original strand, 42460832 - 42460920
Alignment:
Q  247 caatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    ||||||||||||||| ||| ||| ||||| || |  || |||||| ||| |||||||||||||||||||||||||||| ||||||||||    
T  42460832 caatcaatgatttgggcgtcaacgttgcagatacagaagcatgaacattctggtgatttagattttatcatattatttgtaggcatttt 42460920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 204 - 335
Target Start/End: Original strand, 7546655 - 7546786
Alignment:
Q  204 gtttgattcatattgaaagatcagttttagtcaatcatagttacaatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgat 303  Q
    ||||| ||| ||||||||||||||||| || |||||| |  | || |||||||||||  ||| ||| ||||  |||| ||| ||||  |||| |||||||    
T  7546655 gtttggttcgtattgaaagatcagtttcagacaatcacaaattcagtcaatgatttgagcgtcaacgttgccgatccaaaagcatgggtattctggtgat 7546754  T
Q  304 ttagattttatcatattatttctaggcatttt 335  Q
    |||||||| |||||||||||| ||||||||||    
T  7546755 ttagatttcatcatattatttgtaggcatttt 7546786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 204 - 335
Target Start/End: Original strand, 16235466 - 16235597
Alignment:
Q  204 gtttgattcatattgaaagatcagttttagtcaatcatagttacaatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgat 303  Q
    ||||| ||| ||||||||||| |||||||| |||||| |  | ||||||||||||||| ||| ||| ||||| |||   || ||||  |||| |||||||    
T  16235466 gtttggttcgtattgaaagattagttttagacaatcacaaattcaatcaatgatttgggcgtcaacgttgcagatcaagaagcatgggtattctggtgat 16235565  T
Q  304 ttagattttatcatattatttctaggcatttt 335  Q
    |||||||| ||||||||| || ||||||||||    
T  16235566 ttagatttcatcatattacttgtaggcatttt 16235597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 214 - 335
Target Start/End: Complemental strand, 51303681 - 51303560
Alignment:
Q  214 tattgaaagatcagttttagtcaatcatagttacaatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagatttta 313  Q
    |||||||||||||| ||  | |||||| |  | ||||||||||||||| ||| ||| ||||| ||||  || ||||  |||| ||||||||||||||| |    
T  51303681 tattgaaagatcagcttctgacaatcacaaattcaatcaatgatttgggcgtcaacgttgcagatccagaagcatgggtattctggtgatttagatttca 51303582  T
Q  314 tcatattatttctaggcatttt 335  Q
    ||||||||||| ||||||||||    
T  51303581 tcatattatttgtaggcatttt 51303560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 251 - 335
Target Start/End: Original strand, 10229563 - 10229647
Alignment:
Q  251 caatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    |||||||||||||| |||| ||||| |||| ||| ||||| ||||| ||||| |||  |||||||||||||||| ||||||||||    
T  10229563 caatgatttggacgataacgttgcagatccaaaagcatgattatttcggtgacttaagttttatcatattatttgtaggcatttt 10229647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 247 - 335
Target Start/End: Complemental strand, 26275824 - 26275736
Alignment:
Q  247 caatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    ||||||||||||| |  |||||| ||||| || ||||||||||| |||||  |||| ||| ||||||||||||||||| ||||||||||    
T  26275824 caatcaatgattttgttgttaacgttgcagattcgaaaacatgagtatttcagtgacttatattttatcatattatttgtaggcatttt 26275736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 251 - 335
Target Start/End: Original strand, 40487412 - 40487496
Alignment:
Q  251 caatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    ||||||||||||||| ||||||||| ||||| || |||   ||||| ||||| |||| |||||||||||||||| ||||||||||    
T  40487412 caatgatttggacgtcaacattgcagatccggaagcataggtatttcggtgacttaggttttatcatattatttgtaggcatttt 40487496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 251 - 335
Target Start/End: Original strand, 40556789 - 40556873
Alignment:
Q  251 caatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    ||||||||||||||| ||| ||| ||||||| || ||||  ||||||||||| |||  |||||||||||||||| ||||||||||    
T  40556789 caatgatttggacgtcaacgttgtaaatccggaagcatgtgtattttggtgacttaagttttatcatattatttgtaggcatttt 40556873  T

