View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19175_low_4 (Length: 846)

Name: NF19175_low_4
Description: NF19175
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19175_low_4
NF19175_low_4
[»] chr5 (21 HSPs)
chr5 (408-829)||(10101486-10101907)
chr5 (206-442)||(10101927-10102163)
chr5 (155-404)||(10213895-10214138)
chr5 (453-617)||(13855158-13855322)
chr5 (155-356)||(9661591-9661790)
chr5 (671-829)||(10213950-10214110)
chr5 (226-438)||(10101424-10101630)
chr5 (504-653)||(10108108-10108263)
chr5 (671-813)||(9661646-9661790)
chr5 (224-356)||(12110133-12110265)
chr5 (684-829)||(10101997-10102144)
chr5 (456-558)||(10211541-10211643)
chr5 (456-585)||(9684411-9684540)
chr5 (684-813)||(12110134-12110265)
chr5 (689-738)||(9659844-9659893)
chr5 (235-279)||(9659849-9659893)
chr5 (44-92)||(9676960-9677008)
chr5 (341-438)||(9678343-9678436)
chr5 (295-346)||(14816398-14816449)
chr5 (58-92)||(10213818-10213852)
chr5 (155-196)||(12110075-12110116)
[»] chr4 (1 HSPs)
chr4 (310-353)||(8472547-8472590)
[»] chr2 (1 HSPs)
chr2 (313-358)||(6774724-6774769)


Alignment Details
Target: chr5 (Bit Score: 386; Significance: 0; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 386; E-Value: 0
Query Start/End: Original strand, 408 - 829
Target Start/End: Complemental strand, 10101907 - 10101486
Alignment:
Q  408 actaaagtgttaactgctgctaactaccacttaaagtgaaagatgaacaaggtgatcgatttaaatttctcagagaaaaatatatacagctccccgccag 507  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  10101907 actaaagtgttagctgctgctaactaccacttaaagtgaaagatgaacaaggtgatcgatttaactttctcagagaaaaatatatacagctccccgccag 10101808  T
Q  508 aatgcttaagcatacagagtatacaaaatgagccactgccaaacatctcaagactttaaacagtttatccaatcatcagttttcacttaagagtataaaa 607  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  10101807 aatgcttaagcatatagagtatacaaaatgagccactgccaaacatctcaagattttaaacagtttatccaatcatcagttttcacttaagagtataaaa 10101708  T
Q  608 agcaacagtttcaagtggaaggagacaactgatagaatttaaaaacgaggcaaacaattcatgctaaggggaaaagtaatactttaaaaagcatgcaact 707  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| ||||||||||||| |||||||||||||||||||||||    
T  10101707 agcaacagtttcaagtggaaggagacaactgatagaatttgaaaacgaggcgaacaattcattctaaggggaaaagcaatactttaaaaagcatgcaact 10101608  T
Q  708 tttaatgaaaaccttcatacaataacatgaatacagtgaatttgacgaaataacgatggcaccatgatgttgttatgctacaaagtgtagcttttgccaa 807  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  10101607 tttaatgaaaaccttcatacaataacatgaatacagtgaatttgacgaaataacgatggcaccgtgatgttgttatgctacaaagtgtagcttttgccaa 10101508  T
Q  808 gatcacaatggcttgccgtgat 829  Q
    ||||||||||||||||||||||    
T  10101507 gatcacaatggcttgccgtgat 10101486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 233; E-Value: 1e-128
Query Start/End: Original strand, 206 - 442
Target Start/End: Complemental strand, 10102163 - 10101927
Alignment:
Q  206 tattctaaggcgataagtataatatttttaaaagcatgtaacttttaatgaaaaacttcatacgataacttgaatcacggtgaatttgtcgaaataacgg 305  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  10102163 tattctaaggcgataagtataatatttttaaaagcatgtaacttttaatgaaaaacttcatacgataacttaaatcacggtgaatttgtcgaaataacgg 10102064  T
