View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19175_low_25 (Length: 535)
Name: NF19175_low_25
Description: NF19175
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19175_low_25 |
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Alignment Details
Target: chr7 (Bit Score: 461; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 461; E-Value: 0
Query Start/End: Original strand, 19 - 499
Target Start/End: Complemental strand, 36671663 - 36671183
Alignment:
| Q |
19 |
tttacaagagctggtcccaggctgcgagaaggtccatttttctcatttaatctttaattttacaaccttaaatccttagttacgcagaataatcaatgat |
118 |
Q |
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| T |
36671663 |
tttacaagagctggtcccaggctgcgagaaggtccatttttctcttttaatctttaattttacaaccttaaatccttagttacgcagaataatcaatgat |
36671564 |
T |
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| Q |
119 |
taattatgcttcattgatttttgagtgtgattaatctatcattttctgtcaaatttgttccgctaaagtgcaaataaatatcttaagtacgatttaataa |
218 |
Q |
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| T |
36671563 |
taattatgcttcattgatttttgagtgtgattaatctatcattttctgtcaaatttgttcccctaaagtgcaaataaatatcttaagtacgatttaataa |
36671464 |
T |
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| Q |
219 |
cggttttgttattggaccttttcaaaccccacaaaaagaaagtaccgtagttgctttcacgtcaagatagagaactgccaaacttggtatctgtgtaatt |
318 |
Q |
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| T |
36671463 |
cggttttgttattggaccttttcaaaccccacaaaaagaaagtaccgtagttgctttcacgtcaagatagagaagtgccaaacttggtatctgtgtaatt |
36671364 |
T |
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| Q |
319 |
tcaccttctctttggtttcactttatggggatttccttctggttacaaatctttttcgaaggttagtgttgcccaatttttcaaccattactctctttta |
418 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
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| T |
36671363 |
tcaccttctctttggtttcactttatggggatttccttctggttacaaatctttttcgaaggttagtgttgcccaatttttcaaccattaccttctttta |
36671264 |
T |
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| Q |
419 |
tgacattgaccttctccaccggtctattagatgctcaaattatttattttttcttaaatagtctaatggatgaaaattcat |
499 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36671263 |
tgacattgaccttctccaccggtctattagatgctcaaattatttattttttcttaaatagtctaatggatgaaaattcat |
36671183 |
T |
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