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Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 251 - 335
Target Start/End: Complemental strand, 43488591 - 43488507
Alignment:
Q  251 caatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    |||||||||| |||| ||| ||||| ||||| || ||||| ||||| |||||||||| |||||||||||||||| ||||| ||||    
T  43488591 caatgatttgaacgtcaacgttgcagatccggaagcatgagtatttcggtgatttaggttttatcatattatttttaggcttttt 43488507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 247 - 335
Target Start/End: Original strand, 44805113 - 44805200
Alignment:
Q  247 caatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    |||||||| |||||||| | ||| |||||||||||| | ||||  |||| |||||||||||||||||||||||| ||| ||||||||||    
T  44805113 caatcaataatttggac-tcaacgttgcaaatccgagagcatgggtattatggtgatttagattttatcatattgtttgtaggcatttt 44805200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 251 - 339
Target Start/End: Complemental strand, 52923118 - 52923030
Alignment:
Q  251 caatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcattttaccg 339  Q
    ||||||||||||||| ||| ||||| ||||| || ||||  ||||| ||||| |||  |||||||||||||||| ||||||||||||||    
T  52923118 caatgatttggacgtcaacgttgcagatccggaagcatgggtatttcggtgacttaagttttatcatattatttgtaggcattttaccg 52923030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 204 - 335
Target Start/End: Original strand, 8914752 - 8914883
Alignment:
Q  204 gtttgattcatattgaaagatcagttttagtcaatcatagttacaatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgat 303  Q
    ||||| ||| ||||||||||| || || || |||||| |  | ||||||||||||||| ||| ||| ||||| ||||  ||  |||  |||| |||||||    
T  8914752 gtttggttcgtattgaaagattagcttcagacaatcacaaattcaatcaatgatttgggcgtcaacgttgcagatccagaagaatgtgtattctggtgat 8914851  T
Q  304 ttagattttatcatattatttctaggcatttt 335  Q
    |||||||| |||||||||||| ||||||||||    
T  8914852 ttagatttcatcatattatttgtaggcatttt 8914883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 251 - 335
Target Start/End: Complemental strand, 38860115 - 38860029
Alignment:
Q  251 caatgatttggacgttaacattgcaaatccgaaaacatga--atattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    |||||| |||| ||| ||| ||||| |||||||||||||   |||||||||||| |||| |||||||||||||||| ||||||||||    
T  38860115 caatgacttggtcgtcaacgttgcagatccgaaaacatgggtatattttggtgacttaggttttatcatattatttgtaggcatttt 38860029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 247 - 334
Target Start/End: Original strand, 45424881 - 45424968
Alignment:
Q  247 caatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcattt 334  Q
    ||||||||||||||| ||| ||||||||| ||||| || ||||  || || ||||| || |||||||||||||||||| |||||||||    
T  45424881 caatcaatgatttgggcgtcaacattgcagatccggaatcatgggtacttcggtgacttcgattttatcatattatttgtaggcattt 45424968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 287 - 335
Target Start/End: Original strand, 9173871 - 9173919
Alignment:
Q  287 atgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    |||||||||||||| |||||||||| |||||||||||| ||||||||||    
T  9173871 atgaatattttggttatttagatttgatcatattatttgtaggcatttt 9173919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 251 - 335
Target Start/End: Complemental strand, 9797535 - 9797451
Alignment:
Q  251 caatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    |||||||||| |||||||| ||||| ||||| || ||||  |||||  ||||||||  |||||||||||||||| ||||||||||    
T  9797535 caatgatttgaacgttaacgttgcagatccggaagcatgggtatttaagtgatttatgttttatcatattatttgtaggcatttt 9797451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 251 - 335
Target Start/End: Original strand, 10233157 - 10233241
Alignment:
Q  251 caatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    ||||||||| |||| |||| ||||| ||||  |||||||| ||||| ||||| |||  |||||||||||||||| ||||||||||    
T  10233157 caatgatttagacgataacgttgcagatccagaaacatgagtatttcggtgacttaagttttatcatattatttgtaggcatttt 10233241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 291 - 335
Target Start/End: Original strand, 27856292 - 27856336
Alignment:
Q  291 atattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    ||||| |||||||||||||||||||||||||||| ||||||||||    
T  27856292 atattctggtgatttagattttatcatattatttgtaggcatttt 27856336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 251 - 335
Target Start/End: Original strand, 38545886 - 38545970
Alignment:
Q  251 caatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    ||||||||||| ||| ||| ||| | |||||||||||||   |||| ||||| |||| |||||||||||||||| ||||||||||    
T  38545886 caatgatttgggcgtcaacgttgaagatccgaaaacatgcgaatttaggtgacttaggttttatcatattatttgtaggcatttt 38545970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 299 - 339
Target Start/End: Original strand, 46220798 - 46220838
Alignment:
Q  299 gtgatttagattttatcatattatttctaggcattttaccg 339  Q
    |||||||||||||||||||||||||| ||||||||||||||    
T  46220798 gtgatttagattttatcatattatttgtaggcattttaccg 46220838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 283 - 335
Target Start/End: Original strand, 51487214 - 51487266
Alignment:
Q  283 aaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    |||||||| |||| |||||||||||||||||||||||||||| ||| ||||||    
T  51487214 aaacatgagtattctggtgatttagattttatcatattatttgtagacatttt 51487266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 204 - 335
Target Start/End: Original strand, 4821847 - 4821977
Alignment:
Q  204 gtttgattcatattgaaagatcagttttagtcaatcatagttacaatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgat 303  Q
    ||||| |||||||||||||||||| || ||||||||| |  | ||||| |||||||||||   ||| || |||||||| |  ||||  |||| |||||||    
T  4821847 gtttggttcatattgaaagatcagcttgagtcaatcacatattcaatccatgatttggacaccaacgttacaaatccggaggcatgggtattctggtgat 4821946  T
Q  304 ttagattttatcatattatttctaggcatttt 335  Q
    ||| |||| |||||||| ||| ||||||||||    
T  4821947 tta-atttcatcatattttttgtaggcatttt 4821977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 204 - 335
Target Start/End: Complemental strand, 21289862 - 21289731
Alignment:
Q  204 gtttgattcatattgaaagatcagttttagtcaatcatagttacaatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgat 303  Q
    ||||| ||| |||||||||||||| || || |||||| |  | ||||||||||||| |  || ||| ||||| |||   || |||| ||||| |||| ||    
T  21289862 gtttggttcgtattgaaagatcagcttcagacaatcacaaattcaatcaatgattttggtgtcaacgttgcagatctagaagcatggatattctggtaat 21289763  T
Q  304 ttagattttatcatattatttctaggcatttt 335  Q
    |||||||| |||||||||||| ||||||||||    
T  21289762 ttagatttcatcatattatttgtaggcatttt 21289731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 247 - 334
Target Start/End: Original strand, 45425675 - 45425762
Alignment:
Q  247 caatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcattt 334  Q
    ||||||||||||||| | | ||||||||| ||||| || ||| | ||||| ||||| || ||||||||||||||||||  ||||||||    
T  45425675 caatcaatgatttgggcttcaacattgcagatccggaaccataagtatttcggtgacttcgattttatcatattatttgcaggcattt 45425762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 204 - 306
Target Start/End: Original strand, 29239383 - 29239485
Alignment:
Q  204 gtttgattcatattgaaagatcagttttagtcaatcatagttacaatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgat 303  Q
    ||||| ||| ||||| |||||||| || ||||||||| || |  ||||||||||||||||||  || ||| | |||||||||||||  |||||||||| |    
T  29239383 gtttggttcgtattggaagatcagcttcagtcaatcacagatttaatcaatgatttggacgtcgacgttgtagatccgaaaacatggttattttggtggt 29239482  T
Q  304 tta 306  Q
    |||    
T  29239483 tta 29239485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 333
Target Start/End: Original strand, 54149078 - 54149160
Alignment:
Q  251 caatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatt 333  Q
    ||||||||||| ||| ||| ||||| ||||| || ||||  ||||| ||||| || |||||||||||||||||| ||||||||    
T  54149078 caatgatttgggcgtcaacgttgcagatccggaagcatggctatttcggtgacttggattttatcatattatttgtaggcatt 54149160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 251 - 340
Target Start/End: Complemental strand, 7448915 - 7448826
Alignment:
Q  251 caatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcattttaccgc 340  Q
    ||||||||||||||| ||| ||||| ||||| || ||||| ||||| ||||| |||  ||| |||||||||||| ||| |||||| ||||    
T  7448915 caatgatttggacgtcaacgttgcatatccggaagcatgagtatttcggtgacttaagtttcatcatattatttgtagacattttgccgc 7448826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 251 - 340
Target Start/End: Complemental strand, 7457057 - 7456968
Alignment:
Q  251 caatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcattttaccgc 340  Q
    ||||||||||||||| ||| ||||| ||||| || ||||| ||||| ||||| |||  ||| |||||||||||| ||| |||||| ||||    
T  7457057 caatgatttggacgtcaacgttgcatatccggaagcatgagtatttcggtgacttaagtttcatcatattatttgtagacattttgccgc 7456968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 335
Target Start/End: Complemental strand, 7792153 - 7792104
Alignment:
Q  286 catgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    ||||| |||| | |||||||||||||||||||||||||| ||||||||||    
T  7792153 catgagtattctagtgatttagattttatcatattatttgtaggcatttt 7792104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 335
Target Start/End: Complemental strand, 12050649 - 12050565
Alignment:
Q  251 caatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    |||||||||||  || ||| ||||| ||||| |||||||| ||||| || || |||| |||||||||||||||| || |||||||    
T  12050649 caatgatttgggtgtcaacgttgcagatccggaaacatgagtatttcggggacttaggttttatcatattatttgtaagcatttt 12050565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 280
Target Start/End: Complemental strand, 12947322 - 12947246
Alignment:
Q  204 gtttgattcatattgaaagatcagttttagtcaatcatagttacaatcaatgatttggacgttaacattgcaaatcc 280  Q
    ||||| |||||||||||| ||||  || |||||||||||| | ||||| ||||||||||||  ||||||||| ||||    
T  12947322 gtttggttcatattgaaatatcaacttcagtcaatcatagattcaatcgatgatttggacgccaacattgcagatcc 12947246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 335
Target Start/End: Original strand, 21431704 - 21431784
Alignment:
Q  255 gatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    ||||||||||| ||| ||||| ||||| || ||||  ||||| ||||| |||  |||||||||||||||| ||||||||||    
T  21431704 gatttggacgtcaacgttgcagatccggaagcatgggtatttcggtgacttaagttttatcatattatttgtaggcatttt 21431784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 335
Target Start/End: Complemental strand, 21533810 - 21533726
Alignment:
Q  251 caatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    |||| |||||| ||| ||| ||||| ||||| || ||||  ||||| ||||| |||| |||||||||||||||| ||||||||||    
T  21533810 caataatttgggcgtcaacgttgcagatccggaagcatgggtatttcggtgacttaggttttatcatattatttgtaggcatttt 21533726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 291 - 331