Q  306 tggaactgtgatgttgttgatgctacgaagtgtagcttttgccaaaatcacaatggctcgccgtgatttcactcgcctagttcatcgtcaatttaaacat 405  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10102063 tggaactgtgatgttgttgatgctacgaagtgtagcttttgccaaaatcacaatggctcgccgtgatttcactcgcctagttcatcgtcaatttaaacat 10101964  T
Q  406 gcactaaagtgttaactgctgctaactaccacttaaa 442  Q
    |||||||||||||||||||||||||||||||||||||    
T  10101963 gcactaaagtgttaactgctgctaactaccacttaaa 10101927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 155 - 404
Target Start/End: Original strand, 10213895 - 10214138
Alignment:
Q  155 gtcactataattgatggatggtgaaagtgaaactcctattctgagaagaactattctaaggcgataagtataatatttttaaaagcatgtaacttttaat 254  Q
    |||||||| |||||||||||||||||||| ||||  |||||| |  |||||| |||||||| || ||| |  ||||||| ||||||||||||||||||||    
T  10213895 gtcactattattgatggatggtgaaagtgtaacttttattctaaacagaactcttctaaggtgaaaagca--atattttgaaaagcatgtaacttttaat 10213992  T
Q  255 gaaaaacttcatacgataacttgaatcacggtgaatttgtcgaaataacggtggaactgtgatgttgttgatgctacgaagtgtagcttttgccaaaatc 354  Q
    ||||| ||||||||||||||||||| ||| ||||||| | | ||||||| |||| || ||||||||||||||||||| ||||||||||||||||||||||    
T  10213993 gaaaaccttcatacgataacttgaaccacagtgaattcgacaaaataactgtggcaccgtgatgttgttgatgctacaaagtgtagcttttgccaaaatc 10214092  T
Q  355 acaatggctcgccgtgatttcactcgcctagttcatcgtcaatttaaaca 404  Q
    ||||||||| || |||||||     ||||||||||||||| ||| |||||    
T  10214093 acaatggcttgcggtgatttt----gcctagttcatcgtcgattcaaaca 10214138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 453 - 617
Target Start/End: Complemental strand, 13855322 - 13855158
Alignment:
Q  453 aacaaggtgatcgatttaaatttctcagagaaaaatatatacagctccccgccagaatgcttaagcatacagagtatacaaaatgagccactgccaaaca 552  Q
    |||||||| || ||||||| ||| | |  |||||||||||||| | ||||||||||||||||||||||||| |||||||||| |||||||||||||||||    
T  13855322 aacaaggttattgatttaacttttttaacgaaaaatatatacaacgccccgccagaatgcttaagcatacacagtatacaaattgagccactgccaaaca 13855223  T
Q  553 tctcaagactttaaacagtttatccaatcatcagttttcacttaagagtataaaaagcaacagtt 617  Q
    |||||||||||  || | |||||||||||||||| ||||| ||||||||||||||||||||||||    
T  13855222 tctcaagacttcgaatattttatccaatcatcagatttcagttaagagtataaaaagcaacagtt 13855158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 155 - 356
Target Start/End: Original strand, 9661591 - 9661790
Alignment:
Q  155 gtcactataattgatggatggtgaaagtgaaactcctattctgagaagaactattctaaggcgataagtataatatttttaaaagcatgtaacttttaat 254  Q
    ||||||||||||||||||| ||||||||| ||||| |||||| || | |||| | |||||| || |||||  ||||||| ||||||||| |||||||| |    
T  9661591 gtcactataattgatggatagtgaaagtgtaactcgtattctaagcataactctcctaaggtgaaaagta--atattttaaaaagcatgcaacttttatt 9661688  T
Q  255 gaaaaacttcatacgataacttgaatcacggtgaatttgtcgaaataacggtggaactgtgatgttgttgatgctacgaagtgtagcttttgccaaaatc 354  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||| || ||||| || |||||||||||||| |||  |||||| | |||||||||||||    
T  9661689 gaaaaccttcatacgataacttgaatcacggtgaatttgacgaaacaaaggtggcaccgtgatgttgttgattctataaagtgtggtttttgccaaaatc 9661788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 671 - 829
