View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19175_low_61 (Length: 382)

Name: NF19175_low_61
Description: NF19175
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19175_low_61
NF19175_low_61
[»] chr8 (23 HSPs)
chr8 (150-248)||(32131402-32131500)
chr8 (161-219)||(13131421-13131479)
chr8 (162-219)||(16972395-16972452)
chr8 (150-219)||(19327858-19327926)
chr8 (150-221)||(4326239-4326310)
chr8 (150-205)||(28879063-28879118)
chr8 (150-220)||(34102712-34102783)
chr8 (150-205)||(35453415-35453470)
chr8 (160-206)||(13265488-13265534)
chr8 (163-244)||(1088917-1088998)
chr8 (150-219)||(31459037-31459106)
chr8 (160-205)||(34286599-34286644)
chr8 (165-213)||(11988194-11988242)
chr8 (161-205)||(32213059-32213103)
chr8 (150-194)||(35168467-35168511)
chr8 (150-205)||(32975692-32975747)
chr8 (150-205)||(34338426-34338481)
chr8 (166-219)||(7638514-7638567)
chr8 (150-219)||(16706126-16706195)
chr8 (150-219)||(16926758-16926827)
chr8 (150-206)||(1089017-1089073)
chr8 (150-186)||(23412758-23412794)
chr8 (165-205)||(29243104-29243144)
[»] chr4 (28 HSPs)
chr4 (163-236)||(29996678-29996751)
chr4 (168-242)||(29877607-29877681)
chr4 (150-235)||(948047-948132)
chr4 (169-242)||(18424322-18424395)
chr4 (150-242)||(3564188-3564280)
chr4 (150-242)||(23297406-23297498)
chr4 (150-219)||(27368178-27368247)
chr4 (150-246)||(35124351-35124447)
chr4 (150-242)||(43699509-43699601)
chr4 (150-206)||(55638107-55638163)
chr4 (151-242)||(43415316-43415407)
chr4 (161-218)||(8130480-8130537)
chr4 (150-242)||(33533896-33533988)
chr4 (150-205)||(896975-897030)
chr4 (160-215)||(12495682-12495737)
chr4 (150-205)||(28074370-28074425)
chr4 (162-219)||(42611905-42611963)
chr4 (160-205)||(7148777-7148822)
chr4 (169-238)||(43740120-43740189)
chr4 (166-242)||(34526248-34526323)
chr4 (166-242)||(38345863-38345939)
chr4 (150-221)||(35010200-35010271)
chr4 (161-219)||(38515689-38515747)
chr4 (150-219)||(212974-213042)
chr4 (150-194)||(4331353-4331397)
chr4 (174-242)||(10794959-10795027)
chr4 (174-242)||(10796354-10796422)
chr4 (150-206)||(46650275-46650331)
[»] chr7 (24 HSPs)
chr7 (151-242)||(38372526-38372617)
chr7 (150-215)||(34922926-34922991)
chr7 (165-238)||(21249128-21249201)
chr7 (150-242)||(30181518-30181610)
chr7 (150-214)||(41677370-41677434)
chr7 (150-245)||(24414488-24414583)
chr7 (163-219)||(12473197-12473253)
chr7 (151-219)||(23119947-23120015)
chr7 (150-242)||(29390576-29390668)
chr7 (150-205)||(42083443-42083498)
chr7 (150-216)||(7098126-7098192)
chr7 (150-219)||(44613499-44613568)
chr7 (150-219)||(48021673-48021742)
chr7 (150-248)||(14536844-14536942)
chr7 (160-219)||(23356527-23356586)
chr7 (150-205)||(29378650-29378705)
chr7 (182-248)||(22515565-22515631)
chr7 (150-220)||(39803014-39803084)
chr7 (163-205)||(47511048-47511090)
chr7 (150-191)||(14691325-14691366)
chr7 (160-205)||(33288135-33288180)
chr7 (163-219)||(9546423-9546479)
chr7 (150-206)||(22319317-22319373)
chr7 (150-242)||(40629443-40629534)
[»] chr5 (37 HSPs)
chr5 (150-237)||(42851995-42852082)
chr5 (150-245)||(11991270-11991365)
chr5 (150-232)||(22201962-22202044)
chr5 (150-219)||(29922215-29922284)
chr5 (169-237)||(17128251-17128319)
chr5 (150-242)||(6150349-6150437)
chr5 (150-219)||(2878702-2878771)
chr5 (150-219)||(10537245-10537314)
chr5 (150-227)||(12467247-12467324)
chr5 (150-219)||(43010626-43010695)
chr5 (150-242)||(1372019-1372111)
chr5 (166-246)||(14243787-14243867)
chr5 (160-211)||(1473355-1473406)
chr5 (151-242)||(3520530-3520620)
chr5 (163-246)||(42558759-42558841)
chr5 (150-244)||(2670041-2670135)
chr5 (151-205)||(41534628-41534682)
chr5 (160-217)||(7984098-7984155)
chr5 (150-219)||(12987040-12987109)
chr5 (150-219)||(13060628-13060697)
chr5 (150-219)||(22573644-22573713)
chr5 (150-199)||(24030226-24030275)
chr5 (150-242)||(1576599-1576690)
chr5 (150-242)||(1608125-1608216)
chr5 (162-242)||(11163307-11163387)
chr5 (163-219)||(26002988-26003044)
chr5 (150-205)||(17657247-17657302)
chr5 (150-205)||(28625485-28625540)
chr5 (150-205)||(40452504-40452559)
chr5 (150-205)||(42706801-42706856)
chr5 (160-194)||(31637130-31637164)
chr5 (150-227)||(40152902-40152979)
chr5 (150-199)||(43265967-43266016)
chr5 (150-219)||(43318994-43319063)
chr5 (150-194)||(1868862-1868906)
chr5 (169-237)||(27981957-27982025)
chr5 (150-218)||(30852163-30852231)
[»] chr2 (22 HSPs)
chr2 (150-219)||(34913416-34913485)
chr2 (150-227)||(21788440-21788517)
chr2 (150-219)||(33321338-33321407)
chr2 (150-246)||(25836738-25836834)
chr2 (150-218)||(37409635-37409703)
chr2 (150-245)||(4026891-4026985)
chr2 (150-237)||(33321429-33321516)
chr2 (161-206)||(29133704-29133749)
chr2 (160-240)||(4090459-4090539)
chr2 (150-246)||(37419990-37420085)
chr2 (150-194)||(42839346-42839390)
chr2 (150-205)||(887417-887472)
chr2 (168-219)||(27703502-27703553)
chr2 (160-199)||(35731149-35731188)
chr2 (150-216)||(5516069-5516135)
chr2 (150-192)||(12442831-12442873)
chr2 (169-219)||(15155804-15155854)
chr2 (150-184)||(33555685-33555719)
chr2 (151-242)||(38215991-38216078)
chr2 (150-219)||(8441464-8441533)
chr2 (150-243)||(35515506-35515599)
chr2 (163-219)||(755781-755837)
[»] chr3 (26 HSPs)
chr3 (150-242)||(21296734-21296826)
chr3 (150-237)||(40581103-40581190)
chr3 (150-219)||(7292671-7292740)
chr3 (150-219)||(11528882-11528951)
chr3 (150-242)||(22809219-22809312)
chr3 (150-242)||(29270329-29270421)
chr3 (150-242)||(34707739-34707831)
chr3 (150-242)||(53218066-53218158)
chr3 (150-218)||(32901174-32901242)
chr3 (150-214)||(43971873-43971937)
chr3 (168-242)||(10272090-10272164)
chr3 (150-219)||(10448765-10448834)
chr3 (150-199)||(10521165-10521214)
chr3 (150-199)||(10667409-10667458)
chr3 (160-213)||(24842143-24842196)
chr3 (150-199)||(52421167-52421216)
chr3 (163-242)||(5129916-5129995)
chr3 (150-205)||(43079960-43080015)
chr3 (150-205)||(52021251-52021306)
chr3 (163-213)||(36266241-36266291)
chr3 (150-199)||(3845866-3845915)
chr3 (173-242)||(23555452-23555521)
chr3 (150-227)||(27769629-27769705)
chr3 (165-213)||(4257342-4257390)
chr3 (150-206)||(5129841-5129897)
chr3 (150-206)||(30198982-30199038)
[»] chr6 (21 HSPs)
chr6 (150-216)||(30533974-30534040)
chr6 (150-205)||(10054386-10054441)
chr6 (163-219)||(2040225-2040281)
chr6 (150-205)||(2034255-2034310)
chr6 (150-221)||(4272371-4272442)
chr6 (150-213)||(22816611-22816674)
chr6 (150-216)||(3211027-3211093)
chr6 (161-246)||(9201768-9201853)
chr6 (150-219)||(29623503-29623572)
chr6 (150-191)||(34509931-34509972)
chr6 (160-199)||(1240647-1240686)
chr6 (150-205)||(2027202-2027257)
chr6 (150-205)||(12817118-12817173)
chr6 (150-248)||(8014751-8014848)
chr6 (150-219)||(6632650-6632719)
chr6 (150-219)||(6758618-6758687)
chr6 (160-205)||(10755316-10755361)
chr6 (163-219)||(2255725-2255781)
chr6 (150-194)||(7267791-7267835)
chr6 (182-242)||(10658304-10658364)
chr6 (150-242)||(24625819-24625911)
[»] chr1 (30 HSPs)
chr1 (150-247)||(18327487-18327584)
chr1 (150-242)||(1265719-1265811)
chr1 (150-219)||(10365162-10365231)
chr1 (150-219)||(10850097-10850166)
chr1 (150-219)||(20169255-20169324)
chr1 (150-242)||(10082218-10082310)
chr1 (150-242)||(37712036-37712127)
chr1 (152-227)||(49738328-49738404)
chr1 (150-205)||(6337782-6337837)
chr1 (150-246)||(28689966-28690064)
chr1 (154-242)||(391136-391225)
chr1 (150-199)||(4068126-4068175)
chr1 (150-246)||(26946130-26946227)
chr1 (160-237)||(35590103-35590180)
chr1 (150-219)||(35897649-35897718)
chr1 (150-194)||(15515373-15515417)
chr1 (166-242)||(16225477-16225553)
chr1 (160-216)||(41003381-41003437)
chr1 (150-194)||(41196736-41196780)
chr1 (150-213)||(26542970-26543033)
chr1 (150-205)||(36423007-36423062)
chr1 (150-213)||(46501027-46501090)
chr1 (150-205)||(51409733-51409788)
chr1 (150-188)||(39941463-39941501)
chr1 (150-246)||(1565408-1565502)
chr1 (150-219)||(15631895-15631964)
chr1 (150-199)||(26988159-26988208)
chr1 (163-199)||(16889004-16889040)
chr1 (150-242)||(19284864-19284956)
chr1 (171-219)||(46689597-46689645)
[»] scaffold0157 (1 HSPs)
scaffold0157 (160-215)||(24740-24795)
[»] scaffold0332 (1 HSPs)
scaffold0332 (150-199)||(14772-14821)
[»] scaffold1088 (1 HSPs)
scaffold1088 (150-238)||(1266-1354)
[»] scaffold0012 (1 HSPs)
scaffold0012 (165-212)||(178498-178545)
[»] scaffold0048 (1 HSPs)
scaffold0048 (150-199)||(58894-58943)
[»] scaffold1367 (1 HSPs)
scaffold1367 (163-219)||(1049-1105)


Alignment Details
Target: chr8 (Bit Score: 51; Significance: 4e-20; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 150 - 248
Target Start/End: Complemental strand, 32131500 - 32131402
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttattcattttcataaattgttttgcataaacccaaaagtaagtcaattcaaatgggtc 248  Q
    ||||||||  |||||||||||| ||||||| |||||||||||||| |||| |||||  |||||||||||| | ||||| ||||||||| ||||||||||    
T  32131500 ataaactaccttgacaaacttaggaataatgcataaaagcttatttatttgcataagctgttttgcataagctcaaaaataagtcaatccaaatgggtc 32131402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 13131479 - 13131421
Alignment:
Q  161 tgacaaacttatgaataatacataaaagcttattcattttcataaattgttttgcataa 219  Q
    |||||||||||||||||||||||||||||||||| |||| ||||| |||||||||||||    
T  13131479 tgacaaacttatgaataatacataaaagcttatttatttgcataatttgttttgcataa 13131421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 162 - 219
Target Start/End: Original strand, 16972395 - 16972452
Alignment:
Q  162 gacaaacttatgaataatacataaaagcttattcattttcataaattgttttgcataa 219  Q
    ||||||||||||||||||||||| ||||||||| |||| || ||||||||||||||||    
T  16972395 gacaaacttatgaataatacatacaagcttatttatttgcaaaaattgttttgcataa 16972452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 150 - 219
Target Start/End: Complemental strand, 19327926 - 19327858
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttattcattttcataaattgttttgcataa 219  Q
    |||||||| ||| |||||||||||||||||||||||||| ||||| |||| ||||| |||||||||||||    
T  19327926 ataaactacatt-acaaacttatgaataatacataaaagtttatttatttgcataagttgttttgcataa 19327858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 150 - 221
Target Start/End: Original strand, 4326239 - 4326310
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttattcattttcataaattgttttgcataaac 221  Q
    |||||||| ||| | ||||||||||||||||||||||  |||||| |||| | |||| ||||||||||||||    
T  4326239 ataaactacatttataaacttatgaataatacataaagacttatttatttccctaaactgttttgcataaac 4326310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 150 - 205
Target Start/End: Complemental strand, 28879118 - 28879063
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttattcattttcataa 205  Q
    ||||||||  ||||||| ||||||||||||||||||||||||||| |||| |||||    
T  28879118 ataaactaccttgacaagcttatgaataatacataaaagcttatttatttgcataa 28879063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 150 - 220
Target Start/End: Original strand, 34102712 - 34102783
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttattcattt-tcataaattgttttgcataaa 220  Q
    |||||||| ||| | ||||| |||||||||||||||||||||||| ||||  |||||||| |||||||||||    
T  34102712 ataaactacatttaaaaactcatgaataatacataaaagcttatttatttggcataaattattttgcataaa 34102783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 150 - 205
Target Start/End: Complemental strand, 35453470 - 35453415
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttattcattttcataa 205  Q
    ||||||||  |||| |||||||||||||||||||||||||||||| |||| |||||    
T  35453470 ataaactaccttgataaacttatgaataatacataaaagcttatttatttgcataa 35453415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 160 - 206