Target Start/End: Original strand, 32246550 - 32246590
Alignment:
Q  291 atattttggtgatttagattttatcatattatttctaggca 331  Q
    ||||| |||||||||||||||||||||||||||| ||||||    
T  32246550 atattctggtgatttagattttatcatattatttgtaggca 32246590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 335
Target Start/End: Complemental strand, 36461432 - 36461348
Alignment:
Q  251 caatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    ||||||||||||||| ||| || || ||| | || ||||| ||||| || ||||||| |||||||||||||||| ||| ||||||    
T  36461432 caatgatttggacgtcaacgttacagatctggaagcatgagtatttcggcgatttaggttttatcatattatttgtagccatttt 36461348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 335
Target Start/End: Complemental strand, 48650735 - 48650651
Alignment:
Q  251 caatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    |||| |||||||||| ||| ||||| ||| ||||  |||| ||||| ||||| |||  |||||||||||||||| ||||||||||    
T  48650735 caataatttggacgtcaacgttgcagatctgaaagaatgagtatttcggtgacttaagttttatcatattatttgtaggcatttt 48650651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 204 - 335
Target Start/End: Complemental strand, 27706274 - 27706143
Alignment:
Q  204 gtttgattcatattgaaagatcagttttagtcaatcatagttacaatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgat 303  Q
    ||||| ||| |||||||||||||| |||   |||||| |  | ||||||||||||| | ||| ||| ||||| ||||  || ||||  |||  |||| ||    
T  27706274 gtttggttcgtattgaaagatcagcttttaacaatcacaaattcaatcaatgatttcggcgtcaacgttgcatatccacaagcatgggtatcctggttat 27706175  T
Q  304 ttagattttatcatattatttctaggcatttt 335  Q
    |||||||| |||||||||||| ||||||||||    
T  27706174 ttagatttcatcatattatttgtaggcatttt 27706143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 248 - 335
Target Start/End: Original strand, 48199861 - 48199948
Alignment:
Q  248 aatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    ||||||||||||||||||  || ||||||||||  || ||||   |||| ||||| ||||| ||||||||||||| | ||||||||||    
T  48199861 aatcaatgatttggacgtcgacgttgcaaatccagaagcatgtgcatttcggtgacttagaatttatcatattatctgtaggcatttt 48199948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 293 - 335
Target Start/End: Original strand, 19619842 - 19619884
Alignment:
Q  293 attttggtgatttagattttatcatattatttctaggcatttt 335  Q
    |||| ||||| ||||||||||||||||||||| ||||||||||    
T  19619842 atttcggtgacttagattttatcatattatttgtaggcatttt 19619884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 293 - 335
Target Start/End: Original strand, 33580009 - 33580051
Alignment:
Q  293 attttggtgatttagattttatcatattatttctaggcatttt 335  Q
    |||| |||||||||| |||||||||||||||| ||||||||||    
T  33580009 atttcggtgatttaggttttatcatattatttgtaggcatttt 33580051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 332
Target Start/End: Complemental strand, 46304521 - 46304440
Alignment:
Q  251 caatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcat 332  Q
    ||||||||| | ||| ||||||||| ||||| || ||||  ||||| ||||| |||| |||||||||||||| | |||||||    
T  46304521 caatgatttaggcgtcaacattgcagatccggaagcatgggtatttcggtgacttaggttttatcatattatatgtaggcat 46304440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 335
Target Start/End: Complemental strand, 12946932 - 12946884
Alignment:
Q  287 atgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    |||| |||| ||||||||||||||| |||||||| ||| ||||||||||    
T  12946932 atgagtattctggtgatttagatttcatcatattttttgtaggcatttt 12946884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 247 - 275
Target Start/End: Complemental strand, 35864937 - 35864909
Alignment:
Q  247 caatcaatgatttggacgttaacattgca 275  Q
    |||||||||||||||||||||||||||||    
T  35864937 caatcaatgatttggacgttaacattgca 35864909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 247 - 335
Target Start/End: Original strand, 41818298 - 41818386
Alignment:
Q  247 caatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    |||||||||||||| | || ||  ||||| |||| |||||||   |||| ||||| ||| ||||||||| |||||||| ||||||||||    
T  41818298 caatcaatgatttgaatgtcaatgttgcagatccaaaaacattggtattatggtggttttgattttatcgtattatttgtaggcatttt 41818386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 247 - 335
Target Start/End: Complemental strand, 52116026 - 52115938
Alignment:
Q  247 caatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    |||||||||||||   ||| ||||||||| |||| ||| ||||  |||| |  ||||||||||| ||||||||||||| ||| ||||||    
T  52116026 caatcaatgatttaagcgtcaacattgcagatccaaaatcatgggtattctaatgatttagattgtatcatattatttgtagtcatttt 52115938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 58; Significance: 2e-24; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 210 - 335
Target Start/End: Original strand, 15344357 - 15344482
Alignment:
Q  210 ttcatattgaaagatcagttttagtcaatcatagttacaatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagat 309  Q
    |||||||||||||||||  || ||||||||| || | ||||||||||||||||||| ||| ||||| ||||  || || || |||| |||||||||||||    
T  15344357 ttcatattgaaagatcaagttcagtcaatcacagattcaatcaatgatttggacgtcaacgttgcagatccagaagcaagagtattctggtgatttagat 15344456  T
Q  310 tttatcatattatttctaggcatttt 335  Q
    | ||||||||||||| ||||||||||    
T  15344457 tatatcatattatttgtaggcatttt 15344482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 210 - 335
Target Start/End: Original strand, 15433422 - 15433547
Alignment:
Q  210 ttcatattgaaagatcagttttagtcaatcatagttacaatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagat 309  Q
    |||||||||||||||||  || ||||||||| || | ||||||||||||||||||| ||| ||||| ||||  || || || |||| |||||||||||||    
T  15433422 ttcatattgaaagatcaagttcagtcaatcacagattcaatcaatgatttggacgtcaacgttgcagatccagaagcaagagtattctggtgatttagat 15433521  T
Q  310 tttatcatattatttctaggcatttt 335  Q
    | ||||||||||||| ||||||||||    
T  15433522 tatatcatattatttgtaggcatttt 15433547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 210 - 335
Target Start/End: Original strand, 15524726 - 15524851
Alignment:
Q  210 ttcatattgaaagatcagttttagtcaatcatagttacaatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagat 309  Q
    |||||||||||||||||  || ||||||||| || | ||||||||||||||||||| ||| ||||| ||||  || || || |||| |||||||||||||    
T  15524726 ttcatattgaaagatcaagttcagtcaatcacagattcaatcaatgatttggacgtcaacgttgcagatccagaagcaagagtattctggtgatttagat 15524825  T
Q  310 tttatcatattatttctaggcatttt 335  Q
    | ||||||||||||| ||||||||||    
T  15524826 tatatcatattatttgtaggcatttt 15524851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 204 - 335
Target Start/End: Complemental strand, 29617320 - 29617189
Alignment:
Q  204 gtttgattcatattgaaagatcagttttagtcaatcatagttacaatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgat 303  Q
    ||||| ||| |||||||||| ||  || ||||||||| || | ||||||||||||||||||| ||| ||||| ||||  ||||||   |||| |||||||    
T  29617320 gtttggttcttattgaaagaccaacttcagtcaatcacagattcaatcaatgatttggacgtcaacgttgcagatccataaacattgttattctggtgat 29617221  T
Q  304 ttagattttatcatattatttctaggcatttt 335  Q
    ||||||||||||||||||||| ||||||||||    
T  29617220 ttagattttatcatattatttgtaggcatttt 29617189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 247 - 324
Target Start/End: Complemental strand, 7198198 - 7198121
Alignment:
Q  247 caatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattattt 324  Q
    |||||||||||||||| || ||| ||||| ||||| || |||||||||||||||||||||||||||||||||||||||    
T  7198198 caatcaatgatttggatgtcaacgttgcagatccggaagcatgaatattttggtgatttagattttatcatattattt 7198121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 204 - 335
Target Start/End: Complemental strand, 471212 - 471081
Alignment:
Q  204 gtttgattcatattgaaagatcagttttagtcaatcatagttacaatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgat 303  Q
    ||||| ||| |||||||||||||  || | |||||||||| | ||||||||||||||  ||| ||| ||||| ||||| || ||||  |||| || ||||    
T  471212 gtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgcagatccggaagcatgggtattctgatgat 471113  T
Q  304 ttagattttatcatattatttctaggcatttt 335  Q
    ||||||||||||||||||||| ||||||||||    
T  471112 ttagattttatcatattatttgtaggcatttt 471081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 204 - 335
Target Start/End: Complemental strand, 18890745 - 18890614
Alignment:
Q  204 gtttgattcatattgaaagatcagttttagtcaatcatagttacaatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgat 303  Q
    ||||| ||| |||||||||||||| || || |||||| |  | ||||||||||||||| ||| ||| ||||| ||||  ||||||   |||| |||||||    
T  18890745 gtttggttcgtattgaaagatcagcttcagacaatcacaaattcaatcaatgatttgggcgtcaacgttgcagatccagaaacataggtattatggtgat 18890646  T
Q  304 ttagattttatcatattatttctaggcatttt 335  Q
    ||||||||||||||||||||| ||||||||||    
T  18890645 ttagattttatcatattatttgtaggcatttt 18890614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 204 - 335
Target Start/End: Original strand, 39657497 - 39657628
Alignment:
Q  204 gtttgattcatattgaaagatcagttttagtcaatcatagttacaatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgat 303  Q
    ||||| ||| ||||||||||| || || || ||||||||  | ||||||||||||||||||| ||| ||||| ||||  || ||||  |||| |||||||    
T  39657497 gtttggttcgtattgaaagattagcttcagacaatcataaattcaatcaatgatttggacgtcaacgttgcagatccagaagcatgggtattctggtgat 39657596  T
Q  304 ttagattttatcatattatttctaggcatttt 335  Q
    |||||||| |||||||||||| ||||||||||    
T  39657597 ttagatttcatcatattatttgtaggcatttt 39657628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 204 - 335
Target Start/End: Complemental strand, 14916233 - 14916103
Alignment:
Q  204 gtttgattcatattgaaagatcagttttagtcaatcatagttacaatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgat 303  Q
    ||||| |||||||||||||| ||  || | ||||||| || | |||||||||||||||||||  |  ||||| ||||| || ||||||||||| | ||||    
T  14916233 gtttggttcatattgaaagaccaacttcaatcaatcagagattcaatcaatgatttggacgtccatgttgcagatccggaagcatgaatattt-gttgat 14916135  T
Q  304 ttagattttatcatattatttctaggcatttt 335  Q
    ||||||||||||||||| ||| ||||||||||    
T  14916134 ttagattttatcatattgtttgtaggcatttt 14916103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 210 - 335
Target Start/End: Complemental strand, 1236737 - 1236612
Alignment:
Q  210 ttcatattgaaagatcagttttagtcaatcatagttacaatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagat 309  Q
    |||||||||||||||||  || ||||||||| |  | ||||||||||| ||||||| ||| ||||| ||||  || || || |||| |||||||||||||    
T  1236737 ttcatattgaaagatcaacttcagtcaatcacatattcaatcaatgatctggacgtcaacgttgcagatccagaagcaagagtattctggtgatttagat 1236638  T
Q  310 tttatcatattatttctaggcatttt 335  Q
    | ||||||| ||||| ||||||||||    
T  1236637 tatatcatactatttttaggcatttt 1236612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 210 - 335
Target Start/End: Complemental strand, 1239437 - 1239312