Target Start/End: Original strand, 10213950 - 10214110
Alignment:
Q  671 ctaaggggaaaagtaatactttaaaaagcatgcaacttttaatgaaaaccttcatacaataacatgaa-tacagtgaatttgacgaaataacgatggcac 769  Q
    |||||| |||||| |||| ||| ||||||||| |||||||||||||||||||||||| ||||| ||||  |||||||||| ||| |||||||  ||||||    
T  10213950 ctaaggtgaaaagcaatattttgaaaagcatgtaacttttaatgaaaaccttcatacgataacttgaaccacagtgaattcgacaaaataactgtggcac 10214049  T
Q  770 catgatgttgtt-atgctacaaagtgtagcttttgccaagatcacaatggcttgccgtgat 829  Q
    | |||||||||| |||||||||||||||||||||||||| ||||||||||||||| |||||    
T  10214050 cgtgatgttgttgatgctacaaagtgtagcttttgccaaaatcacaatggcttgcggtgat 10214110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 226 - 438
Target Start/End: Complemental strand, 10101630 - 10101424
Alignment:
Q  226 aatatttttaaaagcatgtaacttttaatgaaaaacttcatacgataacttgaatcacggtgaatttgtcgaaataacggtggaactgtgatgttgttga 325  Q
    |||| ||| ||||||||| ||||||||||||||| |||||||| ||||| ||||| || ||||||||| |||||||||| ||| || ||||||||||| |    
T  10101630 aatactttaaaaagcatgcaacttttaatgaaaaccttcatacaataacatgaat-acagtgaatttgacgaaataacgatggcaccgtgatgttgtt-a 10101533  T
Q  326 tgctacgaagtgtagcttttgccaaaatcacaatggctcgccgtgatttcactcgcctagttcatcgtcaatttaaacatgcactaaagtgttaactgct 425  Q
    |||||| |||||||||||||||||| |||||||||||| ||||||||||     ||||| ||||||||  ||| |||||  ||||||||| ||| |||||    
T  10101532 tgctacaaagtgtagcttttgccaagatcacaatggcttgccgtgatttt----gcctaattcatcgttgattcaaacacacactaaagtattatctgct 10101437  T
Q  426 gctaactaccact 438  Q
    |||||| ||||||    
T  10101436 gctaacaaccact 10101424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 504 - 653
Target Start/End: Complemental strand, 10108263 - 10108108
Alignment:
Q  504 ccagaatgcttaagcatacag-------agtatacaaaatgagccactgccaaacatctcaagactttaaacagtttatccaatcatcagttttcactta 596  Q
    |||||||||||||||||||||       |||||||| | ||||||||||||||||||||||||| || ||||| | |||||||||||||| ||||||||     
T  10108263 ccagaatgcttaagcatacagtatacgaagtatacagactgagccactgccaaacatctcaagatttcaaacattgtatccaatcatcagatttcactt- 10108165  T
Q  597 agagtataaaaagcaacagtttcaagtggaaggagacaactgatagaatttaaaaac 653  Q
    || |||||||||||||||| || | | |||||||||||||| |||||||||||||||    
T  10108164 agggtataaaaagcaacagctttaggaggaaggagacaactaatagaatttaaaaac 10108108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 671 - 813
Target Start/End: Original strand, 9661646 - 9661790
Alignment:
Q  671 ctaaggggaaaagtaatactttaaaaagcatgcaacttttaatgaaaaccttcatacaataacatgaat-acagtgaatttgacgaaataacgatggcac 769  Q
    |||||| ||||||||||| |||||||||||||||||||||| ||||||||||||||| ||||| ||||| || ||||||||||||||| || | ||||||    
T  9661646 ctaaggtgaaaagtaatattttaaaaagcatgcaacttttattgaaaaccttcatacgataacttgaatcacggtgaatttgacgaaacaaaggtggcac 9661745  T
Q  770 catgatgttgtt-atgctacaaagtgtagcttttgccaagatcac 813  Q
    | |||||||||| || ||| ||||||| | ||||||||| |||||    
T  9661746 cgtgatgttgttgattctataaagtgtggtttttgccaaaatcac 9661790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 224 - 356