Target Start/End: Complemental strand, 13265534 - 13265488
Alignment:
Q  160 ttgacaaacttatgaataatacataaaagcttattcattttcataaa 206  Q
    ||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  13265534 ttgacaagcttatgaataatacataaaagcttatttatttgcataaa 13265488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 163 - 244
Target Start/End: Complemental strand, 1088998 - 1088917
Alignment:
Q  163 acaaacttatgaataatacataaaagcttattcattttcataaattgttttgcataaacccaaaagtaagtcaattcaaatg 244  Q
    |||| |||||| |||||||| |||| ||||||  ||| ||||| ||||||||||||| |  |||| ||||||||||||||||    
T  1088998 acaagcttatggataatacacaaaatcttatttgtttgcataatttgttttgcataagcttaaaaataagtcaattcaaatg 1088917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 150 - 219
Target Start/End: Complemental strand, 31459106 - 31459037
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttattcattttcataaattgttttgcataa 219  Q
    ||||||||||||||||||||||| ||||||| ||||||  ||||| |||| |||||| || ||| |||||    
T  31459106 ataaactatattgacaaacttataaataatatataaaaatttatttatttacataaactgcttttcataa 31459037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 160 - 205
Target Start/End: Original strand, 34286599 - 34286644
Alignment:
Q  160 ttgacaaacttatgaataatacataaaagcttattcattttcataa 205  Q
    ||||||| ||||||||||||||||||||||||||| |||| |||||    
T  34286599 ttgacaagcttatgaataatacataaaagcttatttatttacataa 34286644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 213
Target Start/End: Complemental strand, 11988242 - 11988194
Alignment:
Q  165 aaacttatgaataatacataaaagcttattcattttcataaattgtttt 213  Q
    |||||||| |||||||||||||| |||||| |||| |||||||||||||    
T  11988242 aaacttataaataatacataaaaacttatttatttgcataaattgtttt 11988194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 161 - 205
Target Start/End: Original strand, 32213059 - 32213103
Alignment:
Q  161 tgacaaacttatgaataatacataaaagcttattcattttcataa 205  Q
    |||||| ||||||||||||||||||||||||||| |||| |||||    
T  32213059 tgacaagcttatgaataatacataaaagcttatttatttgcataa 32213103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 194
Target Start/End: Original strand, 35168467 - 35168511
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttatt 194  Q
    ||||||||  ||||||| |||||||||||||||||||||||||||    
T  35168467 ataaactaccttgacaagcttatgaataatacataaaagcttatt 35168511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 150 - 205
Target Start/End: Complemental strand, 32975747 - 32975692
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttattcattttcataa 205  Q
    ||||||||  ||||||| ||||||||||||| ||||||||||||| |||| |||||    
T  32975747 ataaactaccttgacaagcttatgaataatatataaaagcttatttatttgcataa 32975692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 150 - 205
Target Start/End: Original strand, 34338426 - 34338481
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttattcattttcataa 205  Q
    ||||||||||||||||||||||| ||||||||  ||||||| ||| |||| |||||    
T  34338426 ataaactatattgacaaacttataaataataccaaaaagctcatttatttgcataa 34338481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 219
Target Start/End: Complemental strand, 7638567 - 7638514
Alignment:
Q  166 aacttatgaataatacataaaagcttattcattttcataaattgttttgcataa 219  Q
    ||||||| ||||||||||||||||| ||| |||| ||||||  |||||||||||    
T  7638567 aacttattaataatacataaaagctgatttatttgcataaacagttttgcataa 7638514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 219
Target Start/End: Original strand, 16706126 - 16706195
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttattcattttcataaattgttttgcataa 219  Q
    |||||||| |||  |||||||||||||||||||||||| | |||| |||| |||||   |||||||||||    
T  16706126 ataaactacattttcaaacttatgaataatacataaaaacatatttatttgcataagccgttttgcataa 16706195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 219
Target Start/End: Original strand, 16926758 - 16926827
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttattcattttcataaattgttttgcataa 219  Q
    |||||||||||| ||||||| || |||||||||| |||| ||||| |||| | ||| ||||||| |||||    
T  16926758 ataaactatatttacaaactaatcaataatacattaaagtttatttatttacctaagttgttttacataa 16926827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 206
Target Start/End: Complemental strand, 1089073 - 1089017
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttattcattttcataaa 206  Q
    ||||| || |||||||| |||||||||||||||| ||| |||||| |||| ||||||    
T  1089073 ataaagtacattgacaagcttatgaataatacattaaaacttatttatttgcataaa 1089017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 186
Target Start/End: Complemental strand, 23412794 - 23412758
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaa 186  Q
    |||||||||||||||||  ||||||||||||||||||    
T  23412794 ataaactatattgacaagtttatgaataatacataaa 23412758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 165 - 205
Target Start/End: Original strand, 29243104 - 29243144
Alignment:
Q  165 aaacttatgaataatacataaaagcttattcattttcataa 205  Q
    |||||||| ||||||||||||||||||||| |||| |||||    
T  29243104 aaacttataaataatacataaaagcttatttatttgcataa 29243144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 50; Significance: 2e-19; HSPs: 28)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 163 - 236
Target Start/End: Original strand, 29996678 - 29996751
Alignment:
Q  163 acaaacttatgaataatacataaaagcttattcattttcataaattgttttgcataaacccaaaagtaagtcaa 236  Q
    |||||||||||||||||| ||||||||||||| |||| |||||||||||||||| |||| ||||| ||||||||    
T  29996678 acaaacttatgaataatatataaaagcttatttatttgcataaattgttttgcaaaaactcaaaaataagtcaa 29996751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 168 - 242
Target Start/End: Complemental strand, 29877681 - 29877607
Alignment:
Q  168 cttatgaataatacataaaagcttattcattttcataaattgttttgcataaacccaaaagtaagtcaattcaaa 242  Q
    ||||||||||||||||||||||||||| |||| ||||||||||||||||||| | ||||| |||| |||| ||||    
T  29877681 cttatgaataatacataaaagcttatttatttgcataaattgttttgcataagctcaaaaataagccaatccaaa 29877607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 150 - 235
Target Start/End: Complemental strand, 948132 - 948047
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttattcattttcataaattgttttgcataaacccaaaagtaagtca 235  Q
    ||||||||  |||||||| |||||||||||||||||||||||||| ||||||||||  | |||||||||| |  ||||||||||||    
T  948132 ataaactaccttgacaaagttatgaataatacataaaagcttatttattttcataagctattttgcataagctaaaaagtaagtca 948047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 169 - 242
Target Start/End: Original strand, 18424322 - 18424395
Alignment:
Q  169 ttatgaataatacataaaagcttattcattttcataaattgttttgcataaacccaaaagtaagtcaattcaaa 242  Q
    |||||||||||||||||||||||||| ||||  |||||||||||||||||| | ||||| || |||||||||||    
T  18424322 ttatgaataatacataaaagcttatttatttgtataaattgttttgcataagctcaaaaatatgtcaattcaaa 18424395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 150 - 242
Target Start/End: Complemental strand, 3564280 - 3564188
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttattcattttcataaattgttttgcataaacccaaaagtaagtcaattcaaa 242  Q
    ||||||||  ||||||||||||||||||||| ||||||| ||||| ||||||||||  |||||||||||| | |||||  |||||||| ||||    
T  3564280 ataaactaccttgacaaacttatgaataatatataaaagtttatttattttcataagctgttttgcataagctcaaaaacaagtcaatccaaa 3564188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 150 - 242
Target Start/End: Complemental strand, 23297498 - 23297406
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttattcattttcataaattgttttgcataaacccaaaagtaagtcaattcaaa 242  Q
    ||||||||  ||||||||||||||||||||||||||||||||||| |||| |||||  | |||||||||| | ||||| |||| |||| ||||    
T  23297498 ataaactaccttgacaaacttatgaataatacataaaagcttatttatttgcataagctattttgcataagctcaaaaataagccaatccaaa 23297406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 150 - 219
Target Start/End: Original strand, 27368178 - 27368247
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttattcattttcataaattgttttgcataa 219  Q
    |||| ||| |||||||||||||||||||||| ||||||||||||| |||| ||||| ||||||| |||||    
T  27368178 ataagctacattgacaaacttatgaataatatataaaagcttatttatttgcataagttgttttacataa 27368247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 150 - 246
Target Start/End: Complemental strand, 35124447 - 35124351
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttattcattttcataaattgttttgcataaacccaaaagtaagtcaattcaaatggg 246  Q
    ||||||||  ||||||| |||||||||| |||||||||| ||||  |||| |||||  |||||||||||| | ||||| ||||||||| ||||||||    
T  35124447 ataaactaccttgacaagcttatgaatagtacataaaaggttatatatttgcataagctgttttgcataagctcaaaaataagtcaatccaaatggg 35124351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 150 - 242
Target Start/End: Original strand, 43699509 - 43699601
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttattcattttcataaattgttttgcataaacccaaaagtaagtcaattcaaa 242  Q
    |||||||| |||||||| ||||||||||| ||||||||||||||| ||||  |||| ||||||| ||||| | ||||| |||| |||| ||||    
T  43699509 ataaactacattgacaagcttatgaataagacataaaagcttatttatttgtataagttgtttttcataagctcaaaaataagccaatccaaa 43699601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 150 - 206
Target Start/End: Original strand, 55638107 - 55638163
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttattcattttcataaa 206  Q
    |||||||||||| ||||||||||||||||||||||||||||| || |||| ||||||    
T  55638107 ataaactatatttacaaacttatgaataatacataaaagcttgtttatttgcataaa 55638163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 151 - 242
Target Start/End: Original strand, 43415316 - 43415407
Alignment:
Q  151 taaactatattgacaaacttatgaataatacataaaagcttattcattttcataaattgttttgcataaacccaaaagtaagtcaattcaaa 242  Q
    ||||||| ||| |||| |||||||||||||||||||| |||||| |||| || || ||||||| | ||| | ||||| ||||||||||||||    
T  43415316 taaactacattaacaaccttatgaataatacataaaaacttatttatttgcagaagttgttttacttaagctcaaaaataagtcaattcaaa 43415407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 161 - 218
Target Start/End: Complemental strand, 8130537 - 8130480
Alignment:
Q  161 tgacaaacttatgaataatacataaaagcttattcattttcataaattgttttgcata 218  Q
    ||||||||||||||||||| |||||||||||||| |||| |||||  |||||||||||    
T  8130537 tgacaaacttatgaataatgcataaaagcttatttatttgcataagctgttttgcata 8130480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 150 - 242
Target Start/End: Complemental strand, 33533988 - 33533896
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttattcattttcataaattgttttgcataaacccaaaagtaagtcaattcaaa 242  Q
    ||||||||  ||||| |||||||||||||||| |  ||||||||  |||| ||||| |||||||| |||||| ||||| ||||||||| ||||    
T  33533988 ataaactaccttgactaacttatgaataataccttgaagcttataaatttgcataagttgttttgtataaactcaaaattaagtcaatccaaa 33533896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 150 - 205
Target Start/End: Complemental strand, 897030 - 896975
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttattcattttcataa 205  Q
    |||||||| |||||||| ||||||||||||||||||||| ||||| |||| |||||    
T  897030 ataaactacattgacaagcttatgaataatacataaaagtttatttatttgcataa 896975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 160 - 215
Target Start/End: Original strand, 12495682 - 12495737
Alignment:
Q  160 ttgacaaacttatgaataatacataaaagcttattcattttcataaattgttttgc 215  Q
    ||||||| ||||||||||||||||||||||||||| |||| |||||  ||||||||    
T  12495682 ttgacaagcttatgaataatacataaaagcttatttatttgcataagctgttttgc 12495737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 150 - 205
Target Start/End: Complemental strand, 28074425 - 28074370
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttattcattttcataa 205  Q