Alignment:
Q  210 ttcatattgaaagatcagttttagtcaatcatagttacaatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagat 309  Q
    |||||||||||||||||  || ||||||||| |  | ||||||||||| ||||||| ||| ||||| ||||  || || || |||| |||||||||||||    
T  1239437 ttcatattgaaagatcaacttcagtcaatcacatattcaatcaatgatctggacgtcaacgttgcagatccagaagcaagagtattctggtgatttagat 1239338  T
Q  310 tttatcatattatttctaggcatttt 335  Q
    | ||||||| ||||| ||||||||||    
T  1239337 tatatcatactatttgtaggcatttt 1239312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 250 - 331
Target Start/End: Complemental strand, 24099250 - 24099169
Alignment:
Q  250 tcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggca 331  Q
    ||||||||||| |||| ||| ||||| ||||| ||  | |||||||||||||||||||||||||||||||||||| ||||||    
T  24099250 tcaatgatttgtacgtcaacgttgcagatccggaagaaagaatattttggtgatttagattttatcatattatttgtaggca 24099169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 251 - 335
Target Start/End: Complemental strand, 20553240 - 20553156
Alignment:
Q  251 caatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    ||||||||||||||| ||| ||||| ||||| || ||||| ||||| ||||| |||| |||||||||||||||| ||||||||||    
T  20553240 caatgatttggacgtcaacgttgcagatccggaagcatgagtatttcggtgacttaggttttatcatattatttgtaggcatttt 20553156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 251 - 335
Target Start/End: Original strand, 37971373 - 37971457
Alignment:
Q  251 caatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    ||||||||||||||| ||| ||||| ||||| |||||||| ||||| ||||| |||| |||||||| ||||||| ||||||||||    
T  37971373 caatgatttggacgtcaacgttgcagatccggaaacatgagtatttcggtgacttaggttttatcacattatttgtaggcatttt 37971457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 204 - 335
Target Start/End: Original strand, 42046264 - 42046395
Alignment:
Q  204 gtttgattcatattgaaagatcagttttagtcaatcatagttacaatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgat 303  Q
    ||||| ||| |||||||||||||| || || |||||| |  | ||||||||||||||| ||| ||  ||||| ||||  || ||||  |||| |||||||    
T  42046264 gtttggttcgtattgaaagatcagcttcagacaatcacaaattcaatcaatgatttgggcgtcaatgttgcagatccagaagcatgggtattctggtgat 42046363  T
Q  304 ttagattttatcatattatttctaggcatttt 335  Q
    |||||||| |||||||||||| ||||||||||    
T  42046364 ttagatttcatcatattatttgtaggcatttt 42046395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 204 - 336
Target Start/End: Original strand, 5046796 - 5046928
Alignment:
Q  204 gtttgattcatattgaaagatcagttttagtcaatcatagttacaatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgat 303  Q
    ||||| ||| |||||||| ||||  || ||||||| | || | |||||||| ||||||||||  || ||||| || |  ||||||||||||||  ||||     
T  5046796 gtttggttcctattgaaaaatcaaattcagtcaattacagattcaatcaataatttggacgtcgacgttgcagattcataaacatgaatatttcagtgac 5046895  T
Q  304 ttagattttatcatattatttctaggcatttta 336  Q
    ||||| ||||||||||||||| |||||||||||    
T  5046896 ttagaatttatcatattatttgtaggcatttta 5046928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 251 - 335
Target Start/End: Complemental strand, 20559743 - 20559659
Alignment:
Q  251 caatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    ||||||||||||||| ||| ||||| ||||| || ||||| ||||| ||||| |||| |||||||||||||||| | ||||||||    
T  20559743 caatgatttggacgtcaacgttgcagatccggaagcatgagtatttcggtgacttaggttttatcatattatttgtgggcatttt 20559659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 251 - 335
Target Start/End: Complemental strand, 20571305 - 20571221
Alignment:
Q  251 caatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    ||||||||||||||| ||| ||||| ||||| || ||||| ||||| ||||| |||| |||||||||||||||| | ||||||||    
T  20571305 caatgatttggacgtcaacgttgcagatccggaagcatgagtatttcggtgacttaggttttatcatattatttgtgggcatttt 20571221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 247 - 335
Target Start/End: Original strand, 34609922 - 34610010
Alignment:
Q  247 caatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    ||||||||||||||| ||| ||| ||||| || ||| ||||||| ||||  |||||||||| |||||||||||||||  ||||||||||    
T  34609922 caatcaatgatttgggcgtgaacgttgcagattcgagaacatgagtattccggtgatttaggttttatcatattattaataggcatttt 34610010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 247 - 335
Target Start/End: Complemental strand, 43833999 - 43833911
Alignment:
Q  247 caatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    ||||||||||||| ||||| ||| ||||| |||   || ||||| |||| ||||||||||| |||||||||||||||| ||||||||||    
T  43833999 caatcaatgatttagacgtcaacgttgcagatctagaagcatgagtattctggtgatttagtttttatcatattatttgtaggcatttt 43833911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 251 - 335
Target Start/End: Complemental strand, 45445810 - 45445726
Alignment:
Q  251 caatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    ||||||||||| ||| ||| ||| ||||||| || ||||   |||||||||| ||||||||||||||||||||| ||||||||||    
T  45445810 caatgatttgggcgtcaacgttgaaaatccggaagcatgtgaattttggtgacttagattttatcatattatttgtaggcatttt 45445726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 247 - 335
Target Start/End: Complemental strand, 28086816 - 28086727
Alignment:
Q  247 caatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgattt-agattttatcatattatttctaggcatttt 335  Q
    |||||||||||||||| || ||| ||||| ||||| ||||||   |||||  ||||||| ||||||||||||||||||| ||||||||||    
T  28086816 caatcaatgatttggaagtcaacgttgcagatccgtaaacattggtatttcagtgattttagattttatcatattatttgtaggcatttt 28086727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 214 - 335
Target Start/End: Complemental strand, 33347557 - 33347436
Alignment:
Q  214 tattgaaagatcagttttagtcaatcatagttacaatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagatttta 313  Q
    |||||||||||||  || ||||||||| || | ||||||||||||| | |||  || ||||  |||||||| ||||  ||||| ||||| | ||| ||||    
T  33347557 tattgaaagatcaacttcagtcaatcacagattcaatcaatgatttaggcgtcgacgttgcggatccgaaagcatgggtatttcggtgactcagaattta 33347458  T
Q  314 tcatattatttctaggcatttt 335  Q
    ||||||||||| ||||||||||    
T  33347457 tcatattatttgtaggcatttt 33347436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 251 - 335
Target Start/End: Complemental strand, 7677282 - 7677198
Alignment:
Q  251 caatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    ||||||||||  ||| ||| ||||| ||||| || ||||||||||| ||||| |||| |||||||||||||||| || |||||||    
T  7677282 caatgatttgagcgtcaacgttgcagatccggaagcatgaatatttcggtgacttaggttttatcatattatttgtaagcatttt 7677198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 291 - 335
Target Start/End: Original strand, 8867935 - 8867979
Alignment:
Q  291 atattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    ||||| |||||||||||||||||||||||||||| ||||||||||    
T  8867935 atattctggtgatttagattttatcatattatttgtaggcatttt 8867979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 251 - 335
Target Start/End: Complemental strand, 16928756 - 16928672
Alignment:
Q  251 caatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    ||||||||||||| | ||| ||||| |||||||| | ||  ||||| ||||| |||| |||||||||||||||| ||||||||||    
T  16928756 caatgatttggacatcaacgttgcagatccgaaagcgtgggtatttcggtgacttaggttttatcatattatttgtaggcatttt 16928672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 251 - 335
Target Start/End: Complemental strand, 17693613 - 17693529
Alignment:
Q  251 caatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    ||||||||||| ||| ||||||||| ||||| || ||||| ||||| | ||| |||  |||||||||||||||| ||||||||||    
T  17693613 caatgatttgggcgtcaacattgcagatccggaagcatgagtatttcgatgacttatgttttatcatattatttgtaggcatttt 17693529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 283 - 335
Target Start/End: Complemental strand, 18846433 - 18846381
Alignment:
Q  283 aaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    |||||||| |||| |||||||||||||||||| ||||||||| ||||||||||    
T  18846433 aaacatgagtattatggtgatttagattttattatattatttgtaggcatttt 18846381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 247 - 335
Target Start/End: Complemental strand, 24186664 - 24186576
Alignment:
Q  247 caatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    |||||||| |||||| ||| ||| ||||| |||||||| ||||  |||||  |||| ||| ||||||||||||||||| ||||||||||    
T  24186664 caatcaataatttgggcgtcaacgttgcagatccgaaagcatgggtatttcagtgacttaaattttatcatattatttataggcatttt 24186576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 204 - 335
Target Start/End: Original strand, 5333472 - 5333603
Alignment:
Q  204 gtttgattcatattgaaagatcagttttagtcaatcatagttacaatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgat 303  Q
    ||||| ||| |||||||||||||  || ||||||||| |  | |||||||| |||||| ||| ||| ||| | ||||  || ||||| |||| | |||||    
T  5333472 gtttggttcctattgaaagatcaacttcagtcaatcacatattcaatcaattatttgggcgtcaacgttgtagatccagaagcatgagtattctagtgat 5333571  T
Q  304 ttagattttatcatattatttctaggcatttt 335  Q
    ||||||||| ||||||||||| || |||||||    
T  5333572 ttagattttgtcatattatttgtatgcatttt 5333603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 204 - 335
Target Start/End: Original strand, 14585720 - 14585851
Alignment:
Q  204 gtttgattcatattgaaagatcagttttagtcaatcatagttacaatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgat 303  Q
    ||||| ||| |||||||| ||||| || || |||||| |  | |||||| |||||||||||| ||| ||||| ||||  || ||||  |||  |||||||    
T  14585720 gtttggttcgtattgaaatatcagcttcagacaatcacaaattcaatcattgatttggacgtcaacgttgcagatccagaagcatgggtatcctggtgat 14585819  T
Q  304 ttagattttatcatattatttctaggcatttt 335  Q
    |||||||| |||||||||||| ||||| ||||    
T  14585820 ttagatttcatcatattatttgtaggcgtttt 14585851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 204 - 335
Target Start/End: Original strand, 41896560 - 41896691
Alignment:
Q  204 gtttgattcatattgaaagatcagttttagtcaatcatagttacaatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgat 303  Q
    ||||| ||| |||||||||||||| || || |||||| |  | |||| |||||||| | | | ||| ||||| |||   || ||||| |||| |||||||    
T  41896560 gtttggttcgtattgaaagatcagcttcagacaatcacaaattcaattaatgatttaggcatcaacgttgcagatctagaagcatgagtattctggtgat 41896659  T
Q  304 ttagattttatcatattatttctaggcatttt 335  Q
    |||||||| |||||||||||| ||||||||||    
T  41896660 ttagatttcatcatattatttgtaggcatttt 41896691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 216 - 334
Target Start/End: Complemental strand, 8443545 - 8443427
Alignment:
Q  216 ttgaaagatcagttttagtcaatcatagttacaatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatc 315  Q
    |||||||||||  || ||||||||| |  | ||||||||||||||||| | ||| ||||| ||||| || ||    |||| ||||||||||||||| |||    
T  8443545 ttgaaagatcaacttcagtcaatcacatattcaatcaatgatttggacatcaacgttgcagatccggaagcactggtattatggtgatttagatttgatc 8443446  T
Q  316 atattatttctaggcattt 334  Q