Target Start/End: Original strand, 12110133 - 12110265
Alignment:
Q  224 ataatatttttaaaagcatgtaacttttaatgaaaaacttcatacgataacttgaatcacggtgaatttgtcgaaataacggtggaactgtgatgttgtt 323  Q
    |||||||||| ||||||||| |||||||| |||||| ||||||||  ||||||||||||||||||||||  ||||| || ||||| ||||||||||||||    
T  12110133 ataatattttaaaaagcatgcaacttttattgaaaaccttcatacagtaacttgaatcacggtgaatttaacgaaacaaaggtggcactgtgatgttgtt 12110232  T
Q  324 gatgctacgaagtgtagcttttgccaaaatcac 356  Q
    ||| |||| ||||| || ||||| |||||||||    
T  12110233 gattctacaaagtgaagtttttgtcaaaatcac 12110265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 684 - 829
Target Start/End: Complemental strand, 10102144 - 10101997
Alignment:
Q  684 taatactttaaaaagcatgcaacttttaatgaaaaccttcatacaataacatgaat-acagtgaatttgacgaaataacgatggcaccatgatgttgtt- 781  Q
    ||||| ||| ||||||||| ||||||||||||||| |||||||| ||||| | ||| || ||||||||| |||||||||| ||| ||  ||||||||||     
T  10102144 taatatttttaaaagcatgtaacttttaatgaaaaacttcatacgataacttaaatcacggtgaatttgtcgaaataacggtggaactgtgatgttgttg 10102045  T
Q  782 atgctacaaagtgtagcttttgccaagatcacaatggcttgccgtgat 829  Q
    ||||||| |||||||||||||||||| |||||||||||| ||||||||    
T  10102044 atgctacgaagtgtagcttttgccaaaatcacaatggctcgccgtgat 10101997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 456 - 558
Target Start/End: Original strand, 10211541 - 10211643
Alignment:
Q  456 aaggtgatcgatttaaatttctcagagaaaaatatatacagctccccgccagaatgcttaagcatacagagtatacaaaatgagccactgccaaacatct 555  Q
    ||||||||||||||||  || ||| ||||||||||||||| | ||||||||||||||||||||||||  |||||||||| ||||||||||||||| ||||    
T  10211541 aaggtgatcgatttaaccttttcaaagaaaaatatatacaacgccccgccagaatgcttaagcataccaagtatacaaactgagccactgccaaatatct 10211640  T
Q  556 caa 558  Q
    |||    
T  10211641 caa 10211643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 456 - 585
Target Start/End: Original strand, 9684411 - 9684540
Alignment:
Q  456 aaggtgatcgatttaaatttctcagagaaaaatatatacagctccccgccagaatgcttaagcatacagagtatacaaaatgagccactgccaaacatct 555  Q
    |||||||||||||||| ||| ||| ||||||||||||||| | |||| ||||| || |||||||||||| | ||||||| ||||||||  ||||||||||    
T  9684411 aaggtgatcgatttaactttttcaaagaaaaatatatacaacaccccaccagattgtttaagcatacagcgcatacaaactgagccaccaccaaacatct 9684510  T
Q  556 caagactttaaacagtttatccaatcatca 585  Q
    |||| ||| ||||  |||||| ||||||||    
T  9684511 caagtcttcaaacgttttatctaatcatca 9684540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 684 - 813
Target Start/End: Original strand, 12110134 - 12110265
Alignment:
Q  684 taatactttaaaaagcatgcaacttttaatgaaaaccttcatacaataacatgaat-acagtgaatttgacgaaataacgatggcaccatgatgttgtt- 781  Q
    ||||| |||||||||||||||||||||| |||||||||||||||| |||| ||||| || |||||||| |||||| || | ||||||  ||||||||||     
T  12110134 taatattttaaaaagcatgcaacttttattgaaaaccttcatacagtaacttgaatcacggtgaatttaacgaaacaaaggtggcactgtgatgttgttg 12110233  T
Q  782 atgctacaaagtgtagcttttgccaagatcac 813  Q
    || |||||||||| || ||||| ||| |||||    
T  12110234 attctacaaagtgaagtttttgtcaaaatcac 12110265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 689 - 738