    ||||||||  ||||||| ||||||||||||||||||||||||||| |||| |||||    
T  28074425 ataaactaccttgacaagcttatgaataatacataaaagcttatttatttgcataa 28074370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 219
Target Start/End: Original strand, 42611905 - 42611963
Alignment:
Q  162 gacaaacttatgaataatacata-aaagcttattcattttcataaattgttttgcataa 219  Q
    ||||| ||||||||||||||||| |||||||||| |||| ||||| |||||||||||||    
T  42611905 gacaagcttatgaataatacatataaagcttatttatttgcataagttgttttgcataa 42611963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 160 - 205
Target Start/End: Complemental strand, 7148822 - 7148777
Alignment:
Q  160 ttgacaaacttatgaataatacataaaagcttattcattttcataa 205  Q
    ||||||| ||||||||||||||||||||||||||| |||| |||||    
T  7148822 ttgacaagcttatgaataatacataaaagcttatttatttgcataa 7148777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 169 - 238
Target Start/End: Original strand, 43740120 - 43740189
Alignment:
Q  169 ttatgaataatacataaaagcttattcattttcataaattgttttgcataaacccaaaagtaagtcaatt 238  Q
    ||||||||||||  ||||| |||||| ||||||||||||||||||| |||||   |||| ||||||||||    
T  43740120 ttatgaataatatgtaaaaacttatttattttcataaattgttttgtataaatttaaaaataagtcaatt 43740189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 242
Target Start/End: Complemental strand, 34526323 - 34526248
Alignment:
Q  166 aacttatgaataatacataaaagcttattcattttcataaattgttttgcataaacccaaaagtaagtcaattcaaa 242  Q
    ||||||||||| | ||||||||||||||| |||| |||||| | |||| ||||| | | ||||||||||||||||||    
T  34526323 aacttatgaatta-acataaaagcttatttatttgcataaactatttttcataagctcgaaagtaagtcaattcaaa 34526248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 242
Target Start/End: Original strand, 38345863 - 38345939
Alignment:
Q  166 aacttatgaataatacataaaagcttattcattttcataaattgttttgcataaacccaaaagtaagtcaattcaaa 242  Q
    |||||||||||| |||||||||||||||| ||||  ||||  |||||||||||| | ||||  ||||||||| ||||    
T  38345863 aacttatgaatactacataaaagcttatttatttggataagctgttttgcataagctcaaacataagtcaatccaaa 38345939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 150 - 221
Target Start/End: Complemental strand, 35010271 - 35010200
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttattcattttcataaattgttttgcataaac 221  Q
    ||||||||  ||||||||||||| |||||||||||||| |||||| |||| | || ||| |||| |||||||    
T  35010271 ataaactacgttgacaaacttataaataatacataaaaacttatttatttacctatattattttccataaac 35010200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 38515689 - 38515747
Alignment:
Q  161 tgacaaacttatgaataatacataaaagcttattcattttcataaattgttttgcataa 219  Q
    |||||| ||||||||||||||||| | ||||||| |||  |||||| ||||||||||||    
T  38515689 tgacaagcttatgaataatacatagaggcttatttattcccataaactgttttgcataa 38515747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 219
Target Start/End: Original strand, 212974 - 213042
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttattcattttcataaattgttttgcataa 219  Q
    ||||||||  || |||| ||||||||||||| |||||| |||||| |||| ||||| |||||||||||||    
T  212974 ataaactaccttaacaagcttatgaataataaataaaa-cttatttatttgcataagttgttttgcataa 213042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 194
Target Start/End: Complemental strand, 4331397 - 4331353
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttatt 194  Q
    ||||||||  |||||||| |||||||||||| |||||||||||||    
T  4331397 ataaactaccttgacaaagttatgaataataaataaaagcttatt 4331353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 242
Target Start/End: Original strand, 10794959 - 10795027
Alignment:
Q  174 aataatacataaaagcttattcattttcataaattgttttgcataaacccaaaagtaagtcaattcaaa 242  Q
    |||||||||||||| |||||| |||| || ||  |||||||||||| | | ||| ||||||||||||||    
T  10794959 aataatacataaaaacttatttatttacacaagctgttttgcataagctctaaaataagtcaattcaaa 10795027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 242
Target Start/End: Complemental strand, 10796422 - 10796354
Alignment:
Q  174 aataatacataaaagcttattcattttcataaattgttttgcataaacccaaaagtaagtcaattcaaa 242  Q
    |||||||||||||| |||||| |||| || || ||||||||||||| | | ||| |||| |||||||||    
T  10796422 aataatacataaaaacttatttatttacacaagttgttttgcataagctctaaaataagccaattcaaa 10796354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 206
Target Start/End: Complemental strand, 46650331 - 46650275
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttattcattttcataaa 206  Q
    |||||||| | | ||||| ||||||||||||||| |||||||||| |||| ||||||    
T  46650331 ataaactacaattacaaatttatgaataatacatgaaagcttatttatttgcataaa 46650275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 48; Significance: 2e-18; HSPs: 24)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 151 - 242
Target Start/End: Complemental strand, 38372617 - 38372526
Alignment:
Q  151 taaactatattgacaaacttatgaataatacataaaagcttattcattttcataaattgttttgcataaacccaaaagtaagtcaattcaaa 242  Q
    |||||||  |||||||||||||||||||||||||| |||||||| |||| |||||  |||||||||||| | ||||| ||||||||| ||||    
T  38372617 taaactaccttgacaaacttatgaataatacataagagcttatttatttgcataagctgttttgcataagctcaaaaataagtcaatccaaa 38372526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 150 - 215
Target Start/End: Complemental strand, 34922991 - 34922926
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttattcattttcataaattgttttgc 215  Q
    ||||||||  ||||||||||||||||||||||||||||||||||| |||| ||||| |||||||||    
T  34922991 ataaactaccttgacaaacttatgaataatacataaaagcttatttatttgcataagttgttttgc 34922926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 165 - 238
Target Start/End: Complemental strand, 21249201 - 21249128
Alignment:
Q  165 aaacttatgaataatacataaaagcttattcattttcataaattgttttgcataaacccaaaagtaagtcaatt 238  Q
    ||||||||||||||||||||||| |||||| |||| ||||| | ||||||||||||| ||||| ||||| ||||    
T  21249201 aaacttatgaataatacataaaaacttatttatttgcataagtagttttgcataaacgcaaaaataagttaatt 21249128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 150 - 242
Target Start/End: Complemental strand, 30181610 - 30181518
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttattcattttcataaattgttttgcataaacccaaaagtaagtcaattcaaa 242  Q
    ||||||||  ||||||| |||||||||||||||||||||||| || |||| | ||| |||| |||||||| | ||||| ||||||||| ||||    
T  30181610 ataaactaccttgacaagcttatgaataatacataaaagcttctttatttgcctaagttgtattgcataagctcaaaaataagtcaatccaaa 30181518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 150 - 214
Target Start/End: Complemental strand, 41677434 - 41677370
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttattcattttcataaattgttttg 214  Q
    |||||||| |||||||||||||||||||||||||||||  ||||| |||| ||||| ||||||||    
T  41677434 ataaactacattgacaaacttatgaataatacataaaaatttatttatttgcataagttgttttg 41677370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 150 - 245
Target Start/End: Complemental strand, 24414583 - 24414488
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttattcattttcataaattgttttgcataaacccaaaagtaagtcaattcaaatgg 245  Q
    |||| |||| ||||||| |||||| |||||||||||| | ||||| |||| |||||||| |||||||||| | || || || ||||||||||||||    
T  24414583 ataagctatcttgacaagcttatggataatacataaatgtttatttatttacataaatttttttgcataacctcataaatacgtcaattcaaatgg 24414488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 163 - 219
Target Start/End: Complemental strand, 12473253 - 12473197
Alignment:
Q  163 acaaacttatgaataatacataaaagcttattcattttcataaattgttttgcataa 219  Q
    ||||||||||||||||||||||||| ||||||  ||| ||||| |||||||||||||    
T  12473253 acaaacttatgaataatacataaaaacttatttgtttgcataagttgttttgcataa 12473197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 151 - 219
Target Start/End: Original strand, 23119947 - 23120015
Alignment:
Q  151 taaactatattgacaaacttatgaataatacataaaagcttattcattttcataaattgttttgcataa 219  Q
    ||||||| ||||||||||||||||||||||| | |||| ||||| |||| ||||  |||||||||||||    
T  23119947 taaactacattgacaaacttatgaataatactttaaagattatttatttgcataggttgttttgcataa 23120015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 150 - 242
Target Start/End: Original strand, 29390576 - 29390668
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttattcattttcataaattgttttgcataaacccaaaagtaagtcaattcaaa 242  Q
    ||||||||  || |||| |||||||||||||||| |||| ||||| |||| ||||| ||||||| ||||||| ||||| |||| |||| ||||    
T  29390576 ataaactacctttacaagcttatgaataatacatcaaagattatttatttgcataagttgttttccataaactcaaaaataagccaatccaaa 29390668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 150 - 205
Target Start/End: Original strand, 42083443 - 42083498
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttattcattttcataa 205  Q
    ||||| |||||| ||||||||||||||||||||||||| |||||| |||| |||||    
T  42083443 ataaattatatttacaaacttatgaataatacataaaaacttatttatttacataa 42083498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 150 - 216
Target Start/End: Original strand, 7098126 - 7098192
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttattcattttcataaattgttttgca 216  Q
    ||||||||| |||||||||||||||||||| ||||||| |||||| ||||  ||||| | |||||||    
T  7098126 ataaactatcttgacaaacttatgaataattcataaaatcttatttatttgtataaactattttgca 7098192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 150 - 219
Target Start/End: Original strand, 44613499 - 44613568
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttattcattttcataaattgttttgcataa 219  Q
    ||||||||  || |||| ||||||||||||| ||||||||||||| |||| |||||  ||||||||||||    
T  44613499 ataaactaccttaacaagcttatgaataataaataaaagcttatttatttgcataagctgttttgcataa 44613568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 150 - 219
Target Start/End: Original strand, 48021673 - 48021742
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttattcattttcataaattgttttgcataa 219  Q
    ||||||||  || |||| ||||||||||||| |||| |||||||| |||| |||||||||||||| ||||    
T  48021673 ataaactactttaacaagcttatgaataataaataagagcttatttatttgcataaattgttttgtataa 48021742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 150 - 248
Target Start/End: Complemental strand, 14536942 - 14536844
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttattcattttcataaattgttttgcataaacccaaaagtaagtc-aattcaaatgggtc 248  Q
    ||||||||| ||||||| ||||||||||||||||||||  ||||| ||||  |||| |||||||  |||||  ||||| |||||| ||| ||||||||||    
T  14536942 ataaactatcttgacaatcttatgaataatacataaaa-attatttatttctataagttgtttttaataaattcaaaaataagtcaaatccaaatgggtc 14536844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 160 - 219
Target Start/End: Original strand, 23356527 - 23356586
Alignment:
Q  160 ttgacaaacttatgaataatacataaaagcttattcattttcataaattgttttgcataa 219  Q
    ||||||||||| ||||||||||| |||  |||||| |||||||||| |||||||| ||||    
T  23356527 ttgacaaacttgtgaataatacaaaaagccttatttattttcataagttgttttgtataa 23356586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 150 - 205
Target Start/End: Complemental strand, 29378705 - 29378650
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttattcattttcataa 205  Q
    ||||||||  |||||||||| || ||||||||||||||||||||| |||| |||||    
T  29378705 ataaactaccttgacaaactcataaataatacataaaagcttatttatttgcataa 29378650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 248
Target Start/End: Original strand, 22515565 - 22515631
Alignment:
Q  182 ataaaagcttattcattttcataaattgttttgcataaacccaaaagtaagtcaattcaaatgggtc 248  Q
    ||||||||||||| ||||||||||  | |||||||||| | ||||  ||||||||| ||||||||||    
T  22515565 ataaaagcttatttattttcataatatattttgcataagctcaaatataagtcaatccaaatgggtc 22515631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 150 - 220
Target Start/End: Complemental strand, 39803084 - 39803014