    ||||||||| ||| |||||    
T  8443445 atattatttgtagacattt 8443427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 246 - 335
Target Start/End: Complemental strand, 9637413 - 9637324
Alignment:
Q  246 acaatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    ||||| |||||||||  ||| ||| ||||| || || |||||||| ||||| ||| | |||| |||||||||||||||| ||||||||||    
T  9637413 acaattaatgatttgagcgtcaacgttgcagattcggaaacatgagtatttcggtaacttaggttttatcatattatttttaggcatttt 9637324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 214 - 335
Target Start/End: Complemental strand, 26469182 - 26469061
Alignment:
Q  214 tattgaaagatcagttttagtcaatcatagttacaatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagatttta 313  Q
    |||||||||||||  |||||| ||||  |  | ||||||||||||||| ||| ||| |||   ||| |||  ||||  |||| |||||||||||||||||    
T  26469182 tattgaaagatcaagtttagttaatcgcatattcaatcaatgatttgggcgtcaacgttgtgcatctgaatgcatgtgtattctggtgatttagatttta 26469083  T
Q  314 tcatattatttctaggcatttt 335  Q
    ||||||||||| |||| |||||    
T  26469082 tcatattatttgtaggtatttt 26469061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 247 - 336
Target Start/End: Complemental strand, 27110468 - 27110379
Alignment:
Q  247 caatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttta 336  Q
    ||||||||||||||  ||| ||| ||||| ||| | || ||||  |||||| |||| ||||||||||||||||||||| ||| |||||||    
T  27110468 caatcaatgatttgagcgtcaacgttgcagatctggaagcatgtgtattttagtgacttagattttatcatattatttgtagacatttta 27110379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 335
Target Start/End: Complemental strand, 7883240 - 7883156
Alignment:
Q  251 caatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    |||| |||||||||| | | ||||| ||||| || ||||  ||||| ||||| |||| |||||||||||||||| ||||||||||    
T  7883240 caataatttggacgtcagcgttgcagatccggaagcatgggtatttcggtgacttaggttttatcatattatttgtaggcatttt 7883156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 335
Target Start/End: Original strand, 23230733 - 23230817
Alignment:
Q  251 caatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    |||||| |||| ||| ||| ||||| ||||| || ||||  ||||| ||||| |||| |||||||||||||||| ||||||||||    
T  23230733 caatgacttgggcgtcaacgttgcagatccggaagcatgggtatttcggtgacttaggttttatcatattatttgtaggcatttt 23230817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 247 - 335
Target Start/End: Complemental strand, 27498368 - 27498281
Alignment:
Q  247 caatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    |||| |||||||||| ||| ||||||||| ||  | |||||||  |||||  |||||||||||||||||||||||||| ||| ||||||    
T  27498368 caattaatgatttgggcgtcaacattgcagatttggaaacatgg-tatttcagtgatttagattttatcatattatttatagacatttt 27498281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 335
Target Start/End: Original strand, 29939390 - 29939474
Alignment:
Q  251 caatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    ||||||||||| ||||||| ||||| ||||  || ||||| |||||  |||| |||| |||||||||||||||| ||| ||||||    
T  29939390 caatgatttgggcgttaacgttgcatatccataagcatgagtatttcagtgacttaggttttatcatattatttgtagtcatttt 29939474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 247 - 335
Target Start/End: Complemental strand, 31013611 - 31013523
Alignment:
Q  247 caatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    ||||||||||||||||||| ||| ||||| || || || ||||  |||||  |||| |||  |||||||||||||||| ||||||||||    
T  31013611 caatcaatgatttggacgtcaacgttgcagattcggaagcatgtgtatttcagtgacttaagttttatcatattatttgtaggcatttt 31013523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 278 - 337
Target Start/End: Original strand, 41684499 - 41684558
Alignment:
Q  278 tccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcattttac 337  Q
    ||||||| ||||  ||||| | ||| ||||||||||||||||||||| ||||||||||||    
T  41684499 tccgaaagcatgggtatttcgatgacttagattttatcatattatttgtaggcattttac 41684558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 317
Target Start/End: Original strand, 21237833 - 21237946
Alignment:
Q  204 gtttgattcatattgaaagatcagttttagtcaatcatagttacaatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgat 303  Q
    ||||| |||||||||||||| |||||| | ||||||  |  | ||||||||||||||||||| ||  ||||| ||||  || ||||  || | || ||||    
T  21237833 gtttggttcatattgaaagaccagtttcaatcaatcccatattcaatcaatgatttggacgtcaatgttgcagatccagaagcatgtgtactctgttgat 21237932  T
Q  304 ttagattttatcat 317  Q
    ||||||||||||||    
T  21237933 ttagattttatcat 21237946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 335
Target Start/End: Original strand, 10377779 - 10377863
Alignment:
Q  251 caatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    ||||||||||||| | ||| ||||| ||||| || ||||  ||||| || || |||  |||||||||||||||| ||||||||||    
T  10377779 caatgatttggacatcaacgttgcagatccggaagcatgggtatttcggcgacttaagttttatcatattatttgtaggcatttt 10377863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 335
Target Start/End: Original strand, 34493128 - 34493176
Alignment:
Q  287 atgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    |||| ||||||||||| ||||||||||| ||||||| | ||||||||||    
T  34493128 atgagtattttggtgaattagattttatgatattatatataggcatttt 34493176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 57; Significance: 9e-24; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 204 - 336
Target Start/End: Complemental strand, 24069442 - 24069310
Alignment:
Q  204 gtttgattcatattgaaagatcagttttagtcaatcatagttacaatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgat 303  Q
    |||||||||||||||||| ||||| ||   ||||||| || | |||||||||||||| |||| ||| ||||| | ||| || |||||  ||| |||||||    
T  24069442 gtttgattcatattgaaatatcagcttcgatcaatcacaggttcaatcaatgatttgaacgtcaacgttgcagacccggaagcatgaggattctggtgat 24069343  T
Q  304 ttagattttatcatattatttctaggcatttta 336  Q
    ||||||||||||||||||||| |||||||||||    
T  24069342 ttagattttatcatattatttgtaggcatttta 24069310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 204 - 324
Target Start/End: Complemental strand, 41553482 - 41553362
Alignment:
Q  204 gtttgattcatattgaaagatcagttttagtcaatcatagttacaatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgat 303  Q
    ||||| ||||||||||||||||| ||| ||||||||| |  | || | |||||||||||||| ||| ||||| ||||| ||||||  |||||||||||||    
T  41553482 gtttggttcatattgaaagatcaatttcagtcaatcacatattcagttaatgatttggacgtcaacgttgcagatccggaaacatagatattttggtgat 41553383  T
Q  304 ttagattttatcatattattt 324  Q
    |||||||||||||||| ||||    
T  41553382 ttagattttatcatatcattt 41553362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 204 - 335
Target Start/End: Original strand, 35132990 - 35133121
Alignment:
Q  204 gtttgattcatattgaaagatcagttttagtcaatcatagttacaatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgat 303  Q
    ||||| ||| |||||||||||||  || || |||||| |  | ||||||||||||||| ||| ||| ||||| |||| ||| ||||| |||| | |||||    
T  35132990 gtttggttcgtattgaaagatcaacttcagacaatcacaaattcaatcaatgatttgggcgtcaacgttgcagatccaaaagcatgagtattctagtgat 35133089  T
Q  304 ttagattttatcatattatttctaggcatttt 335  Q
    |||||||| |||||||||||||||||||||||    
T  35133090 ttagatttcatcatattatttctaggcatttt 35133121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 247 - 324
Target Start/End: Complemental strand, 5078419 - 5078342
Alignment:
Q  247 caatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattattt 324  Q
    |||| |||||||||||||| ||| ||||| |||||||| ||||| ||||||| ||||||||||||||||||| |||||    
T  5078419 caataaatgatttggacgtcaactttgcatatccgaaagcatgagtattttgatgatttagattttatcatactattt 5078342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 251 - 335
Target Start/End: Complemental strand, 9450138 - 9450054
Alignment:
Q  251 caatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    ||||||||||||||| ||| ||||| ||||| || ||||  |||||| ||||||||| |||||||||||||||| ||||||||||    
T  9450138 caatgatttggacgtcaacgttgcagatccggaagcatgggtattttagtgatttaggttttatcatattatttgtaggcatttt 9450054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 192 - 335
Target Start/End: Original strand, 22742974 - 22743118
Alignment:
Q  192 ttgtgcgacgtt-gtttgattcatattgaaagatcagttttagtcaatcatagttacaatcaatgatttggacgttaacattgcaaatccgaaaacatga 290  Q
    ||||||| |||| ||||| ||| |||||||||||||| || || |||||| |  | ||||||||||||||  ||| ||| ||||| ||||  || |||||    
T  22742974 ttgtgcggcgttcgtttggttcgtattgaaagatcagcttcagccaatcacaaattcaatcaatgatttgagcgtcaacgttgcagatccagaagcatga 22743073  T
Q  291 atattttggtgatttagattttatcatattatttctaggcatttt 335  Q
     |||| ||||||||||||||| |||||||||||| | ||||||||    
T  22743074 gtattctggtgatttagatttcatcatattatttgttggcatttt 22743118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 204 - 335
Target Start/End: Complemental strand, 35665183 - 35665052
Alignment:
Q  204 gtttgattcatattgaaagatcagttttagtcaatcatagttacaatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgat 303  Q
    ||||||||||||| |||||||||  || |||| |||| || | |||||||||||||| |||| ||  ||||| | ||  || ||||  |||||| |||||    
T  35665183 gtttgattcatatcgaaagatcaacttcagtcgatcagagattcaatcaatgatttgaacgtcaatgttgcagacccataagcatgtgtattttagtgat 35665084  T
Q  304 ttagattttatcatattatttctaggcatttt 335  Q
    ||||||||||||||||||||| | ||||||||    
T  35665083 ttagattttatcatattattttttggcatttt 35665052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 202 - 335
Target Start/End: Original strand, 11343851 - 11343983
Alignment:
Q  202 ttgtttgattcatattgaaagatcagttttagtcaatcatagttacaatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtg 301  Q
    ||||||| ||||||||||||||| |  || ||||||| | |  |  ||| |||||||||||||| ||| ||||| ||||||||| |||| ||||||||||    
T  11343851 ttgtttggttcatattgaaagattaaattcagtcaattacaaatttaattaatgatttggacgtcaacgttgcagatccgaaaa-atgagtattttggtg 11343949  T
Q  302 atttagattttatcatattatttctaggcatttt 335  Q
    ||||| ||||||  ||||||||| |||| |||||    
T  11343950 atttatattttacaatattatttgtaggtatttt 11343983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 248 - 340
Target Start/End: Complemental strand, 3267221 - 3267129
Alignment:
Q  248 aatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcattttaccgc 340  Q
    |||||||||||| | ||| ||||||||| |||||||| |||| | |||| ||||| ||| ||||||||||| ||||| ||||||| |||||||    
T  3267221 aatcaatgatttaggcgtcaacattgcacatccgaaagcatggagatttcggtgacttatattttatcatactatttttaggcatgttaccgc 3267129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 251 - 335
Target Start/End: Complemental strand, 8001547 - 8001463
Alignment:
Q  251 caatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    ||||||||||||||| ||| ||||| || || || ||||| ||||| ||||| |||| |||||||||||||||| ||||||||||    
T  8001547 caatgatttggacgtcaacgttgcagattcggaatcatgagtatttcggtgacttaggttttatcatattatttataggcatttt 8001463  T