Target Start/End: Original strand, 9659844 - 9659893
Alignment:
Q  689 ctttaaaaagcatgcaacttttaatgaaaaccttcatacaataacatgaa 738  Q
    |||||||||||||||||||||||||||||| |||||||| ||||| ||||    
T  9659844 ctttaaaaagcatgcaacttttaatgaaaatcttcatacgataacttgaa 9659893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 235 - 279
Target Start/End: Original strand, 9659849 - 9659893
Alignment:
Q  235 aaaagcatgtaacttttaatgaaaaacttcatacgataacttgaa 279  Q
    ||||||||| ||||||||||||||| |||||||||||||||||||    
T  9659849 aaaagcatgcaacttttaatgaaaatcttcatacgataacttgaa 9659893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 44 - 92
Target Start/End: Original strand, 9676960 - 9677008
Alignment:
Q  44 tacccctttataagttgtggtatggttcatcttttatctattgtaacaa 92  Q
    ||||||||||||||| ||||||||||| | |||||||||||||||||||    
T  9676960 tacccctttataagtggtggtatggtttaccttttatctattgtaacaa 9677008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 341 - 438
Target Start/End: Original strand, 9678343 - 9678436
Alignment:
Q  341 cttttgccaaaatcacaatggctcgccgtgatttcactcgcctagttcatcgtcaatttaaacatgcactaaagtgttaactgctgctaactaccact 438  Q
    ||||| |||||||||   |||||||| ||||||||||    ||||||||  ||||||| |||||||||||||||| ||| |  |||||||||||||||    
T  9678343 ctttttccaaaatcatggtggctcgcggtgatttcac----ctagttcagtgtcaattcaaacatgcactaaagtattagccactgctaactaccact 9678436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 295 - 346
Target Start/End: Complemental strand, 14816449 - 14816398
Alignment:
Q  295 cgaaataacggtggaactgtgatgttgttgatgctacgaagtgtagcttttg 346  Q
    |||||| |||||||||| ||||| ||||||| ||| ||||||||||||||||    
T  14816449 cgaaatcacggtggaaccgtgattttgttgaagctccgaagtgtagcttttg 14816398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 58 - 92
Target Start/End: Original strand, 10213818 - 10213852
Alignment:
Q  58 ttgtggtatggttcatcttttatctattgtaacaa 92  Q
    ||||||||||||| |||||||||||||||||||||    
T  10213818 ttgtggtatggtttatcttttatctattgtaacaa 10213852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 196
Target Start/End: Original strand, 12110075 - 12110116
Alignment:
Q  155 gtcactataattgatggatggtgaaagtgaaactcctattct 196  Q
    ||||||||||||||||||| ||||||||| ||||| ||||||    
T  12110075 gtcactataattgatggatagtgaaagtgtaactcttattct 12110116  T

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Target: chr4 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 310 - 353
Target Start/End: Complemental strand, 8472590 - 8472547
Alignment:
Q  310 actgtgatgttgttgatgctacgaagtgtagcttttgccaaaat 353  Q
    |||||||| ||||||| ||||| |||||||||||||||||||||    
T  8472590 actgtgattttgttgaagctacaaagtgtagcttttgccaaaat 8472547  T

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Target: chr2 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 313 - 358
Target Start/End: Original strand, 6774724 - 6774769
Alignment:
Q  313 gtgatgttgttgatgctacgaagtgtagcttttgccaaaatcacaa 358  Q
    ||||| ||||||| ||| ||||||||||||||||| ||||||||||    
T  6774724 gtgattttgttgaagctccgaagtgtagcttttgctaaaatcacaa 6774769  T

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