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttattcattttcataaattgttttgcataaa 220  Q
    |||||| || ||||||||||||| || |||| | ||||||| ||| |||||||||| || |||||||||||    
T  39803084 ataaacaatgttgacaaacttataaacaatagaaaaaagctcatttattttcataatttattttgcataaa 39803014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 205
Target Start/End: Complemental strand, 47511090 - 47511048
Alignment:
Q  163 acaaacttatgaataatacataaaagcttattcattttcataa 205  Q
    |||| ||||||||||||||||||||||||||| |||| |||||    
T  47511090 acaagcttatgaataatacataaaagcttatttatttgcataa 47511048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 191
Target Start/End: Original strand, 14691325 - 14691366
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagctt 191  Q
    ||||| || |||||||| ||||||||||||||||||||||||    
T  14691325 ataaattacattgacaagcttatgaataatacataaaagctt 14691366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 205
Target Start/End: Original strand, 33288135 - 33288180
Alignment:
Q  160 ttgacaaacttatgaataatacataaaagcttattcattttcataa 205  Q
    ||||||| || |||||||||||||||||||||||| |||| |||||    
T  33288135 ttgacaagctaatgaataatacataaaagcttatttatttgcataa 33288180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 163 - 219
Target Start/End: Original strand, 9546423 - 9546479
Alignment:
Q  163 acaaacttatgaataatacataaaagcttattcattttcataaattgttttgcataa 219  Q
    ||||| |||||||||||||||||||  ||||| |||| |||||||| |||| |||||    
T  9546423 acaaatttatgaataatacataaaactttatttatttgcataaattattttacataa 9546479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 206
Target Start/End: Original strand, 22319317 - 22319373
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttattcattttcataaa 206  Q
    ||||||||| || ||||||||||||||||||||| || | ||||| |||| ||||||    
T  22319317 ataaactatgttaacaaacttatgaataatacattaatgtttatttatttgcataaa 22319373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 242
Target Start/End: Original strand, 40629443 - 40629534
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttattcattttcataaattgttttgcataaacccaaaagtaagtcaattcaaa 242  Q
    ||||||||  ||||||| |||||||||||||||| |||| ||||| ||||  ||||  |||||||||||| | ||||| |||| |||| ||||    
T  40629443 ataaactaccttgacaagcttatgaataatacat-aaagtttatttatttggataagctgttttgcataagctcaaaaataagccaatccaaa 40629534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 48; Significance: 2e-18; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 150 - 237
Target Start/End: Complemental strand, 42852082 - 42851995
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttattcattttcataaattgttttgcataaacccaaaagtaagtcaat 237  Q
    ||||||||| ||||||| ||||||||||||||||||||||||||| ||||  ||||  |||||||||||| ||||||| |||| ||||    
T  42852082 ataaactatcttgacaagcttatgaataatacataaaagcttatttatttgaataagctgttttgcataagcccaaaaataagccaat 42851995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 150 - 245
Target Start/End: Complemental strand, 11991365 - 11991270
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttattcattttcataaattgttttgcataaacccaaaagtaagtcaattcaaatgg 245  Q
    |||||| ||||| |||| ||||| ||||||||||||||||||||| |||| ||||| ||||||||||||| |   ||| ||||||||| |||||||    
T  11991365 ataaaccatatttacaagcttataaataatacataaaagcttatttatttacataagttgttttgcataagcattaaaataagtcaatccaaatgg 11991270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 150 - 232
Target Start/End: Original strand, 22201962 - 22202044
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttattcattttcataaattgttttgcataaacccaaaagtaag 232  Q
    ||||||||  ||||||| ||||||||||||||||||||||||||| |||| |||||  |||||||||||| | ||||| ||||    
T  22201962 ataaactaccttgacaagcttatgaataatacataaaagcttatttatttacataagctgttttgcataagctcaaaaataag 22202044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 150 - 219
Target Start/End: Original strand, 29922215 - 29922284
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttattcattttcataaattgttttgcataa 219  Q
    ||||||||  ||||||| |||||||||||||||||||| |||||| |||| |||||| ||||||||||||    
T  29922215 ataaactaccttgacaagcttatgaataatacataaaaacttatttatttgcataaactgttttgcataa 29922284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 169 - 237
Target Start/End: Complemental strand, 17128319 - 17128251
Alignment:
Q  169 ttatgaataatacataaaagcttattcattttcataaattgttttgcataaacccaaaagtaagtcaat 237  Q
    |||||||||||||||||||||||||| |||| |||||  |||||||||||| | ||||| |||||||||    
T  17128319 ttatgaataatacataaaagcttatttatttgcataagctgttttgcataagctcaaaaataagtcaat 17128251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 150 - 242
Target Start/End: Complemental strand, 6150437 - 6150349
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttattcattttcataaattgttttgcataaacccaaaagtaagtcaattcaaa 242  Q
    ||||||||  |||||||||||||||||||||||||||| |    |||||| |||||  |||||||||||||| ||||| ||||| ||||||||    
T  6150437 ataaactaccttgacaaacttatgaataatacataaaacc----tcatttgcataagctgttttgcataaactcaaaaataagtgaattcaaa 6150349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 150 - 219
Target Start/End: Original strand, 2878702 - 2878771
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttattcattttcataaattgttttgcataa 219  Q
    |||||| | |||||||||||||||||||||| ||||||||||||| |||| |||||  ||||| ||||||    
T  2878702 ataaaccacattgacaaacttatgaataatagataaaagcttatttatttgcataagctgtttagcataa 2878771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 150 - 219
Target Start/End: Original strand, 10537245 - 10537314
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttattcattttcataaattgttttgcataa 219  Q
    ||||||||| ||||||| ||||| ||||||||||||||||||||| |||| |||||  |||||| |||||    
T  10537245 ataaactatcttgacaagcttataaataatacataaaagcttatttatttgcataagctgttttacataa 10537314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 150 - 227
Target Start/End: Complemental strand, 12467324 - 12467247
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttattcattttcataaattgttttgcataaacccaaaa 227  Q
    ||||||||  ||||||| ||||||||||||||||||||||||||| |||| |||||  | ||||| |||||| |||||    
T  12467324 ataaactaccttgacaagcttatgaataatacataaaagcttatttatttgcataacattttttgaataaactcaaaa 12467247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 150 - 219
Target Start/End: Complemental strand, 43010695 - 43010626
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttattcattttcataaattgttttgcataa 219  Q
    |||||||| | |||||||| ||||||||||||||||||| ||||| |||| ||||| ||||||| |||||    
T  43010695 ataaactacaatgacaaacgtatgaataatacataaaagtttatttatttacataagttgttttacataa 43010626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 150 - 242
Target Start/End: Original strand, 1372019 - 1372111
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttattcattttcataaattgttttgcataaacccaaaagtaagtcaattcaaa 242  Q
    |||||| | ||| |||| ||||| |||||||||||||||  |||| |||| |||||| |||||||||||| | ||||| ||||||||| ||||    
T  1372019 ataaaccacatttacaagcttataaataatacataaaagtgtatttatttacataaactgttttgcataagctcaaaaataagtcaatccaaa 1372111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 166 - 246
Target Start/End: Complemental strand, 14243867 - 14243787
Alignment:
Q  166 aacttatgaataatacataaaagcttattcattttcataaattgttttgcataaacccaaaagtaagtcaattcaaatggg 246  Q
    |||||||||||| |||||| ||||||||| |||| |||||  |||||||||||| | ||||| ||||||||| ||| ||||    
T  14243867 aacttatgaatattacatagaagcttatttatttacataagctgttttgcataatctcaaaaataagtcaatccaagtggg 14243787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 160 - 211
Target Start/End: Complemental strand, 1473406 - 1473355
Alignment:
Q  160 ttgacaaacttatgaataatacataaaagcttattcattttcataaattgtt 211  Q
    ||||||| ||||||||||||||||||||||||||| |||| ||||| |||||    
T  1473406 ttgacaagcttatgaataatacataaaagcttatttatttgcataagttgtt 1473355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 151 - 242
Target Start/End: Original strand, 3520530 - 3520620
Alignment:
Q  151 taaactatattgacaaacttatgaataatacataaaagcttattcattttcataaattgttttgcataaacccaaaagtaagtcaattcaaa 242  Q
    |||||||  ||||||| |||||||||||||| |||||| ||||| |||| |||||| |||||||||||| |  |||| ||||||||| ||||    
T  3520530 taaactaccttgacaagcttatgaataatac-taaaaggttatttatttacataaactgttttgcataagctaaaaaataagtcaatccaaa 3520620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 163 - 246
Target Start/End: Original strand, 42558759 - 42558841
Alignment:
Q  163 acaaacttatgaataatacataaaagcttattcattttcataaattgttttgcataaacccaaaagtaagtcaattcaaatggg 246  Q
    ||||||||||||||| ||| |||||||||||| |||  |||||  |||||||||| || |||||| ||||||||| ||||||||    
T  42558759 acaaacttatgaatagtacgtaaaagcttatttattcacataagctgttttgcat-aatccaaaaataagtcaatccaaatggg 42558841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 150 - 244
Target Start/End: Complemental strand, 2670135 - 2670041
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttattcattttcataaattgttttgcataaacccaaaagtaagtcaattcaaatg 244  Q
    ||||||||  |||||||||||||||||| |||||||||| || || |||| |||||| |||||| ||||| | |||||  |||  ||||||||||    
T  2670135 ataaactaccttgacaaacttatgaatagtacataaaagattgtttatttgcataaactgttttacataagctcaaaaacaagcgaattcaaatg 2670041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 151 - 205
Target Start/End: Complemental strand, 41534682 - 41534628
Alignment:
Q  151 taaactatattgacaaacttatgaataatacataaaagcttattcattttcataa 205  Q
    |||||||  ||||||| ||||||||||||||||||||||||||| |||| |||||    
T  41534682 taaactaccttgacaagcttatgaataatacataaaagcttatttatttgcataa 41534628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 160 - 217
Target Start/End: Complemental strand, 7984155 - 7984098
Alignment:
Q  160 ttgacaaacttatgaataatacataaaagcttattcattttcataaattgttttgcat 217  Q
    |||||||||||||||||||||||||||| |||| | |||| ||||| ||||| |||||    
T  7984155 ttgacaaacttatgaataatacataaaaacttagttatttgcataagttgttatgcat 7984098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 150 - 219
Target Start/End: Original strand, 12987040 - 12987109
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttattcattttcataaattgttttgcataa 219  Q
    ||||||||  ||||||| |||||||| |||||||||||||||||| |||| ||||| || |||| |||||    
T  12987040 ataaactaccttgacaagcttatgaacaatacataaaagcttatttatttgcataagttcttttacataa 12987109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 150 - 219
Target Start/End: Original strand, 13060628 - 13060697
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttattcattttcataaattgttttgcataa 219  Q
    ||||||||  ||||||| |||||||| |||||||||||||||||| |||| ||||| || |||| |||||    
T  13060628 ataaactaccttgacaagcttatgaacaatacataaaagcttatttatttgcataagttcttttacataa 13060697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 150 - 219
Target Start/End: Complemental strand, 22573713 - 22573644
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttattcattttcataaattgttttgcataa 219  Q
    |||||||| ||| |||||||||| ||||||||| |||| || ||| |||| ||||| |||||||||||||    
T  22573713 ataaactacatttacaaacttataaataatacaaaaaaactcatttatttgcataagttgttttgcataa 22573644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 150 - 199
Target Start/End: Complemental strand, 24030275 - 24030226
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttattcattt 199  Q
    ||||||||  ||||||| ||||||||||||||||||||||||||| ||||    
T  24030275 ataaactactttgacaagcttatgaataatacataaaagcttatttattt 24030226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 242
Target Start/End: Complemental strand, 1576690 - 1576599
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttattcattttcataaattgttttgcataaacccaaaagtaagtcaattcaaa 242  Q