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Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 251 - 335
Target Start/End: Complemental strand, 12141309 - 12141225
Alignment:
Q  251 caatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    ||||||||||||||| ||| ||||| ||||| || ||||  ||||| ||||| ||||||||||||||||||||| || |||||||    
T  12141309 caatgatttggacgtcaacgttgcagatccggaagcatgggtatttcggtgacttagattttatcatattatttgtatgcatttt 12141225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 251 - 335
Target Start/End: Complemental strand, 39171591 - 39171507
Alignment:
Q  251 caatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    ||||||||||||||| ||| ||||| ||||| || ||||  ||||| ||||| |||| |||||||||||||||| ||||||||||    
T  39171591 caatgatttggacgtcaacgttgcagatccggaagcatgggtatttcggtgacttaggttttatcatattatttgtaggcatttt 39171507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 247 - 335
Target Start/End: Original strand, 46700121 - 46700209
Alignment:
Q  247 caatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    ||||||||||||||| | | | | ||||| ||||| || |||| |||||| ||||| ||||||||||||||||||||| ||||||||||    
T  46700121 caatcaatgatttgggcatcagcgttgcagatccggaagcatggatatttcggtgacttagattttatcatattatttataggcatttt 46700209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 204 - 339
Target Start/End: Complemental strand, 5348640 - 5348505
Alignment:
Q  204 gtttgattcatattgaaagatcagttttagtcaatcatagttacaatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgat 303  Q
    ||||| ||| ||||||||||||| ||| | ||||| | || | ||||||||||||||| |||  || ||||| || |||||| |||  |||||  ||||     
T  5348640 gtttggttcctattgaaagatcaatttcaatcaattacagattcaatcaatgatttgggcgtcgacgttgcagattcgaaaatatgtgtatttcagtgac 5348541  T
Q  304 ttagattttatcatattatttctaggcattttaccg 339  Q
    ||||| |||| |||||||||| ||||||||||||||    
T  5348540 ttagaatttaccatattatttgtaggcattttaccg 5348505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 205 - 335
Target Start/End: Complemental strand, 5000076 - 4999946
Alignment:
Q  205 tttgattcatattgaaagatcagttttagtcaatcatagttacaatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatt 304  Q
    |||| |||||||| ||| |||| ||| ||||||| | |  | |||||||| |||||||| | ||| ||||  ||| | || |||||||||| ||||||||    
T  5000076 tttggttcatattaaaatatcaatttcagtcaattacaaattcaatcaattatttggacttcaacgttgctgatctggaagcatgaatattctggtgatt 4999977  T
Q  305 tagattttatcatattatttctaggcatttt 335  Q
    || ||||||||||||||||| ||| ||||||    
T  4999976 taaattttatcatattatttatagacatttt 4999946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 254 - 335
Target Start/End: Complemental strand, 28044754 - 28044673
Alignment:
Q  254 tgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    ||||||| |||| ||| ||||| ||||| |||||||  ||||| |||||||||| |||||||||||||||| ||| ||||||    
T  28044754 tgatttgaacgtcaacgttgcagatccggaaacatgggtatttcggtgatttaggttttatcatattatttttagacatttt 28044673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 299 - 339
Target Start/End: Original strand, 3398328 - 3398368
Alignment:
Q  299 gtgatttagattttatcatattatttctaggcattttaccg 339  Q
    |||||||||||||||||||||||||| ||||||||||||||    
T  3398328 gtgatttagattttatcatattatttttaggcattttaccg 3398368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 247 - 335
Target Start/End: Complemental strand, 19404762 - 19404674
Alignment:
Q  247 caatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    ||||||||||||||| ||| ||  ||||| ||||| || ||||| |||||  |||| ||||||||||||||||||||| ||||| ||||    
T  19404762 caatcaatgatttgggcgtcaatgttgcagatccggaagcatgagtatttcagtgacttagattttatcatattatttgtaggcttttt 19404674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 247 - 335
Target Start/End: Complemental strand, 25287191 - 25287103
Alignment:
Q  247 caatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    ||||||||||||||  ||| || ||| || ||| |||| |||| |||||| ||||| ||||||||||||||||||||| ||| ||||||    
T  25287191 caatcaatgatttgagcgtcaatattacagatctgaaagcatggatatttcggtgacttagattttatcatattatttgtagccatttt 25287103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 251 - 335
Target Start/End: Original strand, 38798871 - 38798955
Alignment:
Q  251 caatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    ||||||||||| ||| ||||||| | ||||| || ||||   |||| ||||| ||||||||||||||||||||| ||||||||||    
T  38798871 caatgatttgggcgtcaacattgaagatccggaagcatgtgaatttcggtgacttagattttatcatattatttgtaggcatttt 38798955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 251 - 335
Target Start/End: Original strand, 47590401 - 47590485
Alignment:
Q  251 caatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    ||||||||||| ||| ||| ||||| ||||| || ||||| ||||| || || |||| |||||||||||||||| ||||||||||    
T  47590401 caatgatttgggcgtcaacgttgcacatccggaagcatgagtatttcggcgacttaggttttatcatattatttgtaggcatttt 47590485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 251 - 335
Target Start/End: Complemental strand, 48316813 - 48316729
Alignment:
Q  251 caatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    ||||||||||||||| |||  |||| ||||| || ||||  ||||| || ||||||| |||||||||||||||| ||||||||||    
T  48316813 caatgatttggacgtcaacgctgcagatccggaagcatgggtatttcggcgatttaggttttatcatattatttgtaggcatttt 48316729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 204 - 335
Target Start/End: Original strand, 28476270 - 28476400
Alignment:
Q  204 gtttgattcatattgaaagatcagttttagtcaatcatagttacaatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgat 303  Q
    ||||| ||| |||||||||||||| || || |||||| |  | || |||||||||||| ||| ||| ||||| ||||  ||  |||  ||||  ||||||    
T  28476270 gtttggttcgtattgaaagatcagcttcagacaatcacaaattcattcaatgatttgggcgtcaacgttgcagatccagaagtatgggtattc-ggtgat 28476368  T
Q  304 ttagattttatcatattatttctaggcatttt 335  Q
    ||||||||||||||||||||| ||||||||||    
T  28476369 ttagattttatcatattatttgtaggcatttt 28476400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 250 - 296
Target Start/End: Complemental strand, 21609603 - 21609557
Alignment:
Q  250 tcaatgatttggacgttaacattgcaaatccgaaaacatgaatattt 296  Q
    ||||||||||| |||||||||||||||||| ||| ||||||||||||    
T  21609603 tcaatgatttgaacgttaacattgcaaatctgaagacatgaatattt 21609557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 48061547 - 48061596
Alignment:
Q  286 catgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    ||||| ||||| |||||||||| |||||||||||||||| ||||||||||    
T  48061547 catgagtatttcggtgatttaggttttatcatattatttgtaggcatttt 48061596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 335
Target Start/End: Complemental strand, 13796930 - 13796846
Alignment:
Q  251 caatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    ||||||||||  ||| ||| ||||| ||||| || ||||| ||||| ||||| |||  |||||||||||||||| ||||||||||    
T  13796930 caatgatttgaccgtcaacgttgcagatccggaagcatgagtatttaggtgacttaagttttatcatattatttgtaggcatttt 13796846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 335
Target Start/End: Original strand, 19296960 - 19297044
Alignment:
Q  251 caatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    ||||||||||||||| ||| ||||| ||||| || ||||  ||||| ||| | |||  |||||||||||||||| ||||||||||    
T  19296960 caatgatttggacgtcaacgttgcagatccggaagcatgggtatttcggtaacttaagttttatcatattatttgtaggcatttt 19297044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 335
Target Start/End: Complemental strand, 30756820 - 30756736
Alignment:
Q  251 caatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    |||| |||||||| | ||| ||||| ||||| || ||||| ||||| ||||| |||  |||||||||||||||| ||||||||||    
T  30756820 caataatttggacatcaacgttgcagatccggaagcatgagtatttcggtgacttaagttttatcatattatttataggcatttt 30756736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 335
Target Start/End: Complemental strand, 34899608 - 34899524
Alignment:
Q  251 caatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    ||||||||||||||| ||| |||||||| || || ||||  ||||| ||||| |||  |||||||||||||||| || |||||||    
T  34899608 caatgatttggacgtcaacgttgcaaattcggaagcatgggtatttcggtgacttaagttttatcatattatttgtatgcatttt 34899524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 335
Target Start/End: Complemental strand, 45349800 - 45349716
Alignment:
Q  251 caatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    ||||||||| | ||| ||||||||| ||| | || ||||   |||| |||||||||| |||||||||||||||| ||||||||||    
T  45349800 caatgattttggcgtcaacattgcagatctggaagcatgtgaatttcggtgatttaggttttatcatattatttgtaggcatttt 45349716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 204 - 318
Target Start/End: Complemental strand, 38880626 - 38880512
Alignment:
Q  204 gtttgattcatattgaaagatcagttttagtcaatcatagttacaatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgat 303  Q
    ||||| ||| |||||||||||||| || ||||||||| |  | |||||||||||||||  |  ||| ||||| ||| | || ||||  |||||| || ||    
T  38880626 gtttggttcttattgaaagatcagcttcagtcaatcacaaattcaatcaatgatttgggtgccaacgttgcagatctggaagcatgcgtattttagttat 38880527  T
Q  304 ttagattttatcata 318  Q
    |||||||||||||||    
T  38880526 ttagattttatcata 38880512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 335
Target Start/End: Original strand, 48930795 - 48930881
Alignment:
Q  249 atcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    |||||||||||||  || ||| ||||| ||||  ||||||   |||| ||||||||||||||| |||||||||||| | ||||||||    
T  48930795 atcaatgatttgggtgtcaacgttgcagatccagaaacattggtattctggtgatttagatttcatcatattatttgttggcatttt 48930881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 320
Target Start/End: Complemental strand, 969464 - 969391
Alignment:
Q  247 caatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatatt 320  Q
    |||| |||||||||||||| || |||||| || |  || ||||| |||| | ||||||||||||||||||||||    
T  969464 caattaatgatttggacgtcaatattgcagattcataagcatgagtattctagtgatttagattttatcatatt 969391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 210 - 315
Target Start/End: Complemental strand, 1769220 - 1769115
Alignment:
Q  210 ttcatattgaaagatcagttttagtcaatcatagttacaatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagat 309  Q
    |||||||||||| || |  || ||||||||| || | |||||||||||||| |||| ||| ||||| ||| | || ||||| |||| | || ||||||||    
T  1769220 ttcatattgaaaaattatcttcagtcaatcacagattcaatcaatgatttgaacgtgaacgttgcagatctggaagcatgagtattattgtaatttagat 1769121  T
Q  310 tttatc 315  Q
    ||||||    
T  1769120 tttatc 1769115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 321
Target Start/End: Complemental strand, 3224458 - 3224342
Alignment:
Q  204 gtttgattcatattgaaagatcagttttagtcaatcatagttacaatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgat 303  Q
    ||||| ||||||||||| |||||  || |||||||||  | | |||| |||||||| ||||| ||  ||| | ||||| ||  |||| |||| |||||||    
T  3224458 gtttggttcatattgaaggatcaacttcagtcaatcacggattcaattaatgattttgacgtcaag-ttgtagatccggaagaatgagtattatggtgat 3224360  T
Q  304 ttagattttatcatatta 321  Q
    ||||||||||||||||||    
T  3224359 ttagattttatcatatta 3224342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 324
Target Start/End: Complemental strand, 24350844 - 24350767
Alignment:
Q  247 caatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattattt 324  Q
    ||||||||||||||| ||| ||| ||||| ||||  || ||||  |||| |||||||||| |||| ||||||||||||    
T  24350844 caatcaatgatttgggcgtcaacgttgcagatccagaagcatgggtattctggtgatttaaatttcatcatattattt 24350767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 281
Target Start/End: Complemental strand, 41553827 - 41553750
Alignment:
Q  204 gtttgattcatattgaaagatcagttttagtcaatcatagttacaatcaatgatttggacgttaacattgcaaatccg 281  Q
    ||||| ||||||||||||||||| ||| ||||||||| |  | || | |||||||||||||| ||| ||||| |||||    
T  41553827 gtttggttcatattgaaagatcaatttcagtcaatcacatattcagttaatgatttggacgtcaacgttgcagatccg 41553750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 332
Target Start/End: Original strand, 5792883 - 5792967
Alignment:
Q  248 aatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcat 332  Q
    |||||||||||||||||| ||| ||||| ||| | || ||| |  |||| | ||| ||| ||||||||||||||||| |||||||    
T  5792883 aatcaatgatttggacgtcaacgttgcagatctggaagcataagaatttcgatgacttatattttatcatattatttataggcat 5792967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 335
Target Start/End: Complemental strand, 37837459 - 37837375
Alignment:
Q  251 caatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    ||||||||||| ||| ||| ||||| ||||| || ||||   |||| ||||| |||| ||||||||||||| || ||||||||||    
T  37837459 caatgatttgggcgtcaacgttgcagatccggaagcatgtgaatttcggtgacttaggttttatcatattacttgtaggcatttt 37837375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 335
Target Start/End: Original strand, 42978700 - 42978784
Alignment:
Q  251 caatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    ||||||||||| ||| ||| ||||| ||||| ||  |||  ||||| ||||| |||| |||||||||||||| | ||||||||||    
T  42978700 caatgatttgggcgtcaacgttgcagatccggaaggatgggtatttcggtgacttaggttttatcatattatatgtaggcatttt 42978784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 251 - 335
Target Start/End: Original strand, 15580 - 15664
Alignment:
Q  251 caatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    ||||||||||||||| ||||||||| ||||| || |||| |||||| ||||| |||| |||||||||||||||| ||||||||||    
T  15580 caatgatttggacgtcaacattgcagatccggaagcatggatatttcggtgacttaggttttatcatattatttgtaggcatttt 15664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 204 - 335
Target Start/End: Complemental strand, 92544 - 92413
Alignment:
Q  204 gtttgattcatattgaaagatcagttttagtcaatcatagttacaatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgat 303  Q
    ||||| ||||||||||||||||| ||||||| ||||| || | ||||||||||||||||||| ||| ||| | ||||  || ||||  |||| ||||  |    
T  92544 gtttggttcatattgaaagatcaattttagtaaatcacagattcaatcaatgatttggacgtcaacgttgtagatccagaagcatgggtattctggtagt 92445  T
Q  304 ttagattttatcatattatttctaggcatttt 335  Q
    ||| ||||||||||||| ||| ||||||||||    
T  92444 ttaaattttatcatattgtttgtaggcatttt 92413  T

