View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19175_low_148 (Length: 201)
Name: NF19175_low_148
Description: NF19175
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19175_low_148 |
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Alignment Details
Target: chr8 (Bit Score: 84; Significance: 4e-40; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 23 - 185
Target Start/End: Original strand, 30504686 - 30504847
Alignment:
| Q |
23 |
ttgtcaagaaaataataaataccaatttcctttcnnnnnnnttacaataccaattaaccacctactccatcgtctttttcctggnnnnnnnnnnnnnnnt |
122 |
Q |
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| T |
30504686 |
ttgtcaaaaaaataataaataccaatttcctttaaaaaaaattacaataccaattaaccacctactccatcgtctttttcctggaaaaaaaataaaaa-t |
30504784 |
T |
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| Q |
123 |
aacaataaacagttttttacaccgttgccaagtaccaaaaacacagtcagtgttatttgtttt |
185 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30504785 |
aacaataaacagttttttacaccgttgccaagtaccaaaaacacagtcagtgttatttgtttt |
30504847 |
T |
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