    |||||||| |||||||| |||||||| |||||||||||| ||||| |||| | |||  |||||||||||| ||||| | |||| |||| ||||    
T  1576690 ataaactacattgacaagcttatgaa-aatacataaaagtttatttatttgcttaagctgttttgcataagcccaagaataagccaatccaaa 1576599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 242
Target Start/End: Original strand, 1608125 - 1608216
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttattcattttcataaattgttttgcataaacccaaaagtaagtcaattcaaa 242  Q
    |||||||| |||||||| |||||||| |||||||||||| ||||| |||| | |||  |||||||||||| ||||| | |||| |||| ||||    
T  1608125 ataaactacattgacaagcttatgaa-aatacataaaagtttatttatttgcttaagctgttttgcataagcccaagaataagccaatccaaa 1608216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 242
Target Start/End: Original strand, 11163307 - 11163387
Alignment:
Q  162 gacaaacttatgaataatacataaaagcttattcattttcataaattgttttgcataaacccaaaagtaagtcaattcaaa 242  Q
    ||||| ||||||||| |||||||||| |||||| |||| |||||  |||||||||||| |  |||| ||||||||| ||||    
T  11163307 gacaagcttatgaatcatacataaaaacttattgatttacataagctgttttgcataagctaaaaaataagtcaatccaaa 11163387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 163 - 219
Target Start/End: Complemental strand, 26003044 - 26002988
Alignment:
Q  163 acaaacttatgaataatacataaaagcttattcattttcataaattgttttgcataa 219  Q
    |||||||||| |||||||||||||| |||||| |||| |||||| ||||||| ||||    
T  26003044 acaaacttataaataatacataaaaacttatttatttgcataaactgttttgtataa 26002988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 150 - 205
Target Start/End: Complemental strand, 17657302 - 17657247
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttattcattttcataa 205  Q
    |||||||| | || ||| ||||||||||||||||||||||||||| |||| |||||    
T  17657302 ataaactacaatggcaagcttatgaataatacataaaagcttatttatttgcataa 17657247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 150 - 205
Target Start/End: Complemental strand, 28625540 - 28625485
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttattcattttcataa 205  Q
    ||||||||  ||||||| |||||||||||||| |||||||||||| |||| |||||    
T  28625540 ataaactaccttgacaagcttatgaataatacttaaaagcttatttatttgcataa 28625485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 150 - 205
Target Start/End: Original strand, 40452504 - 40452559
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttattcattttcataa 205  Q
    ||||||||  ||||||| |||||||||||| ||||||||||||||| ||| |||||    
T  40452504 ataaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcataa 40452559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 150 - 205
Target Start/End: Complemental strand, 42706856 - 42706801
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttattcattttcataa 205  Q
    ||||||||  ||||||| |||||||||||||| |||||||||||| |||| |||||    
T  42706856 ataaactaccttgacaagcttatgaataatacttaaaagcttatttatttgcataa 42706801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 160 - 194
Target Start/End: Original strand, 31637130 - 31637164
Alignment:
Q  160 ttgacaaacttatgaataatacataaaagcttatt 194  Q
    ||||||| |||||||||||||||||||||||||||    
T  31637130 ttgacaagcttatgaataatacataaaagcttatt 31637164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 227
Target Start/End: Original strand, 40152902 - 40152979
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttattcattttcataaattgttttgcataaacccaaaa 227  Q
    ||||||||| || ||||| ||||| |||||| |||||| |||||| ||||  ||||||||||||  |||||| |||||    
T  40152902 ataaactatcttaacaaatttatggataataaataaaaacttatttatttatataaattgttttagataaactcaaaa 40152979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 199
Target Start/End: Original strand, 43265967 - 43266016
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttattcattt 199  Q
    ||||||||| || |||| ||||||||| ||||||||||||||||| ||||    
T  43265967 ataaactatcttaacaagcttatgaatgatacataaaagcttatttattt 43266016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 219
Target Start/End: Complemental strand, 43319063 - 43318994
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttattcattttcataaattgttttgcataa 219  Q
    |||||||| ||| |||| ||||| |||||||||||||  | |||| |||| ||||| |||||||||||||    
T  43319063 ataaactacattaacaagcttataaataatacataaagacatatttatttgcataagttgttttgcataa 43318994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 194
Target Start/End: Complemental strand, 1868906 - 1868862
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttatt 194  Q
    ||||||||  ||||||| ||| |||||||||||||||||||||||    
T  1868906 ataaactaccttgacaagcttgtgaataatacataaaagcttatt 1868862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 237
Target Start/End: Original strand, 27981957 - 27982025
Alignment:
Q  169 ttatgaataatacataaaagcttattcattttcataaattgttttgcataaacccaaaagtaagtcaat 237  Q
    |||||||||||||||||||  ||||| ||||||||||  ||||||| ||||   ||||| |||||||||    
T  27981957 ttatgaataatacataaaaatttatttattttcataagatgttttgtataagttcaaaaataagtcaat 27982025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 218
Target Start/End: Complemental strand, 30852231 - 30852163
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttattcattttcataaattgttttgcata 218  Q
    |||||||| ||| || ||||||| ||||||||||||||| ||||| |||| |||||  |||||| ||||    
T  30852231 ataaactacatttacgaacttattaataatacataaaagtttatttatttgcataatctgttttacata 30852163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 46; Significance: 4e-17; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 150 - 219
Target Start/End: Original strand, 34913416 - 34913485
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttattcattttcataaattgttttgcataa 219  Q
    ||||||||| || |||||||||||||||||||||||||||||||| |||| |||||  ||||||||||||    
T  34913416 ataaactatcttaacaaacttatgaataatacataaaagcttatttatttgcataagctgttttgcataa 34913485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 150 - 227
Target Start/End: Complemental strand, 21788517 - 21788440
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttattcattttcataaattgttttgcataaacccaaaa 227  Q
    ||||||||| || |||| ||||||||||||| ||||||||||||| |||| |||||  |||||||||||||| |||||    
T  21788517 ataaactatcttaacaagcttatgaataataaataaaagcttatttatttgcataagatgttttgcataaactcaaaa 21788440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 150 - 219
Target Start/End: Original strand, 33321338 - 33321407
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttattcattttcataaattgttttgcataa 219  Q
    ||||||||  ||||||| ||||||||||| ||||||||||||||| |||| || || |||||||||||||    
T  33321338 ataaactaccttgacaagcttatgaataagacataaaagcttatttatttgcacaagttgttttgcataa 33321407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 150 - 246
Target Start/End: Original strand, 25836738 - 25836834
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttattcattttcataaattgttttgcataaacccaaaagtaagtcaattcaaatggg 246  Q
    ||||||||  ||||||| |||||||||||||||||||||| |||| |||| |||||  ||||||||  |  | ||||| |||| |||||||||||||    
T  25836738 ataaactaccttgacaagcttatgaataatacataaaagcatatttatttgcataagctgttttgcgcaggctcaaaaataaggcaattcaaatggg 25836834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 150 - 218
Target Start/End: Complemental strand, 37409703 - 37409635
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttattcattttcataaattgttttgcata 218  Q
    |||||||| |||||||||||   ||||||||| |||||||||||| |||| ||||| ||||||||||||    
T  37409703 ataaactacattgacaaactagagaataatacttaaaagcttatttatttgcataagttgttttgcata 37409635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 150 - 245
Target Start/End: Complemental strand, 4026985 - 4026891
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttattcattttcataaattgttttgcataaacccaaaagtaagtcaattcaaatgg 245  Q
    ||||||||  ||||||| ||||||| ||||||||||||||||||| |||| |||||   ||||||||||| | ||||| |||| ||| ||||||||    
T  4026985 ataaactaccttgacaagcttatga-taatacataaaagcttatttatttgcataagcagttttgcataagctcaaaaataagccaaatcaaatgg 4026891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 150 - 237
Target Start/End: Original strand, 33321429 - 33321516
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttattcattttcataaattgttttgcataaacccaaaagtaagtcaat 237  Q
    ||||||||  ||||||| ||||||| |||||||||||| |||| | |||| ||||| ||||||||||||| |  |||| |||||||||    
T  33321429 ataaactaccttgacaagcttatgagtaatacataaaaacttaattatttgcataagttgttttgcataagctaaaaaataagtcaat 33321516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 161 - 206
Target Start/End: Original strand, 29133704 - 29133749
Alignment:
Q  161 tgacaaacttatgaataatacataaaagcttattcattttcataaa 206  Q
    |||||||||||||||||||||||||||| ||||| |||| ||||||    
T  29133704 tgacaaacttatgaataatacataaaagattatttatttgcataaa 29133749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 160 - 240
Target Start/End: Complemental strand, 4090539 - 4090459
Alignment:
Q  160 ttgacaaacttatgaataatacataaaagcttattcattttcataaattgttttgcataaacccaaaagtaagtcaattca 240  Q
    |||||||  ||||||||||||||| |||| ||||| |||| |||||  |||||||||||| | ||||| |||| |||||||    
T  4090539 ttgacaagattatgaataatacatcaaagtttatttatttgcataagctgttttgcataagctcaaaaataagccaattca 4090459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 246
Target Start/End: Original strand, 37419990 - 37420085
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttattcattttcataaattgttttgcataaacccaaaagtaagtcaattcaaatggg 246  Q
    ||||||||  |||||||| |||||||| | ||||||||||||||| |||| |||||||| |||| ||||| |  |||| |||| |||| ||||||||    
T  37419990 ataaactaccttgacaaaattatgaatta-acataaaagcttatttatttgcataaattatttttcataagctaaaaaataagccaatccaaatggg 37420085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 194
Target Start/End: Original strand, 42839346 - 42839390
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttatt 194  Q
    ||||||||  |||||||||||||||||||||||||||| ||||||    
T  42839346 ataaactaacttgacaaacttatgaataatacataaaaacttatt 42839390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 150 - 205
Target Start/End: Complemental strand, 887472 - 887417
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttattcattttcataa 205  Q
    ||||||||  ||||||| ||||||||||||||| ||||||||||| |||| |||||    
T  887472 ataaactaccttgacaagcttatgaataatacaaaaaagcttatttatttgcataa 887417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 168 - 219
Target Start/End: Original strand, 27703502 - 27703553
Alignment:
Q  168 cttatgaataatacataaaagcttattcattttcataaattgttttgcataa 219  Q
    ||||||||||||| ||||||||||||| |||| |||||  ||||||||||||    
T  27703502 cttatgaataatatataaaagcttatttatttgcataagctgttttgcataa 27703553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 160 - 199
Target Start/End: Complemental strand, 35731188 - 35731149
Alignment:
Q  160 ttgacaaacttatgaataatacataaaagcttattcattt 199  Q
    |||||||||| |||||||||||||||||||||||| ||||    
T  35731188 ttgacaaactcatgaataatacataaaagcttatttattt 35731149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 150 - 216
Target Start/End: Complemental strand, 5516135 - 5516069
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttattcattttcataaattgttttgca 216  Q
    |||||||| ||| |||||||||||||||| ||||| |||||||||  ||| |||||  |||||||||    
T  5516135 ataaactacatttacaaacttatgaataacacatagaagcttatttttttacataagctgttttgca 5516069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 150 - 192
Target Start/End: Complemental strand, 12442873 - 12442831
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagctta 192  Q
    ||||||||| ||||||| |||||||||||||| ||||||||||    