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Target: scaffold0884 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0884
Description:

Target: scaffold0884; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 251 - 335
Target Start/End: Complemental strand, 1974 - 1890
Alignment:
Q  251 caatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    ||||| ||||| ||| ||| ||||| |||||||||||| | ||||| |||||||||| |||||||||||||||| ||||||||||    
T  1974 caatggtttgggcgtcaacgttgcagatccgaaaacataagtatttcggtgatttaggttttatcatattatttgtaggcatttt 1890  T

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Target: scaffold0017 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 251 - 335
Target Start/End: Complemental strand, 32748 - 32664
Alignment:
Q  251 caatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    ||||||||||||||| ||| ||||| ||| | || ||||| ||||| ||||| ||||||||||||||||||||| ||||||||||    
T  32748 caatgatttggacgtcaacgttgcagatctggaagcatgagtatttcggtgacttagattttatcatattatttgtaggcatttt 32664  T

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Target: scaffold0039 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 204 - 335
Target Start/End: Original strand, 93148 - 93279
Alignment:
Q  204 gtttgattcatattgaaagatcagttttagtcaatcatagttacaatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgat 303  Q
    ||||| |||||||||||||||| |||| | ||||||| |  |  ||||||||||| |||||| ||| ||||| ||||  ||| |||  |||| |||||||    
T  93148 gtttggttcatattgaaagatcggtttcactcaatcacatattgaatcaatgattaggacgtcaacgttgcagatccagaaatatgggtattctggtgat 93247  T
Q  304 ttagattttatcatattatttctaggcatttt 335  Q
    ||| ||||||||||||| ||| ||||||||||    
T  93248 ttaaattttatcatattgtttgtaggcatttt 93279  T