T  12442873 ataaactatcttgacaagcttatgaataatacctaaaagctta 12442831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 219
Target Start/End: Complemental strand, 15155854 - 15155804
Alignment:
Q  169 ttatgaataatacataaaagcttattcattttcataaattgttttgcataa 219  Q
    |||| |||||||||||||||| |||| |||||||||| ||||||| |||||    
T  15155854 ttataaataatacataaaagcatatttattttcataagttgttttacataa 15155804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 150 - 184
Target Start/End: Complemental strand, 33555719 - 33555685
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacata 184  Q
    |||||||||||| ||||||||||||||||||||||    
T  33555719 ataaactatatttacaaacttatgaataatacata 33555685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 151 - 242
Target Start/End: Complemental strand, 38216078 - 38215991
Alignment:
Q  151 taaactatattgacaaacttatgaataatacataaaagcttattcattttcataaattgttttgcataaacccaaaagtaagtcaattcaaa 242  Q
    |||||||  ||||||| ||||||||||||||||||    ||||| |||| |||||  |||||||||||| | ||||| ||||||||| ||||    
T  38216078 taaactaccttgacaagcttatgaataatacataa----ttatttatttgcataagctgttttgcataagctcaaaaataagtcaatccaaa 38215991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 219
Target Start/End: Complemental strand, 8441533 - 8441464
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttattcattttcataaattgttttgcataa 219  Q
    |||||||| ||| |||||||||| |||||||||||||| | |||| |||| |||||  || |||||||||    
T  8441533 ataaactacattaacaaacttataaataatacataaaaacatatttatttgcataagctgctttgcataa 8441464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 243
Target Start/End: Original strand, 35515506 - 35515599
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttattcattttcataaattgttttgcataaacccaaaagtaagtcaattcaaat 243  Q
    |||||||| ||| |||||||||| |||||||||||||  | |||| |||| | |||| |||||| ||||| | | ||| |||| ||||||||||    
T  35515506 ataaactacattaacaaacttataaataatacataaagacatatttatttacgtaaactgttttacataagctctaaaataagccaattcaaat 35515599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 163 - 219
Target Start/End: Original strand, 755781 - 755837
Alignment:
Q  163 acaaacttatgaataatacataaaagcttattcattttcataaattgttttgcataa 219  Q
    |||| ||| ||||||||||||||||||||| | |||| | ||| |||||||||||||    
T  755781 acaagcttctgaataatacataaaagcttaattatttgcgtaagttgttttgcataa 755837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 45; Significance: 1e-16; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 150 - 242
Target Start/End: Complemental strand, 21296826 - 21296734
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttattcattttcataaattgttttgcataaacccaaaagtaagtcaattcaaa 242  Q
    ||||||||  |||| |||| ||||||||||| |||||| |||||| |||| ||||||||||||||||||| | ||||| ||||||||| ||||    
T  21296826 ataaactaccttgataaacgtatgaataatagataaaaacttatttatttgcataaattgttttgcataatctcaaaaataagtcaatccaaa 21296734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 150 - 237
Target Start/End: Original strand, 40581103 - 40581190
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttattcattttcataaattgttttgcataaacccaaaagtaagtcaat 237  Q
    ||||||||  ||||||| ||||| ||||||||||||||||||||| |||| ||||| ||||||||||||| | ||||  |||||||||    
T  40581103 ataaactaccttgacaagcttattaataatacataaaagcttatttatttgcataagttgttttgcataagctcaaagataagtcaat 40581190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 150 - 219
Target Start/End: Complemental strand, 7292740 - 7292671
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttattcattttcataaattgttttgcataa 219  Q
    |||||||||||||||||||||||||||||||||||| |||||||  |||| ||||| ||| ||| |||||    
T  7292740 ataaactatattgacaaacttatgaataatacataagagcttatgtatttgcataagttgctttacataa 7292671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 150 - 219
Target Start/End: Complemental strand, 11528951 - 11528882
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttattcattttcataaattgttttgcataa 219  Q
    |||||||| ||| ||||| |||||||||||||||||||||||||| | || ||||| |||||||||||||    
T  11528951 ataaactacattaacaaatttatgaataatacataaaagcttatttacttacataagttgttttgcataa 11528882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 150 - 242
Target Start/End: Original strand, 22809219 - 22809312
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaa-gcttattcattttcataaattgttttgcataaacccaaaagtaagtcaattcaaa 242  Q
    ||||||||  ||||||| ||||||||||||| |||||| ||||||| |||| |||||  |||||||||||| | ||||| ||||||||||||||    
T  22809219 ataaactaccttgacaagcttatgaataatatataaaaagcttatttatttgcataagctgttttgcataacctcaaaaataagtcaattcaaa 22809312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 150 - 242
Target Start/End: Complemental strand, 29270421 - 29270329
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttattcattttcataaattgttttgcataaacccaaaagtaagtcaattcaaa 242  Q
    ||||| ||| |||| || ||||||||||||||||||||||||||| |||   |||| ||||||||||||| | ||||| ||||||||| ||||    
T  29270421 ataaattatcttgaaaagcttatgaataatacataaaagcttatttattcctataagttgttttgcataagctcaaaaataagtcaatccaaa 29270329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 150 - 242
Target Start/End: Original strand, 34707739 - 34707831
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttattcattttcataaattgttttgcataaacccaaaagtaagtcaattcaaa 242  Q
    ||||||||  || |||| ||||||||||||||||||||||||||  |||| | ||| ||||||||||||| | ||||| ||||||||| ||||    
T  34707739 ataaactaccttaacaagcttatgaataatacataaaagcttatatatttacgtaagttgttttgcataagctcaaaaataagtcaatccaaa 34707831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 150 - 242
Target Start/End: Original strand, 53218066 - 53218158
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttattcattttcataaattgttttgcataaacccaaaagtaagtcaattcaaa 242  Q
    ||||||||  ||||||| |||||||||||||||||||| |||||| |||  ||||| ||||||||||||| |  |||| ||||||||| ||||    
T  53218066 ataaactaccttgacaagcttatgaataatacataaaatcttatttattcgcataagttgttttgcataagctaaaaaataagtcaatccaaa 53218158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 150 - 218
Target Start/End: Original strand, 32901174 - 32901242
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttattcattttcataaattgttttgcata 218  Q
    ||||||||| || ||||| || ||||||||| ||||||||||||| |||| ||||| ||||||||||||    
T  32901174 ataaactatcttaacaaatttgtgaataataaataaaagcttatttatttacataagttgttttgcata 32901242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 150 - 214
Target Start/End: Original strand, 43971873 - 43971937
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttattcattttcataaattgttttg 214  Q
    ||||||||| || |||||||| ||||||||| ||||||||||||| |||| | ||||||||||||    
T  43971873 ataaactattttaacaaacttgtgaataataaataaaagcttatttatttacgtaaattgttttg 43971937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 168 - 242
Target Start/End: Complemental strand, 10272164 - 10272090
Alignment:
Q  168 cttatgaataatacataaaagcttattcattttcataaattgttttgcataaacccaaaagtaagtcaattcaaa 242  Q
    ||||||||||||||||||||| ||||| |||| ||| | ||||||||||||| |  |||| ||||||||| ||||    
T  10272164 cttatgaataatacataaaagtttatttatttgcatgagttgttttgcataagctaaaaaataagtcaatccaaa 10272090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 150 - 219
Target Start/End: Complemental strand, 10448834 - 10448765
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttattcattttcataaattgttttgcataa 219  Q
    |||||||| ||| |||| ||||| ||||||||||||| || |||| |||| ||||| |||||||||||||    
T  10448834 ataaactacattaacaagcttataaataatacataaaggcatatttatttgcataagttgttttgcataa 10448765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 150 - 199
Target Start/End: Complemental strand, 10521214 - 10521165
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttattcattt 199  Q
    |||||||| |||||||| ||||||||||||||||| ||||||||| ||||    
T  10521214 ataaactacattgacaagcttatgaataatacatataagcttatttattt 10521165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 150 - 199
Target Start/End: Complemental strand, 10667458 - 10667409
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttattcattt 199  Q
    |||||||| |||||||| ||||||||||||||||| ||||||||| ||||    
T  10667458 ataaactacattgacaagcttatgaataatacatataagcttatttattt 10667409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 160 - 213
Target Start/End: Original strand, 24842143 - 24842196
Alignment:
Q  160 ttgacaaacttatgaataatacataaaagcttattcattttcataaattgtttt 213  Q
    ||||||||||||||||||||||||||||  ||||| |||| ||||| |||||||    
T  24842143 ttgacaaacttatgaataatacataaaaatttatttatttgcataagttgtttt 24842196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 150 - 199
Target Start/End: Original strand, 52421167 - 52421216
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttattcattt 199  Q
    ||||||||  ||||||| ||||||||||||||||||||||||||| ||||    
T  52421167 ataaactaccttgacaagcttatgaataatacataaaagcttatttattt 52421216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 163 - 242
Target Start/End: Original strand, 5129916 - 5129995
Alignment:
Q  163 acaaacttatgaataatacataaaagcttattcattttcataaattgttttgcataaacccaaaagtaagtcaattcaaa 242  Q
    |||| |||||| |||||||| |||| ||||||  ||| ||||| ||||||||||||| |  |||| ||||||||||||||    
T  5129916 acaagcttatggataatacacaaaatcttatttgtttgcataatttgttttgcataagcttaaaaataagtcaattcaaa 5129995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 150 - 205
Target Start/End: Original strand, 43079960 - 43080015
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttattcattttcataa 205  Q
    ||||||||  ||||||| ||||||||||| ||||||||||||||| |||| |||||    
T  43079960 ataaactaccttgacaagcttatgaataacacataaaagcttatttatttgcataa 43080015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 150 - 205
Target Start/End: Complemental strand, 52021306 - 52021251
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttattcattttcataa 205  Q
    ||||||||  ||||||| |||||||||||||||||||||| |||| |||| |||||    
T  52021306 ataaactaccttgacaatcttatgaataatacataaaagcatatttatttgcataa 52021251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 213
Target Start/End: Complemental strand, 36266291 - 36266241
Alignment:
Q  163 acaaacttatgaataatacataaaagcttattcattttcataaattgtttt 213  Q
    |||||||||| ||||||||||||||| ||||| |||| |||||| ||||||    
T  36266291 acaaacttataaataatacataaaagtttatttatttgcataaactgtttt 36266241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 199
Target Start/End: Complemental strand, 3845915 - 3845866
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttattcattt 199  Q
    ||||||||  ||||||| ||||||||||||| ||||||||||||| ||||    
T  3845915 ataaactagcttgacaagcttatgaataatatataaaagcttatttattt 3845866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 242
Target Start/End: Complemental strand, 23555521 - 23555452
Alignment:
Q  173 gaataatacataaaagcttattcattttcataaattgttttgcataaacccaaaagtaagtcaattcaaa 242  Q
    |||||||||||||||||||||| |||| |||||| ||||| | |||| | ||||| |||| |||| ||||    
T  23555521 gaataatacataaaagcttatttatttgcataaactgtttcgtataagctcaaaaataagccaatccaaa 23555452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 227
Target Start/End: Complemental strand, 27769705 - 27769629
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttattcattttcataaattgttttgcataaacccaaaa 227  Q
    |||||||| |||||||| ||||| ||||||| | ||||| | ||| |||| ||||| ||||||||||||||| |||||    
T  27769705 ataaactacattgacaagcttataaataatata-aaaagttcatttatttgcataagttgttttgcataaactcaaaa 27769629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 165 - 213
Target Start/End: Original strand, 4257342 - 4257390
Alignment:
Q  165 aaacttatgaataatacataaaagcttattcattttcataaattgtttt 213  Q
    |||||||| |||||||||||||| |||||| |||| ||||| |||||||    
T  4257342 aaacttataaataatacataaaaacttatttatttgcataagttgtttt 4257390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 206
Target Start/End: Original strand, 5129841 - 5129897
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttattcattttcataaa 206  Q
    ||||| || |||||||| |||||||||||||||| ||| |||||| |||| ||||||    
T  5129841 ataaagtacattgacaagcttatgaataatacattaaaacttatttatttgcataaa 5129897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 206
Target Start/End: Original strand, 30198982 - 30199038
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttattcattttcataaa 206  Q
    |||||||| ||| || ||||||||||||| |||||||| |||||| |||| ||||||    
T  30198982 ataaactacatttactaacttatgaataacacataaaaacttatttatttgcataaa 30199038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 150 - 216
Target Start/End: Complemental strand, 30534040 - 30533974
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttattcattttcataaattgttttgca 216  Q
    |||||||| ||| |||||||||||||||||||||||||||||||| |||| |||||  |||||||||    
T  30534040 ataaactacatttacaaacttatgaataatacataaaagcttatttatttgcataagctgttttgca 30533974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 150 - 205
Target Start/End: Complemental strand, 10054441 - 10054386
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttattcattttcataa 205  Q
    |||||||| ||| |||||||||||||||||||||||||||||||| |||| |||||    
T  10054441 ataaactacatttacaaacttatgaataatacataaaagcttatttatttgcataa 10054386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 163 - 219
Target Start/End: Original strand, 2040225 - 2040281
Alignment:
Q  163 acaaacttatgaataatacataaaagcttattcattttcataaattgttttgcataa 219  Q
    |||||||||||||||||| ||||||||||||| ||||  |||| |||||||||||||    
T  2040225 acaaacttatgaataataaataaaagcttatttatttatataagttgttttgcataa 2040281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 150 - 205
Target Start/End: Original strand, 2034255 - 2034310
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttattcattttcataa 205  Q
    ||||||||  ||||||||||||| ||||||||||||||||||||| |||| |||||    
T  2034255 ataaactaccttgacaaacttataaataatacataaaagcttatttatttgcataa 2034310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 150 - 221
Target Start/End: Complemental strand, 4272442 - 4272371
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttattcattttcataaattgttttgcataaac 221  Q
    |||||||| ||| | ||||||||| |||||||||||||  ||||| |||| |||||||||||||| ||||||    
T  4272442 ataaactacatttataaacttatgtataatacataaaaagttatttatttgcataaattgttttgtataaac 4272371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 150 - 213
Target Start/End: Original strand, 22816611 - 22816674
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttattcattttcataaattgtttt 213  Q
    ||||| |||||| | ||||||||||||| ||||||||| |||||| |||| |||||||||||||    
T  22816611 ataaattatatttaaaaacttatgaatattacataaaaacttatttatttgcataaattgtttt 22816674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 150 - 216
Target Start/End: Original strand, 3211027 - 3211093
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttattcattttcataaattgttttgca 216  Q
    |||||||| |||||||| ||||| | ||||||||||||||||||| |||| |||||  |||||||||    
T  3211027 ataaactacattgacaagcttatcagtaatacataaaagcttatttatttgcataagctgttttgca 3211093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 161 - 246
Target Start/End: Original strand, 9201768 - 9201853
Alignment:
Q  161 tgacaaacttatgaataatacataaaagcttattcattttcataaattgttttgcataaacccaaaagtaagtcaattcaaatggg 246  Q
    |||||| |||||||||||||||  ||||||||||||||| |||||  |||||||| ||| | ||||| |||| ||||  |||||||    
T  9201768 tgacaagcttatgaataatacagcaaagcttattcatttgcataagctgttttgcgtaagctcaaaattaagccaatcaaaatggg 9201853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 150 - 219
Target Start/End: Original strand, 29623503 - 29623572
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttattcattttcataaattgttttgcataa 219  Q
    |||||||| ||| ||||||| || ||||||| ||||||| ||||| |||| ||||| |||||||||||||    
T  29623503 ataaactacattaacaaactcataaataataaataaaaggttatttatttgcataagttgttttgcataa 29623572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 150 - 191
Target Start/End: Complemental strand, 34509972 - 34509931
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagctt 191  Q
    |||||||  |||||||||||||||||||||||||||||||||    
T  34509972 ataaactccattgacaaacttatgaataatacataaaagctt 34509931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 160 - 199
Target Start/End: Original strand, 1240647 - 1240686
Alignment:
Q  160 ttgacaaacttatgaataatacataaaagcttattcattt 199  Q
    ||||||| ||||||||||||||||||||||||||| ||||    
T  1240647 ttgacaagcttatgaataatacataaaagcttatttattt 1240686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 150 - 205
Target Start/End: Original strand, 2027202 - 2027257
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttattcattttcataa 205  Q
    ||||||| | ||||||||||| |||||||| |||||||||||||| |||| |||||    
T  2027202 ataaactgtcttgacaaacttctgaataatgcataaaagcttatttatttgcataa 2027257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 150 - 205
Target Start/End: Original strand, 12817118 - 12817173
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttattcattttcataa 205  Q
    |||||||| |||||| | |||||||||||||||| |||||||||| |||| |||||    
T  12817118 ataaactacattgactagcttatgaataatacattaaagcttatttatttgcataa 12817173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 150 - 248
Target Start/End: Complemental strand, 8014848 - 8014751
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttattcattttcataaattgttttgcataaacccaaaagtaagtcaattcaaatgggtc 248  Q
    ||||||||  ||||||| ||||||||||||  ||||||||||| | |||| |||||  ||||||  |||||| ||||| |||| |||| ||||||||||    
T  8014848 ataaactaccttgacaagcttatgaataatgaataaaagcttacttatttgcataagctgttttctataaactcaaaa-taagccaatccaaatgggtc 8014751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 219
Target Start/End: Complemental strand, 6632719 - 6632650
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttattcattttcataaattgttttgcataa 219  Q
    |||||||| ||| ||||  |||| |||||||||||||||| |||| |||| ||||| |||||||| ||||    
T  6632719 ataaactacattaacaagtttataaataatacataaaagcatatttatttgcataagttgttttgaataa 6632650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 219
Target Start/End: Complemental strand, 6758687 - 6758618
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttattcattttcataaattgttttgcataa 219  Q
    ||||||||  || |||| |||||| |||||| | ||||||||||| |||| ||||| |||||||||||||    
T  6758687 ataaactaccttaacaagcttatggataataaacaaaagcttatttatttgcataagttgttttgcataa 6758618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 205
Target Start/End: Original strand, 10755316 - 10755361
Alignment:
Q  160 ttgacaaacttatgaataatacataaaagcttattcattttcataa 205  Q
    ||||||| |||||||||||||| |||||||||||| |||| |||||    
T  10755316 ttgacaagcttatgaataatacgtaaaagcttatttatttgcataa 10755361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 163 - 219
Target Start/End: Complemental strand, 2255781 - 2255725
Alignment:
Q  163 acaaacttatgaataatacataaaagcttattcattttcataaattgttttgcataa 219  Q
    |||| ||||||||| ||||||||||||| ||| |||| ||||| | |||||||||||    
T  2255781 acaagcttatgaatcatacataaaagctcatttatttgcataagtcgttttgcataa 2255725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 194
Target Start/End: Complemental strand, 7267835 - 7267791
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttatt 194  Q
    ||||||||  ||| ||| |||||||||||||||||||||||||||    
T  7267835 ataaactaccttggcaagcttatgaataatacataaaagcttatt 7267791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 242
Target Start/End: Original strand, 10658304 - 10658364
Alignment:
Q  182 ataaaagcttattcattttcataaattgttttgcataaacccaaaagtaagtcaattcaaa 242  Q
    ||||||||||||| |||| ||| |||| |||| ||||||| ||||| |||| |||||||||    
T  10658304 ataaaagcttatttatttgcattaattatttttcataaactcaaaaataagacaattcaaa 10658364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 242
Target Start/End: Complemental strand, 24625911 - 24625819
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttattcattttcataaattgttttgcataaacccaaaagtaagtcaattcaaa 242  Q
    ||||||||  || |||| |||||||||||||||||||||| |||| |||| ||||  |||| |||| ||| | ||||| |||| |||| ||||    
T  24625911 ataaactaccttaacaagcttatgaataatacataaaagcgtatttatttgcatatgttgtcttgcctaacctcaaaaataagacaatccaaa 24625819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 150 - 247
Target Start/End: Complemental strand, 18327584 - 18327487
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttattcattttcataaattgttttgcataaacccaaaagtaagtcaattcaaatgggt 247  Q
    ||||||||| ||||||| ||||||| ||||||||||||||||||| |||| |||||  ||||||| |||||  | ||| ||||||||| |||| ||||    
T  18327584 ataaactatcttgacaagcttatgagtaatacataaaagcttatttatttgcataagctgttttgaataaattccaaaataagtcaatccaaacgggt 18327487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 150 - 242
Target Start/End: Original strand, 1265719 - 1265811
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttattcattttcataaattgttttgcataaacccaaaagtaagtcaattcaaa 242  Q
    ||||||||  |||||||| ||||||||||||||||||| |||||   |||  |||| ||||||||||||| | ||||| ||||||||||||||    
T  1265719 ataaactaccttgacaaaattatgaataatacataaaatcttatctgtttgtataagttgttttgcataagctcaaaaataagtcaattcaaa 1265811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 150 - 219
Target Start/End: Complemental strand, 10365231 - 10365162
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttattcattttcataaattgttttgcataa 219  Q
    ||||||||  ||||||| ||||| ||||||||||||||| |||||||||| |||||||| |||| |||||    
T  10365231 ataaactactttgacaagcttattaataatacataaaagtttattcatttgcataaattattttacataa 10365162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 150 - 219
Target Start/End: Original strand, 10850097 - 10850166
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttattcattttcataaattgttttgcataa 219  Q
    ||||||||  ||||||| ||||||||||||||||||||||||||| |||| || ||| | ||||||||||    
T  10850097 ataaactacgttgacaaccttatgaataatacataaaagcttatttatttgcaaaaactattttgcataa 10850166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 150 - 219
Target Start/End: Complemental strand, 20169324 - 20169255
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttattcattttcataaattgttttgcataa 219  Q
    |||||||||||| | |||||||| ||||||||||||||||||||| |||| |||||  |||||| |||||    
T  20169324 ataaactatatttaaaaacttataaataatacataaaagcttatttatttgcataagctgtttttcataa 20169255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 150 - 242
Target Start/End: Complemental strand, 10082310 - 10082218
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttattcattttcataaattgttttgcataaacccaaaagtaagtcaattcaaa 242  Q
    ||||||||  ||||||||||||| ||||| |||||||| |||||| |||| ||||| ||||||  || |||| ||||| |||||| |||||||    
T  10082310 ataaactaccttgacaaacttatcaataacacataaaaacttatttatttgcataagttgtttcacaaaaactcaaaaataagtccattcaaa 10082218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 150 - 242
Target Start/End: Complemental strand, 37712127 - 37712036
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttattcattttcataaattgttttgcataaacccaaaagtaagtcaattcaaa 242  Q
    ||||||||  ||||||| |||||||||| ||||||||||||||||||||| |||||| |||||| ||| | | ||||| ||| ||||| ||||    
T  37712127 ataaactaccttgacaagcttatgaata-tacataaaagcttattcatttgcataaactgtttttcattagctcaaaaataaatcaatccaaa 37712036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 152 - 227