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Target: scaffold0347 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 247 - 335
Target Start/End: Original strand, 6114 - 6202
Alignment:
Q  247 caatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    |||||||||||||||| || ||  ||||| ||||| || ||||  |||| |||||||||||||||||||||||||||| ||| ||||||    
T  6114 caatcaatgatttggatgtcaatgttgcagatccggaagcatgtgtattctggtgatttagattttatcatattatttgtagacatttt 6202  T

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Target: scaffold0088 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 251 - 335
Target Start/End: Original strand, 50864 - 50948
Alignment:
Q  251 caatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    ||||||||||||||| ||| ||||| ||||| || |||| |||||| ||||| |||  |||||||||||||||| ||||||||||    
T  50864 caatgatttggacgtcaacgttgcagatccggaagcatggatatttcggtgacttaagttttatcatattatttgtaggcatttt 50948  T

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Target: scaffold0888 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0888
Description:

Target: scaffold0888; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 283 - 336
Target Start/End: Complemental strand, 1647 - 1594
Alignment:
Q  283 aaacatgaatattttggtgatttagattttatcatattatttctaggcatttta 336  Q
    |||||||  |||| |||||||||||||||||||||||||||| |||||||||||    
T  1647 aaacatgggtattctggtgatttagattttatcatattatttgtaggcatttta 1594  T

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Target: scaffold0021 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 271 - 335
Target Start/End: Original strand, 4280 - 4344
Alignment:
Q  271 ttgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    ||||| |||||||| | ||| ||||||| ||||||||||||||||||||||||| ||| ||||||    
T  4280 ttgcagatccgaaagcttgagtattttgatgatttagattttatcatattatttgtagacatttt 4344  T

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Target: scaffold0015 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 233 - 335
Target Start/End: Complemental strand, 4059 - 3958
Alignment:
Q  233 gtcaatcatagttacaatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcat 332  Q
    |||||||| || | ||| ||||||||| ||||| ||| ||||| || || |||||||  |||| |||||||||| ||||||||||||||||| ||| |||    
T  4059 gtcaatcacagattcaaccaatgatttagacgtcaacgttgcatatacggaaacatgg-tattctggtgatttaaattttatcatattatttgtagacat 3961  T
Q  333 ttt 335  Q
    |||    
T  3960 ttt 3958  T

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Target: scaffold0262 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 247 - 339
Target Start/End: Complemental strand, 1824 - 1732
Alignment:
Q  247 caatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcattttaccg 339  Q
    ||||||||||||||| |   ||| ||||| ||||| || ||||  ||||| | ||| ||| ||||||||||||||||| ||||||||||||||    
T  1824 caatcaatgatttgggcaccaacgttgcagatccggaagcatgggtatttcgatgacttatattttatcatattatttgtaggcattttaccg 1732  T

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Target: scaffold0154 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 324
Target Start/End: Original strand, 25375 - 25451
Alignment:
Q  248 aatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattattt 324  Q
    |||||||||||||  ||| ||||||| | |||| ||||||||| |||||  |||| |||||||| ||||||||||||    
T  25375 aatcaatgatttgagcgtcaacattgtagatccaaaaacatgagtatttctgtgacttagatttgatcatattattt 25451  T

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Target: scaffold0128 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 247 - 335
Target Start/End: Original strand, 36909 - 36997
Alignment:
Q  247 caatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    ||||||||||||||| ||| ||  |||| |||| | || ||||  |||||  |||||||||||||||||||||||||| |||| |||||    
T  36909 caatcaatgatttgggcgtcaatgttgctaatctggaagcatgggtatttcagtgatttagattttatcatattatttgtaggtatttt 36997  T

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Target: scaffold0121 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 271 - 335
Target Start/End: Complemental strand, 31255 - 31191
Alignment:
Q  271 ttgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    ||||| ||||| || ||||  ||||| ||||| ||||||||||||||||||||| ||||||||||    
T  31255 ttgcagatccggaagcatgggtatttcggtgacttagattttatcatattatttataggcatttt 31191  T

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Target: scaffold0049 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 247 - 335
Target Start/End: Complemental strand, 71305 - 71217
Alignment:
Q  247 caatcaatgatttggacgttaacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    |||||||||||| ||  || ||| ||||| ||||| || ||||  ||||||| ||| ||||||||||| ||||||||| ||||||||||    
T  71305 caatcaatgattggggtgtcaacgttgcagatccggaagcatgggtattttgatgacttagattttattatattatttgtaggcatttt 71217  T

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Target: scaffold0445 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 293 - 335
Target Start/End: Original strand, 1474 - 1516
Alignment:
Q  293 attttggtgatttagattttatcatattatttctaggcatttt 335  Q
    |||| |||||||||| |||||||||||||||| ||||||||||    
T  1474 atttcggtgatttaggttttatcatattatttgtaggcatttt 1516  T

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Target: scaffold0219 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 267 - 335
Target Start/End: Complemental strand, 14855 - 14788
Alignment:
Q  267 aacattgcaaatccgaaaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    ||||||||| ||||| |||||||| ||||| | ||| |||||||| |||||||||||| || |||||||    
T  14855 aacattgcagatccggaaacatgagtatttcgatgacttagattt-atcatattatttgtatgcatttt 14788  T

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Target: scaffold0136 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 335
Target Start/End: Original strand, 38176 - 38228
Alignment:
Q  283 aaacatgaatattttggtgatttagattttatcatattatttctaggcatttt 335  Q
    |||||||  ||||| ||||| ||||||||||||||||||||| |||| |||||    
T  38176 aaacatgggtatttcggtgacttagattttatcatattatttgtagggatttt 38228  T

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