Target Start/End: Original strand, 49738328 - 49738404
Alignment:
Q  152 aaactatattgacaaacttatgaataatacataaaagc-ttattcattttcataaattgttttgcataaacccaaaa 227  Q
    ||||||| |||||||||||||||||||| ||||||| | || || |||||||||  ||||||||||||||| |||||    
T  49738328 aaactattttgacaaacttatgaataattcataaaaactttttttattttcatatgttgttttgcataaactcaaaa 49738404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 150 - 205
Target Start/End: Original strand, 6337782 - 6337837
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttattcattttcataa 205  Q
    ||||||||  ||||||| ||||||||||||||||||||||||||| |||| |||||    
T  6337782 ataaactaccttgacaagcttatgaataatacataaaagcttatttatttacataa 6337837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 150 - 246
Target Start/End: Complemental strand, 28690064 - 28689966
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagct--tattcattttcataaattgttttgcataaacccaaaagtaagtcaattcaaatggg 246  Q
    ||||||||  |||||||||||||||||||||||||||| ||  |||| |||| |||||  |||| |||||||||  |||| |||| |||| ||||||||    
T  28690064 ataaactaccttgacaaacttatgaataatacataaaaccttatatttatttgcataagctgttctgcataaactaaaaaataagccaatccaaatggg 28689966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 154 - 242
Target Start/End: Complemental strand, 391225 - 391136
Alignment:
Q  154 actatattgacaaacttatgaataatacataaaa-gcttattcattttcataaattgttttgcataaacccaaaagtaagtcaattcaaa 242  Q
    |||| |||||||| ||||||||||||| |||||| ||||||| |||| |||||  |||||||||||| | ||||| |||| |||| ||||    
T  391225 actacattgacaagcttatgaataatatataaaaagcttatttatttgcataagctgttttgcataacctcaaaaataagccaatccaaa 391136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 150 - 199
Target Start/End: Complemental strand, 4068175 - 4068126
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttattcattt 199  Q
    ||||||||  ||||||| ||||||||||||||||||||||||||| ||||    
T  4068175 ataaactaccttgacaagcttatgaataatacataaaagcttatttattt 4068126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 150 - 246
Target Start/End: Original strand, 26946130 - 26946227
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaa-gcttattcattttcataaattgttttgcataaacccaaaagtaagtcaattcaaatggg 246  Q
    ||||||||  || |||| ||||||||||| |||||||| ||||||| |||| |||||   ||||||||||| | ||||| ||||||||| ||||||||    
T  26946130 ataaactaccttaacaagcttatgaataacacataaaaagcttatttatttacataagccgttttgcataagctcaaaaataagtcaatccaaatggg 26946227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 160 - 237
Target Start/End: Complemental strand, 35590180 - 35590103
Alignment:
Q  160 ttgacaaacttatgaataatacataaaagcttattcattttcataaattgttttgcataaacccaaaagtaagtcaat 237  Q
    ||||||| ||||||||  ||||||||||||||||| |||| ||||| ||||||| ||||| |  |||| |||||||||    
T  35590180 ttgacaagcttatgaactatacataaaagcttatttatttgcataagttgttttacataagctaaaaaataagtcaat 35590103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 150 - 219
Target Start/End: Original strand, 35897649 - 35897718
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttattcattttcataaattgttttgcataa 219  Q
    ||||||||  |||| || ||||||||||||| |||||| |||||| |||| ||||| |||||||||||||    
T  35897649 ataaactactttgaaaagcttatgaataataaataaaaacttatttatttgcataagttgttttgcataa 35897718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 194
Target Start/End: Original strand, 15515373 - 15515417
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttatt 194  Q
    ||||||||  ||||||| |||||||||||||||||||||||||||    
T  15515373 ataaactaccttgacaagcttatgaataatacataaaagcttatt 15515417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 242
Target Start/End: Complemental strand, 16225553 - 16225477
Alignment:
Q  166 aacttatgaataatacataaaagcttattcattttcataaattgttttgcataaacccaaaagtaagtcaattcaaa 242  Q
    ||||||| | |||||||||||| |||||| |||| |||||| |||||||||||| | | ||| ||||||||| ||||    
T  16225553 aacttataattaatacataaaaacttatttatttacataaactgttttgcataagctctaaaataagtcaatccaaa 16225477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 160 - 216
Target Start/End: Complemental strand, 41003437 - 41003381
Alignment:
Q  160 ttgacaaacttatgaataatacataaaagcttattcattttcataaattgttttgca 216  Q
    ||||||||||||| |||||||||||||| |||||| |||| ||||| || |||||||    
T  41003437 ttgacaaacttataaataatacataaaaacttatttatttgcataagtttttttgca 41003381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 194
Target Start/End: Original strand, 41196736 - 41196780
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttatt 194  Q
    |||||||| |||||||| |||||||||||||||||||| ||||||    
T  41196736 ataaactacattgacaagcttatgaataatacataaaaacttatt 41196780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 150 - 213
Target Start/End: Complemental strand, 26543033 - 26542970
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttattcattttcataaattgtttt 213  Q
    |||||||| ||| ||||||||||  ||||||||||||||| |||| |||| ||||| |||||||    
T  26543033 ataaactacattaacaaacttatatataatacataaaagcatatttatttgcataagttgtttt 26542970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 150 - 205
Target Start/End: Original strand, 36423007 - 36423062
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttattcattttcataa 205  Q
    ||||||||  || |||||||||||||||||| ||||||||||||| |||| |||||    
T  36423007 ataaactaccttaacaaacttatgaataataaataaaagcttatttatttgcataa 36423062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 150 - 213
Target Start/End: Original strand, 46501027 - 46501090
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttattcattttcataaattgtttt 213  Q
    |||||||| | |||||| ||||| ||||||||| ||||||| ||| |||| |||||||||||||    
T  46501027 ataaactacaatgacaagcttataaataatacaaaaaagctcatttatttacataaattgtttt 46501090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 150 - 205
Target Start/End: Original strand, 51409733 - 51409788
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttattcattttcataa 205  Q
    |||||||| ||| |||||||||||||||||||||| || |||||| |||| |||||    
T  51409733 ataaactacatttacaaacttatgaataatacatacaaacttatttatttgcataa 51409788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 150 - 188
Target Start/End: Complemental strand, 39941501 - 39941463
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaag 188  Q
    ||||||||| ||||||| |||||||||||||||||||||    
T  39941501 ataaactattttgacaagcttatgaataatacataaaag 39941463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 246
Target Start/End: Original strand, 1565408 - 1565502
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttattcattttcataaattgttttgcataaacccaaaagtaagtcaattcaaatggg 246  Q
    ||||||||  ||||||| |||| ||||||| ||||||||||| || |||| |||||  |||||  ||||| | || |||||||||||| ||||||||    
T  1565408 ataaactaccttgacaagcttacgaataatgcataaaagcttgtttatttacataagctgttt--cataagctcagaagtaagtcaatccaaatggg 1565502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 219
Target Start/End: Complemental strand, 15631964 - 15631895
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttattcattttcataaattgttttgcataa 219  Q
    ||||| || ||| |||||||||| |||||||||||||| |||||| ||||  |||| |||||||| ||||    
T  15631964 ataaaatacattaacaaacttataaataatacataaaaacttatttatttgtataagttgttttgtataa 15631895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 199
Target Start/End: Complemental strand, 26988208 - 26988159
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttattcattt 199  Q
    ||||||||  ||||||| ||||||||||| ||||||||||||||| ||||    
T  26988208 ataaactaccttgacaagcttatgaataagacataaaagcttatttattt 26988159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 163 - 199
Target Start/End: Original strand, 16889004 - 16889040
Alignment:
Q  163 acaaacttatgaataatacataaaagcttattcattt 199  Q
    |||| ||||||||||||||||||||||||||| ||||    
T  16889004 acaagcttatgaataatacataaaagcttatttattt 16889040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 242
Target Start/End: Complemental strand, 19284956 - 19284864
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttattcattttcataaattgttttgcataaacccaaaagtaagtcaattcaaa 242  Q
    ||||| ||| || |||||||||| |||||||||||| |||||||| ||||  ||||  ||||||  |||| | | ||||||||| ||||||||    
T  19284956 ataaaatatcttaacaaacttataaataatacataatagcttatttatttatataagctgttttatataagctctaaagtaagttaattcaaa 19284864  T

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Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 171 - 219
Target Start/End: Original strand, 46689597 - 46689645
Alignment:
Q  171 atgaataatacataaaagcttattcattttcataaattgttttgcataa 219  Q
    |||||||||| |||||||||| || |||| |||||| ||||||||||||    
T  46689597 atgaataataaataaaagcttttttatttgcataaactgttttgcataa 46689645  T

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Target: scaffold0157 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 160 - 215
Target Start/End: Complemental strand, 24795 - 24740
Alignment:
Q  160 ttgacaaacttatgaataatacataaaagcttattcattttcataaattgttttgc 215  Q
    ||||||| ||||||||||||||||||||||||||| |||| |||||  ||||||||    
T  24795 ttgacaagcttatgaataatacataaaagcttatttatttgcataagctgttttgc 24740  T

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Target: scaffold0332 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0332
Description:

Target: scaffold0332; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 150 - 199
Target Start/End: Original strand, 14772 - 14821
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttattcattt 199  Q
    |||||||| ||| | |||||||||||||||||||||||||||||| ||||    
T  14772 ataaactacatttaaaaacttatgaataatacataaaagcttatttattt 14821  T

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Target: scaffold1088 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold1088
Description:

Target: scaffold1088; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 238
Target Start/End: Complemental strand, 1354 - 1266
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttattcattttcataaattgttttgcataaacccaaaagtaagtcaatt 238  Q
    ||||||||  || |||||||||| ||||||| || ||  ||||||||||| ||||| ||||||||||||| | | ||| ||||||||||    
T  1354 ataaactaccttaacaaacttataaataatatattaatccttattcatttgcataagttgttttgcataagctctaaaataagtcaatt 1266  T

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Target: scaffold0012 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 165 - 212
Target Start/End: Complemental strand, 178545 - 178498
Alignment:
Q  165 aaacttatgaataatacataaaagcttattcattttcataaattgttt 212  Q
    |||||||| ||||||||||||||||||||| |||| ||||| ||||||    
T  178545 aaacttataaataatacataaaagcttatttatttgcataagttgttt 178498  T

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Target: scaffold0048 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 199
Target Start/End: Original strand, 58894 - 58943
Alignment:
Q  150 ataaactatattgacaaacttatgaataatacataaaagcttattcattt 199  Q
    |||||||| ||||||||||||| |||||||||||||| | ||||| ||||    
T  58894 ataaactacattgacaaacttaagaataatacataaacgtttatttattt 58943  T

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Target: scaffold1367 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold1367
Description:

Target: scaffold1367; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 163 - 219
Target Start/End: Complemental strand, 1105 - 1049
Alignment:
Q  163 acaaacttatgaataatacataaaagcttattcattttcataaattgttttgcataa 219  Q
    |||| |||||| |||||| ||||||||||||| |||| ||||| |||||||| ||||    
T  1105 acaatcttatggataataaataaaagcttatttatttgcataagttgttttgtataa 1049  T

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